EWM28614.1, cds2081 (CDS) Nannochloropsis gaditana

Overview
NameEWM28614.1
Unique Namecds2081
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:866665..866704 -
Alignment locationCM002458.1:865818..866476 -
Alignment locationCM002458.1:865280..865705 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28614.1
ProductPUB domain protein
Orig transcript idgnl|cribi|Naga_100009g71.657.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:866665..866704 -
CM002458.1supercontigCM002458.1:865818..866476 -
CM002458.1supercontigCM002458.1:865280..865705 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
Homology
BLAST of EWM28614.1 vs. NCBI_GenBank
Match: gi|585111032|gb|EWM28614.1| (PUB domain protein [Nannochloropsis gaditana])

HSP 1 Score: 749.584 bits (1934), Expect = 0.000e+0
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
Query:    1 MEFRNTLATLESIETRLTCIEATQDQPEVLASEAGALEELHSDLTTSLSRTFAKLQKRCQEVDPITQKTLYGDAMKARVAEAFSRYSSLLQRVVELKNGPMEKACHDAENVRLAAESQARLAREEAAAARERQQEEAARAQAAAKAAETRRLEMEANQRALLHREAALAREKKKKERDEREQAADHAWAEARAEDAALVDSILPGARGAEEALINLRHACGGEATKAYKEAVATLALYVGNIIAHPEEAAFKRISLEGAHFKSKLGPWGPGSLHCLVAAGFQVQREEEDEGGKGGQGEDSRTADGAGQEGSSLREDGGSGVEGKEGEIVLPGARVLLMIEPDMMRHQEEWTVWYETCKGVRDLLQQEEARVKRL 374
            MEFRNTLATLESIETRLTCIEATQDQPEVLASEAGALEELHSDLTTSLSRTFAKLQKRCQEVDPITQKTLYGDAMKARVAEAFSRYSSLLQRVVELKNGPMEKACHDAENVRLAAESQARLAREEAAAARERQQEEAARAQAAAKAAETRRLEMEANQRALLHREAALAREKKKKERDEREQAADHAWAEARAEDAALVDSILPGARGAEEALINLRHACGGEATKAYKEAVATLALYVGNIIAHPEEAAFKRISLEGAHFKSKLGPWGPGSLHCLVAAGFQVQREEEDEGGKGGQGEDSRTADGAGQEGSSLREDGGSGVEGKEGEIVLPGARVLLMIEPDMMRHQEEWTVWYETCKGVRDLLQQEEARVKRL
Sbjct:    1 MEFRNTLATLESIETRLTCIEATQDQPEVLASEAGALEELHSDLTTSLSRTFAKLQKRCQEVDPITQKTLYGDAMKARVAEAFSRYSSLLQRVVELKNGPMEKACHDAENVRLAAESQARLAREEAAAARERQQEEAARAQAAAKAAETRRLEMEANQRALLHREAALAREKKKKERDEREQAADHAWAEARAEDAALVDSILPGARGAEEALINLRHACGGEATKAYKEAVATLALYVGNIIAHPEEAAFKRISLEGAHFKSKLGPWGPGSLHCLVAAGFQVQREEEDEGGKGGQGEDSRTADGAGQEGSSLREDGGSGVEGKEGEIVLPGARVLLMIEPDMMRHQEEWTVWYETCKGVRDLLQQEEARVKRL 374          
BLAST of EWM28614.1 vs. NCBI_GenBank
Match: gi|298710109|emb|CBJ31822.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 95.9005 bits (237), Expect = 1.208e-18
Identity = 102/363 (28.10%), Postives = 166/363 (45.73%), Query Frame = 0
Query:    2 EFRNTLATLESIETRLTCI--EATQDQPEVLASEAGALEELHSDLTTSLSRTFAKLQKRCQEVDPITQKTLYGDAMKARVAEAFSRYSSLLQRVVELKNGPMEKACHDAENVRLAAESQARLAREEAAAARERQQEEAARAQAAAKAAETRRLEMEANQRAL------LHREAALAREKKKK--ERDEREQAADHAWAEARAEDAALVDSILPGARGAEEALINLRHACGGEATKAYKEAVATLALYVGNIIAHPEEAAFKRISLEGAHFKSKLGPWGPGSLHCLVAAGFQVQREEEDEGGKGGQGEDSRTADGAGQEGSSLREDGGSGVEGKEGEIVLPGARVLLMIEPDMMRHQEEWTVWY 354
            EF+ T   L S+E  L  +  +++   PE LA+ + A       L   LS+  +K ++R  E DP++    YG++M A+V    +++ +LL+R+ +L+   +  A    E+    +  +AR  RE      ERQQ+E AR +     AE  R    A Q  L      L  EAA +RE++++  E++E   A D    E  A++  L  S+  GA G E+ L  +  ACGG+  +  K AV  L   + N+ ++PE+  F+RI  +  +F+  LG +  G +  L+++GF++Q EE                                            G  VL+M EPD+    + WT WY
Sbjct:    3 EFKRTAEDLASLEELLGSLGSDSSTPAPEKLATFSTA----KGRLEDELSKKVSKFERRLNETDPVSGAPRYGESMTAKVVALGAKHQALLERLPQLE-AEITAAVSQHESREAVSAEEAR-KRE-----VERQQQEDARERVRLAEAEEERRRAVATQSILDRERERLATEAAQSREERQRAAEQEEARLAEDKQTREREAQE--LASSVAVGAAGVEDGLRRIDDACGGKPAEK-KAAVQALQQILRNVASNPEDPRFRRIKRDNENFQRALGRF-EGGIQILLSSGFRMQVEE--------------------------------------------GQTVLVMNEPDLSEDMDGWTEWY 306          
BLAST of EWM28614.1 vs. NCBI_GenBank
Match: gi|953502464|emb|CEG36395.1| (Dynein light chain [Plasmopara halstedii])

HSP 1 Score: 86.2705 bits (212), Expect = 5.293e-15
Identity = 89/370 (24.05%), Postives = 159/370 (42.97%), Query Frame = 0
Query:    4 RNTLATLESIETRLTCIEATQDQPEVLASEAGALEELHSDLTTSLSRTFAKLQKRCQEVDPITQKTLYGDAMKARVAEAFSRYSSLLQRVVELKNGPMEKACHDAENVRLAAESQARLAREEAAAARERQQEEAARAQAAAKAAETRRLEMEANQRALLHRE--------AALAREKKKKERDEREQAADHAWAEARAEDAALVDSILPGARGAEEALINLRHACGGEATKAYKEAVATLALYVGNIIAHPEEAAFKRISLEGAHFKSKLGPWGPGSLHCLVAAGFQVQREEEDEGGKGGQGEDSRTADGAGQEGSSLREDGGSGVEGKEGEIVLPGARVLLMIEPDMMRHQEEWTVWYETCKGVRDLLQ 365
            R  +A +E++E+RL  ++       +          +   +   ++ T  K + RC  +DP+T+   +G  M A+V +   RY ++   + E  + P+          +L    Q     +EA A R+++ EE  RA   A   + +RLE EA +R +L R          A+A +KK+++R+      +    E + +   L  SI PG +G E A+  LR + G EA   ++++V  L   V NI   P+  AF++I  +  HF + LG +  G   CL+A GF+       E  +G + E                                    V +M EPD+    + W+ W++  K +++ ++
Sbjct:   86 RRAIANVETLESRLLELQNALAADNINRVFQDTFSFVLLAINGEMNATMDKFRARCSMIDPVTKNPRFGPKMMAKVKDMLRRYDNVKLAIQE--DTPLRLQIE----TKLNDLKQHEEEAKEAEAIRKKEAEEDQRAAERAAEQDGKRLEEEAQEREILRRRQEELRIQRLAVAAQKKREQRERERLEEEQQRQEEQKKRELLNASISPGKKGLELAIDLLRESTGSEAL--FRQSVEKLLAVVNNICKSPDNTAFRQIPKDNMHFHADLGQFT-GGYQCLLALGFK-------EMQQGDENEPR---------------------------------FVFVMEEPDLSEDLDAWSTWFDGLKEMQNFVE 406          
BLAST of EWM28614.1 vs. NCBI_GenBank
Match: gi|568023993|gb|ETL98037.1| (hypothetical protein L917_04811 [Phytophthora parasitica])

HSP 1 Score: 85.5001 bits (210), Expect = 5.496e-15
Identity = 95/388 (24.48%), Postives = 163/388 (42.01%), Query Frame = 0
Query:    2 EFRNTLATLESIETRLTCIEATQDQPEVLASEAG--ALEELHSDLTTSLS----RTFAKLQKRCQEVDPITQKTLYGDAMKARVAEAFSRYSSLLQRVVELKNGPMEKACHDAENVRLAAESQAR-LAREEAAAARERQQEEAARAQAAAKAAETRRLEMEANQRALLHREA-----------------ALAREKKKKERDEREQAADHAWAEARAEDAALVDSILPGARGAEEALINLRHACGGEATKAYKEAVATLALYVGNIIAHPEEAAFKRISLEGAHFKSKLGPWGPGSLHCLVAAGFQVQREEEDEGGKGGQGEDSRTADGAGQEGSSLREDGGSGVEGKEGEIVLPGARVLLMIEPDMMRHQEEWTVWYETCKGVRDLLQ 365
            EFR   A ++++E RL  ++      + +A +     LEE  S + T++         K + RC  VDP+T +  +G  M A+V +   RY ++  ++   ++ P+          RL  ES+ + LA+++      RQQEE AR + A  A    +L  E  +  LLH                    A+A +KK+++R++     +        E   L  SI  G  G E+A+  LR     E    +++++  L   V NI   PE AAF+ I  +  HF + LG + PG   CL+A GF+                                       E ++G+   P   V ++ EPD+    + W+ W++  K ++ L++
Sbjct:    3 EFRQATAHVDALEARLAQLQ------QCIADDNANDYLEENFSFILTAIDGDVDVLMEKFRARCSMVDPVTNQLRFGPKMLAKVQDLLHRYDNI--KLAMEEDAPL----------RLQVESKLKQLAQQQVI----RQQEEIAREKEARDAQRAAKLANEQEKERLLHEAREREAEREREEQERIQALAIAAQKKREQREKERAEEERQRQLEEQERERLNASIPHGKEGLEKAIAMLREGTSNETL--FRQSLQKLLAVVSNICKSPENAAFRHIPKDNVHFHADLGQY-PGGHQCLLAMGFK---------------------------------------ELQQGDETQPRT-VFVLEEPDLSEDLDAWSTWFDELKELQSLVE 325          
BLAST of EWM28614.1 vs. NCBI_GenBank
Match: gi|570332394|gb|ETO80342.1| (hypothetical protein F444_05137 [Phytophthora parasitica P1976])

HSP 1 Score: 83.9593 bits (206), Expect = 1.502e-14
Identity = 95/388 (24.48%), Postives = 162/388 (41.75%), Query Frame = 0
Query:    2 EFRNTLATLESIETRLTCIEATQDQPEVLASEAG--ALEELHSDLTTSLS----RTFAKLQKRCQEVDPITQKTLYGDAMKARVAEAFSRYSSLLQRVVELKNGPMEKACHDAENVRLAAESQAR-LAREEAAAARERQQEEAARAQAAAKAAETRRLEMEANQRALLHREA-----------------ALAREKKKKERDEREQAADHAWAEARAEDAALVDSILPGARGAEEALINLRHACGGEATKAYKEAVATLALYVGNIIAHPEEAAFKRISLEGAHFKSKLGPWGPGSLHCLVAAGFQVQREEEDEGGKGGQGEDSRTADGAGQEGSSLREDGGSGVEGKEGEIVLPGARVLLMIEPDMMRHQEEWTVWYETCKGVRDLLQ 365
            EFR   A ++++E RL  ++      + +A +     LEE  S + T++         K + RC  VDP+T +  +G  M A+V +   RY ++  ++   ++ P+          RL  ES+ + LA+++      RQQEE AR + A  A     L  E  +  LLH                    A+A +KK+++R++     +        E   L  SI  G  G E+A+  LR     E    +++++  L   V NI   PE AAF+ I  +  HF + LG + PG   CL+A GF+                                       E ++G+   P   V ++ EPD+    + W+ W++  K ++ L++
Sbjct:    3 EFRQATAHVDALEARLAQLQ------QCIADDNANDYLEENFSFILTAIDGDVDVLMEKFRARCSMVDPVTNQLRFGPKMLAKVQDLLHRYDNI--KLAMEEDAPL----------RLQVESKLKQLAQQQVI----RQQEEIAREKEARDAQRAAELANEQEKERLLHEAREREAEREREEQERIQALAIAAQKKREQREKERAEEERQRQLEEQERERLNASIPHGKEGLEKAIAMLREGTSNETL--FRQSLQKLLAVVSNICKSPENAAFRHIPKDNVHFHADLGQY-PGGHQCLLAMGFK---------------------------------------ELQQGDETQPRT-VFVLEEPDLSEDLDAWSTWFDELKELQSLVE 325          
BLAST of EWM28614.1 vs. NCBI_GenBank
Match: gi|675187149|ref|XP_008902459.1| (hypothetical protein PPTG_09307 [Phytophthora parasitica INRA-310] >gi|566028674|gb|ETI51585.1| hypothetical protein F443_05100 [Phytophthora parasitica P1569] >gi|567966014|gb|ETK91473.1| hypothetical protein L915_04964 [Phytophthora parasitica] >gi|567994726|gb|ETL44878.1| hypothetical protein L916_04912 [Phytophthora parasitica] >gi|568054430|gb|ETM51211.1| hypothetical protein L914_04916 [Phytophthora parasitica] >gi|568097754|gb|ETN12496.1| hypothetical protein PPTG_09307 [Phytophthora parasitica INRA-310] >gi|570956359|gb|ETP21360.1| hypothetical protein F441_05102 [Phytophthora parasitica CJ01A1] >gi|570991574|gb|ETP49283.1| hypothetical protein F442_05159 [Phytophthora parasitica P10297])

HSP 1 Score: 83.1889 bits (204), Expect = 2.988e-14
Identity = 95/388 (24.48%), Postives = 162/388 (41.75%), Query Frame = 0
Query:    2 EFRNTLATLESIETRLTCIEATQDQPEVLASEAG--ALEELHSDLTTSLS----RTFAKLQKRCQEVDPITQKTLYGDAMKARVAEAFSRYSSLLQRVVELKNGPMEKACHDAENVRLAAESQAR-LAREEAAAARERQQEEAARAQAAAKAAETRRLEMEANQRALLHREA-----------------ALAREKKKKERDEREQAADHAWAEARAEDAALVDSILPGARGAEEALINLRHACGGEATKAYKEAVATLALYVGNIIAHPEEAAFKRISLEGAHFKSKLGPWGPGSLHCLVAAGFQVQREEEDEGGKGGQGEDSRTADGAGQEGSSLREDGGSGVEGKEGEIVLPGARVLLMIEPDMMRHQEEWTVWYETCKGVRDLLQ 365
            EFR   A ++++E RL  ++      + +A +     LEE  S + T++         K + RC  VDP+T +  +G  M A+V +   RY ++  ++   ++ P+          RL  ES+ + LA+++      RQQEE AR + A  A     L  E  +  LLH                    A+A +KK+++R++     +        E   L  SI  G  G E+A+  LR     E    +++++  L   V NI   PE AAF+ I  +  HF + LG + PG   CL+A GF+                                       E ++G+   P   V ++ EPD+    + W+ W++  K ++ L++
Sbjct:    3 EFRQATAHVDALEARLAQLQ------QCIADDNANDYLEENFSFILTAIDGDVDVLMEKFRARCSMVDPVTNQLRFGPKMLAKVQDLLHRYDNI--KLAMEEDAPL----------RLQVESKLKQLAQQQVI----RQQEEIAREKEARDAQRAAELANEQEKERLLHEAREREAEREREEQERIQALAIAAQKKREQREKERAEEERQRQLEEQERERLNASIPHGKEGLEKAIAMLREGTSNETL--FRQSLQKLLAVVSNICKSPENAAFRHILKDNVHFHADLGQY-PGGHQCLLAMGFK---------------------------------------ELQQGDETQPRT-VFVLEEPDLSEDLDAWSTWFDELKELQSLVE 325          
BLAST of EWM28614.1 vs. NCBI_GenBank
Match: gi|568023994|gb|ETL98038.1| (hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 82.4185 bits (202), Expect = 5.076e-14
Identity = 84/305 (27.54%), Postives = 138/305 (45.25%), Query Frame = 0
Query:    2 EFRNTLATLESIETRLTCIEATQDQPEVLASEAG--ALEELHSDLTTSLS----RTFAKLQKRCQEVDPITQKTLYGDAMKARVAEAFSRYSSLLQRVVELKNGPMEKACHDAENVRLAAESQAR-LAREEAAAARERQQEEAARAQAAAKAAETRRLEMEANQRALLHREA-----------------ALAREKKKKERDEREQAADHAWAEARAEDAALVDSILPGARGAEEALINLRHACGGEATKAYKEAVATLALYVGNIIAHPEEAAFKRISLEGAHFKSKLGPWGPGSLHCLVAAGFQ 282
            EFR   A ++++E RL  ++      + +A +     LEE  S + T++         K + RC  VDP+T +  +G  M A+V +   RY ++  ++   ++ P+          RL  ES+ + LA+++      RQQEE AR + A  A    +L  E  +  LLH                    A+A +KK+++R++     +        E   L  SI  G  G E+A+  LR     E    +++++  L   V NI   PE AAF+ I  +  HF + LG + PG   CL+A GF+
Sbjct:    3 EFRQATAHVDALEARLAQLQ------QCIADDNANDYLEENFSFILTAIDGDVDVLMEKFRARCSMVDPVTNQLRFGPKMLAKVQDLLHRYDNI--KLAMEEDAPL----------RLQVESKLKQLAQQQVI----RQQEEIAREKEARDAQRAAKLANEQEKERLLHEAREREAEREREEQERIQALAIAAQKKREQREKERAEEERQRQLEEQERERLNASIPHGKEGLEKAIAMLREGTSNETL--FRQSLQKLLAVVSNICKSPENAAFRHIPKDNVHFHADLGQY-PGGHQCLLAMGFK 282          
BLAST of EWM28614.1 vs. NCBI_GenBank
Match: gi|698788930|ref|XP_009827497.1| (hypothetical protein H257_04606 [Aphanomyces astaci] >gi|574117344|gb|ETV82826.1| hypothetical protein H257_04606 [Aphanomyces astaci])

HSP 1 Score: 82.0333 bits (201), Expect = 8.716e-14
Identity = 94/332 (28.31%), Postives = 146/332 (43.98%), Query Frame = 0
Query:   40 LHSDLTTSLSRTFAKLQKRCQEV---DPITQKTLYGDAMKARVAEAFSRYSSLLQRVVELKNGPMEKACHDAENVRLAAESQARLAREEAAAARERQQEEAARAQAAAKAAETRRLEM-EANQRALLHREA-ALAREKKKKERDEREQAADHAWAEARAEDAALVDSILPGARGAEEALINL-RHACGGEATKAYKEAVATLALYVGNIIAHPEEAAFKRISLEGAHFKSKLGPWGPGSLHCLVAAGFQVQREEEDEGGKGGQGEDSRTADGAGQEGSSLREDGGSGVEGKEGEIVLPGARVLLMIEPDMMRHQEEWTVWYETCKGVRDLLQ 365
            L   LT S      K+QK   ++   DPIT    YG AM+ ++     R S++ +      +    KA    +N +L  ++Q  L   +A   ++ Q+     AQ    A E  + ++ EA   A + REA A A +  + ER   +   +   AEA+ +   L  SI  G  G E AL  L RH     AT  ++ A  TL + + NI A P+ A F+ I+    HF  +LG + PG L CL+A GF+  R          QG  S + DGA                        P   + ++ EPD+ +  + W+ W++T K +RD ++
Sbjct:   47 LLQQLTASQPDLDEKIQKFVDKLAWRDPITNDPRYGPAMQEKILAVAGRISAVKEAAAAATDIIEPKASVALQNQQLRKQAQDDL---DAECLKKEQERACIEAQQVIAAQELLQKQLKEAEIAAQIEREALAKAAQAVRDERARVQAEKERQDAEAQRQQDELNQSIPVGLAGLEVALGLLGRHFQSDAAT--FRAAKRTLLVLLKNICAAPDNATFRHINAANEHFHRELGQF-PGGLQCLLALGFRPLR----------QG--STSDDGA------------------------PAPVIYVLEEPDLAQDLDAWSCWFDTLKLMRDYVE 336          
BLAST of EWM28614.1 vs. NCBI_GenBank
Match: gi|301100794|ref|XP_002899486.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103794|gb|EEY61846.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 80.4925 bits (197), Expect = 8.723e-14
Identity = 80/314 (25.48%), Postives = 131/314 (41.72%), Query Frame = 0
Query:   54 KLQKRCQEVDPITQKTLYGDAMKARVAEAFSRYSSLLQRVVELKNGPMEKACHDAENVRLAAESQARLAREEAAAARE--RQQEEAARAQAAAKAAETRRLEMEANQRALLHREAALAREKKKKERDEREQAADHAWAEARAEDAALVDSILPGARGAEEALINLRHACGGEATKAYKEAVATLALYVGNIIAHPEEAAFKRISLEGAHFKSKLGPWGPGSLHCLVAAGFQVQREEEDEGGKGGQGEDSRTADGAGQEGSSLREDGGSGVEGKEGEIVLPGARVLLMIEPDMMRHQEEWTVWYETCKGVRDLLQ 365
            K + RC  VDPIT +  +G  M A+V +   RY                      +NVRL  E  A L   EA    E  ++QE+    Q A +    ++ E +   +AL     A+A +KK+++R +     DH       E   L  SI  G    E A+  LR   G ++   +++++  L   V NI   PE AAF+ I  + AHF + LG + PG   CL+A GF+          +  QG++++  +                              V ++ EPD+    + W+ W++  K ++ L++
Sbjct:    4 KFRARCSMVDPITNQPRFGPKMLAKVQDLLHRY----------------------DNVRLTLEEDAPLPVNEAQRVAELAKEQEKQRLVQEAEEREVEQQREEQERIQAL-----AVAAQKKREQRVQERAEQDHQRQLEEQERERLNASIPHGKEELEMAIAMLRE--GTDSETLFRQSLQKLLAVVRNICQSPENAAFRHIPRDNAHFHADLGQY-PGGHQCLLAMGFK----------ELQQGDETQPRN------------------------------VFVLEEPDLSEDLDAWSSWFDELKELQSLVE 247          
BLAST of EWM28614.1 vs. NCBI_GenBank
Match: gi|568023995|gb|ETL98039.1| (hypothetical protein, variant 2 [Phytophthora parasitica])

HSP 1 Score: 80.8777 bits (198), Expect = 9.799e-14
Identity = 82/330 (24.85%), Postives = 138/330 (41.82%), Query Frame = 0
Query:   54 KLQKRCQEVDPITQKTLYGDAMKARVAEAFSRYSSLLQRVVELKNGPMEKACHDAENVRLAAESQAR-LAREEAAAARERQQEEAARAQAAAKAAETRRLEMEANQRALLHREA-----------------ALAREKKKKERDEREQAADHAWAEARAEDAALVDSILPGARGAEEALINLRHACGGEATKAYKEAVATLALYVGNIIAHPEEAAFKRISLEGAHFKSKLGPWGPGSLHCLVAAGFQVQREEEDEGGKGGQGEDSRTADGAGQEGSSLREDGGSGVEGKEGEIVLPGARVLLMIEPDMMRHQEEWTVWYETCKGVRDLLQ 365
            K + RC  VDP+T +  +G  M A+V +   RY ++  ++   ++ P+          RL  ES+ + LA+++      RQQEE AR + A  A    +L  E  +  LLH                    A+A +KK+++R++     +        E   L  SI  G  G E+A+  LR     E    +++++  L   V NI   PE AAF+ I  +  HF + LG + PG   CL+A GF+                                       E ++G+   P   V ++ EPD+    + W+ W++  K ++ L++
Sbjct:    3 KFRARCSMVDPVTNQLRFGPKMLAKVQDLLHRYDNI--KLAMEEDAPL----------RLQVESKLKQLAQQQVI----RQQEEIAREKEARDAQRAAKLANEQEKERLLHEAREREAEREREEQERIQALAIAAQKKREQREKERAEEERQRQLEEQERERLNASIPHGKEGLEKAIAMLREGTSNETL--FRQSLQKLLAVVSNICKSPENAAFRHIPKDNVHFHADLGQY-PGGHQCLLAMGFK---------------------------------------ELQQGDETQPRT-VFVLEEPDLSEDLDAWSTWFDELKELQSLVE 273          
The following BLAST results are available for this feature:
BLAST of EWM28614.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111032|gb|EWM28614.1|0.000e+0100.00PUB domain protein [Nannochloropsis gaditana][more]
gi|298710109|emb|CBJ31822.1|1.208e-1828.10conserved unknown protein [Ectocarpus siliculosus][more]
gi|953502464|emb|CEG36395.1|5.293e-1524.05Dynein light chain [Plasmopara halstedii][more]
gi|568023993|gb|ETL98037.1|5.496e-1524.48hypothetical protein L917_04811 [Phytophthora para... [more]
gi|570332394|gb|ETO80342.1|1.502e-1424.48hypothetical protein F444_05137 [Phytophthora para... [more]
gi|675187149|ref|XP_008902459.1|2.988e-1424.48hypothetical protein PPTG_09307 [Phytophthora para... [more]
gi|568023994|gb|ETL98038.1|5.076e-1427.54hypothetical protein, variant 1 [Phytophthora para... [more]
gi|698788930|ref|XP_009827497.1|8.716e-1428.31hypothetical protein H257_04606 [Aphanomyces astac... [more]
gi|301100794|ref|XP_002899486.1|8.723e-1425.48conserved hypothetical protein [Phytophthora infes... [more]
gi|568023995|gb|ETL98039.1|9.799e-1424.85hypothetical protein, variant 2 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2089rna2089Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications