EWM28689.1, cds1950 (CDS) Nannochloropsis gaditana

Overview
NameEWM28689.1
Unique Namecds1950
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:567863..568081 +
Alignment locationCM002458.1:568408..568782 +
Alignment locationCM002458.1:568932..571511 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28689.1
Producthmg-box dna-binding protein 1
Orig transcript idgnl|cribi|Naga_100002g62.4808.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:567863..568081 +
CM002458.1supercontigCM002458.1:568408..568782 +
CM002458.1supercontigCM002458.1:568932..571511 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM28689.1 vs. NCBI_GenBank
Match: gi|585111112|gb|EWM28689.1| (hmg-box dna-binding protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 2181.37 bits (5651), Expect = 0.000e+0
Identity = 1057/1057 (100.00%), Postives = 1057/1057 (100.00%), Query Frame = 0
Query:    1 MEGKRVEDAESTCDQNAQSHKGAAEIPLIKDDAPLLPLALKELLVEGSCMSFAKPREGMEKFSWACSPDGEIQIIDLCTGTVAVDPTTQGPVKLTAVDGTPICLALTREQTALAIGMESGKVEFNRVSWENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIEVQSRKATPLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPGIPKSAWSPDGSVLALPGSRHPQLLERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEMRQLAVLDCMGFFGIKNVPEDAISTLLSSSVQVISELKGSKRDAATKDAAPGESRRRTQTPELERHEEKERASSNKNVETPEKRSFSLHRDKHIESTHEGGEGFEEEESAPDDEPGVLDYDHIKEERETIPPYSHLQGPFLPSSSPVDALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDSPMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAESGISRNPFAMKDAEGKKPAEKRSCSIAESLAPLMSPSPKKPVLSKSSTFVSEIRSKKKHDRRA 1057
            MEGKRVEDAESTCDQNAQSHKGAAEIPLIKDDAPLLPLALKELLVEGSCMSFAKPREGMEKFSWACSPDGEIQIIDLCTGTVAVDPTTQGPVKLTAVDGTPICLALTREQTALAIGMESGKVEFNRVSWENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIEVQSRKATPLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPGIPKSAWSPDGSVLALPGSRHPQLLERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEMRQLAVLDCMGFFGIKNVPEDAISTLLSSSVQVISELKGSKRDAATKDAAPGESRRRTQTPELERHEEKERASSNKNVETPEKRSFSLHRDKHIESTHEGGEGFEEEESAPDDEPGVLDYDHIKEERETIPPYSHLQGPFLPSSSPVDALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDSPMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAESGISRNPFAMKDAEGKKPAEKRSCSIAESLAPLMSPSPKKPVLSKSSTFVSEIRSKKKHDRRA
Sbjct:    1 MEGKRVEDAESTCDQNAQSHKGAAEIPLIKDDAPLLPLALKELLVEGSCMSFAKPREGMEKFSWACSPDGEIQIIDLCTGTVAVDPTTQGPVKLTAVDGTPICLALTREQTALAIGMESGKVEFNRVSWENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIEVQSRKATPLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPGIPKSAWSPDGSVLALPGSRHPQLLERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEMRQLAVLDCMGFFGIKNVPEDAISTLLSSSVQVISELKGSKRDAATKDAAPGESRRRTQTPELERHEEKERASSNKNVETPEKRSFSLHRDKHIESTHEGGEGFEEEESAPDDEPGVLDYDHIKEERETIPPYSHLQGPFLPSSSPVDALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDSPMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAESGISRNPFAMKDAEGKKPAEKRSCSIAESLAPLMSPSPKKPVLSKSSTFVSEIRSKKKHDRRA 1057          
BLAST of EWM28689.1 vs. NCBI_GenBank
Match: gi|585111113|gb|EWM28690.1| (hmg-box dna-binding protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 1941.78 bits (5029), Expect = 0.000e+0
Identity = 941/941 (100.00%), Postives = 941/941 (100.00%), Query Frame = 0
Query:  117 MESGKVEFNRVSWENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIEVQSRKATPLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPGIPKSAWSPDGSVLALPGSRHPQLLERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEMRQLAVLDCMGFFGIKNVPEDAISTLLSSSVQVISELKGSKRDAATKDAAPGESRRRTQTPELERHEEKERASSNKNVETPEKRSFSLHRDKHIESTHEGGEGFEEEESAPDDEPGVLDYDHIKEERETIPPYSHLQGPFLPSSSPVDALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDSPMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAESGISRNPFAMKDAEGKKPAEKRSCSIAESLAPLMSPSPKKPVLSKSSTFVSEIRSKKKHDRRA 1057
            MESGKVEFNRVSWENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIEVQSRKATPLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPGIPKSAWSPDGSVLALPGSRHPQLLERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEMRQLAVLDCMGFFGIKNVPEDAISTLLSSSVQVISELKGSKRDAATKDAAPGESRRRTQTPELERHEEKERASSNKNVETPEKRSFSLHRDKHIESTHEGGEGFEEEESAPDDEPGVLDYDHIKEERETIPPYSHLQGPFLPSSSPVDALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDSPMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAESGISRNPFAMKDAEGKKPAEKRSCSIAESLAPLMSPSPKKPVLSKSSTFVSEIRSKKKHDRRA
Sbjct:    1 MESGKVEFNRVSWENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIEVQSRKATPLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPGIPKSAWSPDGSVLALPGSRHPQLLERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEMRQLAVLDCMGFFGIKNVPEDAISTLLSSSVQVISELKGSKRDAATKDAAPGESRRRTQTPELERHEEKERASSNKNVETPEKRSFSLHRDKHIESTHEGGEGFEEEESAPDDEPGVLDYDHIKEERETIPPYSHLQGPFLPSSSPVDALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASRRPIRFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDSPMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAESGISRNPFAMKDAEGKKPAEKRSCSIAESLAPLMSPSPKKPVLSKSSTFVSEIRSKKKHDRRA 941          
BLAST of EWM28689.1 vs. NCBI_GenBank
Match: gi|553194045|ref|XP_005855882.1| (hypothetical protein NGA_2078120, partial [Nannochloropsis gaditana CCMP526] >gi|553194647|ref|XP_005856005.1| hypothetical protein NGA_2078110, partial [Nannochloropsis gaditana CCMP526] >gi|422293052|gb|EKU20353.1| hypothetical protein NGA_2078110, partial [Nannochloropsis gaditana CCMP526] >gi|422293175|gb|EKU20475.1| hypothetical protein NGA_2078120, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0
Identity = 301/302 (99.67%), Postives = 301/302 (99.67%), Query Frame = 0
Query:  756 FNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDSPMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAESGISRNPFAMKDAEGKKPAEKRSCSIAESLAPLMSPSPKKPVLSKSSTFVSEIRSKKKHDRRA 1057
            FNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQK YQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDSPMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAESGISRNPFAMKDAEGKKPAEKRSCSIAESLAPLMSPSPKKPVLSKSSTFVSEIRSKKKHDRRA
Sbjct:    1 FNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKQYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDSPMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAESGISRNPFAMKDAEGKKPAEKRSCSIAESLAPLMSPSPKKPVLSKSSTFVSEIRSKKKHDRRA 302          
BLAST of EWM28689.1 vs. NCBI_GenBank
Match: gi|553194042|ref|XP_005855881.1| (wd repeat and hmg-box dna-binding protein 1, partial [Nannochloropsis gaditana CCMP526] >gi|553194644|ref|XP_005856004.1| wd repeat and hmg-box dna-binding protein 1, partial [Nannochloropsis gaditana CCMP526] >gi|422293051|gb|EKU20352.1| wd repeat and hmg-box dna-binding protein 1, partial [Nannochloropsis gaditana CCMP526] >gi|422293174|gb|EKU20474.1| wd repeat and hmg-box dna-binding protein 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 408.683 bits (1049), Expect = 8.364e-133
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0
Query:  561 DEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVG 754
            DEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRL RNKMDSFWPVG
Sbjct:    1 DEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLRRNKMDSFWPVG 194          
BLAST of EWM28689.1 vs. NCBI_GenBank
Match: gi|356516884|ref|XP_003527122.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Glycine max] >gi|947106376|gb|KRH54759.1| hypothetical protein GLYMA_06G206800 [Glycine max])

HSP 1 Score: 286.96 bits (733), Expect = 3.535e-78
Identity = 230/821 (28.01%), Postives = 376/821 (45.80%), Query Frame = 0
Query:  104 LALTREQTALAIGMESGKVEFNRVSWENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIEV-QSRKATPLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPGIPKSAWSPDGSVLALPGSRHPQLL-ERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEM-RQLAVLDCMGFFGI-KNVPEDAISTLLSSSVQVISELKGSKRDAATKDAAPGESRRRTQTPELERHEEKERASSNKNVET-PEKRSFSLHRDKHIESTHEGGEGFEEEESAPD-------DEPGVLDYDHIKE--ERETIPPYSHLQGPFLPSSSPVD-ALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASRRPI--RFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQ----QEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRF 903
            LAL+   T LA G     V+  +      +P   FE  + R T  +R +A + +    A    D  ++LI       A  L+ H G +  L FDP  EYL SL + G V++WEL +   I + K    D+  ++   +    WSPDG  LA+PG ++  ++ +R T   V S   R  H   I  L W+P+G  +AS+G DR+++IW V +         +  +D++  +E +           + W      LAV+D MG +GI  NV              + S +K    D   K  + G      + PE    E       N N E+ P  R  S  R + +   + G +G EE  S P        + P   + D +        +   + +Q PF P S+PV    +RFL +N++G I S     ++ IEI+F D    P     TDH+ F M ++ E G+IFA       NP KG+  +       ST+ +RPF++++  ++W      +E  + VA+G+ W A  T+  ++R+F+  GLQ  V ++ GPVVT  G  + LAV  H    L+     S  Q L + + +I R  ++ QG + LSP S L W GF     L   DS+G+L S    F   W P+  +++   +  +++W  G+    + C + +  E+ P   PKP+++  P    F ++++D    +  E  F+       +LY+     + +A   L+   L+ D    +A+ D  ++++I     ++   R  EL + LTL KS+  AV++     LP +A R S ++  R 
Sbjct:   68 LALSPNSTCLASGSVDHSVKLYK------YPGGEFERNITRFTLPIRSLAFNKSGSMLAAAGDDEGIKLINTFDGTIARVLKGHKGSITGLAFDPNGEYLASLDSTGTVILWELQSGKIIHNLKGIAPDTGLDVST-MNVLCWSPDGETLAVPGLKNDVVMYDRDTAEKVLSL--RGDHIQPICFLCWSPNGKYIASSGLDRQVLIWDVDR---------KQDIDRQKFDERVCC---------MAWKPTGNALAVIDIMGKYGIWDNV--------------IPSSMKSPTEDIPVKSKSNGVVYFDEEDPENSASENSSDVGGNSNQESEPPSRKRS--RKQSLSEENSGEDGGEEIVSYPKVDTNKKRNRPSKENLDSVNMGFRGTMVTSKAKMQEPFQPGSTPVQPGKRRFLCYNMLGCITSIEHDGYSHIEIDFHDTGSTPRVPSMTDHFGFTMAALNESGSIFA-------NPCKGENNM-------STLMYRPFSSWANNSEWSMRFEGEEVKV-VALGSAWVAAVTSFNYLRIFSEGGLQRDVFSLDGPVVTASGFKDKLAVVTHATDGLL-----SNDQKLEFMVFNIPRGTLLLQGRLPLSPGSSLSWFGFSEEGQLCSYDSKGVLRSYTSKFGGRWIPLFSATKEKSD--ENYWVTGLNASKVFCVVCKKPEDFPQVMPKPVLT--PLNLSFPLASSDLGGSEAHEKEFMMNNL---RLYEIQRTMDEMASVGLDTTSLDDDAFNFEAAQDKCILRLIAACCNSDKLVRATELVKLLTLEKSMRGAVKLVTAMKLPNLAERFSSILEERL 818          
BLAST of EWM28689.1 vs. NCBI_GenBank
Match: gi|702496771|ref|XP_010037319.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Eucalyptus grandis] >gi|629082575|gb|KCW49020.1| hypothetical protein EUGRSUZ_K02631 [Eucalyptus grandis])

HSP 1 Score: 284.648 bits (727), Expect = 1.882e-77
Identity = 227/829 (27.38%), Postives = 382/829 (46.08%), Query Frame = 0
Query:  104 LALTREQTALAIGMESGKVEFNRVSWENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIE-VQSRKATPLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPGIPKSAWSPDGSVLALPGSRHPQLL-ERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEM-RQLAVLDCMGFFGIKNVPEDAISTLLSSSVQVISELKGSKRD----------------AATKDAAPGESRRRTQTPELER-------HEEKERASSNKNVETPEKRSFSLHRDKHIESTHEGGEGFEEEESAPDDEPGVLDYDHIKEERETIPPYSHLQGPFLPSSSPVD-ALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASRRPI--RFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRF 903
            LA++   T LA G     V+  +      FP   F+  + R T  +R +A + +    A    D  ++LI  +    A  L+ H G V  L FDP  EYL S+ + G V+ WEL +   + + K    +   +    I   +WSPDG  LA+PG ++  ++ +R T   + S   R  H   +  L+W+P+G  +A++G DR+++IW V +         +  +D++  +E I   S         W  +   LAV+D  G +G   V E  I + + S ++ I   + +  +                AA   + PGE       P   +       +EE+     N  + +P K  F               +G  E++ A D+        H      T+   S +Q  F P S+PV    +RFL +N++G+I +     ++ IEI+F D  + P     TDH+ F M S+ E G++FA       NP KG+K +       ST+ +RPF ++++ ++W      +E    VA+G  W A  T+   +R+FT  GLQ+ V+++ GPVVT  G  + LAV  H    L      S  Q +   + +I ++    QG + L+P S L+W GF    +L   DS+GLL    R +   W P+  +S++ R+  +S+W VG+   +L C + +  E  P   PKP++S L F  P  ++++D     LE    L+   L Q  ++ E +A   ++   LE D    +A+ D  ++++I     ++   R  EL + L+L KS+  A+++     LP +A R + ++  R 
Sbjct:   71 LAISPNSTCLASGSIDHSVKLYK------FPGGDFQTNVTRFTLPIRALAFNKSGSMLAAAGDDEGIKLINTIDGSIARVLKGHKGSVTGLAFDPNGEYLASMDSMGTVIYWELHSGATLHTLKGVAPNCGSDFS-AINVLSWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL--RGDHLQSVCYLSWSPNGKYMATSGLDRQVLIWDVDK---------KQDIDRQKFDERICCMS---------WKPIGNALAVIDTTGKYG---VWESVIPSSMKSPIEGIPNSRSNNSNGLLLFDEEDEEDEEHSAAGSISDPGEDSFGESGPPCRKRLRKKSTYEEQWEEDGNDELSSPPKPKFR--------------KGHHEKKKASDN-------GHEGLGSITLSARSKIQDAFQPGSTPVQPGKRRFLCYNMIGSITTMEQEGYSHIEIDFHDTGKGPRVPSMTDHFGFTMASINENGSVFA-------NPCKGEKNL-------STLMYRPFHSWASNSEWSMRFEGEE-VKAVALGTGWVAAITSLNLLRIFTEGGLQKHVVSLDGPVVTASGFKDELAVVTHSSDCL-----PSGDQVMECTIFNISKSTKAMQGRLPLTPGSQLLWFGFSEEGLLSSYDSKGLLRIFTRQYGGSWVPLFSASKVKRSD-ESYWVVGLNMTNLFCIICKSPELFPQVAPKPVLSLLNFLIP--LASSDIGAETLENEFILNHAHLSQIHHKMEAVAQAGMDVTSLEDDAFNVEAAQDKCILRLIASCCNSDKLARATELVKLLSLEKSVRGAIKLVTALKLPNLAERFNSILEERL 825          
BLAST of EWM28689.1 vs. NCBI_GenBank
Match: gi|645269581|ref|XP_008240062.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Prunus mume])

HSP 1 Score: 282.722 bits (722), Expect = 9.636e-77
Identity = 233/826 (28.21%), Postives = 380/826 (46.00%), Query Frame = 0
Query:  103 CLALTREQTALAIGMESGKVEFNRVSWENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIE-VQSRKATPLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPGIPKSAWSPDGSVLALPGSRHPQLL-ERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEM-RQLAVLDCMGFFGI---------KNVPEDAISTLLSSS--VQVISELKGSKRDAATKDAAPGESRRRTQTPELERHEEKERASSNKNVE--------TPEKRSFSLHRDKHIESTHEGGEGFEEEESAPDDEPGVLDYDHIKEERETIPPYSHLQGPFLPSSSPVD-ALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASRRPI--RFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRF 903
             LAL+   T LA G E   V+  +      FP   F+  + R T  +R +A + +    A    D  ++LI  V    +  L+ H G V  L FDP  EYL S+ + G V+ WEL +   + + K    +S ++ +  +   +WSPDG+ LA+PG R+  ++ +R T   + S   R  HT  I  LAW+P+G  +A++G D +++IW V Q         +  +D+   +E I           L W  +   LAV+DC G +G+         K+  ED  +  L++S  + +  E +G +   +   +  GE       P   +   K  A  N   E         P+  S    R KH ES   G EG                   +  +  ++ P   +QG F P ++P+    +RFL +N++G I +      + IEI+F D SR P      DH+ F M S+ E G++FA       NP KG+K +       ST+ +RPF +++  ++W   L  +E    VA+G  W A  T+  ++R+FT  GLQ  VL++ GPVVT  G  + LA+  H    L      S  Q L Y++L+I       +G + L+P S L W GF     L   DS+G+L      +   W P+  +S+   +  +++W VG+    L C + +  + +P   PKP+++ L F   F ++++D     LE    L+   L Q   Q EV A   L+   L+ +    + + D  ++K+I      +   R  EL + L+L KS+  A+++     LP +A R ++++  R 
Sbjct:   69 ALALSPNSTCLASGSEDHSVKLYK------FPGGEFQTNITRFTLPIRALAFNKSGTLLAAAGDDEGIKLINTVDGSISRVLKGHKGSVTGLAFDPHSEYLASIDSTGTVIYWELQSGTTLHTLKGIAPNSGFD-RSIMNVLSWSPDGNKLAVPGLRNDVVVYDRDTAETLFSL--RGDHTQPICFLAWSPNGKYMATSGLDMQVLIWDVDQ---------KQDIDRHKFDERICC---------LAWKPIGNALAVIDCTGKYGVWESVTPSSMKSPTEDVPNQKLNNSNGLLLFDEEEGEELSTSGSLSDLGEDSHGESEPPSRKRLHKHSAYDNDLEEDGFDDLSLLPKVESHKKARRKHSESVDNGKEG-------------------VSSKLTSVRP--KMQGSFQPGATPLQPGKRRFLCYNMLGAITTIEHDGFSHIEIDFHDTSRGPRVPSMNDHFGFTMASLNENGSVFA-------NPSKGEKNM-------STLMYRPFRSWANNSEWSMRLEGEE-VKVVALGTAWVAAITSLNFLRIFTDGGLQRHVLSLDGPVVTASGFMDELAIVTHASECL-----PSDEQMLEYRVLNITNGSQPLRGRLPLTPGSHLTWFGFSEEGQLSSYDSKGVLRVFTSQYGGSWLPLFSASKEKSD--ENYWVVGLNASKLFCIVCKSPDLYPQVIPKPVLTPLNFS--FPLASSDLGADALENEFMLNNMHLVQVQKQIEV-AGAGLDTTSLDDEAFNTETAQDRCILKLIASCCNGDKLVRATELVKLLSLEKSVRGAIKLVTVLKLPNLAERFNNILEERL 821          
BLAST of EWM28689.1 vs. NCBI_GenBank
Match: gi|950943131|ref|XP_014493747.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Vigna radiata var. radiata])

HSP 1 Score: 281.567 bits (719), Expect = 1.548e-76
Identity = 254/941 (26.99%), Postives = 413/941 (43.89%), Query Frame = 0
Query:  104 LALTREQTALAIGMESGKVEFNRVSWENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIEVQSRKAT-PLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPGIPKSAWSPDGSVLALPGSRHPQLL-ERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEM-RQLAVLDCMGFFGI-KNVPEDAISTLLSSSVQVISELKGSKRDAATKDAAPGESRRRTQTPELERHEEKERAS-----SNKNVETPEKRSFSLHRDKHIESTHEGGEGFEEEESAPD---------DEPGVLDYDHIKEERETIPPYSHLQGPFLPSSSPVD-ALKRFLVWNLVGNIVSQNLGDHNVIEIEFAD--ASRRPIRFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDS-PMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAESGISRNPFAMKDAEGKKPAEKRSCSIAE 1022
            LAL+   T LA G     V+  +      FP   FE  + R T  +R +A + +    A    D  ++LI       T  L+ H G V  L FDP  EYL S+ + G V++WEL +   I + K    D+  ++   +    WSPDG  LA+PG ++  ++ +R T   + S   R  H   I  L W+P+G  +A++G DR+++IW V +         +  +D++  +E +           + W  +   LAV+D MG +GI +NV              + S +K    D   K  + G         + E HE     S      N N E+ E  S    R   +   + G +G+EE    P               LD  ++      I   +  Q  F P S+P     +RFL +N++G I S     ++ IEI+F D  ++RR    TDH+ F M +++E G++FA       NP KG+K +       ST+ +RPF++++  ++W      +E  + VA+GA W A  T+  ++R+F+ SGLQ+ V ++ GPV+T  G  E LAV  H     +     S  Q L + + +I +   + QG + +SP S L W GF     L   DS+G+L S    F   W P+   S L     +++W  G+    L C + +  EE PP  PKP+++ L    P   S+    + + E +      FL Q+  + E +A   L+   L+ D    +A+ D  ++++I     +    R  EL + LTL KS+  A+++     LP +A R S ++  R           EE +N      K++ P   +   L N           P R E  +        L SP+  +  ++   G            ++GI R P   +  +GK+  E+ S  + +
Sbjct:   68 LALSPNSTCLASGSIDRSVKLYK------FPGGEFERNITRFTLPIRSLAFNKSGSMVAAAGDDEGIKLINTFDGTITRVLKGHKGSVTGLAFDPNGEYLASMDSIGTVILWELQSGKIIHNLKGIAPDTGLDVS-AVNVLCWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL--RGDHIQPICFLCWSPNGKYIATSGLDRQVLIWDVNR---------KQDIDRQRFDERVCC---------MAWKSIGNSLAVVDVMGKYGIWENV--------------IPSSMKSPTEDIPVKYKSNG-----VLLFDEEDHENSTSGSLSDIGENSNEES-EPTSRKRLRKHSLSEENLGEDGYEEIALYPKVDSHNKRNRSSKEKLDSGNMGLRGTMITSKAKRQEAFQPGSTPFQPGKRRFLCYNMLGCITSIEHDGYSHIEIDFHDTGSTRRVPSMTDHFGFTMAALSESGSVFA-------NPCKGEKNM-------STLMYRPFSSWANNSEWSMRFEGEEVKV-VALGAAWIAAVTSLNYLRIFSESGLQKHVFSLDGPVLTASGFKEKLAVVTH-----VFDCLSSNDQMLEFIVFNIPQGTQLLQGRLPISPGSSLSWFGFSEEGQLCSYDSKGVLRSYTSQFGGRWVPLF--SALKEKSNENYWVTGLNASKLFCVVCKKPEEFPPVMPKPVLTPLSLSFPLASSDLGSEVHENEFMMNNLHLFLIQR--RMEEMASVGLDTTSLDDDAFNLEAAQDKCILRLIASCCNSNKLVRATELMKLLTLEKSMRGAIKLVTALKLPNLAERFSSILEERLL---------EEAKNATETNIKENCPAPIKADALHNAS-------KAPTRTESLNAVTMSSPKLSSPSFIKKDKIQEGG------------KAGIIRTPMVNETMKGKQTGEETSDKVGD 909          
BLAST of EWM28689.1 vs. NCBI_GenBank
Match: gi|965664117|dbj|BAT79826.1| (hypothetical protein VIGAN_02276600 [Vigna angularis var. angularis])

HSP 1 Score: 280.026 bits (715), Expect = 5.796e-76
Identity = 251/942 (26.65%), Postives = 415/942 (44.06%), Query Frame = 0
Query:  104 LALTREQTALAIGMESGKVEFNRVSWENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIEVQSRKAT-PLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPGIPKSAWSPDGSVLALPGSRHPQLL-ERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEM-RQLAVLDCMGFFGI-KNVPEDAISTLLSSSVQVISELKGSKRDAATKDAAPGESRRRTQTPELERHEEKERAS-------SNKNVETPEKRSFSLHRDKHIESTHEGGEGFEEEESAPDDEPG---------VLDYDHIKEERETIPPYSHLQGPFLPSSSPVD-ALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASRRPI--RFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRFPPIADIHLSNEETENQDPRGFKDSPMSSRTSMLTNEHDLNNDDINLPERAERTDMSADHRDPLFSPARPRASQVSRIGNSSTSFVGRCDAESGISRNPFAMKDAEGKKPAEKRSCSIAE 1022
            LAL+   T LA G     V+  +      FP   FE  + R T  +R +A + +    A    D  ++LI       T  L+ H G V  L FDP  EYL S+ + G V++WEL +   I + K    D+  ++   +    WSPDG  LA+PG ++  ++ +R T   + S   R  H   I  L W+P+G  +A++G DR+++IW V +         +  +D++  +E +           + W  +   LAV+D MG +GI  NV              + S +K    D   K  + G         + E HE     S       SN+  E   ++    H    +   + G +G+EE    P  +            LD  ++      I   +  Q  F P S+P     +RFL +N++G I S     ++ IEI+F D    P     TDH+ F M +++E G++FA       NP KG+K +       ST+ +RPF++++  ++W      +E  + VA+GA W A  T+  ++R+F+ SGLQ+ V  + GPV+T  G  E LAV  H     +     S  Q L + + +I + + + QG + +SP S L W GF     L   DS+G+L S    F   W P+  +S+   N  +++W  G+    L C + +  EE P   PKP+++ L    P   S+    + + E +      FL Q+  + E +A   L+   L+ D    +A+ D  ++++I     +    R  EL + LTL KS+  A+++     LP +A R S ++  R           EE +N      K++ ++   +      D  ++ I  P R E  +          + + P+ S  S I    T   G+    +GI R P   +  +GK+  E+ S  + +
Sbjct:   68 LALSPNSTCLASGSIDRSVKLYK------FPGGEFERNITRFTLPIRSLAFNKSGSMVAAAGDDEGIKLINTFDGTITRVLKGHKGSVTGLAFDPNGEYLASMDSTGTVILWELQSGKIIHNLKGIAPDTGLDVS-AVNVLCWSPDGETLAVPGLKNDVVMYDRDTAEKLFSL--RGDHIQPICFLCWSPNGKYIATSGLDRQVLIWDVNR---------KQDIDRQRFDERVCC---------MAWKPIGNSLAVVDVMGKYGIWDNV--------------IPSSMKSPTEDIPVKYKSNG-----VLLFDEEDHENSASGSLSDIGENSNEEFEPTSRKRLRKH---SLSEENLGEDGYEEIALYPKADSHNKRNRSSKEKLDSGNMGFRGTIITSKAKRQEAFQPGSTPFQPGKRRFLCYNMLGCITSIEHDGYSHIEIDFHDTGSTPRVPSMTDHFGFTMAALSESGSVFA-------NPCKGEKNM-------STLMYRPFSSWANNSEWSMRFEGEEVKV-VALGAAWVAAVTSLNYLRIFSESGLQKHVFTLDGPVLTATGFKEKLAVVTH-----VFDCLSSNDQMLEFIVFNIPQGIQLLQGRLPISPGSSLSWFGFSEEGQLCSYDSKGVLRSYTSQFGGRWVPLFSASKEKSN--ENYWVTGLNASKLFCVVCKKPEEFPQVMPKPVLTPLSLSFPLASSDLGSEVHENEFMMNNLHLFLIQR--RMEEMASVGLDTTSLDDDAFNLEAAQDKCILRLIASCCNSNKLVRATELVKLLTLEKSMRGAIKLVTALKLPNLAERFSSILEERLL---------EEAKNATETNIKENCVAPIKA------DALHNAIKAPTRTESLNA--------VTMSSPKLSSPSFIKKDKTQEGGK----AGIIRTPMVNETMKGKQTGEETSDKVGK 909          
BLAST of EWM28689.1 vs. NCBI_GenBank
Match: gi|470130402|ref|XP_004301092.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 279.641 bits (714), Expect = 9.163e-76
Identity = 226/829 (27.26%), Postives = 383/829 (46.20%), Query Frame = 0
Query:  104 LALTREQTALAIGMESGKVEFNRVSWENGFPEFHFEDFLVRCTSAVRDIALSPTSKWAAVGSGDLELRLIE-VQSRKATPLRKHDGGVHSLCFDPKEEYLVSLGTDGCVLIWELATKHCIFSKKVFEGDSTYNLQPGIPKSAWSPDGSVLALPGSRHPQLL-ERGTWRVVDSSASRLAHTAEISVLAWAPDGHLLASAGEDRRLVIWAVPQCGGPALLPAQIYMDKESVNEGIVGASRSRALRQLQWIEMRQ-LAVLDCMGFFGI-------------KNVPEDAISTLLSSSVQVISELKGSKRDAATKDAAPGESRRRTQTPELERHEEKERASSNKNVETPEKRSFSLH---------RDKHIESTHEGGEGFEEEESAPDDEPGVLDYDHIKEERETIP-PYSHLQGPFLPSSSPVD-ALKRFLVWNLVGNIVSQNLGDHNVIEIEFADASRRPI--RFTDHYRFNMGSMAEEGAIFASATLDEINPDKGDKQVENKDEERSTVFFRPFANYSAKNQWLYTLPKKEGALCVAVGARWTAVATTRQWVRLFTFSGLQEGVLAMPGPVVTMVGQGELLAVFYHGGIPLINHSTGSASQSLHYQLLDIRRTVVVSQGPVCLSPDSLLIWAGFDNSDMLHIMDSEGLLSSLVRGFSWHWTPILESSRLHRNKMDSFWPVGVFNGSLMCSLLRGGEEHPPTNPKPLVSSLPFKPPFVMSNNDHALLKLEEVRFLSKTFLCQKLYQQEVLAFESLEDHDLEADILRNQASYDAHLVKMIQQAGAAENGERMLELAETLTLPKSLTLAVRIADHYSLPQVAARISDLVATRF 903
            LA++   T LA G     V+  +      FP   FE  + R T  +R +A + +    A    D  ++LI  V    +  L+ H G V  L FDP+ EY+ S+ + G V+ WEL +   + + K    +S  +L   +   +WSPDG +LA+PG R+  +L ++ T   + +   R  HT  I  LAW+P+G  LA++  D++++IW V +         +  + +   +E I           L W  +   LAV+DCMG +G+             ++VP  + + LL   +    E++G +   +   +  GE       P L R    +++ + K ++  +   FSL          R  H +ST  G EG                       R  +P   S +Q  F P ++PV    +RFL +N++G I +     ++ IEI+F D SR P     TDH+ F M S+ E G++FA       NP KG+K +       ST+ +RPF +++  ++W   L  +E  + VA+G  W A  T+  ++R+FT  GLQ  VL++ GPVVT  G  + LA+  H    L      S  Q L +++L++  +    +G + L+P S L W GF     L   DS+G+L      +   W P+  + +  +   +++W VG+    L C + +  + +P   PKP+++ L F  P  ++++D     LE    L+   L +   Q E +    L+   L+ +  + +   D  ++++I      +  ER  EL + L+L KS+  A++I     LP +A R + ++  R 
Sbjct:   70 LAMSPNATCLASGSVDHSVKLYK------FPSGDFETNITRFTLPIRALAFNKSGTLLAAAGDDEGIKLINTVDGTISKVLKAHKGPVTGLGFDPQSEYMASIDSTGTVIYWELQSGSILHTLKAVAPNSGLDLSV-LNVLSWSPDGRLLAVPGVRNDVVLYDKDTAEKLFTL--RGEHTQPICALAWSPNGKYLATSSLDKQVLIWDVDR---------KQDIGRHKFDERIT---------SLAWKPIDNVLAVIDCMGRYGVWEAVIPSSMKSPTEDVPNQSNNGLL---LFDEDEVEGQESSTSGSLSDLGEDTYEELKP-LSRKRLSKQSDALKELDEDDNDDFSLSPKVESHKKARRHHNKSTDNGNEGI----------------------RSRLPSARSKMQEAFQPGATPVQPGKRRFLCYNMLGAITTIEYEGYSHIEIDFHDTSRGPRVPSMTDHFGFTMASLNENGSVFA-------NPSKGEKNM-------STLMYRPFTSWANNSEWSMRLEGEEVKV-VALGTTWVAAVTSLNFIRIFTVGGLQTHVLSLDGPVVTASGFKDELAIVTHASDCL-----PSNEQVLEFRVLNMTNSSQPLRGRLPLTPGSSLTWFGFSEEGKLSSCDSKGVLRVFTSEYGGSWFPLFSACK-DKKPDENYWVVGLNARQLFCIVCKSPDLYPQVVPKPVLTLLNFSIP--LASSDLGAEALENAFILNNMHLIEIQKQIEEMDAAGLDTSSLDDEAFKLETGQDQCILRLIGSCCHGDKLERATELVKHLSLEKSVRGAIKIVTSLKLPNLAERFNSILEERL 822          
The following BLAST results are available for this feature:
BLAST of EWM28689.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111112|gb|EWM28689.1|0.000e+0100.00hmg-box dna-binding protein 1 [Nannochloropsis gad... [more]
gi|585111113|gb|EWM28690.1|0.000e+0100.00hmg-box dna-binding protein 1 [Nannochloropsis gad... [more]
gi|553194045|ref|XP_005855882.1|0.000e+099.67hypothetical protein NGA_2078120, partial [Nannoch... [more]
gi|553194042|ref|XP_005855881.1|8.364e-13399.48wd repeat and hmg-box dna-binding protein 1, parti... [more]
gi|356516884|ref|XP_003527122.1|3.535e-7828.01PREDICTED: WD repeat and HMG-box DNA-binding prote... [more]
gi|702496771|ref|XP_010037319.1|1.882e-7727.38PREDICTED: WD repeat and HMG-box DNA-binding prote... [more]
gi|645269581|ref|XP_008240062.1|9.636e-7728.21PREDICTED: WD repeat and HMG-box DNA-binding prote... [more]
gi|950943131|ref|XP_014493747.1|1.548e-7626.99PREDICTED: WD repeat and HMG-box DNA-binding prote... [more]
gi|965664117|dbj|BAT79826.1|5.796e-7626.65hypothetical protein VIGAN_02276600 [Vigna angular... [more]
gi|470130402|ref|XP_004301092.1|9.163e-7627.26PREDICTED: WD repeat and HMG-box DNA-binding prote... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1955rna1955Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications