EWM28795.1, cds1970 (CDS) Nannochloropsis gaditana

Overview
NameEWM28795.1
Unique Namecds1970
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:605834..606077 -
Alignment locationCM002458.1:605011..605537 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28795.1
Productprotein kinase c1 inhibitor
Orig transcript idgnl|cribi|Naga_100002g43.4914.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:605834..606077 -
CM002458.1supercontigCM002458.1:605011..605537 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR011146HIT-like
IPR001310Histidine_triad_HIT
Homology
BLAST of EWM28795.1 vs. NCBI_GenBank
Match: gi|585111218|gb|EWM28795.1| (protein kinase c1 inhibitor [Nannochloropsis gaditana])

HSP 1 Score: 540.421 bits (1391), Expect = 0.000e+0
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
Query:    1 MTKQRAMMFEPYVCGTQVRVHFMRGLNSSVKRCWKNIFERKKSRAESFGVLVTCFRSLTSQPAIPNPNSNNYLRRLNMFCTYRRNGLLCLTALSTEGQFGTTSTLVVLFPNFHPKLMGEGNCVFCSIAARNAPAHRVYEDDMTLAFLDTNPLADFHTLLIPKRHVTSFEDCDDAAAAAMGVSLKRLSCIMRELRGDFNILLSNGKKAGQEVWHSHFHLIPREGRQDGLGYRWKAGQLPAQVEITDFCDKAMALYKS 256
            MTKQRAMMFEPYVCGTQVRVHFMRGLNSSVKRCWKNIFERKKSRAESFGVLVTCFRSLTSQPAIPNPNSNNYLRRLNMFCTYRRNGLLCLTALSTEGQFGTTSTLVVLFPNFHPKLMGEGNCVFCSIAARNAPAHRVYEDDMTLAFLDTNPLADFHTLLIPKRHVTSFEDCDDAAAAAMGVSLKRLSCIMRELRGDFNILLSNGKKAGQEVWHSHFHLIPREGRQDGLGYRWKAGQLPAQVEITDFCDKAMALYKS
Sbjct:    1 MTKQRAMMFEPYVCGTQVRVHFMRGLNSSVKRCWKNIFERKKSRAESFGVLVTCFRSLTSQPAIPNPNSNNYLRRLNMFCTYRRNGLLCLTALSTEGQFGTTSTLVVLFPNFHPKLMGEGNCVFCSIAARNAPAHRVYEDDMTLAFLDTNPLADFHTLLIPKRHVTSFEDCDDAAAAAMGVSLKRLSCIMRELRGDFNILLSNGKKAGQEVWHSHFHLIPREGRQDGLGYRWKAGQLPAQVEITDFCDKAMALYKS 256          
BLAST of EWM28795.1 vs. NCBI_GenBank
Match: gi|1176150075|gb|OQX67650.1| (diadenosine tetraphosphate hydrolase [Sorangiineae bacterium NIC37A_2])

HSP 1 Score: 112.849 bits (281), Expect = 7.669e-28
Identity = 56/133 (42.11%), Postives = 81/133 (60.90%), Query Frame = 0
Query:  121 NCVFCSIAARNAPAHRVYEDDMTLAFLDTNPLADFHTLLIPKRHVTSFEDCDDAAAAAMGVSLKRLSCIMRELRG--DFNILLSNGKKAGQEVWHSHFHLIPREGRQDGLGYRWKAGQLPAQVEITDFCDKAM 251
              +F  I     P+H+VYEDD  LAFLD  PL+  HTL+IPK+ V +  +  D +AAA+G  L RL   ++++ G  D+NIL +NG  A Q V+H HFH+IP+   ++GLG  WK G+L    E+     +A+
Sbjct:    3 ETIFSKIIRGEIPSHKVYEDDHVLAFLDIGPLSRGHTLVIPKQAVKTVGELSDESAAAIGRVLPRLCRAVQKVTGCEDYNILQNNGAPAHQAVFHVHFHIIPKPNAEEGLGIVWKPGKLENGAELAREIQEAL 135          
BLAST of EWM28795.1 vs. NCBI_GenBank
Match: gi|1148814236|ref|WP_077540001.1| (hypothetical protein [Phycisphaerae bacterium L21-RPul-D3] >gi|1146074151|gb|AQQ09404.1| HIT-like protein [Phycisphaerae bacterium L21-RPul-D3])

HSP 1 Score: 110.923 bits (276), Expect = 3.821e-27
Identity = 58/138 (42.03%), Postives = 81/138 (58.70%), Query Frame = 0
Query:  121 NCVFCSIAARNAPAHRVYEDDMTLAFLDTNPLADFHTLLIPKRHVTSFEDCDDAAAAAMGVSLKRLSCIMRELRGD--FNILLSNGKKAGQEVWHSHFHLIPREGRQDGLGYRWKAGQLPAQVEITDFCDKAMALYKS 256
            +CVFC I A   P  +VYED   LAF+D NPLA+FHTL+IPK+H+    DC    ++A+G +L ++S  +++       N+L +N   AGQ V H HFH+IPR    DG+   W A QLP + ++    DK   L  S
Sbjct:    2 DCVFCKIIAGEIPCSKVYEDQNLLAFMDINPLAEFHTLVIPKKHIEFLWDCPSEISSALGEALPKISRAVQKASASDGCNVLNNNASAAGQVVPHIHFHIIPR-FENDGVFTEWPAKQLPVE-KVQQAADKIKVLIDS 137          
BLAST of EWM28795.1 vs. NCBI_GenBank
Match: gi|931380472|gb|KPJ70876.1| (hypothetical protein AMS14_09875 [Planctomycetes bacterium DG_20] >gi|931466464|gb|KPK48660.1| hypothetical protein AMK72_06385 [Planctomycetes bacterium SM23_25])

HSP 1 Score: 108.997 bits (271), Expect = 2.449e-26
Identity = 55/118 (46.61%), Postives = 72/118 (61.02%), Query Frame = 0
Query:  121 NCVFCSIAARNAPAHRVYEDDMTLAFLDTNPLADFHTLLIPKRHVTSFEDCDDAAAAAMGVSLKRLSCIMRELRG--DFNILLSNGKKAGQEVWHSHFHLIPREGRQDGLGYRWKAGQ 236
            +C+FC +AA   P  RV+EDD+ LAF+D  PLAD HTLLIPK+H     +      A +G  L  L+  ++E  G    N+L +NG+ +GQ V H HFH IPR    DGLGYRW A +
Sbjct:    3 DCIFCRVAAGEIPCTRVFEDDLCLAFMDIGPLADGHTLLIPKKHYEFLHEMPPREVAHLGTHLPALARAVQEAMGAEGLNVLQNNGRVSGQAVPHVHFHFIPRVA-GDGLGYRWPAKE 119          
BLAST of EWM28795.1 vs. NCBI_GenBank
Match: gi|1189697933|ref|WP_085756301.1| (hypothetical protein [Phycisphaerae bacterium ST-PulAB-D4] >gi|1188495968|gb|ARN57676.1| HIT-like protein [Phycisphaerae bacterium ST-PulAB-D4])

HSP 1 Score: 108.612 bits (270), Expect = 3.304e-26
Identity = 55/119 (46.22%), Postives = 73/119 (61.34%), Query Frame = 0
Query:  121 NCVFCSIAARNAPAHRVYEDDMTLAFLDTNPLADFHTLLIPKRHVTSFEDCDDAAAAAMGVSLKRLSCIMRELRGD--FNILLSNGKKAGQEVWHSHFHLIPREGRQDGLGYRWKAGQL 237
            +CVFC I A   P  +VYEDD  LAF+D NPLA++HTL+IPK H     DC    +AA+G +L ++S  +++  G    N+L +N   AGQ V H HFH+IPR    DG+   W A QL
Sbjct:    2 DCVFCKIIAGQIPCSKVYEDDNVLAFMDINPLAEYHTLVIPKEHFEFLWDCPAELSAAIGSALPKISRAVQKASGSDGCNVLNNNASAAGQAVPHIHFHIIPR-FENDGVFTEWPAKQL 119          
BLAST of EWM28795.1 vs. NCBI_GenBank
Match: gi|40069025|gb|AAR39360.1| (NEQ519 [Nanoarchaeum equitans Kin4-M])

HSP 1 Score: 106.686 bits (265), Expect = 1.771e-25
Identity = 44/104 (42.31%), Postives = 67/104 (64.42%), Query Frame = 0
Query:  122 CVFCSIAARNAPAHRVYEDDMTLAFLDTNPLADFHTLLIPKRHVTSFEDCDDAAAAAMGVSLKRLSCIMRELRGDFNILLSNGKKAGQEVWHSHFHLIPREGRQ 225
            C+FC I  +  PA+ VYEDD  +A LD  P+A  HTL+IPK+HVT  ++  +  A  +   LK++   + ++  D+NI+++ G KAGQE+ H H H+IPR G +
Sbjct:    2 CIFCKIINKEIPAYIVYEDDFVIAILDIYPMAKGHTLVIPKKHVTRLKELSEEEAKKLFAGLKKVIEKIEKISPDYNIIINQGPKAGQEIDHLHIHIIPRTGEE 105          
BLAST of EWM28795.1 vs. NCBI_GenBank
Match: gi|931471576|gb|KPK53225.1| (diadenosine tetraphosphate hydrolase [Myxococcales bacterium SG8_38_1])

HSP 1 Score: 106.301 bits (264), Expect = 2.848e-25
Identity = 53/119 (44.54%), Postives = 71/119 (59.66%), Query Frame = 0
Query:  121 NCVFCSIAARNAPAHRVYEDDMTLAFLDTNPLADFHTLLIPKRHVTSFEDCDDAAAAAMGVSLKRLSCIMRELRG--DFNILLSNGKKAGQEVWHSHFHLIPREGRQDGLGYRWKAGQL 237
            + +F  I   + P H+VYEDD+ LAFLD  PL+  HTL+IPK  V + +   D  AAA+G  L RL   +R + G   FNIL +NG  A Q V+H HFH+IP+     GLG  W + +L
Sbjct:    3 DTIFSKILRGDIPCHKVYEDDLILAFLDIGPLSYGHTLIIPKEEVATLDQLSDDTAAAIGRILPRLCRAIRTVTGVDQFNILQNNGPMAHQAVFHVHFHIIPKPSVDQGLGIEWPSRKL 121          
BLAST of EWM28795.1 vs. NCBI_GenBank
Match: gi|1148617843|ref|WP_077363438.1| (HIT domain-containing protein [Fictibacillus arsenicus] >gi|1145962433|gb|OOE13004.1| HIT family protein [Fictibacillus arsenicus])

HSP 1 Score: 106.686 bits (265), Expect = 3.268e-25
Identity = 50/127 (39.37%), Postives = 73/127 (57.48%), Query Frame = 0
Query:  115 KLMGEGNCVFCSIAARNAPAHRVYEDDMTLAFLDTNPLADFHTLLIPKRHVTSFEDCDDAAAAAMGVSLKRLSCIMRELRG--DFNILLSNGKKAGQEVWHSHFHLIPREGRQDGLGYRWKAGQLPA 239
            +L  + NC+FC I     P+H+VYEDD  LAFLD + +   HTL+IPK H     +  +  AA +  ++ +++  +++       N+L +NG+ AGQ V+H H H IPR G  DG G  WK   LPA
Sbjct:   10 RLSHDSNCIFCKIVEGVIPSHKVYEDDNVLAFLDISQVTKGHTLIIPKEHSKDVFELSEETAAKLFSAVPKIASSIKQTFNPIGLNLLNNNGEAAGQSVFHYHMHFIPRYGSGDGFGAVWKTQDLPA 136          
BLAST of EWM28795.1 vs. NCBI_GenBank
Match: gi|1123555135|ref|WP_074260140.1| (HIT domain-containing protein [Agromyces cerinus] >gi|1116068243|emb|SIN94214.1| histidine triad (HIT) family protein [Agromyces cerinus subsp. cerinus])

HSP 1 Score: 105.916 bits (263), Expect = 4.426e-25
Identity = 53/114 (46.49%), Postives = 73/114 (64.04%), Query Frame = 0
Query:  121 NCVFCSIAARNAPAHRVYEDDMTLAFLDTNPLADFHTLLIPKRHVTSFEDCDDAAAAAMGVSLKRLSCIM-RELRGD-FNILLSNGKKAGQEVWHSHFHLIPREGRQDGLGYRW 232
            +CVFC+I A   PAHRVYED++T+AFL+ +P A  HTLLIP+ H        DAAAA +G SL+R++ ++  EL  D   +  +NG    Q ++H HFHL+PR  R+D L   W
Sbjct:    4 DCVFCAIVAGGVPAHRVYEDELTIAFLNIHPAAPGHTLLIPREHAPQLWHLSDAAAAGLGRSLRRVAGVVTTELEPDGMTVFQANGAAGWQSIFHVHFHLVPRM-REDQLVPAW 116          
BLAST of EWM28795.1 vs. NCBI_GenBank
Match: gi|503789624|ref|WP_014023618.1| (HIT family protein [Borreliella bissettii] >gi|342222380|gb|AEL18558.1| HIT family protein [Borreliella bissettii DN127])

HSP 1 Score: 105.531 bits (262), Expect = 4.856e-25
Identity = 52/126 (41.27%), Postives = 78/126 (61.90%), Query Frame = 0
Query:  121 NCVFCSIAARNAPAHRVYEDDMTLAFLDTNPLADFHTLLIPKRHVTSFEDCDDAAAAAMGVSLKRLSCIMRELR----GDFNILLSNGKKAGQEVWHSHFHLIPREGRQDGLGYRWKAGQLPAQVE 242
            NC+FC I  +  P+++VYEDD+ LAFLD NPL   HTL+IPK H  +  + DD  +  +    K++S  ++++     G  NI  + G  AGQEV+H+HFH+IPR  + DG G + +  +L  +VE
Sbjct:    3 NCIFCKIVNKELPSYKVYEDDLVLAFLDINPLTVGHTLVIPKEHSENLLNMDDKFSERILKVCKKISNALKKINSSIYGGINIYSALGAGAGQEVFHTHFHIIPR-FKNDGFGLK-RGNKLNLEVE 126          
The following BLAST results are available for this feature:
BLAST of EWM28795.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111218|gb|EWM28795.1|0.000e+0100.00protein kinase c1 inhibitor [Nannochloropsis gadit... [more]
gi|1176150075|gb|OQX67650.1|7.669e-2842.11diadenosine tetraphosphate hydrolase [Sorangiineae... [more]
gi|1148814236|ref|WP_077540001.1|3.821e-2742.03hypothetical protein [Phycisphaerae bacterium L21-... [more]
gi|931380472|gb|KPJ70876.1|2.449e-2646.61hypothetical protein AMS14_09875 [Planctomycetes b... [more]
gi|1189697933|ref|WP_085756301.1|3.304e-2646.22hypothetical protein [Phycisphaerae bacterium ST-P... [more]
gi|40069025|gb|AAR39360.1|1.771e-2542.31NEQ519 [Nanoarchaeum equitans Kin4-M][more]
gi|931471576|gb|KPK53225.1|2.848e-2544.54diadenosine tetraphosphate hydrolase [Myxococcales... [more]
gi|1148617843|ref|WP_077363438.1|3.268e-2539.37HIT domain-containing protein [Fictibacillus arsen... [more]
gi|1123555135|ref|WP_074260140.1|4.426e-2546.49HIT domain-containing protein [Agromyces cerinus] ... [more]
gi|503789624|ref|WP_014023618.1|4.856e-2541.27HIT family protein [Borreliella bissettii] >gi|342... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1975rna1975Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications