EWM28819.1, cds1971 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28819.1 vs. NCBI_GenBank
Match: gi|585111242|gb|EWM28819.1| (hypothetical protein Naga_100002g42 [Nannochloropsis gaditana]) HSP 1 Score: 1699.1 bits (4399), Expect = 0.000e+0 Identity = 894/894 (100.00%), Postives = 894/894 (100.00%), Query Frame = 0
Query: 1 MDRRRWSPCTQCAGSAAQSLFVLILVVVSCVEGFRFSFPTKRNRLPSPKLVLFATDTDAKLGGVNVTVPSIPGPNKALTNNDEEKIALTRPTSEVSSRPKVGVSAPPSSSESSKVVAAPTPAKSTSAPVKDPTPKPIFGSKKSVDAIPGEAPTKPKSADKPQKPVKPLDRARLIEEIATAIGGTAVGFILGTWLERQAQSDEATLTAASGATVLGLVSYIVSRADNLAGVAVRKSLGGATLGLVRGATGAVTGVVSGAINGIKRGVQQKVEDLKNTPGRILDGIKASLNARVEEVKALPARTADAAKRKAQATAEEIAAVPGRTAQAISNSVVESVEGVKAALSETIDGVARAPSELMARVTGETPSSPLPRPKPSSTPPLPDKPALTPPKAAATLKIGGKPISAAASPSSSSPRSVPTKPAAPVLKFGGQSPSPRSTPSKAISTSSLGKGGPRREAPASPAPVLGGAKGQETKKPLTPSKPKLSASTSATSAPQVSGSPFPSFKSGPARSKPATASQTRNKGKEAPVLAKKEGSSVFGRLFAPTQEPKAKVPPPPPASIPAPAEKPQAPAASPSLFAGLFGSGASASPKKAISPLTSPKNKPVTAAGKARTAAPPLTNKPVTPAPLTASKAPPRPPSTAPKPSVTPKKPLNYKFSPPVRPKSSISPLLLKPGAKASEKVEEENNAAPAPKKIVYRSPPPPSRPALASFPKIKSLASAPPKETPVSPPVPDKASGAGPFAGLFGGRPLSSSSKGSNSIGKAKAGKAPSKPLPPMAMPESAEPALKSANDSKGQFTGIFGTSPTRTPSPPKPQIMKPAAIDDKKSSQDAGASGGIGVFGGLFGKAKVETKKAQQVPKKPEGSAKSGKLDEVSLLSLKQTIRREQKQALKSLGKKN 894
MDRRRWSPCTQCAGSAAQSLFVLILVVVSCVEGFRFSFPTKRNRLPSPKLVLFATDTDAKLGGVNVTVPSIPGPNKALTNNDEEKIALTRPTSEVSSRPKVGVSAPPSSSESSKVVAAPTPAKSTSAPVKDPTPKPIFGSKKSVDAIPGEAPTKPKSADKPQKPVKPLDRARLIEEIATAIGGTAVGFILGTWLERQAQSDEATLTAASGATVLGLVSYIVSRADNLAGVAVRKSLGGATLGLVRGATGAVTGVVSGAINGIKRGVQQKVEDLKNTPGRILDGIKASLNARVEEVKALPARTADAAKRKAQATAEEIAAVPGRTAQAISNSVVESVEGVKAALSETIDGVARAPSELMARVTGETPSSPLPRPKPSSTPPLPDKPALTPPKAAATLKIGGKPISAAASPSSSSPRSVPTKPAAPVLKFGGQSPSPRSTPSKAISTSSLGKGGPRREAPASPAPVLGGAKGQETKKPLTPSKPKLSASTSATSAPQVSGSPFPSFKSGPARSKPATASQTRNKGKEAPVLAKKEGSSVFGRLFAPTQEPKAKVPPPPPASIPAPAEKPQAPAASPSLFAGLFGSGASASPKKAISPLTSPKNKPVTAAGKARTAAPPLTNKPVTPAPLTASKAPPRPPSTAPKPSVTPKKPLNYKFSPPVRPKSSISPLLLKPGAKASEKVEEENNAAPAPKKIVYRSPPPPSRPALASFPKIKSLASAPPKETPVSPPVPDKASGAGPFAGLFGGRPLSSSSKGSNSIGKAKAGKAPSKPLPPMAMPESAEPALKSANDSKGQFTGIFGTSPTRTPSPPKPQIMKPAAIDDKKSSQDAGASGGIGVFGGLFGKAKVETKKAQQVPKKPEGSAKSGKLDEVSLLSLKQTIRREQKQALKSLGKKN
Sbjct: 1 MDRRRWSPCTQCAGSAAQSLFVLILVVVSCVEGFRFSFPTKRNRLPSPKLVLFATDTDAKLGGVNVTVPSIPGPNKALTNNDEEKIALTRPTSEVSSRPKVGVSAPPSSSESSKVVAAPTPAKSTSAPVKDPTPKPIFGSKKSVDAIPGEAPTKPKSADKPQKPVKPLDRARLIEEIATAIGGTAVGFILGTWLERQAQSDEATLTAASGATVLGLVSYIVSRADNLAGVAVRKSLGGATLGLVRGATGAVTGVVSGAINGIKRGVQQKVEDLKNTPGRILDGIKASLNARVEEVKALPARTADAAKRKAQATAEEIAAVPGRTAQAISNSVVESVEGVKAALSETIDGVARAPSELMARVTGETPSSPLPRPKPSSTPPLPDKPALTPPKAAATLKIGGKPISAAASPSSSSPRSVPTKPAAPVLKFGGQSPSPRSTPSKAISTSSLGKGGPRREAPASPAPVLGGAKGQETKKPLTPSKPKLSASTSATSAPQVSGSPFPSFKSGPARSKPATASQTRNKGKEAPVLAKKEGSSVFGRLFAPTQEPKAKVPPPPPASIPAPAEKPQAPAASPSLFAGLFGSGASASPKKAISPLTSPKNKPVTAAGKARTAAPPLTNKPVTPAPLTASKAPPRPPSTAPKPSVTPKKPLNYKFSPPVRPKSSISPLLLKPGAKASEKVEEENNAAPAPKKIVYRSPPPPSRPALASFPKIKSLASAPPKETPVSPPVPDKASGAGPFAGLFGGRPLSSSSKGSNSIGKAKAGKAPSKPLPPMAMPESAEPALKSANDSKGQFTGIFGTSPTRTPSPPKPQIMKPAAIDDKKSSQDAGASGGIGVFGGLFGKAKVETKKAQQVPKKPEGSAKSGKLDEVSLLSLKQTIRREQKQALKSLGKKN 894
BLAST of EWM28819.1 vs. NCBI_GenBank
Match: gi|397640612|gb|EJK74213.1| (hypothetical protein THAOC_04121, partial [Thalassiosira oceanica]) HSP 1 Score: 65.855 bits (159), Expect = 3.155e-7 Identity = 29/69 (42.03%), Postives = 45/69 (65.22%), Query Frame = 0
Query: 264 RGVQQKVEDLKNTPGRILDGIKASLNARVEEVKALPARTADAAKRKAQATAEEIAAVPGRTAQAISNSV 332
+ V+ V+++K TPG+I D K ++ VEE+KA P + DA KRK T EEI A PGR A+++ +++
Sbjct: 329 KKVEDTVDEIKATPGKIADAAKQKVDDTVEEIKATPGKVVDATKRKVDETVEEIKATPGRIAESVEDAI 397 The following BLAST results are available for this feature:
BLAST of EWM28819.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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