EWM28593.1, cds2046 (CDS) Nannochloropsis gaditana

Overview
NameEWM28593.1
Unique Namecds2046
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:785020..785493 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28593.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100009g110.636.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:785020..785493 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28593.1 vs. NCBI_GenBank
Match: gi|585111011|gb|EWM28593.1| (hypothetical protein Naga_100009g110 [Nannochloropsis gaditana])

HSP 1 Score: 302.368 bits (773), Expect = 1.257e-103
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 
Query:    1 MFAACRDGKPRESETMKSIRRHLVPFSFTGRGRRGRGVLRRQRGSSPAGSLRPAARTPTAVRCPRAGRPGSLRPRRTELSGLPAGEPRQRGRLHFLVREPPAVPAPGSVSVTLGGGRCPRVVDRSVMGVKKVAALSPSGTRWERLDGGMGSDHLEEF 157
            MFAACRDGKPRESETMKSIRRHLVPFSFTGRGRRGRGVLRRQRGSSPAGSLRPAARTPTAVRCPRAGRPGSLRPRRTELSGLPAGEPRQRGRLHFLVREPPAVPAPGSVSVTLGGGRCPRVVDRSVMGVKKVAALSPSGTRWERLDGGMGSDHLEEF
Sbjct:    1 MFAACRDGKPRESETMKSIRRHLVPFSFTGRGRRGRGVLRRQRGSSPAGSLRPAARTPTAVRCPRAGRPGSLRPRRTELSGLPAGEPRQRGRLHFLVREPPAVPAPGSVSVTLGGGRCPRVVDRSVMGVKKVAALSPSGTRWERLDGGMGSDHLEEF 157
The following BLAST results are available for this feature:
BLAST of EWM28593.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111011|gb|EWM28593.1|1.257e-103100.00hypothetical protein Naga_100009g110 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2054rna2054Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications