EWM28577.1, cds2073 (CDS) Nannochloropsis gaditana

Overview
NameEWM28577.1
Unique Namecds2073
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:844687..844720 +
Alignment locationCM002458.1:844796..844902 +
Alignment locationCM002458.1:844953..845067 +
Alignment locationCM002458.1:845205..845290 +
Alignment locationCM002458.1:845551..845604 +
Alignment locationCM002458.1:845882..845893 +
Alignment locationCM002458.1:845988..846147 +
Alignment locationCM002458.1:846326..846444 +

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Properties
Property NameValue
Protein idEWM28577.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100009g79.620.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:844687..844720 +
CM002458.1supercontigCM002458.1:844796..844902 +
CM002458.1supercontigCM002458.1:844953..845067 +
CM002458.1supercontigCM002458.1:845205..845290 +
CM002458.1supercontigCM002458.1:845551..845604 +
CM002458.1supercontigCM002458.1:845882..845893 +
CM002458.1supercontigCM002458.1:845988..846147 +
CM002458.1supercontigCM002458.1:846326..846444 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28577.1 vs. NCBI_GenBank
Match: gi|585110995|gb|EWM28577.1| (hypothetical protein Naga_100009g79 [Nannochloropsis gaditana])

HSP 1 Score: 466.077 bits (1198), Expect = 3.588e-166
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0 
Query:    1 MMMMMMILKIEVTFSAGTERSHTGNGLDTSRQPVATRICAENSGNTNDDKHTLSTFSDASFLRGKADGEEKSQHYDARCCYALFYLLFSCVQNIPHFNIGGGTGFCKTDTRLSQIGTFLVSTTGLRSKKHEKITDSEREELIDDGLRRLGRHTRFAARVTRVVVDCEGFILVIVTLTILSLSICLGSIERCGDTESIQRKDSELLKQYVIHCTCQGCLRDSRVVREET 228
            MMMMMMILKIEVTFSAGTERSHTGNGLDTSRQPVATRICAENSGNTNDDKHTLSTFSDASFLRGKADGEEKSQHYDARCCYALFYLLFSCVQNIPHFNIGGGTGFCKTDTRLSQIGTFLVSTTGLRSKKHEKITDSEREELIDDGLRRLGRHTRFAARVTRVVVDCEGFILVIVTLTILSLSICLGSIERCGDTESIQRKDSELLKQYVIHCTCQGCLRDSRVVREET
Sbjct:    1 MMMMMMILKIEVTFSAGTERSHTGNGLDTSRQPVATRICAENSGNTNDDKHTLSTFSDASFLRGKADGEEKSQHYDARCCYALFYLLFSCVQNIPHFNIGGGTGFCKTDTRLSQIGTFLVSTTGLRSKKHEKITDSEREELIDDGLRRLGRHTRFAARVTRVVVDCEGFILVIVTLTILSLSICLGSIERCGDTESIQRKDSELLKQYVIHCTCQGCLRDSRVVREET 228
The following BLAST results are available for this feature:
BLAST of EWM28577.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110995|gb|EWM28577.1|3.588e-166100.00hypothetical protein Naga_100009g79 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2081rna2081Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications