EWM28526.1, cds2125 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28526.1 vs. NCBI_GenBank
Match: gi|585110944|gb|EWM28526.1| (dna repair and transcription protein [Nannochloropsis gaditana]) HSP 1 Score: 2832.36 bits (7341), Expect = 0.000e+0 Identity = 1403/1403 (100.00%), Postives = 1403/1403 (100.00%), Query Frame = 0
Query: 1 MASLTFNSTVDGGGYESTKESIKEASSPPFSTSSSFAEALSSYCNAGDAAAASNGEGEAVPPNVTSPDATVAHLNTILLHVQRSKRFEDLVAEMGPYLTNEAASVRTRSATLLGEVLYRLPSLPLTDAAVHHYVEFFSSRLEDFPSVAGSLLGIRALLQHHKEPAQKEAGIIARGLFKHLYVPSMTQTIRQRTFEVVFEMIGALNGAEDTEGECNATTSGAAVPASLLDMQDEFVTGVIECIEGEKDPRCLILCLNIISRVQVIFPAASDAHIEALFDITACYFPITFTPPPNDPYGITPDVLSHALREALTRRPSMAEFLLPLLVDKLTSTHVPAKLEALLTLQVATRTIGMRAMLGNLASVTGALFQEIVSCAEAPVVAAALETCRSLAAHLSCLEDAGRGTTGGKPRSKAYANPRESKEGEGSGRSEKAGAGEGGRAQNKGGDRADAEMEKAWQTVLVNIVGKAASEVKANPDSMKGRASARVLGAVARASARAYAAVLKAIVPGALQLATEGKKAKPGRMVVEGEGERQEAALLLLVDLVEAVDPDLDFTASAHGPPLAPYVPLLHGRFLACLNSPASGPALLAVKGLASLATRSPSQLLTSAQASELVVLFTHRIQAEERSVGPAYDRNLDQALLEALKVLSARRQELRATVVEHTVPELLRWLDEAAAGRGVSGSTAHGKENGNGRADLDSKDVGQSSRPSRKEGVSAGRIDDSTVVNKGKCNVECGINSLELDRCLGALAFLADQTEIFEAVLPSLLARVLVAQNMSDTAEDKHRNDMGGWTSWTLRTEEEARHILSSLAAILVRTSAINQAALPGLLGLPELASSKKAEPGQVEAMDVQESLLPVATERGPWLWWLLTGVLGSAAAGKILDDAALDAIVRMMSAVTEALSRRSQDLLTERLLRFFFPFPPSSSPAAPFVRTSTSTPSRFGIVDPDPPDAATFSIPGFQPLDPSSHRSQGQAVTILLTVLNSLHVDSTIFDSLGLEQDLLPALVNLTLLDAEGLGVVEHRTESTSIASVNDSRAHPPLASEGPAPASWGVALIANKAAKPRFVEVFVAPLLSQLRQRLAAEERKSHSSTESLATATRDVSSVVWLAKALALRCVPKGALEDAISLLIDVAGCTMLEGKQVPEKNKIAEEATPARLVLARRASEGFGLILRDSSLTEGTARECLPSFSSLTTFSCPIPLANQLLTARLNTARVNPLWRQRLYNVSFTRLREAVERHRANPQAQSAALLALCNMLGSLPPPIIQQDMEPIIRVVLQGMSCVATRGKGEGADDDKDTEEEAAAVLRARATETFVALAKESLDAVMPHLSTVIPLLCKLCTLADPHFLPTARLRVLALGSLLEITRLPYAKLHPYRTSVSRGLLAPLDDRKRVVRQMAVKVRNEWLVMDR 1403
MASLTFNSTVDGGGYESTKESIKEASSPPFSTSSSFAEALSSYCNAGDAAAASNGEGEAVPPNVTSPDATVAHLNTILLHVQRSKRFEDLVAEMGPYLTNEAASVRTRSATLLGEVLYRLPSLPLTDAAVHHYVEFFSSRLEDFPSVAGSLLGIRALLQHHKEPAQKEAGIIARGLFKHLYVPSMTQTIRQRTFEVVFEMIGALNGAEDTEGECNATTSGAAVPASLLDMQDEFVTGVIECIEGEKDPRCLILCLNIISRVQVIFPAASDAHIEALFDITACYFPITFTPPPNDPYGITPDVLSHALREALTRRPSMAEFLLPLLVDKLTSTHVPAKLEALLTLQVATRTIGMRAMLGNLASVTGALFQEIVSCAEAPVVAAALETCRSLAAHLSCLEDAGRGTTGGKPRSKAYANPRESKEGEGSGRSEKAGAGEGGRAQNKGGDRADAEMEKAWQTVLVNIVGKAASEVKANPDSMKGRASARVLGAVARASARAYAAVLKAIVPGALQLATEGKKAKPGRMVVEGEGERQEAALLLLVDLVEAVDPDLDFTASAHGPPLAPYVPLLHGRFLACLNSPASGPALLAVKGLASLATRSPSQLLTSAQASELVVLFTHRIQAEERSVGPAYDRNLDQALLEALKVLSARRQELRATVVEHTVPELLRWLDEAAAGRGVSGSTAHGKENGNGRADLDSKDVGQSSRPSRKEGVSAGRIDDSTVVNKGKCNVECGINSLELDRCLGALAFLADQTEIFEAVLPSLLARVLVAQNMSDTAEDKHRNDMGGWTSWTLRTEEEARHILSSLAAILVRTSAINQAALPGLLGLPELASSKKAEPGQVEAMDVQESLLPVATERGPWLWWLLTGVLGSAAAGKILDDAALDAIVRMMSAVTEALSRRSQDLLTERLLRFFFPFPPSSSPAAPFVRTSTSTPSRFGIVDPDPPDAATFSIPGFQPLDPSSHRSQGQAVTILLTVLNSLHVDSTIFDSLGLEQDLLPALVNLTLLDAEGLGVVEHRTESTSIASVNDSRAHPPLASEGPAPASWGVALIANKAAKPRFVEVFVAPLLSQLRQRLAAEERKSHSSTESLATATRDVSSVVWLAKALALRCVPKGALEDAISLLIDVAGCTMLEGKQVPEKNKIAEEATPARLVLARRASEGFGLILRDSSLTEGTARECLPSFSSLTTFSCPIPLANQLLTARLNTARVNPLWRQRLYNVSFTRLREAVERHRANPQAQSAALLALCNMLGSLPPPIIQQDMEPIIRVVLQGMSCVATRGKGEGADDDKDTEEEAAAVLRARATETFVALAKESLDAVMPHLSTVIPLLCKLCTLADPHFLPTARLRVLALGSLLEITRLPYAKLHPYRTSVSRGLLAPLDDRKRVVRQMAVKVRNEWLVMDR
Sbjct: 1 MASLTFNSTVDGGGYESTKESIKEASSPPFSTSSSFAEALSSYCNAGDAAAASNGEGEAVPPNVTSPDATVAHLNTILLHVQRSKRFEDLVAEMGPYLTNEAASVRTRSATLLGEVLYRLPSLPLTDAAVHHYVEFFSSRLEDFPSVAGSLLGIRALLQHHKEPAQKEAGIIARGLFKHLYVPSMTQTIRQRTFEVVFEMIGALNGAEDTEGECNATTSGAAVPASLLDMQDEFVTGVIECIEGEKDPRCLILCLNIISRVQVIFPAASDAHIEALFDITACYFPITFTPPPNDPYGITPDVLSHALREALTRRPSMAEFLLPLLVDKLTSTHVPAKLEALLTLQVATRTIGMRAMLGNLASVTGALFQEIVSCAEAPVVAAALETCRSLAAHLSCLEDAGRGTTGGKPRSKAYANPRESKEGEGSGRSEKAGAGEGGRAQNKGGDRADAEMEKAWQTVLVNIVGKAASEVKANPDSMKGRASARVLGAVARASARAYAAVLKAIVPGALQLATEGKKAKPGRMVVEGEGERQEAALLLLVDLVEAVDPDLDFTASAHGPPLAPYVPLLHGRFLACLNSPASGPALLAVKGLASLATRSPSQLLTSAQASELVVLFTHRIQAEERSVGPAYDRNLDQALLEALKVLSARRQELRATVVEHTVPELLRWLDEAAAGRGVSGSTAHGKENGNGRADLDSKDVGQSSRPSRKEGVSAGRIDDSTVVNKGKCNVECGINSLELDRCLGALAFLADQTEIFEAVLPSLLARVLVAQNMSDTAEDKHRNDMGGWTSWTLRTEEEARHILSSLAAILVRTSAINQAALPGLLGLPELASSKKAEPGQVEAMDVQESLLPVATERGPWLWWLLTGVLGSAAAGKILDDAALDAIVRMMSAVTEALSRRSQDLLTERLLRFFFPFPPSSSPAAPFVRTSTSTPSRFGIVDPDPPDAATFSIPGFQPLDPSSHRSQGQAVTILLTVLNSLHVDSTIFDSLGLEQDLLPALVNLTLLDAEGLGVVEHRTESTSIASVNDSRAHPPLASEGPAPASWGVALIANKAAKPRFVEVFVAPLLSQLRQRLAAEERKSHSSTESLATATRDVSSVVWLAKALALRCVPKGALEDAISLLIDVAGCTMLEGKQVPEKNKIAEEATPARLVLARRASEGFGLILRDSSLTEGTARECLPSFSSLTTFSCPIPLANQLLTARLNTARVNPLWRQRLYNVSFTRLREAVERHRANPQAQSAALLALCNMLGSLPPPIIQQDMEPIIRVVLQGMSCVATRGKGEGADDDKDTEEEAAAVLRARATETFVALAKESLDAVMPHLSTVIPLLCKLCTLADPHFLPTARLRVLALGSLLEITRLPYAKLHPYRTSVSRGLLAPLDDRKRVVRQMAVKVRNEWLVMDR 1403
BLAST of EWM28526.1 vs. NCBI_GenBank
Match: gi|553194981|ref|XP_005856066.1| (dna repair and transcription protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292986|gb|EKU20287.1| dna repair and transcription protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 639.417 bits (1648), Expect = 0.000e+0 Identity = 316/318 (99.37%), Postives = 317/318 (99.69%), Query Frame = 0
Query: 1086 TESLATATRDVSSVVWLAKALALRCVPKGALEDAISLLIDVAGCTMLEGKQVPEKNKIAEEATPARLVLARRASEGFGLILRDSSLTEGTARECLPSFSSLTTFSCPIPLANQLLTARLNTARVNPLWRQRLYNVSFTRLREAVERHRANPQAQSAALLALCNMLGSLPPPIIQQDMEPIIRVVLQGMSCVATRGKGEGADDDKDTEEEAAAVLRARATETFVALAKESLDAVMPHLSTVIPLLCKLCTLADPHFLPTARLRVLALGSLLEITRLPYAKLHPYRTSVSRGLLAPLDDRKRVVRQMAVKVRNEWLVMDR 1403
TESLATATRDVSSVVWLAKALALRCVPKGALEDAISLLIDVAGCTMLEGKQVPEKNKIAEEATPARLVLARRASEGFGLILRDSSLTEGTARE LPSFSSLTTFSCPIPLANQLLTARLNTARVNPLWRQRLYNVSFTRLREAVERHRANPQAQSAALLALCNMLGSLPPPIIQQDMEPI+RVVLQGMSCVATRGKGEGADDDKDTEEEAAAVLRARATETFVALAKESLDAVMPHLSTVIPLLCKLCTLADPHFLPTARLRVLALGSLLEITRLPYAKLHPYRTSVSRGLLAPLDDRKRVVRQMAVKVRNEWLVMDR
Sbjct: 1 TESLATATRDVSSVVWLAKALALRCVPKGALEDAISLLIDVAGCTMLEGKQVPEKNKIAEEATPARLVLARRASEGFGLILRDSSLTEGTARESLPSFSSLTTFSCPIPLANQLLTARLNTARVNPLWRQRLYNVSFTRLREAVERHRANPQAQSAALLALCNMLGSLPPPIIQQDMEPIMRVVLQGMSCVATRGKGEGADDDKDTEEEAAAVLRARATETFVALAKESLDAVMPHLSTVIPLLCKLCTLADPHFLPTARLRVLALGSLLEITRLPYAKLHPYRTSVSRGLLAPLDDRKRVVRQMAVKVRNEWLVMDR 318
BLAST of EWM28526.1 vs. NCBI_GenBank
Match: gi|953495659|emb|CEG42555.1| (DNA repair/transcription protein Mms19 [Plasmopara halstedii]) HSP 1 Score: 278.485 bits (711), Expect = 2.915e-73 Identity = 356/1373 (25.93%), Postives = 580/1373 (42.24%), Query Frame = 0
Query: 74 LNTILLHVQRSKRFEDLVAEMGPYLTNEAASVRTRSATLLGEVLYRLPSLPLTDAAVHHYVEFFSSRLEDFPSVAGSLLGIRALLQHH--KEPAQKEAGIIARGLFKHLYVPSMTQTIRQRTFEVVFEMIGALNGAEDTEGECNATTSGAAVPASLLD--MQDE-----FVTGVIECIEGEKDPRCLILCLNI----ISRVQVIFPAASDAHIEALFDITACYFPITFTPPPNDPYGITPDVLSHALREALTRRPSMAEFLLPLLVDKLTSTHVPAKLEALLTLQVATRTIGMRAMLGNLASVTGALFQEIVSCAEAPVVAAALETCRSLAAHLSCLEDAGRGTTGGKPRSKAYANPRESKEGEGSGRSEKAGAGEGGRAQNKGGDRADAEMEKAWQTVLVNIVGKAASEVKAN-PDSMKGRASARVLGAVARASARAYAAVLKAIVPGALQLATEGKKAKPGRMVVEGEGERQEAALLLLVDLVEAVDPDLDFTASAHGPPLAPYVPLLHGRFLACL-----NSPASGPA----LLAVKGLASLATRSPSQLLTSAQASELVVLFTHRIQAEERSVGPAYD-RNLDQALLEALKVLSARRQELRATVVE----HTVPELLRWLDEAAAGRGVSGSTAHGKENGNGRADLDSKDVGQSSRPSRKEGVSAGRIDDSTVVNKGKCNVECGINSLELDRCLGALAFLADQTEIFEAVLPSLLARVLVAQNMSDTAEDKHRNDMGGWTSWTLRTEEEARHILSSLAAILVRTSAINQAALPGLLGLPELASSKKAEPGQVEAMDVQESLLPVATERGPWLWWLLTGVLGSAAAGKIL---------DDAALDAIVRMMSAVTEALSRRSQDLLTERLLRFFFPFPPSSSPAAPFVRTSTSTPSRFGIVDPDPPDAATFSIPGFQPLDPSSHRSQGQAVTILLTVLNSLHVDSTIFDSLGLEQDLLPALVNLTLLDAEGLGVVEHRTESTSIASVNDSRAHPPLASEGPAPASWGVALIANKAAKPRFVEVFVAPLLSQLRQRLAAEERKSHSSTESLATATRDVSSVVWLAKALALRCVPKGALEDAISLLIDVAGCTML--EGKQVPEKNKIAEE------ATPARLVLARRASEGFGLILRDSSLTEGTARECLPSFSSLTTFSCPIPLANQLLTARLNTARVNPLWRQRLYNVSFTRLREAVERHRANPQAQSAALLALCNMLGSLPPPIIQQDMEPIIRVVLQGMSCVATRGKGEGADDDKDTEEEAAAVLRARATETFVALAKESLDAVMPHLSTVIPLLCKLCTLADPHFLPTARLRVLALGSLLEITRLPYAKLHPYRTSVSRGLLAPLDDRKRVVRQMAVKVRNEWLVM 1401
LNT+++ V R E L+ +G +LT+ VR+R+ LL EVL RLP L L +AV + FF+ RL DFPS + L G+ AL HH + P+ + + L L++P + Q +R+ F++ F + L E N+ T+ +++D Q+E F + +EGEKDPR L+LC+++ +S+++++F + + ++ FDI +CYFPI F PPPNDPYGIT D L +LR A +A F++P L+ KL+ST AKL+A+ TL + +L + ++T AL+ E++ + V+A AL+ +G R+K P GA AW+ +V + +A E++ + DSM ++ +VL A+ R S+ ++A VL+ +P L + K G E R EAAL ++ LV+++D ++D S P+ PY P+L + L N+ SG + +AV+ L L T PS ++ Q LV LFT + + PA + RN+ L++LK +S E T + T ++ E + R ++ A N +G D D+ DV S ++ NSL D L A+ L ++ +F+A + L+ ++ +D+ + D+G + + T + RH+ L A+ A + G ++M++ + ++ ++ LLT V SA L D+A L A R+ AV + +S +Q +RL+ P F+RT S P+ Q V + V+NS+ + TI D L ++N L A+ V +S + ++ S+ A+ +A I NK + V L L Q+LAA K S ESL + W+ KAL LR A E + L C L EG+++ + EE A R+ +AR F L++ D + R+C A V L+RQR++NV F L + ++ H+ + AA++AL ++ P + + I +++ + DD++ L + A +TF L ES+++ P L V P L K F A+ R AL L ++ +PY +HPY++ V + LL LDDRKR+VR MAV+VRN+W ++
Sbjct: 29 LNTVIMQVHRQVTIEALIQALGVHLTSGDDKVRSRATLLLAEVLTRLPELQLMPSAVQLLLNFFADRLADFPSASACLRGLLALETHHAAQIPSPRTTISLMVKLGSILHIPQLGQAMRKMCFDL-FNL--TLAQPMVIELLRNSVTADRNTQDTMVDDAKQNEDFGRQFTQTFLTAMEGEKDPRNLLLCMHVARTLLSQLELVF-SCNTLLLQQYFDIVSCYFPIIFAPPPNDPYGITSDSLILSLRHAFAASDLLAPFVVPFLLKKLSSTVAEAKLDAIQTLVFCAERYSINVLLLQIEAITIALYDEVLDGGKQEVIAEALQAISRF--------------SGVVARAKTQEIP---------------GAT------------------YAWRLFVVEMTARAVGELRGHAADSMVSVSAGQVLAALGRESSLSFAHVLQIAIP---LLIEQFKIESTGS---GSETSRCEAALGRILLLVDSIDREID--QSCQAQPMRPYAPVLINALVTFLGGDEDNAMESGTSPTARCVAVEALCHLLTFPPSPIVDVMQVRTLVTLFTRMLL-----LDPALEVRNV---CLQSLKGISTVLTENSITTISPGELSTHSGYAVFVVEISLARLMATVNACAC-NADGN-DEDNADVSAIISASNRD-----------------------FNSL-FDEVLVAITELCRESSVFQATIVHLI-------DLCVERDDRKQTDIGFYEADGDDTRQ--RHLNRILEAV---------------------AEIVEINNGDRKSMEICVN----SSSSTSIIFRLLTAVETSATRATALTGNDKLSFVDNAKLSACARIFRAVMQNVSSATQ----QRLIDTMVP---------AFLRTQPSEPAFI------------------------------QLVPLFAAVINSVARNVTILD--------LSLVINRLLELAQSCAVAVLEAKSHQLQNI---------FSDAADSAAKALASIVNKMPDGADFDSTVNML---LYQKLAAVISK---SVESLTVRVAALQIYAWIVKALVLRGNTIHAAE-CLRFL-----CNFLTPEGRKIDSYVNMEEECANDAQAAALRMEVAR----TFKLLVSDYP--DVLNRKC--------------------------GAIVMFLYRQRMFNVVFPMLLDYIQFHKGE-ETSVAAMVALAQVIAHSPKTVYLPHLAQIFPLMVHALKT-----------DDRE--------LGSAAIQTFKLLLLESVESAKPFLKDVFPGLLK-----QAQFGLGAKDRHAALECLAKLANIPYELVHPYKSVVLQKLLLVLDDRKRLVRHMAVRVRNQWSIL 1145
BLAST of EWM28526.1 vs. NCBI_GenBank
Match: gi|301094213|ref|XP_002997950.1| (MMS19 nucleotide excision repair protein [Phytophthora infestans T30-4] >gi|262109736|gb|EEY67788.1| MMS19 nucleotide excision repair protein [Phytophthora infestans T30-4]) HSP 1 Score: 230.335 bits (586), Expect = 7.414e-58 Identity = 180/575 (31.30%), Postives = 276/575 (48.00%), Query Frame = 0
Query: 74 LNTILLHVQRSKRFEDLVAEMGPYLTNEAASVRTRSATLLGEVLYRLPSLPLTDAAVHHYVEFFSSRLEDFPSVAGSLLGIRALLQHHKEPAQKEAGIIAR--GLFKHLYVPSMTQTIRQRTFEV---------VFEMIGALNGAEDTEGECNATTSGAAVPASLLDMQDEFVTGVIECIEGEKDPRCLILCLNI----ISRVQVIFPAASDAHIEALFDITACYFPITFTPPPNDPYGITPDVLSHALREALTRRPSMAEFLLPLLVDKLTSTHVPAKLEALLTLQVATRTIGMRAMLGNLASVTGALFQEIVSCAEAPVVAAALETCRSLAAHLSCLEDAGRGTTGGKPRSKAYANPRESKEGEGSGRSEKAGAGEGGRAQNKGGDRADAEMEKAWQTVLVNIVGKAASEVKAN-PDSMKGRASARVLGAVARASARAYAAVLKAIVPGAL-QLATE--GKKAKPGRMVVEGEGERQEAALLLLVDLVEAVDPDLDFTASAHGPPLAPYVPLLHGRFLACLNS-------PASGPA--LLAVKGLASLATRSPSQLLTSAQASELVVLFTHRI 620
LNT+++ V R E L+ +G YLTN VR+R+ LL EVL RLP L LT +AV + FF+ RL DFPS + L + AL HH Q +A L K L++P + Q +R+ F++ V E++ L+ ++ +A+ A D+ + + +EGEKDPR L+LC+ + +S+++ +F + SD ++ FD+ +CYFPI FTPPPNDPYGIT + L +LR A +A +LP L+ KL ST V AKL+A+ TL + A+L + +V AL+ E++ + V+A A + +G R+KA P GA AW +V++ +AA E++ N DSM ++ +VL A+ R S+ ++A VLK VP + QL E G + P + EAAL ++ L++ +D ++D S G P+ P+ L + L+S P S P +AV+ L L T PS ++ AQ L+ LFT +
Sbjct: 57 LNTVVMQVHRHVSMEALIQALGAYLTNGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLMTFFADRLADFPSASACLRALLALETHHAAQVQSPRTTVALIPKLGKTLHIPQLGQAMRKMCFDLMQLALMQSTVVELL--LDSVPASKDAQDASVDDAEQSE---DLGRQLAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEPVF-SRSDTLLQQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDAIQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRF--------------SGVVARAKAQDTP---------------GAA------------------YAWSKFVVDMTARAAGELRENAADSMVSVSAGQVLAALGRESSMSFAHVLKIAVPLLVEQLNNESSGSDSVPSKC---------EAALARILLLIDTIDREID--QSGQGQPMRPHAAALIDALVNFLSSDHDNQTKPGSSPTARCVAVEALCHLLTFPPSPIVAPAQVKALINLFTRML 567
BLAST of EWM28526.1 vs. NCBI_GenBank
Match: gi|675165835|ref|XP_008891802.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|567993099|gb|ETL43283.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568022390|gb|ETL96464.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568107939|gb|ETN22563.1| hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|570330776|gb|ETO78724.1| hypothetical protein, variant [Phytophthora parasitica P1976] >gi|570989483|gb|ETP47703.1| hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 228.409 bits (581), Expect = 1.290e-57 Identity = 179/574 (31.18%), Postives = 276/574 (48.08%), Query Frame = 0
Query: 74 LNTILLHVQRSKRFEDLVAEMGPYLTNEAASVRTRSATLLGEVLYRLPSLPLTDAAVHHYVEFFSSRLEDFPSVAGSLLGIRALLQHHKEPAQKEAGIIAR--GLFKHLYVPSMTQTIRQRTFE----------VVFEMIGALNGAEDTEGECNATTSGAAVPASLLDMQDEFVTGVIECIEGEKDPRCLILCLNI----ISRVQVIFPAASDAHIEALFDITACYFPITFTPPPNDPYGITPDVLSHALREALTRRPSMAEFLLPLLVDKLTSTHVPAKLEALLTLQVATRTIGMRAMLGNLASVTGALFQEIVSCAEAPVVAAALETCRSLAAHLSCLEDAGRGTTGGKPRSKAYANPRESKEGEGSGRSEKAGAGEGGRAQNKGGDRADAEMEKAWQTVLVNIVGKAASEVKAN-PDSMKGRASARVLGAVARASARAYAAVLKAIVPGAL-QLATEGKKAKPGRMVVEGEGERQEAALLLLVDLVEAVDPDLDFTASAHGPPLAPYVPLLHGRFLACLNS-------PASGPA--LLAVKGLASLATRSPSQLLTSAQASELVVLFTHRI 620
LNT+++ V R E L+ +G YLT+ VR+R+ LL EVL RLP L LT +AV + FF+ RL DFPS + L + AL HH Q +A L K L++P + Q +R+ F+ VV ++ ++ ++D + +A+ A D+ +F + +EGEKDPR L+LC+ + +S+++ +F + SDA ++ FD+ +CYFPI FTPPPNDPYGIT + L +LR A +A +LP L+ KL ST V AKL+A+ TL + A+L + +V AL+ E++ + V+A A + +G R+KA P GA AW +V++ +AA E++ N DSM ++ +VL A+ R S+ ++A VLK VP + QL E + + EAAL ++ LV+ +D ++D S P+ P+ L + L+S P S P +AV+ L L T PS ++ AQ L+ LFT +
Sbjct: 29 LNTVVMQVHRQVSMEALIQALGAYLTSGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLMTFFADRLADFPSASACLRALLALETHHAAQVQSPRTTVALILKLGKTLHIPQLGQAMRKMCFDLMQLALMQPTVVELLLDSVPASKDAQ---DASVDDAEQSE---DLGRQFAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEPVF-SRSDALLQQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDAIQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRF--------------SGVVARAKAQDTP---------------GAA------------------YAWSKFVVDMTARAAGELRENAADSMVSVSAGQVLTALGRESSLSFAHVLKIAVPLLVEQLTNESSGSD-------SVSSKCEAALARILLLVDTIDREID--QSGQAQPMRPHAAALIDALVNFLSSDQDNQTNPGSSPTARCVAVEALCHLLTFPPSPIVAPAQVKALINLFTRML 539
BLAST of EWM28526.1 vs. NCBI_GenBank
Match: gi|567964392|gb|ETK89880.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|570954512|gb|ETP19769.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 228.024 bits (580), Expect = 1.488e-57 Identity = 179/574 (31.18%), Postives = 276/574 (48.08%), Query Frame = 0
Query: 74 LNTILLHVQRSKRFEDLVAEMGPYLTNEAASVRTRSATLLGEVLYRLPSLPLTDAAVHHYVEFFSSRLEDFPSVAGSLLGIRALLQHHKEPAQKEAGIIAR--GLFKHLYVPSMTQTIRQRTFE----------VVFEMIGALNGAEDTEGECNATTSGAAVPASLLDMQDEFVTGVIECIEGEKDPRCLILCLNI----ISRVQVIFPAASDAHIEALFDITACYFPITFTPPPNDPYGITPDVLSHALREALTRRPSMAEFLLPLLVDKLTSTHVPAKLEALLTLQVATRTIGMRAMLGNLASVTGALFQEIVSCAEAPVVAAALETCRSLAAHLSCLEDAGRGTTGGKPRSKAYANPRESKEGEGSGRSEKAGAGEGGRAQNKGGDRADAEMEKAWQTVLVNIVGKAASEVKAN-PDSMKGRASARVLGAVARASARAYAAVLKAIVPGAL-QLATEGKKAKPGRMVVEGEGERQEAALLLLVDLVEAVDPDLDFTASAHGPPLAPYVPLLHGRFLACLNS-------PASGPA--LLAVKGLASLATRSPSQLLTSAQASELVVLFTHRI 620
LNT+++ V R E L+ +G YLT+ VR+R+ LL EVL RLP L LT +AV + FF+ RL DFPS + L + AL HH Q +A L K L++P + Q +R+ F+ VV ++ ++ ++D + +A+ A D+ +F + +EGEKDPR L+LC+ + +S+++ +F + SDA ++ FD+ +CYFPI FTPPPNDPYGIT + L +LR A +A +LP L+ KL ST V AKL+A+ TL + A+L + +V AL+ E++ + V+A A + +G R+KA P GA AW +V++ +AA E++ N DSM ++ +VL A+ R S+ ++A VLK VP + QL E + + EAAL ++ LV+ +D ++D S P+ P+ L + L+S P S P +AV+ L L T PS ++ AQ L+ LFT +
Sbjct: 29 LNTVVMQVHRQVSMEALIQALGAYLTSGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLMTFFADRLADFPSASACLRALLALETHHAAQVQSPRTTVALILKLGKTLHIPQLGQAMRKMCFDLMQLALMQPTVVELLLDSVPASKDAQ---DASVDDAEQSE---DLGRQFAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEPVF-SRSDALLQQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDAIQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRF--------------SGVVARAKAQDTP---------------GAA------------------YAWSKFVVDMTARAAGELRENAADSMVSVSAGQVLTALGRESSLSFAHVLKIAVPLLVEQLTNESSGSD-------SVSSKCEAALARILLLVDTIDREID--QSGQAQPMRPHAAALIDALVNFLSSDQDNQTNPGSSPTARCVAVEALCHLLTFPPSPIVAPAQVKALINLFTRML 539
BLAST of EWM28526.1 vs. NCBI_GenBank
Match: gi|568052759|gb|ETM49626.1| (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 228.024 bits (580), Expect = 1.764e-57 Identity = 179/574 (31.18%), Postives = 276/574 (48.08%), Query Frame = 0
Query: 74 LNTILLHVQRSKRFEDLVAEMGPYLTNEAASVRTRSATLLGEVLYRLPSLPLTDAAVHHYVEFFSSRLEDFPSVAGSLLGIRALLQHHKEPAQKEAGIIAR--GLFKHLYVPSMTQTIRQRTFE----------VVFEMIGALNGAEDTEGECNATTSGAAVPASLLDMQDEFVTGVIECIEGEKDPRCLILCLNI----ISRVQVIFPAASDAHIEALFDITACYFPITFTPPPNDPYGITPDVLSHALREALTRRPSMAEFLLPLLVDKLTSTHVPAKLEALLTLQVATRTIGMRAMLGNLASVTGALFQEIVSCAEAPVVAAALETCRSLAAHLSCLEDAGRGTTGGKPRSKAYANPRESKEGEGSGRSEKAGAGEGGRAQNKGGDRADAEMEKAWQTVLVNIVGKAASEVKAN-PDSMKGRASARVLGAVARASARAYAAVLKAIVPGAL-QLATEGKKAKPGRMVVEGEGERQEAALLLLVDLVEAVDPDLDFTASAHGPPLAPYVPLLHGRFLACLNS-------PASGPA--LLAVKGLASLATRSPSQLLTSAQASELVVLFTHRI 620
LNT+++ V R E L+ +G YLT+ VR+R+ LL EVL RLP L LT +AV + FF+ RL DFPS + L + AL HH Q +A L K L++P + Q +R+ F+ VV ++ ++ ++D + +A+ A D+ +F + +EGEKDPR L+LC+ + +S+++ +F + SDA ++ FD+ +CYFPI FTPPPNDPYGIT + L +LR A +A +LP L+ KL ST V AKL+A+ TL + A+L + +V AL+ E++ + V+A A + +G R+KA P GA AW +V++ +AA E++ N DSM ++ +VL A+ R S+ ++A VLK VP + QL E + + EAAL ++ LV+ +D ++D S P+ P+ L + L+S P S P +AV+ L L T PS ++ AQ L+ LFT +
Sbjct: 29 LNTVVMQVHRQVSMEALIQALGAYLTSGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLMTFFADRLADFPSASACLRALLALETHHAAQVQSPRTTVALILKLGKTLHIPQLGQAMRKMCFDLMQLALMQPTVVELLLDSVPASKDAQ---DASVDDAEQSE---DLGRQFAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEPVF-SRSDALLQQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDAIQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRF--------------SGVVARAKAQDTP---------------GAA------------------YAWSKFVVDMTARAAGELRENAADSMVSVSAGQVLTALGRESSLSFAHVLKIAVPLLVEQLTNESSGSD-------SVSSKCEAALARILLLVDTIDREID--QSGQAQPMRPHAAALIDALVNFLSSDQDNQTNPGSSPTARCVAVEALCHLLTFPPSPIVAPAQVKALINLFTRML 539
BLAST of EWM28526.1 vs. NCBI_GenBank
Match: gi|1214705340|gb|OWZ17052.1| (MMS19 nucleotide excision repair protein [Phytophthora megakarya]) HSP 1 Score: 229.18 bits (583), Expect = 2.021e-57 Identity = 183/574 (31.88%), Postives = 274/574 (47.74%), Query Frame = 0
Query: 74 LNTILLHVQRSKRFEDLVAEMGPYLTNEAASVRTRSATLLGEVLYRLPSLPLTDAAVHHYVEFFSSRLEDFPSVAGSLLGIRALLQHH----KEPAQKEAGIIARGLFKHLYVPSMTQTIRQRTFEVVFEMIGALNGAEDTEGEC---NATTSGAAVPASLLDMQD------EFVTGVIECIEGEKDPRCLILCLNI----ISRVQVIFPAASDAHIEALFDITACYFPITFTPPPNDPYGITPDVLSHALREALTRRPSMAEFLLPLLVDKLTSTHVPAKLEALLTLQVATRTIGMRAMLGNLASVTGALFQEIVSCAEAPVVAAALETCRSLAAHLSCLEDAGRGTTGGKPRSKAYANPRESKEGEGSGRSEKAGAGEGGRAQNKGGDRADAEMEKAWQTVLVNIVGKAASEVKAN-PDSMKGRASARVLGAVARASARAYAAVLKAIVPGAL-QLATE--GKKAKPGRMVVEGEGERQEAALLLLVDLVEAVDPDLDFTASAHGPPLAPYVPLLHGRFLACLNSPASGPA---------LLAVKGLASLATRSPSQLLTSAQASELVVLFT 617
LNT+++ V RS E L+ +G YLT+ VR+R+ LL EVL RLP L LT +AV + FF+ RL DFPS + L + AL HH P A ++ G L++P + Q +R+ F+++ L A+ T E + SG A AS+ D + +F + +EGEKDPR L+LC+ + +S+++ +F + SDA ++ FDI +CYFPI FTPPPNDPYGIT + L +LR A +A +LP L+ KL ST V AKL+AL TL + A+L + +V AL+ E++ + V+A A + S +G RAQ+ G AW +V + +AA E++ + DSM ++ +VL A+ SA ++ VLK VP + QL E G ++ P + EAAL ++ LV +D ++D S P+ P+ P+L + L+S A +AV+ L L T PS ++ AQ L+ LFT
Sbjct: 29 LNTVVMQVHRSVSMETLIQALGAYLTSGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLLTFFADRLADFPSASACLRALLALETHHAAQVSSPRTTVALVLKLG--STLHIPQLGQAMRKMCFDLM-----QLALAQPTVAELLLDSVPPSGDAQDASVDDAEQSEDLGRQFAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEAVF-SRSDALLQQYFDIVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDALQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAI-----------------------------------------SRFSGVVARARAQDTPG------AAYAWSKFVVEMTARAAGELRQHAADSMVSVSAGQVLAALGHDSAMSFGHVLKIAVPLLVEQLENENSGSESVPSKC---------EAALARILLLVNTIDREID--QSGQAQPMRPHAPVLIDALVNFLSSDQDNQAKQGSSPTARCVAVEALCHLLTFPPSPIVAPAQVKALINLFT 536 HSP 2 Score: 92.4337 bits (228), Expect = 4.063e-15 Identity = 63/195 (32.31%), Postives = 95/195 (48.72%), Query Frame = 0
Query: 1207 ARVNPLWRQRLYNVSFTRLREAVERHRANPQAQSAALLALCNMLGSLPPPIIQQDMEPIIRVVLQGMSCVATRGKGEGADDDKDTEEEAAAVLRARATETFVALAKESLDAVMPHLSTVIPLLCKLCTLADPHFLPTARLRVLALGSLLEITRLPYAKLHPYRTSVSRGLLAPLDDRKRVVRQMAVKVRNEWLVM 1401
A + L+RQR++++ F L E + H AAL+A ++ P I + I +++Q ++ DD + L + A +TF L ES++ P L V P L K F AR R AL L ++ +PY +HPY+ +V R LL LDDRKR+VR MAV+VRN+W ++
Sbjct: 973 AFITFLYRQRMFDLVFPVLLEYIRVHIGQ-DISVAALVAFAQVIAHSPKAIYMPHLAQIFPLMVQALNT-----------DDHE--------LGSAAIQTFKPLLMESVETAKPFLKDVFPGLLK-----QAQFGSGARDRYAALECLAKLATIPYELVHPYKDTVLRKLLLVLDDRKRLVRHMAVRVRNQWSIL 1142
BLAST of EWM28526.1 vs. NCBI_GenBank
Match: gi|970632213|gb|KUF78558.1| (MMS19 nucleotide excision repair protein [Phytophthora nicotianae]) HSP 1 Score: 227.639 bits (579), Expect = 4.036e-57 Identity = 179/574 (31.18%), Postives = 276/574 (48.08%), Query Frame = 0
Query: 74 LNTILLHVQRSKRFEDLVAEMGPYLTNEAASVRTRSATLLGEVLYRLPSLPLTDAAVHHYVEFFSSRLEDFPSVAGSLLGIRALLQHHKEPAQKEAGIIAR--GLFKHLYVPSMTQTIRQRTFE----------VVFEMIGALNGAEDTEGECNATTSGAAVPASLLDMQDEFVTGVIECIEGEKDPRCLILCLNI----ISRVQVIFPAASDAHIEALFDITACYFPITFTPPPNDPYGITPDVLSHALREALTRRPSMAEFLLPLLVDKLTSTHVPAKLEALLTLQVATRTIGMRAMLGNLASVTGALFQEIVSCAEAPVVAAALETCRSLAAHLSCLEDAGRGTTGGKPRSKAYANPRESKEGEGSGRSEKAGAGEGGRAQNKGGDRADAEMEKAWQTVLVNIVGKAASEVKAN-PDSMKGRASARVLGAVARASARAYAAVLKAIVPGAL-QLATEGKKAKPGRMVVEGEGERQEAALLLLVDLVEAVDPDLDFTASAHGPPLAPYVPLLHGRFLACLNS-------PASGPA--LLAVKGLASLATRSPSQLLTSAQASELVVLFTHRI 620
LNT+++ V R E L+ +G YLT+ VR+R+ LL EVL RLP L LT +AV + FF+ RL DFPS + L + AL HH Q +A L K L++P + Q +R+ F+ VV ++ ++ ++D + +A+ A D+ +F + +EGEKDPR L+LC+ + +S+++ +F + SDA ++ FD+ +CYFPI FTPPPNDPYGIT + L +LR A +A +LP L+ KL ST V AKL+A+ TL + A+L + +V AL+ E++ + V+A A + +G R+KA P GA AW +V++ +AA E++ N DSM ++ +VL A+ R S+ ++A VLK VP + QL E + + EAAL ++ LV+ +D ++D S P+ P+ L + L+S P S P +AV+ L L T PS ++ AQ L+ LFT +
Sbjct: 29 LNTVVMQVHRQVSMEALIQALGAYLTSGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLMTFFADRLADFPSASACLRALLALETHHAAQVQSPRTTVALILKLGKTLHIPQLGQAMRKMCFDLMQLALMQPTVVELLLDSVPASKDAQ---DASVDDAEQSE---DLGRQFAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEPVF-SRSDALLQQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDAIQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRF--------------SGVVARAKAQDTP---------------GAA------------------YAWSKFVVDMTARAAGELRENAADSMVSVSAGQVLTALGRESSLSFAHVLKIAVPLLVEQLTNESSGSD-------SVSSKCEAALARILLLVDTIDREID--QSGQAQPMRPHAAALIDALVNFLSSDQDNQTNPGSSPTARCVAVEALCHLLTFPPSPIVAPAQVKALINLFTRML 539
BLAST of EWM28526.1 vs. NCBI_GenBank
Match: gi|970664073|gb|KUG01094.1| (MMS19 nucleotide excision repair protein [Phytophthora nicotianae]) HSP 1 Score: 227.254 bits (578), Expect = 4.558e-57 Identity = 179/573 (31.24%), Postives = 275/573 (47.99%), Query Frame = 0
Query: 74 LNTILLHVQRSKRFEDLVAEMGPYLTNEAASVRTRSATLLGEVLYRLPSLPLTDAAVHHYVEFFSSRLEDFPSVAGSLLGIRALLQHHKEPAQKEAGIIAR--GLFKHLYVPSMTQTIRQRTFEV---------VFEMIGALNGAEDTEGECNATTSGAAVPASLLDMQDEFVTGVIECIEGEKDPRCLILCLNI----ISRVQVIFPAASDAHIEALFDITACYFPITFTPPPNDPYGITPDVLSHALREALTRRPSMAEFLLPLLVDKLTSTHVPAKLEALLTLQVATRTIGMRAMLGNLASVTGALFQEIVSCAEAPVVAAALETCRSLAAHLSCLEDAGRGTTGGKPRSKAYANPRESKEGEGSGRSEKAGAGEGGRAQNKGGDRADAEMEKAWQTVLVNIVGKAASEVKAN-PDSMKGRASARVLGAVARASARAYAAVLKAIVPGAL-QLATEGKKAKPGRMVVEGEGERQEAALLLLVDLVEAVDPDLDFTASAHGPPLAPYVPLLHGRFLACLNS-------PASGPA--LLAVKGLASLATRSPSQLLTSAQASELVVLFTHRI 620
LNT+++ V R E L+ +G YLT+ VR+R+ LL EVL RLP L LT +AV + FF+ RL DFPS + L + AL HH Q +A L K L++P + Q +R+ F++ V E++ L+ ++ +A+ A D+ +F + +EGEKDPR L+LC+ + +S+++ +F + SDA ++ FD+ +CYFPI FTPPPNDPYGIT + L +LR A +A +LP L+ KL ST V AKL+A+ TL + A+L + +V AL+ E++ + V+A A + +G R+KA P GA AW +V++ +AA E++ N DSM ++ +VL A+ R S+ ++A VLK VP + QL E + + EAAL ++ LV+ +D ++D S P+ P+ L + L+S P S P +AV+ L L T PS ++ AQ L+ LFT +
Sbjct: 29 LNTVVMQVHRQVSMEALIQALGAYLTSGDDKVRSRATLLLAEVLTRLPELQLTPSAVQLLMTFFADRLADFPSASACLRALLALETHHAAQVQSPRTTVALILKLGKTLHIPQLGQAMRKMCFDLMQLALMQPTVVELL--LDSVPASKDAQDASVDDAEQSE---DLGRQFAQTFLSAMEGEKDPRNLLLCMQVARTLLSKLEPVF-SRSDALLQQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDAIQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRF--------------SGVVARAKAQDTP---------------GAA------------------YAWSKFVVDMTARAAGELRENAADSMVSVSAGQVLTALGRESSLSFAHVLKIAVPLLVEQLTNESSGSD-------SVSSKCEAALARILLLVDTIDREID--QSGQAQPMRPHAAALIDALVNFLSSDQDNQTNPGSSPTARCVAVEALCHLLTFPPSPIVAPAQVKALINLFTRML 539 The following BLAST results are available for this feature:
BLAST of EWM28526.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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