EWM28626.1, cds2107 (CDS) Nannochloropsis gaditana

Overview
NameEWM28626.1
Unique Namecds2107
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:921556..921790 -
Alignment locationCM002458.1:920570..921382 -
Alignment locationCM002458.1:920060..920336 -
Alignment locationCM002458.1:919705..919951 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28626.1
Productpyruvate decarboxylase
Orig transcript idgnl|cribi|Naga_100009g44.669.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:921556..921790 -
CM002458.1supercontigCM002458.1:920570..921382 -
CM002458.1supercontigCM002458.1:920060..920336 -
CM002458.1supercontigCM002458.1:919705..919951 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0000287magnesium ion binding
GO:0030976thiamine pyrophosphate binding
GO:0016831carboxy-lyase activity
Vocabulary: INTERPRO
TermDefinition
IPR011766TPP_enzyme-bd_C
IPR012000Thiamin_PyroP_enz_cen_dom
IPR029061THDP-binding
IPR012001Thiamin_PyroP_enz_TPP-bd_dom
IPR012110TPP_enzyme
IPR029035DHS-like_NAD/FAD-binding_dom
Homology
BLAST of EWM28626.1 vs. NCBI_GenBank
Match: gi|585111044|gb|EWM28626.1| (pyruvate decarboxylase [Nannochloropsis gaditana])

HSP 1 Score: 1091.64 bits (2822), Expect = 0.000e+0
Identity = 523/523 (100.00%), Postives = 523/523 (100.00%), Query Frame = 0
Query:    1 MLYFLPSKYSAISLQRYAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEEHVSLPIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGEYGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEARVAARPAETLLTMRFVHEQVQNLLTPKTALLVETGDSWFQGQTMKLPRGCGYEFQMQYGSIGWSVGAVLGYSLAAQHEGRRVVAMIGDGSFQMSAQEVSTMIRYGANPIIVLINNGGYTIEVEIHDGIYNVIKNWDYKKLIDAFCHDDGKALTICCKTQGELLEAMEQAKTHPNLVFLELILDKDDCSKHLLEWGSRVATANGRPFVEL 523
            MLYFLPSKYSAISLQRYAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEEHVSLPIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGEYGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEARVAARPAETLLTMRFVHEQVQNLLTPKTALLVETGDSWFQGQTMKLPRGCGYEFQMQYGSIGWSVGAVLGYSLAAQHEGRRVVAMIGDGSFQMSAQEVSTMIRYGANPIIVLINNGGYTIEVEIHDGIYNVIKNWDYKKLIDAFCHDDGKALTICCKTQGELLEAMEQAKTHPNLVFLELILDKDDCSKHLLEWGSRVATANGRPFVEL
Sbjct:    1 MLYFLPSKYSAISLQRYAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEEHVSLPIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGEYGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEARVAARPAETLLTMRFVHEQVQNLLTPKTALLVETGDSWFQGQTMKLPRGCGYEFQMQYGSIGWSVGAVLGYSLAAQHEGRRVVAMIGDGSFQMSAQEVSTMIRYGANPIIVLINNGGYTIEVEIHDGIYNVIKNWDYKKLIDAFCHDDGKALTICCKTQGELLEAMEQAKTHPNLVFLELILDKDDCSKHLLEWGSRVATANGRPFVEL 523          
BLAST of EWM28626.1 vs. NCBI_GenBank
Match: gi|553188824|ref|XP_005854872.1| (pyruvate decarboxylase [Nannochloropsis gaditana CCMP526] >gi|422294180|gb|EKU21480.1| pyruvate decarboxylase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1050.04 bits (2714), Expect = 0.000e+0
Identity = 503/506 (99.41%), Postives = 505/506 (99.80%), Query Frame = 0
Query:   17 YAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEEHVSLPIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGEYGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEARVAARPAETLLTMRFVHEQVQNLLTPKTALLVETGDSWFQGQTMKLPRGCGYEFQMQYGSIGWSVGAVLGYSLAAQHEGRRVVAMIGDGSFQMSAQEVSTMIRYGANPIIVLINNGGYTIEVEIHDGIYNVIKNWDYKKLIDAFCHDDGKALTICCKTQGELLEAMEQAKTHPNLVFLELILDKDDCSKHLLEWGSRVATANGRPFVE 522
            YAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGK+DRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEEHVSLPIPFQIPP KPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGEYGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEAR+AARPAETLLTMRFVHEQVQNLLTPKTALLVETGDSWFQGQTMKLPRGCGYEFQMQYGSIGWSVGAVLGYSLAAQHEGRRVVAMIGDGSFQMSAQEVSTMIRYGANPIIVLINNGGYTIEVEIHDGIYNVIKNWDYKKLIDAFCHDDGKALTICCKTQGELLEAMEQAKTHPNLVFLELILDKDDCSKHLLEWGSRVATANGRPFVE
Sbjct:   61 YAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKMDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEEHVSLPIPFQIPPRKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGEYGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEARLAARPAETLLTMRFVHEQVQNLLTPKTALLVETGDSWFQGQTMKLPRGCGYEFQMQYGSIGWSVGAVLGYSLAAQHEGRRVVAMIGDGSFQMSAQEVSTMIRYGANPIIVLINNGGYTIEVEIHDGIYNVIKNWDYKKLIDAFCHDDGKALTICCKTQGELLEAMEQAKTHPNLVFLELILDKDDCSKHLLEWGSRVATANGRPFVE 566          
BLAST of EWM28626.1 vs. NCBI_GenBank
Match: gi|585111045|gb|EWM28627.1| (pyruvate decarboxylase [Nannochloropsis gaditana])

HSP 1 Score: 685.256 bits (1767), Expect = 0.000e+0
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
Query:   17 YAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEEHVSLPIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGEYGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEARVAARPAETLLTMRFVHEQVQNLLTPKTALLVETG 349
            YAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEEHVSLPIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGEYGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEARVAARPAETLLTMRFVHEQVQNLLTPKTALLVETG
Sbjct:   61 YAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEEHVSLPIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGEYGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEARVAARPAETLLTMRFVHEQVQNLLTPKTALLVETG 393          
BLAST of EWM28626.1 vs. NCBI_GenBank
Match: gi|1072983400|ref|XP_018442241.1| (PREDICTED: pyruvate decarboxylase 4-like isoform X2 [Raphanus sativus])

HSP 1 Score: 535.798 bits (1379), Expect = 0.000e+0
Identity = 271/510 (53.14%), Postives = 354/510 (69.41%), Query Frame = 0
Query:   17 YAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNI-SEEHVSL---PIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGE-YGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEARVAARPAETLLTMRFVHEQVQNLLTPKTALLVETGDSWFQGQTMKLPRGCGYEFQMQYGSIGWSVGAVLGYSLAAQHEGRRVVAMIGDGSFQMSAQEVSTMIRYGANPIIVLINNGGYTIEVEIHDGIYNVIKNWDYKKLIDAFCHDDGKALTICCKTQGELLEAMEQA--KTHPNLVFLELILDKDDCSKHLLEWGSRVATANGRP 519
            YAADG AR  GV A VVT+TVGGLS +NAIAGAYS++LP+I I G PNSND+ ++RILHHTIG  D  Q++  F  V      + +   A  +ID AI TA+ + KPVY+ ++CN+ S  H +    P+PF + P + SN   L AAV+ TL     A KPV+V GVK+R+A+A DA +QLADA+G A+A MP AKG+ PE+HP +IGTYWG VS+    E VESAD YIF G  FNDY + GY+ L+KK+  +  + DRV    G+ +GCV M+EF   L+K + RN+ + + Y RIF P+ +  A  A   L +  + + +Q +L+ +TA++ ETGDSWF  Q ++LP+GCGYEFQMQYGSIGWSVGA LGY+ A     +RV+A IGDGSFQ++AQ+VSTM+R G   II LINNGGYTIEVEIHDG YNVIKNW+Y  L+DA  + +GK  T   + + EL+EA++ A  +   +L F+E+IL KDD SK LLEWGSRVA ANGRP
Sbjct:   97 YAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDFGTNRILHHTIGLPDFTQELRCFHTVTCYQAVVNNLEDAHEEIDKAISTALKESKPVYISISCNLASTPHPTFIRDPVPFSLTP-RSSNPMGLHAAVEATLDFLNKAVKPVMVAGVKLRVAKASDAFVQLADASGYAMAVMPSAKGLVPENHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYTSVGYSLLLKKEKAILVHPDRVTVANGQTFGCVLMSEFFTELSKRVKRNETAYENYHRIFVPQGKPIACKAREPLRVNTMFQHIQKMLSSQTAVIAETGDSWFNCQKLRLPKGCGYEFQMQYGSIGWSVGATLGYAQAVPE--KRVLAFIGDGSFQVTAQDVSTMLRNGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTALVDAIHNGEGKCWTTKVRYEAELVEAIKTATLEKKDSLCFIEVILHKDDTSKELLEWGSRVAAANGRP 603          
BLAST of EWM28626.1 vs. NCBI_GenBank
Match: gi|922557570|ref|XP_013606887.1| (PREDICTED: pyruvate decarboxylase 1-like [Brassica oleracea var. oleracea] >gi|674922890|emb|CDY10495.1| BnaCnng03960D [Brassica napus])

HSP 1 Score: 535.798 bits (1379), Expect = 0.000e+0
Identity = 273/510 (53.53%), Postives = 352/510 (69.02%), Query Frame = 0
Query:   17 YAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEE----HVSLPIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGE-YGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEARVAARPAETLLTMRFVHEQVQNLLTPKTALLVETGDSWFQGQTMKLPRGCGYEFQMQYGSIGWSVGAVLGYSLAAQHEGRRVVAMIGDGSFQMSAQEVSTMIRYGANPIIVLINNGGYTIEVEIHDGIYNVIKNWDYKKLIDAFCHDDGKALTICCKTQGELLEAMEQA--KTHPNLVFLELILDKDDCSKHLLEWGSRVATANGRP 519
            YAADG AR  GV A VVT+TVGGLS +NAIAGAYS++LP+I I G PNSND+ ++RILHHTIG  D  Q++  F  V      + +   A  QID AI TA+ + KPVY+ ++CN++       +  P+PF + P + SN   L AAV+ TL     A KPVIV GVK+R+A+A DA + LADA+G A+A MP AKG+ PE+HP +IGTYWG VS+    E VESAD YIF G  FNDY++ GY+ L+KK+  +  + DRV    G+ +GCV M+EF   LAK + RN+ + + Y RIF P+ +  A  A   L +  + + VQ +L+ +TA++ ETGDSWF  Q +KLP+GCGYEFQMQYGSIGWSVGA LGY+ A     +RV+A IGDGSFQ++AQ+VSTM+R G   II LINNGGYTIEVEIHDG YNVIKNW+Y  L+DA  + +GK  T   + + EL+EA+  A  +   +L F+E+IL KDD SK LLEWGSRVA ANGRP
Sbjct:   98 YAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDFGTNRILHHTIGLPDFTQELRCFQTVTCYQAVVNNLEDAHEQIDKAISTALKESKPVYISISCNLAATPHPTFIRDPVPFSLTP-RSSNKMGLEAAVEATLEFLNKAVKPVIVGGVKLRVAKASDAFVDLADASGYAMAVMPSAKGLVPENHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSSVGYSLLLKKEKAIVVHPDRVTVANGQTFGCVLMSEFFTELAKRVKRNETAYENYRRIFVPQGKPIACKAREPLRVNTMFQHVQKMLSSETAVIAETGDSWFNCQKLKLPQGCGYEFQMQYGSIGWSVGATLGYAQAVPE--KRVLAFIGDGSFQVTAQDVSTMLRNGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTAKVRYEEELVEAITTATLEKKDSLCFIEVILHKDDTSKELLEWGSRVAAANGRP 604          
BLAST of EWM28626.1 vs. NCBI_GenBank
Match: gi|923926618|ref|XP_013732259.1| (PREDICTED: pyruvate decarboxylase 1-like [Brassica napus])

HSP 1 Score: 534.258 bits (1375), Expect = 0.000e+0
Identity = 273/510 (53.53%), Postives = 351/510 (68.82%), Query Frame = 0
Query:   17 YAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEE----HVSLPIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGE-YGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEARVAARPAETLLTMRFVHEQVQNLLTPKTALLVETGDSWFQGQTMKLPRGCGYEFQMQYGSIGWSVGAVLGYSLAAQHEGRRVVAMIGDGSFQMSAQEVSTMIRYGANPIIVLINNGGYTIEVEIHDGIYNVIKNWDYKKLIDAFCHDDGKALTICCKTQGELLEAMEQA--KTHPNLVFLELILDKDDCSKHLLEWGSRVATANGRP 519
            YAADG AR  GV A VVT+TVGGLS +NAIAGAYS++LP+I I G PNSND+ ++RILHHTIG  D  Q++  F  V      + +   A  QID AI TA+ + KPVY+ ++CN++       +  P+PF + P + SN   L AAV+ TL     A KPVIV GVK+R+A+A DA + LADA+G A+A MP AKG+ PE+HP +IGTYWG VS+    E VESAD YIF G  FNDY++ GY+ L+KK+  +  + DRV    G+ +GCV M+EF   LAK + RN+ + + Y RIF P+ +  A  A   L +  + + VQ +L+ +TA++ ETGDSWF  Q +KLP+GCGYEFQMQYGSIGWSVGA LGYS A     +RV+A IGDGSFQ++AQ+VSTM+R G   II LINNGGYTIEVEIHDG YN IKNW+Y  L+DA  + +GK  T   + + EL+EA+  A  +   +L F+E+IL KDD SK LLEWGSRVA ANGRP
Sbjct:   98 YAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDFGTNRILHHTIGLPDFTQELRCFQTVTCYQAVVNNLEDAHEQIDKAISTALKESKPVYISISCNLAATPHPTFIRDPVPFSLTP-RSSNKMGLEAAVEATLEFLNKAVKPVIVGGVKLRVAKASDAFVDLADASGYAMAVMPSAKGLVPENHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSSVGYSLLLKKEKAIVVHPDRVTVANGQTFGCVLMSEFFTELAKRVKRNETAYENYRRIFVPQGKPIACKAREPLRVNTMFQHVQKMLSSETAVIAETGDSWFNCQKLKLPQGCGYEFQMQYGSIGWSVGATLGYSQAVPE--KRVLAFIGDGSFQVTAQDVSTMLRNGQKTIIFLINNGGYTIEVEIHDGPYNGIKNWNYTGLVDAIHNGEGKCWTAKVRYEEELVEAITTATLEKKDSLCFIEVILHKDDTSKELLEWGSRVAAANGRP 604          
BLAST of EWM28626.1 vs. NCBI_GenBank
Match: gi|1121328277|ref|WP_073636499.1| (pyruvate decarboxylase [Scytonema sp. HK-05] >gi|1115279895|gb|OKH43136.1| pyruvate decarboxylase [Scytonema sp. HK-05] >gi|1210131111|dbj|BAY50224.1| thiamine pyrophosphate protein TPP binding domain protein (plasmid) [Scytonema sp. HK-05])

HSP 1 Score: 533.872 bits (1374), Expect = 0.000e+0
Identity = 271/503 (53.88%), Postives = 342/503 (67.99%), Query Frame = 0
Query:   17 YAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEEHVSLPIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGEYGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEARVAARPAETLLTMRFVHEQVQNLLTPKTALLVETGDSWFQGQTMKLPRGCGYEFQMQYGSIGWSVGAVLGYSLAAQHEGRRVVAMIGDGSFQMSAQEVSTMIRYGANPIIVLINNGGYTIEVEIHDGIYNVIKNWDYKKLIDAFCHDDGKALTICCKTQGELLEAMEQAKTHPNLVFLELILDKDDCSKHLLEWGSRVATANGRP 519
            YAADG AR  GV+A+V+T+TVGGLS +NAIAGAY++DLP+I +SG PNSND     ++HH+IG  D  QQ  +F  + AEAV IR    A R +  A+ TA+ ++KPVY+++ACN+    +   +P Q+     SN  +L+AAV+    +   A KP +V GVK+R  EA  A  +LAD +  AVA MP+AKGMFPE HPQYIG YWG VSS G  E +ES D Y+F G  FNDY T G++ L+  + L+    DRV   G EY  V M EF  ALA  I  ND S KA+ RI    +   A   +  LT R + EQVQ +LT  +ALLVETGDSWF GQ + LP GC YEFQMQYGSIGW+VGA+LGY+LA   + +R +A+IGDGSFQ++AQEVSTMIRYG NPII LINNGGYTIEVEIHDG YN IKNWDY  L+  F   +G   +   +T GEL++A+ QA+ H  L  +E ++D+DDC+K LLEWGSRVA AN RP
Sbjct:   63 YAADGYARVRGVSAVVITFTVGGLSLVNAIAGAYAEDLPVIVLSGGPNSNDRGQHHLIHHSIGNYDFNQQYRIFREITAEAVVIRHIEDAHRLLHRALETAIQKRKPVYIEIACNLFTAPIPQSVPLQLKRHVESNPVALKAAVEAVAAKLNQAVKPALVAGVKLRAFEAIAAFHKLADCSSYAVAIMPNAKGMFPETHPQYIGCYWGQVSSPGCAEIIESCDAYLFAGPIFNDYTTVGWSSLVNPEKLIEVQPDRVILAGQEYAQVYMQEFLTALAHQIQPNDNSFKAFKRIQEQPSPPQALQNDAPLTTRVLREQVQGILTEHSALLVETGDSWFNGQKITLPDGCLYEFQMQYGSIGWAVGALLGYALALGQQ-KRAIALIGDGSFQLTAQEVSTMIRYGLNPIIFLINNGGYTIEVEIHDGPYNNIKNWDYAGLVQVFNAGEGNGWSCRVQTVGELVKAIRQAQAHEGLALIECMIDRDDCTKELLEWGSRVAAANNRP 564          
BLAST of EWM28626.1 vs. NCBI_GenBank
Match: gi|922425084|ref|XP_013618619.1| (PREDICTED: pyruvate decarboxylase 4 [Brassica oleracea var. oleracea] >gi|923637586|ref|XP_013640124.1| PREDICTED: pyruvate decarboxylase 4 [Brassica napus] >gi|674866978|emb|CDY66930.1| BnaCnng52860D [Brassica napus])

HSP 1 Score: 532.717 bits (1371), Expect = 0.000e+0
Identity = 269/510 (52.75%), Postives = 352/510 (69.02%), Query Frame = 0
Query:   17 YAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEE----HVSLPIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGE-YGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEARVAARPAETLLTMRFVHEQVQNLLTPKTALLVETGDSWFQGQTMKLPRGCGYEFQMQYGSIGWSVGAVLGYSLAAQHEGRRVVAMIGDGSFQMSAQEVSTMIRYGANPIIVLINNGGYTIEVEIHDGIYNVIKNWDYKKLIDAFCHDDGKALTICCKTQGELLEAMEQAKTHP--NLVFLELILDKDDCSKHLLEWGSRVATANGRP 519
            YAADG AR  GV A VVT+TVGGLS +NAIAGAYS++LP+I I G PNSND+ ++RILHHTIG  D  Q++  F  V      + +   A  QID AI TA+ + KPVY+ ++CN++       +  P+PF + P + SN   L AAV+ TL     A KPV+V GVK+R+A+A DA ++LADA+G A+A MP AKG+ PE HP +IGTYWG VS+    E VESAD YIF G  FNDY++ GY+ L+KK+  +  + DRV    G+ +GCV M++F   LAK + RN+ + + Y RIF PE +     A   L +  + + +Q +++ +TA++ ETGDSWF  Q +KLP+GCGYEFQMQYGSIGWSVGA LGY+ A     +RV+A IGDGSFQ++AQ+VSTM+R G   II LINNGGYTIEVEIHDG YNVIKNW+Y  L+DA  + +GK  T   + + EL+EA++ A T    +L F+E+I+ KDD SK LLEWGSRVA ANGRP
Sbjct:   97 YAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDFGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVNNLEDAHEQIDKAISTALKESKPVYISISCNLAATPHPTFIRDPVPFSLTP-RLSNKMGLEAAVEATLEFLNKAVKPVMVGGVKLRVAKASDAFVELADASGYAMAVMPSAKGLVPEHHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSSVGYSLLLKKEKAIVVHPDRVTIANGQTFGCVLMSDFFTELAKRVKRNETAYENYHRIFVPEGKPLKCKAREPLRVNAMFQHIQKMISSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQAVPE--KRVLAFIGDGSFQVTAQDVSTMLRNGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVRYEEELVEAIKTATTEKKDSLCFIEVIVHKDDTSKELLEWGSRVAAANGRP 603          
BLAST of EWM28626.1 vs. NCBI_GenBank
Match: gi|923899349|ref|XP_013720169.1| (PREDICTED: pyruvate decarboxylase 4-like [Brassica napus] >gi|923899351|ref|XP_013720170.1| PREDICTED: pyruvate decarboxylase 4-like [Brassica napus])

HSP 1 Score: 531.561 bits (1368), Expect = 0.000e+0
Identity = 270/511 (52.84%), Postives = 354/511 (69.28%), Query Frame = 0
Query:   17 YAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEE----HVSLPIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGE-YGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEAR-VAARPAETLLTMRFVHEQVQNLLTPKTALLVETGDSWFQGQTMKLPRGCGYEFQMQYGSIGWSVGAVLGYSLAAQHEGRRVVAMIGDGSFQMSAQEVSTMIRYGANPIIVLINNGGYTIEVEIHDGIYNVIKNWDYKKLIDAFCHDDGKALTICCKTQGELLEAMEQAKTHP--NLVFLELILDKDDCSKHLLEWGSRVATANGRP 519
            YAADG AR  GV A VVT+TVGGLS +NAIAGAYS++LP+I I G PNSND+ ++RILHHTIG  D  Q++  F  V      + +   A  QID AI TA+ + KPVY+ ++CN++       +  P+PF + P + SN   L AAV+ TL     A KPV+V GVK+R+A+A DA + LADA+G A+A MP AKG+ PE HP +IGTYWG VS+    E VESAD YIF G  FNDY++ GY+ L+KK+  +  + DRV    G+ +GCV M++F   LAK + RN+ + + Y RIF PE + +  +P E  L +  + + +Q +++ +TA++ ETGDSWF  Q +KLP+GCGYEFQMQYGSIGWSVGA LGY+ A     +RV+A IGDGSFQ++AQ+VSTM+R G   II LINNGGYTIEVEIHDG YNVIKNW+Y  L+DA  + +GK  T   + + EL+EA++ A T    +L F+E+I+ KDD SK LLEWGSRVA ANGRP
Sbjct:   97 YAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDFGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVNNLEDAHEQIDKAISTALKESKPVYISISCNLAATPHPTFIRDPVPFSLTP-RLSNKMGLEAAVEATLEFLNKAVKPVMVGGVKLRVAKASDAFVDLADASGYAMAVMPSAKGLVPEHHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSSVGYSLLLKKEKAIVVHPDRVTIANGQTFGCVLMSDFFTELAKRVKRNETAYENYHRIFVPEGKPLTCKPKEP-LRVNAMFQHIQKMISSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQAVPE--KRVLAFIGDGSFQVTAQDVSTMLRNGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVRYEEELVEAIKTATTEKKDSLCFIEVIVHKDDTSKELLEWGSRVAAANGRP 603          
BLAST of EWM28626.1 vs. NCBI_GenBank
Match: gi|1072910245|ref|XP_018446471.1| (PREDICTED: pyruvate decarboxylase 4 [Raphanus sativus] >gi|1072910247|ref|XP_018446477.1| PREDICTED: pyruvate decarboxylase 4 [Raphanus sativus])

HSP 1 Score: 531.176 bits (1367), Expect = 0.000e+0
Identity = 272/511 (53.23%), Postives = 353/511 (69.08%), Query Frame = 0
Query:   17 YAADGCARKNGVAAMVVTYTVGGLSAINAIAGAYSDDLPIIFISGAPNSNDYASDRILHHTIGKIDRRQQIDMFSHVVAEAVEIRSPGQAARQIDHAIVTAMTQKKPVYLDVACNISEE----HVSLPIPFQIPPPKPSNAASLRAAVQTTLTQWTHAAKPVIVIGVKVRMAEAFDAVIQLADAAGCAVATMPDAKGMFPEDHPQYIGTYWGPVSSVGAGETVESADMYIFLGSRFNDYNTTGYTCLIKKKGLVTANVDRVETPGGE-YGCVNMAEFAVALAKVIPRNDASIKAYTRIFAPEAR-VAARPAETLLTMRFVHEQVQNLLTPKTALLVETGDSWFQGQTMKLPRGCGYEFQMQYGSIGWSVGAVLGYSLAAQHEGRRVVAMIGDGSFQMSAQEVSTMIRYGANPIIVLINNGGYTIEVEIHDGIYNVIKNWDYKKLIDAFCHDDGKALTICCKTQGELLEAMEQAKTHP--NLVFLELILDKDDCSKHLLEWGSRVATANGRP 519
            YAADG AR  GV A VVT+TVGGLS +NAIAGAYS++LP+I I G PNSND+ ++RILHHTIG  D  Q++  F  V      + +   A  QID AI TA+ + KPVY+ ++CN++       +  PIPF + P + SN   L AAV+ TL     A KPV+V GVK+R+A+A DA + LADA+G A+A MP AKG+ PE HP +IGTYWG VS+    E VESAD YIF G  FNDY++ GY+ L+KK+  +  + DRV    G+ +GCV M++F   LAK + RN+ + + Y RIF PE + +  +P E  L +  + + +Q +L+ +TA++ ETGDSWF  Q +KLP GCGYEFQMQYGSIGWSVGA LGY+ A     +RV+A IGDGSFQ++AQ+VSTM+R G   II LINNGGYTIEVEIHDG YNVIKNW+Y  L+DA  + +GK  T   + + EL+EA++ A T    +L F+E+I+ KDD SK LLEWGSRVA ANGRP
Sbjct:   93 YAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDFGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVNNLEDAHEQIDKAISTALKESKPVYISISCNLAATPHPTFIRDPIPFSLTP-RLSNKMGLEAAVEATLEFLNKAVKPVMVGGVKLRVAKASDAFVDLADASGYAMAVMPSAKGLVPEHHPHFIGTYWGAVSTPFCSEIVESADAYIFAGPIFNDYSSVGYSLLLKKEKAIIVHPDRVTIANGQTFGCVLMSDFFAELAKRVKRNETAYENYHRIFVPEGKPLTCKPKEP-LRVNAMFQHIQKMLSSETAVIAETGDSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGATLGYAQAVPE--KRVLAFIGDGSFQVTAQDVSTMLRNGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVRYEEELVEAIKTATTEKKDSLCFIEVIVHKDDTSKELLEWGSRVAAANGRP 599          
The following BLAST results are available for this feature:
BLAST of EWM28626.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111044|gb|EWM28626.1|0.000e+0100.00pyruvate decarboxylase [Nannochloropsis gaditana][more]
gi|553188824|ref|XP_005854872.1|0.000e+099.41pyruvate decarboxylase [Nannochloropsis gaditana C... [more]
gi|585111045|gb|EWM28627.1|0.000e+0100.00pyruvate decarboxylase [Nannochloropsis gaditana][more]
gi|1072983400|ref|XP_018442241.1|0.000e+053.14PREDICTED: pyruvate decarboxylase 4-like isoform X... [more]
gi|922557570|ref|XP_013606887.1|0.000e+053.53PREDICTED: pyruvate decarboxylase 1-like [Brassica... [more]
gi|923926618|ref|XP_013732259.1|0.000e+053.53PREDICTED: pyruvate decarboxylase 1-like [Brassica... [more]
gi|1121328277|ref|WP_073636499.1|0.000e+053.88pyruvate decarboxylase [Scytonema sp. HK-05] >gi|1... [more]
gi|922425084|ref|XP_013618619.1|0.000e+052.75PREDICTED: pyruvate decarboxylase 4 [Brassica oler... [more]
gi|923899349|ref|XP_013720169.1|0.000e+052.84PREDICTED: pyruvate decarboxylase 4-like [Brassica... [more]
gi|1072910245|ref|XP_018446471.1|0.000e+053.23PREDICTED: pyruvate decarboxylase 4 [Raphanus sati... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2115rna2115Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications