EWM28581.1, cds2101 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28581.1 vs. NCBI_GenBank
Match: gi|585110999|gb|EWM28581.1| (magnesium transporter [Nannochloropsis gaditana]) HSP 1 Score: 1503.42 bits (3891), Expect = 0.000e+0 Identity = 735/735 (100.00%), Postives = 735/735 (100.00%), Query Frame = 0 Query: 1 MRYYPPPYAFFFTAFIPEKEEVRNHSECSTSCAACQGPKRAAFMGSDNTRRAQISASSFPPLASIVDAHRSNAVLVISWAFFSLLVMSTSPSDGASVPRGKPASSNMLFLRHIPQASSEISEAGLSMSTSQHNQQSHYRSYTAAGSNRFNYHGGQGGYQQGQSHPTLNEDTEDISKSKPLNGRNGWINLARDYIRRTLEVVWTPGSQRSGVSGGSSSTNSASSSYLRWRRATQDLLGLGGNAGAANTMGGGTRHYKVHHSHNSFQPPPQPRHARHLLAPRGQGLHPGKVGSLLLAAHPTSGEAGSAGFDGGMLGGRDEEGGKPHHRIGSSALDRISINMTLEANLREGVGGQLRRDCPVELIAPCAVPSASLVEHNVLREEGLVVPASFLVGDVVDFITRMSKLERYNGGPGDGREAEGGGGGPCRSLERIFVTDCGRLVGYVTSMDLLVQDRAAPLLSIVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGSTESFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSSAMVIRGIATGEINRKNGWKAVVREVKAALLMSALLAVAAFLRVYITPGSTVMSTVAVTLALSVTVAGRGSRQLCLPGALHLSGRGGRAGLVCSVECHVGLSGFPVMRTSSRGGHEKGRRHVSQGSRKARSLDSFCMCTEGGN 735 MRYYPPPYAFFFTAFIPEKEEVRNHSECSTSCAACQGPKRAAFMGSDNTRRAQISASSFPPLASIVDAHRSNAVLVISWAFFSLLVMSTSPSDGASVPRGKPASSNMLFLRHIPQASSEISEAGLSMSTSQHNQQSHYRSYTAAGSNRFNYHGGQGGYQQGQSHPTLNEDTEDISKSKPLNGRNGWINLARDYIRRTLEVVWTPGSQRSGVSGGSSSTNSASSSYLRWRRATQDLLGLGGNAGAANTMGGGTRHYKVHHSHNSFQPPPQPRHARHLLAPRGQGLHPGKVGSLLLAAHPTSGEAGSAGFDGGMLGGRDEEGGKPHHRIGSSALDRISINMTLEANLREGVGGQLRRDCPVELIAPCAVPSASLVEHNVLREEGLVVPASFLVGDVVDFITRMSKLERYNGGPGDGREAEGGGGGPCRSLERIFVTDCGRLVGYVTSMDLLVQDRAAPLLSIVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGSTESFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSSAMVIRGIATGEINRKNGWKAVVREVKAALLMSALLAVAAFLRVYITPGSTVMSTVAVTLALSVTVAGRGSRQLCLPGALHLSGRGGRAGLVCSVECHVGLSGFPVMRTSSRGGHEKGRRHVSQGSRKARSLDSFCMCTEGGN Sbjct: 1 MRYYPPPYAFFFTAFIPEKEEVRNHSECSTSCAACQGPKRAAFMGSDNTRRAQISASSFPPLASIVDAHRSNAVLVISWAFFSLLVMSTSPSDGASVPRGKPASSNMLFLRHIPQASSEISEAGLSMSTSQHNQQSHYRSYTAAGSNRFNYHGGQGGYQQGQSHPTLNEDTEDISKSKPLNGRNGWINLARDYIRRTLEVVWTPGSQRSGVSGGSSSTNSASSSYLRWRRATQDLLGLGGNAGAANTMGGGTRHYKVHHSHNSFQPPPQPRHARHLLAPRGQGLHPGKVGSLLLAAHPTSGEAGSAGFDGGMLGGRDEEGGKPHHRIGSSALDRISINMTLEANLREGVGGQLRRDCPVELIAPCAVPSASLVEHNVLREEGLVVPASFLVGDVVDFITRMSKLERYNGGPGDGREAEGGGGGPCRSLERIFVTDCGRLVGYVTSMDLLVQDRAAPLLSIVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGSTESFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSSAMVIRGIATGEINRKNGWKAVVREVKAALLMSALLAVAAFLRVYITPGSTVMSTVAVTLALSVTVAGRGSRQLCLPGALHLSGRGGRAGLVCSVECHVGLSGFPVMRTSSRGGHEKGRRHVSQGSRKARSLDSFCMCTEGGN 735
BLAST of EWM28581.1 vs. NCBI_GenBank
Match: gi|298709220|emb|CBJ31161.1| (divalent cation transporter, carboxyterminus [Ectocarpus siliculosus]) HSP 1 Score: 234.572 bits (597), Expect = 2.897e-66 Identity = 136/299 (45.48%), Postives = 191/299 (63.88%), Query Frame = 0 Query: 385 VPASFLVGDVVDFITRMSKLER---------YNGGPGDGREAEGGGGGPCRSLE-RIFVTDCGRLVGYVTSMDLLVQDRAAPLLSIVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGSTESFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSSAMVIRGIATGEINRKNGWKAVVREVKAALLMSALLAVAAFLRVYITPGSTVMSTVAVTLALSVTVAGRGSRQLCLPGALH 673 +P F VG+ VDFI ++ ++R P G G SL RI+VT+ G L GY+T LL P+ ++R E ++ + D ++DA +R + APVV D V+V ++ PSD+L+EME+EATDD+ R SGSG ES+FGTP+ LV +R WLVSLL LQS SS+IL F +IE+++VIALFLTMLTGTAGNAGNQSSA+VIRG+AT EI++ N W+ + RE +A + + +L+VA+F+RV +TPG+T ++T+AV++A+ TV G P LH Sbjct: 77 IPLHFSVGETVDFIRTIATVDRDYRRELSSPLVHLPEGGGGEAAAADGMGSSLSSRIYVTENGTLKGYITMAVLLTHQSETPVAELLRELEEMLHEGDSWEDAAHRLRQANVLAAPVVDSDGVLVAVLNPSDLLQEMEIEATDDIMRQSGSGGGESYFGTPLPSLVASRVGWLVSLLCLQSFSSLILQSFQNVIEKNIVIALFLTMLTGTAGNAGNQSSAIVIRGLATEEIHQGNRWRVIWREARAGVASACVLSVASFVRVLLTPGATTVATLAVSVAMGTTVVGAVMFGTIAPIVLH 375
BLAST of EWM28581.1 vs. NCBI_GenBank
Match: gi|873240238|emb|CEL93578.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 211.846 bits (538), Expect = 1.960e-57 Identity = 133/274 (48.54%), Postives = 180/274 (65.69%), Query Frame = 0 Query: 391 VGDVVDFITRMSKLERYNGGPGDGREAEGGGGGPCRSLERIFVTDCGRLVGYVTSMDLLVQDRAAPLLSIVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGSTE-------SFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSSAMVIRGIATGEINRKNGWKAVVREVKAALLMSALLAVAAFLRVYITPGSTVMSTVAVTLALSVT 657 + D ++ + +S + GDG E E + I+VT G L GYVT DLL+ PL ++++ EVV R S+ ++A +R + +T AP+V E +VGI++P+D+L EME E T+D+ R+ G +E S+F TPV++ + +RA W+VSLL LQSLSSI+LT F +IER+LVIALFLTMLTGTAGNAGNQSSA VIRG+ATGEI N WK V+RE++ A +M+ LLA AAF+RV +TPGSTV S V V LA+ T Sbjct: 119 IEDCLNIVRSISVADLQMPPSGDGAE-EAPASLSDLLADSIYVTQEGELRGYVTMGDLLMASPHTPLKTVLKPTEVV-RISENLEEASKRLRQRFVTMAPLVDEKGQLVGILSPNDLLNEMEAELTEDLLRFEGIFPSETMEKVGDSYFATPVIEHIKSRAGWVVSLLFLQSLSSIVLTKFQGVIERNLVIALFLTMLTGTAGNAGNQSSATVIRGLATGEITHANAWKVVLRELRIASVMAVLLAGAAFMRVALTPGSTVASAVVVGLAMGAT 390
BLAST of EWM28581.1 vs. NCBI_GenBank
Match: gi|545702380|ref|XP_005703520.1| (magnesium transporter, MgtE family [Galdieria sulphuraria] >gi|452819950|gb|EME27000.1| magnesium transporter, MgtE family [Galdieria sulphuraria]) HSP 1 Score: 186.422 bits (472), Expect = 1.316e-49 Identity = 102/235 (43.40%), Postives = 151/235 (64.26%), Query Frame = 0 Query: 429 ERIFVTDC--GRLVGYVTSMDLLVQDRAAPLLSIVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGST---ESFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSSAMVIRGIATGEINRKNGWKAVVREVKAALLMSALLAVAAFLRVYITPGSTVMSTVAVTLALSVTV 658 +R+FV D G L GY+ +LL + + ++ C+VV RD + A +R+ + APVV + +GI+ D+++E+E EA +D R SG S +S+F T L+ R SWLV+LL+ QS+SSIIL F LIERH+VIALFLTML GT GNAGNQSSA+VIRG+ATGEI+R+N + V RE + A++M+++L++ F+RV T + + + + V++AL + V Sbjct: 34 DRLFVLDAENGELRGYILIEELLFVELEQNVTVFMKKCDVVFRDDTSLEIAARKVRSFGVFCAPVVDSEGNFLGIVNALDIIREVEFEAAEDFMRVSGLNSVDVFQSYFETSSFSLIRERLSWLVALLLFQSISSIILGFFQDLIERHVVIALFLTMLIGTGGNAGNQSSAIVIRGLATGEIDRRNAYLVVSREFRIAVIMASILSIVGFVRVLFTVPNNIKAALTVSIALFLIV 268
BLAST of EWM28581.1 vs. NCBI_GenBank
Match: gi|818238329|gb|KKP25550.1| (magnesium transporter [candidate division TM6 bacterium GW2011_GWE2_31_21] >gi|818266834|gb|KKP53078.1| magnesium transporter [candidate division TM6 bacterium GW2011_GWF2_33_332]) HSP 1 Score: 166.007 bits (419), Expect = 9.224e-42 Identity = 88/234 (37.61%), Postives = 147/234 (62.82%), Query Frame = 0 Query: 428 LERIFVTD-CGRLVGYVTSMDLLVQDRAAPLLSIVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGST-ESFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSSAMVIRGIATGEINRKNGWKAVVREVKAALLMSALLAVAAFLRVYITPGSTVMSTVAVTLALSVTVA 659 ++RI++TD +L GY+ DL++ + I E+++ ++ + M+ L PVV + +GIIT + + +E EA++DV + SG GS +++F TP +L+ R+ WL++LL+LQS SS +L+ + LI ++ ++ FL ML GT GNAGNQS A+VIRG++TGEI+RKNG K + RE + A++++ LAV F RVY+T + +++ V ++++LS V Sbjct: 78 VDRIYITDRNNKLTGYIKIEDLVLNKPQTLISDIFHQNELIINVHEDQEIVANQMKHYDLLSVPVVDNENNFLGIITADESMDVIEEEASEDVYKMSGLGSVDQTYFQTPFWRLIWQRSFWLITLLILQSASSFVLSSYEKLITQNAILFFFLNMLIGTGGNAGNQSGALVIRGLSTGEIHRKNGLKVLFREFRVAIIIALFLAVIGFERVYLTRHN-LIAAVVISISLSAIVV 310
BLAST of EWM28581.1 vs. NCBI_GenBank
Match: gi|818236930|gb|KKP24180.1| (Response regulator receiver protein [candidate division TM6 bacterium GW2011_GWF2_28_16]) HSP 1 Score: 161.77 bits (408), Expect = 2.312e-39 Identity = 90/241 (37.34%), Postives = 151/241 (62.66%), Query Frame = 0 Query: 422 GGPCRSLERIFVTDCG-RLVGYVTSMDLLVQDRAAPLLSIVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSG-SGSTESFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSSAMVIRGIATGEINRKNGWKAVVREVKAALLMSALLAVAAFLRVYITPGSTVMS-TVAVTLALSVTVA 659 G L+ I+V D +L+G++ DL+V L +I+R +V+ + + +DA + T APVV ++ +G++T D+ +E EA++DV + SG S + + +F TP+ + + R WLV LL+LQS+SS IL+ ++++ +I++FLTML GT GNAGNQSSA++IRG+ATG+I+RKNG++ ++RE+ + +S +L V AF RV+ + + TV+ L L +T++ Sbjct: 168 GEKQEVLQIIYVIDKDQKLLGHINLGDLVVNKPETILKNIIRKNTLVLNVNQDQEDAANQVSHYGFTAAPVVDDNNNFLGVLTAEDVFDVLEEEASEDVYKMSGLSPAQDEYFQTPIWKFIWQRTPWLVGLLLLQSVSSFILS-----VDKYFIISMFLTMLIGTGGNAGNQSSAVIIRGLATGQISRKNGFRVLMREMSVSFFISIILGVVAFTRVFFFRQDFLSAITVSTALVLIITMS 403
BLAST of EWM28581.1 vs. NCBI_GenBank
Match: gi|544215349|ref|XP_005537820.1| (probabale Mg2+ transporter MgtE [Cyanidioschyzon merolae strain 10D] >gi|449018382|dbj|BAM81784.1| probabale Mg2+ transporter MgtE [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 159.458 bits (402), Expect = 5.292e-38 Identity = 121/335 (36.12%), Postives = 185/335 (55.22%), Query Frame = 0 Query: 354 RRDCPVELIAPCAVPSASLVEHNVLREEGLVVPASFLVGDVVDFITRMSKLE---------RYNGGPGDGR-EAEGGGGGPCRS-----------LERIFVTD-CGR-LVGYVTSMDLLVQ-DRAAPLLSIVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGS------TESFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSSAMVIRGIATGEINRKNGWKAVVREVKAALLMSALLAVAAFLRVYITPGSTVMSTVAVTLALSVTV 658 R C ++ P VP+ + R E + VP + V + + ++ ++ NG D +A G P + L+ ++V D C LVG+++ DLL+ D + VR C VV+ +E++ A+ +R APVV + +VG++T +D+++EME+EATDD+ R+ G S ES+F T V R++WLV+LL+LQSLSSI+L +SALIERH+V+ALFLTM+ G GNAGNQSSA+VIRG+ATGEI+ N + + RE+ ++ +L+ F RVYI G ++ V V+ +L +TV Sbjct: 145 REACVATIMGPGCVPAGGVWTDTTSRREAVTVPLGYTVRECKGLLWQLHRVHDTAPVPDPATVNGTVRDSNSQAPGSLQLPITAAMQVRNQSAPVLDALYVLDPCTSGLVGFLSLEDLLLAADDEQKIDQFVRQCSVVLSVDEEFEAAVRRLRNVGALTAPVVDREMRLVGLVTAADIIREMELEATDDILRFGGVESPLQRDDIESYFQTSTRSFVIGRSAWLVALLLLQSLSSIVLGQYSALIERHVVLALFLTMMVGAGGNAGNQSSALVIRGLATGEISPANAGRVIRRELLVGCAIATILSAVGFTRVYIG-GGDFLACVTVSTSLWITV 478
BLAST of EWM28581.1 vs. NCBI_GenBank
Match: gi|818369580|gb|KKQ49822.1| (Response regulator receiver protein [candidate division TM6 bacterium GW2011_GWF2_38_10]) HSP 1 Score: 149.058 bits (375), Expect = 5.739e-35 Identity = 86/234 (36.75%), Postives = 139/234 (59.40%), Query Frame = 0 Query: 428 LERIFVTDCGRLV-GYVTSMDLLVQDRAAPLLSIVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGSTE-SFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSSAMVIRGIATGEINRKNGWKAVVREVKAALLMSALLAVAAFLRVYITPGSTVMSTVAVTLALSVTVA 659 + R++VT+ +V GYVT L++ + + I+ E++V ++ +D + M L APVV ++ +G+IT D+ ++ E ++DV + SG E S+F TP L+ R WLV LL+LQS SSII+ + + +++V+ FLTML GT GNAGNQS+ +VIRG+ T EI R+NG + ++RE +L M+ LLA+ FLRV+++ + + S + T + V Sbjct: 173 MHRVYVTNAENIVVGYVTLEQLVLNKPESVIARIMGKNELLVYVDEDQEDIVEQMEHYDLVCAPVVDKEHHFLGVITADDVYDIIKEEGSEDVYKMSGLSPMEHSYFATPWWVLIRQRLPWLVGLLILQSFSSIIMASYGTAMGQYVVLTFFLTMLVGTGGNAGNQSATLVIRGLTTKEITRQNGMRMLLREFGISLGMAFLLAIVGFLRVWMSAHNMLFSFIVGTSLFVIVVT 406
BLAST of EWM28581.1 vs. NCBI_GenBank
Match: gi|818328631|gb|KKQ11379.1| (Magnesium transporter, partial [candidate division TM6 bacterium GW2011_GWF2_36_6]) HSP 1 Score: 131.339 bits (329), Expect = 8.783e-30 Identity = 76/179 (42.46%), Postives = 113/179 (63.13%), Query Frame = 0 Query: 424 PCRSLERIF-VTDCGR-LVGYVTSMDLLVQDRAAPLLS-IVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGSTE-SFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSSAMVIR 598 P +S++ +F VTD +VGY+T +D LV ++ LLS I+ E +V ++ +D M+ L APV+ +++ +GIIT D+ + M E ++DV + SG E S+F TP QLV R WL+ LL+LQS SS+IL ++++I + +I LFLTML GT GNAGNQS+ +VIR Sbjct: 168 PKQSVDNVFYVTDKNNVIVGYLT-IDKLVLNKPETLLSQIMDEAEFLVYVDEDQEDVANQMKHYNLICAPVIDKEKHFLGIITAEDVFEIMTEEESEDVYKMSGQAPMEHSYFATPTWQLVRQRIPWLIGLLLLQSFSSMILLQYNSMISSYAIITLFLTMLIGTGGNAGNQSATLVIR 345
BLAST of EWM28581.1 vs. NCBI_GenBank
Match: gi|818545581|gb|KKR97341.1| (Response regulator receiver protein [candidate division TM6 bacterium GW2011_GWE2_41_16]) HSP 1 Score: 131.339 bits (329), Expect = 5.291e-29 Identity = 78/246 (31.71%), Postives = 140/246 (56.91%), Query Frame = 0 Query: 429 ERIFVTDC-GRLVGYVTSMDLLVQDRAAPLLSIVRSCEVVVRDSDEYDDAIGAMRAKRLTYAPVVTEDEVVVGIITPSDMLKEMEMEATDDVSRYSGSGSTE-SFFGTPVLQLVTARASWLVSLLMLQSLSSIILTHFSALIERHLVIALFLTMLTGTAGNAGNQSSAMVIRGIATGEINRKNGWKAVVREVKAALLMSALLAVAAFLRVYITPGSTVMSTVAVTLALSVTVAGRGSRQLCLPGAL 672 + IFVTD RL GY+ DL++++ L IV + V + ++ + + M ++ APV+ ++ +G+IT ++ +E EA++D+ R + E S+ TP ++++ R SWLV LL+ QS+S ++L ++ A + + F++MLT T GNA +Q+SA++I+G+ATG+I N K + RE+ A ++S +L V AF+R Y ++ +A++++L V C+P L Sbjct: 173 QTIFVTDQDNRLEGYIKLEDLVLKNPKFRLFDIVHTDNVTIPAQEDRQEVVNIMTHYDVSIAPVIDKEGFFLGVITSDTLVDVVEQEASEDIYRMATVSPMEGSYLETPFVKILIQRGSWLVFLLLAQSISGMVLAYYEATLAFFYL--RFISMLTSTGGNASSQTSAIIIQGLATGQITSANVKKFLWREISMAAILSFVLGVVAFMRAYTASSHNLLGCLAISISLCAIVMVSIVLGSCMPLIL 416 The following BLAST results are available for this feature:
BLAST of EWM28581.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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