EWM28824.1, cds1941 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28824.1 vs. NCBI_GenBank
Match: gi|585111247|gb|EWM28824.1| (hypothetical protein Naga_100002g73 [Nannochloropsis gaditana]) HSP 1 Score: 1763.81 bits (4567), Expect = 0.000e+0 Identity = 855/855 (100.00%), Postives = 855/855 (100.00%), Query Frame = 0 Query: 1 MEQLFKRYHNVSYTIPVLNVTITTSDITEYARIHSLNIGPIVALLFMGSIMTLVWFYLLVCVCCCLSRRGEASRGTSQVVPGAAYSSPTSPSSSASPLACKIELPSSSIERYDDEQRGNESKNMHRSRSLEEEHRKYSFKSLYIASIILSALLGLAVVSIVIYQSKIDASARILMGDVENLVLDSANALCTSDASSRFCTPQSAGDFVRTAETRASGMLTNLVDLLQSLGEELYPPLNGMIDDLDMAEADLEDIKVYISLIMGNRSRIQEYNDWLFATSPDDEVTPLTAALPKGKLPNVTAEQLTKLDDHQSVIIMTRNTSEDVFGKIQNFMQTDVPDAVTRFNTSAPPGTSTQLLMKPLQNVFEKLLRARSLMLRYYALVYEQGERIEDYLAPKTLAVSVIFLLPFVLQIVFTILNRSNQKCSGHLLTNMCCSYLCSVVFLLLAIIFSLLAVVSGTVCEYHLTLLAKVPVQNVTINDVQLSFTPAVIEDILNCPSYPTAPAGATSGNNFISLLGGEKIFDITSQTDEIIAQVEEARTSFTLNAQIQQSIYQLSILENFTALDFANSSEILSYRLEIDALLEDLPPATMDRDDEVQRASLTAYYLTNGSFSWDSYQESLEEINAILAEAAPIPDGFFSSYTFQTVWNFTQATVEADSAWMDVTFVRPKNYEALIAGLVQMDPFTGAVNTAAKTNIQVHANLSAIRYALRDIQSNIQEIDAAQSNLRTAQTQLDGMFSDLLDRLNGIARNLSLQEEGIRGLASFADSAPDYTKCGFVGNFYREGFQKNFCGNLHNNLSISWPFMLVAASLLFLSFITFSCFLRKPEWYRDPSYSQLEDRNNLTPGRTPRGSTLMIA 855 MEQLFKRYHNVSYTIPVLNVTITTSDITEYARIHSLNIGPIVALLFMGSIMTLVWFYLLVCVCCCLSRRGEASRGTSQVVPGAAYSSPTSPSSSASPLACKIELPSSSIERYDDEQRGNESKNMHRSRSLEEEHRKYSFKSLYIASIILSALLGLAVVSIVIYQSKIDASARILMGDVENLVLDSANALCTSDASSRFCTPQSAGDFVRTAETRASGMLTNLVDLLQSLGEELYPPLNGMIDDLDMAEADLEDIKVYISLIMGNRSRIQEYNDWLFATSPDDEVTPLTAALPKGKLPNVTAEQLTKLDDHQSVIIMTRNTSEDVFGKIQNFMQTDVPDAVTRFNTSAPPGTSTQLLMKPLQNVFEKLLRARSLMLRYYALVYEQGERIEDYLAPKTLAVSVIFLLPFVLQIVFTILNRSNQKCSGHLLTNMCCSYLCSVVFLLLAIIFSLLAVVSGTVCEYHLTLLAKVPVQNVTINDVQLSFTPAVIEDILNCPSYPTAPAGATSGNNFISLLGGEKIFDITSQTDEIIAQVEEARTSFTLNAQIQQSIYQLSILENFTALDFANSSEILSYRLEIDALLEDLPPATMDRDDEVQRASLTAYYLTNGSFSWDSYQESLEEINAILAEAAPIPDGFFSSYTFQTVWNFTQATVEADSAWMDVTFVRPKNYEALIAGLVQMDPFTGAVNTAAKTNIQVHANLSAIRYALRDIQSNIQEIDAAQSNLRTAQTQLDGMFSDLLDRLNGIARNLSLQEEGIRGLASFADSAPDYTKCGFVGNFYREGFQKNFCGNLHNNLSISWPFMLVAASLLFLSFITFSCFLRKPEWYRDPSYSQLEDRNNLTPGRTPRGSTLMIA Sbjct: 1 MEQLFKRYHNVSYTIPVLNVTITTSDITEYARIHSLNIGPIVALLFMGSIMTLVWFYLLVCVCCCLSRRGEASRGTSQVVPGAAYSSPTSPSSSASPLACKIELPSSSIERYDDEQRGNESKNMHRSRSLEEEHRKYSFKSLYIASIILSALLGLAVVSIVIYQSKIDASARILMGDVENLVLDSANALCTSDASSRFCTPQSAGDFVRTAETRASGMLTNLVDLLQSLGEELYPPLNGMIDDLDMAEADLEDIKVYISLIMGNRSRIQEYNDWLFATSPDDEVTPLTAALPKGKLPNVTAEQLTKLDDHQSVIIMTRNTSEDVFGKIQNFMQTDVPDAVTRFNTSAPPGTSTQLLMKPLQNVFEKLLRARSLMLRYYALVYEQGERIEDYLAPKTLAVSVIFLLPFVLQIVFTILNRSNQKCSGHLLTNMCCSYLCSVVFLLLAIIFSLLAVVSGTVCEYHLTLLAKVPVQNVTINDVQLSFTPAVIEDILNCPSYPTAPAGATSGNNFISLLGGEKIFDITSQTDEIIAQVEEARTSFTLNAQIQQSIYQLSILENFTALDFANSSEILSYRLEIDALLEDLPPATMDRDDEVQRASLTAYYLTNGSFSWDSYQESLEEINAILAEAAPIPDGFFSSYTFQTVWNFTQATVEADSAWMDVTFVRPKNYEALIAGLVQMDPFTGAVNTAAKTNIQVHANLSAIRYALRDIQSNIQEIDAAQSNLRTAQTQLDGMFSDLLDRLNGIARNLSLQEEGIRGLASFADSAPDYTKCGFVGNFYREGFQKNFCGNLHNNLSISWPFMLVAASLLFLSFITFSCFLRKPEWYRDPSYSQLEDRNNLTPGRTPRGSTLMIA 855
BLAST of EWM28824.1 vs. NCBI_GenBank
Match: gi|299470425|emb|CBN80186.1| (hypothetical protein Esi_0116_0070 [Ectocarpus siliculosus]) HSP 1 Score: 105.145 bits (261), Expect = 1.497e-19 Identity = 158/670 (23.58%), Postives = 271/670 (40.45%), Query Frame = 0 Query: 108 SIERYDDEQRGNESKNMHRSRSLEEEHRKYSFKSLYIASIILSALLGLAVVSIVIYQSK--IDASARILMGDVENLVLDSANALCTSDASSRFCTPQSAGDFVRTAETRASGMLTNLVDLLQSLGEELYPPL---------NGMIDDLDMAEADLEDIKVYISLIMGNRSRIQEYNDWLFATSPDDEVTPLTAALPKGKLPNVTAEQLTKLDDHQSVIIMTRNT-SEDVFGKIQNFMQTDVPDAVTRFNTSAPPGTSTQLLMKPLQNVFEKLLRARSLMLRYYAL----VYEQGERIEDYLAPKTLAVSVIFLLPFVLQIVFTILNRSNQKCSGHLLTNMCCSYLCSVVFLLLAIIFSLLAVVSGTVCEYHLTLL-AKVPVQNVTINDVQLSFTPAVIEDILNCPSYPTAPAGATSGNNFISLLGGEKIFDITSQTDEIIAQVEEARTSFTLN----AQIQQSIY----QLSILENFTALDFANSSEILSYRLEIDALLEDLPPATMDRDDEVQRASLTAYYLTNGS-FSWD-------SYQESLEEINAILAEAAP----IPDGFF---SSYTFQTVWNFTQATVEA-DSAWMDVT-------------FVRPKNYEALIAGLVQMDPFTGAVNTAAKTNIQVHANLSAIRYALRDIQSNIQEIDAAQS 723 +I + + G +M+ E+ K+ K L++ S I+ LG + Y D+S + + L+ + ALC + S+ C S GDF+ L +VD + SL P L G++D +MA ++ + ++ I+ + E D + D +V L + EQ T+L + S+ I + T +E +I+ + DV + T T +L LQ + R L + Y + + E E IE YL AV+ I LP V+ L CS +C + ++G +C++H+ L+ A +P N T+ DV++ +E IL C A T NNF+ +L ++IF+I+S ++EA + T N A+ + S+ +L L++F DF ++ EID LLED+PP+ +D DD + S+ ++YL N S +SW+ +Y+ LE +N +++ P + D F Y F+ N T TV A DS + + +++ L + T + T + N + +L I+Y + +I+ NI I Q+ Sbjct: 93 AIAEAEGDNDGKGLDDMYEIEDYEDNISKHR-KILWLFSFII--FLGYLFCAGYAYNGAETTDSSFGSIFDGTDVLLTRAQEALCAENGSAD-CADGSVGDFMLEISVALIDRLEGVVDFISSLSAVTAPLLVVSANLGTATGVVDTTEMAVININNSITSVNAIITGDGPVAELMDGETIANIDGDV------LHDIQDGRDALEQATELTESSSLEIAEQLTGNESAITRIK-YQLDDVHGNEILGDEDIRNATLTTVLDDVLQPM-------RDLTVDIYDVQNDDIPEVRENIEVYLDQAVQAVAGIIFLPGVI-----------------LFLTSLCSGVCQS------------SKINGDLCDHHMALIEANLPEFNTTVQDVEILVDFPKVEKILTCSG--DAGDTPTDSNNFVDILEIQQIFNISST-------LKEASSLITDNSALLAEPKDSVLDAQSELGPLDDFVETDFVGDIDMSELSDEIDDLLEDMPPSPLDWDDRDHQDSVDSFYLNNVSGYSWNNASSGNITYRGQLENVNWLISLMVPGIIGVEDAFLDIKDPYNFEQARNLTNETVCATDSPFYPADGQDRYSNSENIEIYAFDDHWDQLCRNVTAYYETTKKLETLIEENDEARQDLEGIQYEMGNIEGNITVITDQQA 706 The following BLAST results are available for this feature:
BLAST of EWM28824.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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