EWM28665.1, cds1995 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28665.1 vs. NCBI_GenBank
Match: gi|585111088|gb|EWM28665.1| (dna-directed rna polymerase i subunit [Nannochloropsis gaditana]) HSP 1 Score: 1275.77 bits (3300), Expect = 0.000e+0 Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0 Query: 1 MKFLALATIVSTASAFLAPVPMHTRTQGRMYMADQAPVDEEVRSIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKHGRVAMLAVVGVLVQELYQWNENFPSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKFEGRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQASISDKPILEQTFDNRATTPPLARGGGDPLPHPLTAVFSPGPLFFYNRYRPCVSVIKTEIKAPSGLALFGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDARSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLAHEADSLDQALFRADLHRSTILRDTEMRLRRHLQTAGQVPKSWIPGETKIKRRALIKDFLQEVLSCKTCDRCSAPKTTNAVNGYIDSSKDANARLGGGNLTPGIRQGLEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLTPPGQRVRHESVPVIKASITITPVLPINHGESNQHQIPQ 621 MKFLALATIVSTASAFLAPVPMHTRTQGRMYMADQAPVDEEVRSIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKHGRVAMLAVVGVLVQELYQWNENFPSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKFEGRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQASISDKPILEQTFDNRATTPPLARGGGDPLPHPLTAVFSPGPLFFYNRYRPCVSVIKTEIKAPSGLALFGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDARSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLAHEADSLDQALFRADLHRSTILRDTEMRLRRHLQTAGQVPKSWIPGETKIKRRALIKDFLQEVLSCKTCDRCSAPKTTNAVNGYIDSSKDANARLGGGNLTPGIRQGLEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLTPPGQRVRHESVPVIKASITITPVLPINHGESNQHQIPQ Sbjct: 1 MKFLALATIVSTASAFLAPVPMHTRTQGRMYMADQAPVDEEVRSIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKHGRVAMLAVVGVLVQELYQWNENFPSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKFEGRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQASISDKPILEQTFDNRATTPPLARGGGDPLPHPLTAVFSPGPLFFYNRYRPCVSVIKTEIKAPSGLALFGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDARSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLAHEADSLDQALFRADLHRSTILRDTEMRLRRHLQTAGQVPKSWIPGETKIKRRALIKDFLQEVLSCKTCDRCSAPKTTNAVNGYIDSSKDANARLGGGNLTPGIRQGLEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLTPPGQRVRHESVPVIKASITITPVLPINHGESNQHQIPQ 621
BLAST of EWM28665.1 vs. NCBI_GenBank
Match: gi|553189308|ref|XP_005854974.1| (light-harvesting protein [Nannochloropsis gaditana CCMP526] >gi|422294085|gb|EKU21385.1| light-harvesting protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 390.963 bits (1003), Expect = 8.644e-131 Identity = 194/203 (95.57%), Postives = 195/203 (96.06%), Query Frame = 0 Query: 1 MKFLALATIVSTASAFLAPVPMHTRTQGRMYMADQAPVDEEVRSIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKHGRVAMLAVVGVLVQELYQWNENFPSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKFEGRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQASISDKPILEQTFD 203 MKFLALATIVSTASAFLAPVPMHTRTQGRMYMADQAPVDEEVRSIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKH VGVLVQELYQWNENFPSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKFEGRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQASISDKPILEQTF+ Sbjct: 1 MKFLALATIVSTASAFLAPVPMHTRTQGRMYMADQAPVDEEVRSIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKH--------VGVLVQELYQWNENFPSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKFEGRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQASISDKPILEQTFE 195
BLAST of EWM28665.1 vs. NCBI_GenBank
Match: gi|553189301|ref|XP_005854973.1| (DNA-directed RNA polymerase I subunit RPA1 [Nannochloropsis gaditana CCMP526] >gi|422294084|gb|EKU21384.1| DNA-directed RNA polymerase I subunit RPA1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 417.157 bits (1071), Expect = 2.433e-125 Identity = 195/199 (97.99%), Postives = 196/199 (98.49%), Query Frame = 0 Query: 258 FGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDARSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLAHEADSLDQALFRADLHRSTILRDTEMRLRRHLQTAGQVPKSWIPGETKIKRRALIKDFLQEVLSCKTCDRCSAPKTTNAVNGY 456 FGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDARSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLAHEADSLDQALFRADLHRSTILRDTEMRLRRHLQTAGQVPKSWIPGETKIKRRALIKDFLQEVLSCKTCDRCSAPKTT +GY Sbjct: 24 FGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDARSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLAHEADSLDQALFRADLHRSTILRDTEMRLRRHLQTAGQVPKSWIPGETKIKRRALIKDFLQEVLSCKTCDRCSAPKTTVRKDGY 222 HSP 2 Score: 285.804 bits (730), Expect = 1.168e-79 Identity = 140/142 (98.59%), Postives = 140/142 (98.59%), Query Frame = 0 Query: 451 NAVNGYIDSSKDANARLGGGNLTPGIRQGLEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLTPPGQRV-RH 591 NAVNGYIDSSKDANARLGGGNLTPGIRQGLEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLTPPGQ V RH Sbjct: 429 NAVNGYIDSSKDANARLGGGNLTPGIRQGLEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLTPPGQTVWRH 570
BLAST of EWM28665.1 vs. NCBI_GenBank
Match: gi|873220484|emb|CEM35487.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 214.157 bits (544), Expect = 8.046e-62 Identity = 118/221 (53.39%), Postives = 145/221 (65.61%), Query Frame = 0 Query: 10 VSTASAFLAPVPMHTRT---------QGRMYMADQAPVDEEVRSIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKHGRVAMLAVVGVLVQELYQWNENFPSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKFEGRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQASIS-DKPILEQTFDNRATTPPLARGGGDPLP 220 V + AF++P P +RT +G++ M D +S+ALPFA KP NLNGEL GDVGFDPF F++ D+A+ R ELKHGRV MLA +GVLVQ Y+WNE FPSKNFLEA TAP LG++QL + + A + F GR+PGD GFDPLRLS +G+RENWQ+ ELKHGRLAMI FL VVQ + D+ I+E T N A T L G G P Sbjct: 14 VQASHAFVSP-PGGSRTGLRDPQRPSRGQISMQDIE------KSVALPFARKPDNLNGELVGDVGFDPFGFTNNQDLARMREVELKHGRVCMLATLGVLVQSTYRWNEAFPSKNFLEAPLTAPTLGMIQLLLVISAIEYYNGNFVGRIPGDRGFDPLRLSREGIRENWQLMELKHGRLAMIGFLGMVVQQLLRPDESIVEMTI-NWAKT--LGEGQGITTP 224
BLAST of EWM28665.1 vs. NCBI_GenBank
Match: gi|299116163|emb|CBN76070.1| (Light harvesting complex protein [Ectocarpus siliculosus]) HSP 1 Score: 186.037 bits (471), Expect = 2.242e-51 Identity = 103/210 (49.05%), Postives = 135/210 (64.29%), Query Frame = 0 Query: 5 ALATIVSTASAFLAPVPMHTRTQGRMYMADQAPVDEEVRSIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKHGRVAMLAVVGVLVQEL-------YQWNENFPSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKF---EGRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQA-SISDKPILEQTFD 203 ALA ++AF+ P + R R D + SIALPF +P+NLNGEL GDVGFDP FS++GD+AK+R AELKHGRVAML VVG + QE Y P+KN +A+ AP L +LQ+ VF+G +D+ ++K+ +GRVPGDIGFDPL+LS DG+ E W +AELKHGRLAM A A ++Q + DK LE T++ Sbjct: 7 ALALGAVGSNAFVTPNAVVGRVASRSARQVSMAADPDA-SIALPFTPRPENLNGELVGDVGFDPLNFSEEGDLAKYRRAELKHGRVAMLGVVGAIWQEFSVLPGLGYT-----PTKNLFQAVADAPWLAVLQVVVFVGIFDLQSTKYDIEQGRVPGDIGFDPLKLSKDGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLELTYE 210
BLAST of EWM28665.1 vs. NCBI_GenBank
Match: gi|298707844|emb|CBJ30250.1| (RNA polymerase 1-4 RNA polymerase I large subunit [Ectocarpus siliculosus]) HSP 1 Score: 176.022 bits (445), Expect = 1.110e-42 Identity = 93/169 (55.03%), Postives = 116/169 (68.64%), Query Frame = 0 Query: 428 IKDFLQEVLSCKTCDRCSAPKT----TNAVNGYIDSSKDANARLGGGNLTPGIRQGLEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLTPPGQRV-RH 591 + + L+ S K D S T VN Y+DSSKD G + PG+RQ LEKKEGLFR HMMGKRVN+ACRSVISPDPY+GT+EIG+PLRFAK LTY QPV +N +R+ VE G +PGAN+VED+ GR++ L R+ +RR +AARLL+ PGQ+V RH Sbjct: 430 LNESLKNAASLKGKDLASVLTTWVELQTTVNCYMDSSKDPR---GLKDTPPGLRQVLEKKEGLFRKHMMGKRVNYACRSVISPDPYVGTTEIGIPLRFAKELTYPQPVADWNVEAMRQLVENGTSVYPGANFVEDSSGRMLHLDRLSDLKRRGVAARLLSSPGQKVWRH 595 HSP 2 Score: 159.073 bits (401), Expect = 4.249e-37 Identity = 80/205 (39.02%), Postives = 115/205 (56.10%), Query Frame = 0 Query: 258 FGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDARSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLAHEADSLDQAL--FRADLHRSTILRD--------TEMRLRRHL------QTAGQVPKSWIPGETKIKRRALIKDFLQEVLSCKTCDRCSA 446 FG +++I RLSV R+++ T+D L NPLPGGLYDP +GP+D +C TC ++CPGHMGH L++ VY+P+ FG +++ LR KCF CH RLS V A+K+ L+DAG A EA LD L + D R + D + + R H+ AG W G + RR L ++ ++ + +CK C+ C A Sbjct: 17 FGFLTDDDIRRLSVKRITSPVTFDTLNNPLPGGLYDPVLGPVDKMMMCETCGQDQKNCPGHMGHIELAVSVYHPILFGALYKLLRAKCFSCHNLRLSKSKTRVAAVKMMLVDAGRAQEALELDATLLGYLKDGARDHDVLDGNTEDTLVSATKYRDHVLGCLEEDLAGAPRAEWCGGHNRQLRRQLAENLIKAMGACKRCENCGA 221
BLAST of EWM28665.1 vs. NCBI_GenBank
Match: gi|953498801|emb|CEG39851.1| (dna-directed rna polymerase i subunit rpa1 [Plasmopara halstedii]) HSP 1 Score: 160.999 bits (406), Expect = 1.394e-37 Identity = 80/133 (60.15%), Postives = 98/133 (73.68%), Query Frame = 0 Query: 451 NAVNGYIDSSKDANARLGGGNLTPGIRQGLEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLT 583 NAVN +DSSK G ++ GI+Q +EKKEGLFR HMMGKRVN+A RSVISPDPYIGTS+IG+PLRFAK LTY QPVTP+N ++R+ V G + HPGAN+VE GRLIDL + +R A++ LLT Sbjct: 424 NAVNLLVDSSKGK----PGTDVAQGIKQIIEKKEGLFRKHMMGKRVNYAARSVISPDPYIGTSQIGVPLRFAKTLTYPQPVTPWNVKEMRQLVINGPDVHPGANFVESENGRLIDLSKRTPHQREAISKTLLT 552 HSP 2 Score: 125.561 bits (314), Expect = 4.403e-26 Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 0 Query: 258 FGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDARSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLAHEADSLDQALF-----------RADLHRSTILRDTE-MRLRRHLQTAGQVPKSW-IPGETKIKRRALIKDFLQEVLSCKTCDRCSA 446 FG Y + EI LSV ++++ ++D L NP+ GGLYDPA+GP+D IC TC+ + ++CPGH+GH L + VYNP+ F + L+ KCF CH FR+++ V+ +K+ LID G +A L + L R + IL + E + L + G+V +P ++ R L +FL+ C+ C A Sbjct: 19 FGFYSDAEIRDLSVKQITSRLSFDSLNNPVVGGLYDPALGPVDFNMICPTCHQTQKECPGHLGHIELPVPVYNPVLFSQLLTLLKRKCFTCHKFRVASACSRVVRVKILLIDNGYEDDAAQLGELLEQRNGVEDEPPQRTFQRQQAILDEYERLALSKSRSDNGKVQLLCPLPRAAEVSREKLATEFLKN--KTGKCENCGA 218
BLAST of EWM28665.1 vs. NCBI_GenBank
Match: gi|224002505|ref|XP_002290924.1| (DNA directed RNA polymerase i, alpha subunit [Thalassiosira pseudonana CCMP1335] >gi|220972700|gb|EED91031.1| DNA directed RNA polymerase i, alpha subunit [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 159.844 bits (403), Expect = 2.716e-37 Identity = 89/168 (52.98%), Postives = 107/168 (63.69%), Query Frame = 0 Query: 426 ALIKDFLQEVLSCKTCDRCSAP------KTTNAVNGYIDSSKDANARLGGGNLTP-GIRQGLEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLTPPG 586 A I + QE K D+ A VN ++DS++D G N P GIRQ LEKKEG+FR HMMGKRVNFACRSVISPDPYIGT+EIGLPL FAK LT+ PVT N A++R+ V+RG +PGA +VE G+ IDL +M G R A+AARLL G Sbjct: 395 ATIHELTQEEADLKNTDKGQANMLEIWVDLQTTVNCFMDSTRDPK---GTANNAPNGIRQLLEKKEGIFRKHMMGKRVNFACRSVISPDPYIGTNEIGLPLYFAKTLTFPTPVTALNIAEMRKLVQRGPLQYPGAVWVEFPNGQRIDLSKMKEGNRHAIAARLLADNG 559 HSP 2 Score: 121.324 bits (303), Expect = 1.043e-24 Identity = 73/219 (33.33%), Postives = 104/219 (47.49%), Query Frame = 0 Query: 258 FGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDA-----RSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLAHEADSLDQAL-------------------FRADLHRSTI-----LRDTEMRLR-RHLQTAGQVPKSWIPGETKIKRRALIKDFLQEVLSCKTCDRCSA 446 FGVY ++E+ + SV +S++ YD L PLP GLYDP +GP + C+TC CPGH GH L + VY+PL F + +++KC CH FRLS C V KL L+D G EA LD+ + + ++ S L D +M LR Q+A +V + + RR ++K+F Q C C C+A Sbjct: 18 FGVYTDDEVRQRSVCEISSSVAYDALNTPLPRGLYDPLLGPTAGGGGGASAYCITCGNVQNLCPGHFGHIELCVPVYHPLFFPKLLLFMKMKCLACHHFRLSKRACRVFCTKLHLVDVGRMGEAMGLDEEMAALASKASVGGGDGKMSKQVKQEMMSSAAVLIDELLDQKMALRPPDGQSAEEVTHTM---HERAVRRKILKEFQQACTKCLKCANCNA 233
BLAST of EWM28665.1 vs. NCBI_GenBank
Match: gi|566007777|gb|ETI30688.1| (hypothetical protein F443_22206 [Phytophthora parasitica P1569] >gi|567945274|gb|ETK71085.1| hypothetical protein L915_21605 [Phytophthora parasitica] >gi|567973879|gb|ETL24531.1| hypothetical protein L916_21474 [Phytophthora parasitica] >gi|568003401|gb|ETL77751.1| hypothetical protein L917_21326 [Phytophthora parasitica] >gi|568033302|gb|ETM31017.1| hypothetical protein L914_21329 [Phytophthora parasitica] >gi|570935225|gb|ETP00482.1| hypothetical protein F441_22110 [Phytophthora parasitica CJ01A1] >gi|570965520|gb|ETP28639.1| hypothetical protein F442_22078 [Phytophthora parasitica P10297] >gi|970651340|gb|KUF90180.1| DNA-directed RNA polymerase [Phytophthora nicotianae]) HSP 1 Score: 159.073 bits (401), Expect = 5.401e-37 Identity = 79/133 (59.40%), Postives = 97/133 (72.93%), Query Frame = 0 Query: 451 NAVNGYIDSSKDANARLGGGNLTPGIRQGLEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLT 583 NAVN +DSSK G ++ GI+Q +EKKEGLFR HMMGKRVN+A RSVISPDPYI TS+IG+PLRFAK LTY QPVTP+N ++R+ V G + HPGAN+VE GRLIDL + +R A++ LLT Sbjct: 425 NAVNLLVDSSKAK----PGTDVAQGIKQVIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVTNGPDVHPGANFVESENGRLIDLSKRTPHQREAISKTLLT 553 HSP 2 Score: 127.872 bits (320), Expect = 7.573e-27 Identity = 56/126 (44.44%), Postives = 84/126 (66.67%), Query Frame = 0 Query: 258 FGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDARSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLAHEADSLDQAL 383 FG Y + EI LSV ++++ ++D L NP+ GGLYDPA+GP+D IC TC+ + ++CPGH+GH L + VYNP+ FG + L+ KCF CH FR+++ V+ +K+ L+D G +EA L + L Sbjct: 19 FGFYSDVEIRDLSVKQLTSRLSFDSLNNPVVGGLYDPALGPVDFNMICPTCHQTQKECPGHLGHIELPVPVYNPVLFGQMLNLLKRKCFTCHKFRVASARSRVVRVKILLLDNGFDNEAAQLGELL 144
BLAST of EWM28665.1 vs. NCBI_GenBank
Match: gi|675213153|ref|XP_008915461.1| (hypothetical protein PPTG_18968 [Phytophthora parasitica INRA-310] >gi|568084303|gb|ETM99238.1| hypothetical protein PPTG_18968 [Phytophthora parasitica INRA-310]) HSP 1 Score: 159.073 bits (401), Expect = 5.450e-37 Identity = 79/133 (59.40%), Postives = 97/133 (72.93%), Query Frame = 0 Query: 451 NAVNGYIDSSKDANARLGGGNLTPGIRQGLEKKEGLFRMHMMGKRVNFACRSVISPDPYIGTSEIGLPLRFAKVLTYSQPVTPFNAAQLREAVERGAEGHPGANYVEDARGRLIDLRRMDAGRRRALAARLLT 583 NAVN +DSSK G ++ GI+Q +EKKEGLFR HMMGKRVN+A RSVISPDPYI TS+IG+PLRFAK LTY QPVTP+N ++R+ V G + HPGAN+VE GRLIDL + +R A++ LLT Sbjct: 425 NAVNLLVDSSKAK----PGTDVAQGIKQVIEKKEGLFRKHMMGKRVNYAARSVISPDPYISTSQIGVPLRFAKTLTYPQPVTPWNVEEMRQLVTNGPDVHPGANFVESENGRLIDLSKRTPHQREAISKTLLT 553 HSP 2 Score: 127.872 bits (320), Expect = 7.439e-27 Identity = 56/126 (44.44%), Postives = 84/126 (66.67%), Query Frame = 0 Query: 258 FGVYKEEEILRLSVVRVSTAATYDRLGNPLPGGLYDPAMGPLDARSICVTCNLSMRDCPGHMGHFPLSLHVYNPLTFGIVFQALRVKCFGCHGFRLSTFPCNVLALKLGLIDAGLAHEADSLDQAL 383 FG Y + EI LSV ++++ ++D L NP+ GGLYDPA+GP+D IC TC+ + ++CPGH+GH L + VYNP+ FG + L+ KCF CH FR+++ V+ +K+ L+D G +EA L + L Sbjct: 19 FGFYSDVEIRDLSVKQLTSRLSFDSLNNPVVGGLYDPALGPVDFNMICPTCHQTQKECPGHLGHIELPVPVYNPVLFGQMLNLLKRKCFTCHKFRVASARSRVVRVKILLLDNGFDNEAAQLGELL 144 The following BLAST results are available for this feature:
BLAST of EWM28665.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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