EWM28750.1, cds1923 (CDS) Nannochloropsis gaditana

Overview
NameEWM28750.1
Unique Namecds1923
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:486851..487234 -
Alignment locationCM002458.1:486547..486679 -
Alignment locationCM002458.1:485417..486453 -
Alignment locationCM002458.1:484430..485266 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28750.1
Productatp-dependent dna helicase pif1
Orig transcript idgnl|cribi|Naga_100002g91.4869.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:486851..487234 -
CM002458.1supercontigCM002458.1:486547..486679 -
CM002458.1supercontigCM002458.1:485417..486453 -
CM002458.1supercontigCM002458.1:484430..485266 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003678DNA helicase activity
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0016043cellular component organization
GO:0000723telomere maintenance
GO:0006281DNA repair
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR010285DNA_helicase_pif1-like
IPR003593AAA+_ATPase
Homology
BLAST of EWM28750.1 vs. NCBI_GenBank
Match: gi|585111173|gb|EWM28750.1| (atp-dependent dna helicase pif1 [Nannochloropsis gaditana])

HSP 1 Score: 1639.78 bits (4245), Expect = 0.000e+0
Identity = 796/796 (100.00%), Postives = 796/796 (100.00%), Query Frame = 0
Query:    1 MYTSRQFLHYTQRGHNWLARGQHSYFMPDAGIIDLCWDETQERPSQEEEERFSRVPGHHEPSTETISHAISSSSKVTRTLPKDALSQSSVHASGAASTSANDAKSVDLLKATGELSEEQKGILRSVMEGHNVYYSGRAGSGKTHLLRAIIDRAPAGKTFVTASTGIAAVNVGGTTLHSFAGIGLGDDPLEVLKERAGKNRTAAANWAAVEVLIVDEVSMLHGSLLSKLNEIAKHVKNQPHRPFGGVQLIFTGDFFQLPPVSRGRRAGDHDYAFLHPVWKELFGPESCYELTRVFRQAEKPLVALLNDVRYGRASAESIALLQELSRDLKPPPGIEPTLLFATNNRVDEMNQQKLGLLAGAEDHVFQATDSGVEPFLGQLRKNCLAESRLRLRTGAQVMLLKNVNANLGLVNGAKGRVTSFTNDEEHLPIVEFASGMQYSIAQEEWAIEVSERGRTVKKAVRLQVPLKLGWAITIHKSQGMGLEWLECKLDDVFEDGQAYVALSRAVKLEGLRVLTFRQDRFRVSPHVVSFYDSQIKGKTRREPGEESSWLSSLAPNWLPEHRKYRENPGGVVGSMTGRSSGRHEEHGAWTGKREGPYSSWNSGSVTNSLKRNRVGGGGEWIPRGGGRNVLPPPSPPPPATSPPAPSPLGPANGSALPGRKQTVPPYRPFSAPLAPSAGPYRSQKYQHQQHEQRRQQLLPGGQHLPRTTFRTASDGARLVSSVNNDTDAENGSDRQDAYGSKGNSSKTNMATSKTGASYVNNRGGAWGSYEQRRNVPAYTSRPSGQGSVRNYFSTKK 796
            MYTSRQFLHYTQRGHNWLARGQHSYFMPDAGIIDLCWDETQERPSQEEEERFSRVPGHHEPSTETISHAISSSSKVTRTLPKDALSQSSVHASGAASTSANDAKSVDLLKATGELSEEQKGILRSVMEGHNVYYSGRAGSGKTHLLRAIIDRAPAGKTFVTASTGIAAVNVGGTTLHSFAGIGLGDDPLEVLKERAGKNRTAAANWAAVEVLIVDEVSMLHGSLLSKLNEIAKHVKNQPHRPFGGVQLIFTGDFFQLPPVSRGRRAGDHDYAFLHPVWKELFGPESCYELTRVFRQAEKPLVALLNDVRYGRASAESIALLQELSRDLKPPPGIEPTLLFATNNRVDEMNQQKLGLLAGAEDHVFQATDSGVEPFLGQLRKNCLAESRLRLRTGAQVMLLKNVNANLGLVNGAKGRVTSFTNDEEHLPIVEFASGMQYSIAQEEWAIEVSERGRTVKKAVRLQVPLKLGWAITIHKSQGMGLEWLECKLDDVFEDGQAYVALSRAVKLEGLRVLTFRQDRFRVSPHVVSFYDSQIKGKTRREPGEESSWLSSLAPNWLPEHRKYRENPGGVVGSMTGRSSGRHEEHGAWTGKREGPYSSWNSGSVTNSLKRNRVGGGGEWIPRGGGRNVLPPPSPPPPATSPPAPSPLGPANGSALPGRKQTVPPYRPFSAPLAPSAGPYRSQKYQHQQHEQRRQQLLPGGQHLPRTTFRTASDGARLVSSVNNDTDAENGSDRQDAYGSKGNSSKTNMATSKTGASYVNNRGGAWGSYEQRRNVPAYTSRPSGQGSVRNYFSTKK
Sbjct:    1 MYTSRQFLHYTQRGHNWLARGQHSYFMPDAGIIDLCWDETQERPSQEEEERFSRVPGHHEPSTETISHAISSSSKVTRTLPKDALSQSSVHASGAASTSANDAKSVDLLKATGELSEEQKGILRSVMEGHNVYYSGRAGSGKTHLLRAIIDRAPAGKTFVTASTGIAAVNVGGTTLHSFAGIGLGDDPLEVLKERAGKNRTAAANWAAVEVLIVDEVSMLHGSLLSKLNEIAKHVKNQPHRPFGGVQLIFTGDFFQLPPVSRGRRAGDHDYAFLHPVWKELFGPESCYELTRVFRQAEKPLVALLNDVRYGRASAESIALLQELSRDLKPPPGIEPTLLFATNNRVDEMNQQKLGLLAGAEDHVFQATDSGVEPFLGQLRKNCLAESRLRLRTGAQVMLLKNVNANLGLVNGAKGRVTSFTNDEEHLPIVEFASGMQYSIAQEEWAIEVSERGRTVKKAVRLQVPLKLGWAITIHKSQGMGLEWLECKLDDVFEDGQAYVALSRAVKLEGLRVLTFRQDRFRVSPHVVSFYDSQIKGKTRREPGEESSWLSSLAPNWLPEHRKYRENPGGVVGSMTGRSSGRHEEHGAWTGKREGPYSSWNSGSVTNSLKRNRVGGGGEWIPRGGGRNVLPPPSPPPPATSPPAPSPLGPANGSALPGRKQTVPPYRPFSAPLAPSAGPYRSQKYQHQQHEQRRQQLLPGGQHLPRTTFRTASDGARLVSSVNNDTDAENGSDRQDAYGSKGNSSKTNMATSKTGASYVNNRGGAWGSYEQRRNVPAYTSRPSGQGSVRNYFSTKK 796          
BLAST of EWM28750.1 vs. NCBI_GenBank
Match: gi|1191037158|ref|XP_020895815.1| (uncharacterized protein LOC110234765 [Exaiptasia pallida])

HSP 1 Score: 350.517 bits (898), Expect = 1.882e-103
Identity = 194/425 (45.65%), Postives = 271/425 (63.76%), Query Frame = 0
Query:  114 ELSEEQKGILRSVMEGHNVYYSGRAGSGKTHLLRAIIDRAPAGKTFVTASTGIAAVNVGGTTLHSFAGIGLGDDPLEVLKERAGKNRTAAANWAAVEVLIVDEVSMLHGSLLSKLNEIAKHVKNQPHRPFGGVQLIFTGDFFQLPPVSRGRRAGDH--DYAFLHPVWKELFGPESCYELTRVFRQAEKPLVALLNDVRYGRASAESIALLQELSRDLKPPPGIEPTLLFATNNRVDEMNQQKLGLLAGAEDHVFQATDSGVEPFLGQLRKNCLAESRLRLRTGAQVMLLKNVNANLGLVNGAKGRVTSFTNDEEHLPIVEFASGMQYSIAQEEWAIEVSERGRTVKKAVRLQVPLKLGWAITIHKSQGMGLEWLECKLDDVFEDGQAYVALSRAVKLEGLRVLTFRQDRFRVSPHVVSFYDSQIK 536
            ELS +Q+ +L  + +G NV+Y+G AG+GKT LL+ I   AP G T+VTA TG+AAV  GG+TLHSFAGIGLG+   E L     +  +   NW   +VLI+DE+SML G L  KL  IA +++N    PFGG+QL+  GDFFQLPP+   ++ G+   +Y F    W +    E   ELT+++RQ++  LV LL +VRY   S ES+ LL+ L R + P   IEPT L++ N RV+++N  KL  L   E+  + A D G  P++  + K  +A  +L L+ GAQVML+KN+   L  +NG++G V  F ND    P+V+F  G   +I + EW +E S  G+ +  AVR QVPLKL WAITIHKSQGM +++L+  L +VF  GQAYVALSRA  +EGL+VL+F  ++F  S  V+ FY+ ++K
Sbjct:   71 ELSYQQEYVLNLIRDGKNVFYTGNAGTGKTTLLKEIRKCAPDG-TYVTALTGVAAVQAGGSTLHSFAGIGLGNGTKESLCNIVRRG-SKVQNWRKAKVLIIDELSMLDGRLFDKLEYIACNIRN-CDLPFGGLQLVVCGDFFQLPPI---QKVGETCVNYCFQSKSWDKCI--EHNLELTQIYRQSDPRLVKLLYEVRYKCLSDESLELLKFLKRPI-PNTDIEPTKLYSHNARVNDINNAKLKSLPDQEEMTYMAEDHGQAPYVDNMSKYVIAMDKLVLKIGAQVMLIKNLTEEL--INGSRGVVEGFDND--GWPLVKFVDGQLKTIKEMEWNLENSS-GKVL--AVRTQVPLKLAWAITIHKSQGMSIDFLQVDLKNVFSQGQAYVALSRARTIEGLQVLSFDVNKFTTSDAVIKFYEDKVK 479          
BLAST of EWM28750.1 vs. NCBI_GenBank
Match: gi|1032150935|gb|OAO14610.1| (DNA helicase PIF1 [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 340.117 bits (871), Expect = 2.284e-103
Identity = 181/431 (42.00%), Postives = 262/431 (60.79%), Query Frame = 0
Query:  111 ATGELSEEQKGILRSVMEGHNVYYSGRAGSGKTHLLRAIID----RAPAGKTFVTASTGIAAVNVGGTTLHSFAGIGLGDDPLEVLKERAGKNRTAAANWAAVEVLIVDEVSMLHGSLLSKLNEIAKHVKNQPHRPFGGVQLIFTGDFFQLPPVSRGRRAGDHDYAFLHPVWKELFGPESCYELTRVFRQAEKPLVALLNDVRYGRASAESIALLQELSRDLKPPPGIEPTLLFATNNRVDEMNQQKLGLLAGAEDHVFQATDSGVEPFLGQLRKNCLAESRLRLRTGAQVMLLKNVNANLGLVNGAKGRVTSFTND---EEHLPIVEFASG---MQYSIAQEEWAIEVSERGRTVKKAVRLQVPLKLGWAITIHKSQGMGLEWLECKLDDVFEDGQAYVALSRAVKLEGLRVLTFRQDRFRVSPHVVSFY 531
            A   LSE+Q+ +  + +EG++++++G AG+GK+++LR I+     +  A + FVTASTGIAA N+GGTTLHSFA IGLGD+ +     R  +N+ A   W    VLI+DE+SML G    KL  +++ ++      FGG+Q+I  GDFFQLPPV  G+      Y F    W  +   +    +T+VFRQ ++   ALL D+RYG+ S  S  LLQ L R+      I PT LFA N  VD+ N   L  L       ++A D G + +L QL+KNC A + L L+ GAQVMLLKN++  +GLVNG++G V SF  D   E+ +P+V FA+G   + + + ++E+ IE+ E+      A R+Q+PLKL W I+IHKSQGM ++ L+  L  VFE G  YVALSR V ++ +++  F     R +P V++FY
Sbjct:   30 ALSSLSEDQRKVYTAAVEGYSIFFTGDAGTGKSYVLRLIVSALKKKYGANRVFVTASTGIAACNIGGTTLHSFASIGLGDESITKCVHRVLQNKKAKKRWQDCVVLIIDEISMLDGCFFDKLEAVSRRIRGD-ESCFGGIQIIACGDFFQLPPVGLGK--NKVIYCFESECWNTVI--QRTLIMTKVFRQKDEEFQALLRDIRYGKVSQRSRTLLQRLERNELNTGKIVPTKLFALNESVDQYNTSALAQLPDTHCITYKAIDEGQDVYLKQLQKNCQAPAVLPLKVGAQVMLLKNLSVEMGLVNGSRGVVDSFMKDKESEQEIPVVRFATGSGEVLHPMERKEFTIELGEK----VVARRVQLPLKLAWGISIHKSQGMTIDLLDVDLHGVFEVGMTYVALSRGVSIDRMKLRNFSMRGIRTNPKVIAFY 451          
BLAST of EWM28750.1 vs. NCBI_GenBank
Match: gi|918999956|ref|XP_013401768.1| (PREDICTED: ATP-dependent DNA helicase PIF1-like [Lingula anatina])

HSP 1 Score: 327.791 bits (839), Expect = 1.770e-98
Identity = 183/419 (43.68%), Postives = 256/419 (61.10%), Query Frame = 0
Query:  114 ELSEEQKGILRSVMEGHNVYYSGRAGSGKTHLLRAIIDRAPAGKTFVTASTGIAAVNVGGTTLHSFAGIGLGDDPLEVLKERAGKNR-TAAANWAAVEVLIVDEVSMLHGSLLSKLNEIAKHVKNQPHRPFGGVQLIFTGDFFQLPPVSRGRRAGDHDYAFLHPVWKELFGPESCYELTRVFRQAEKPLVALLNDVRYGRASAESIALLQELSRDLKPPPGIEPTLLFATNNRVDEMNQQKLGLLAGAEDHVFQATDSGVEPFLGQLRKNCLAESRLRLRTGAQVMLLKNVNANLGLVNGAKGRVTSFTNDEEHLPIVEFASGMQYSIAQEEWAIEVSERGRTVKKAVRLQVPLKLGWAITIHKSQGMGLEWLECKLDDVFEDGQAYVALSRAVKLEGLRVLTFRQDRFRVSPHVVSFY 531
            +L+ +Q  +LR+V+ G +++++G AG+GK++LLR II   P   T+ TASTG+AA ++GGTTLHSFAGIG G  P+E   E A  NR   A  W     LI+DEVSM+ G   SKL  +A+ V  + + PFGG+QLI  GDF QLPPV++G+     ++ F    W +        EL +V RQ++K  V +L +VR GR        L   S+ +    GI+ T L      V  +NQ  L  L G E + +Q++DS  +   G L   C   +RL L+ GAQVMLLKN++A  GLVNGA+G VT F N+ + LP+V+F  G++ ++  E W ++ S      ++    Q+PL+L WAI+IHKSQGM L+ +E  L  VFE GQAYVALSRA  L+GLRVL F +D  R +P V++FY
Sbjct:  198 KLTADQTKVLRTVLGGRSIFFTGSAGTGKSYLLRRIIGALPPHHTYATASTGLAACHIGGTTLHSFAGIGSGKAPIEQCVELA--NRPVIAKQWRQCNHLIIDEVSMVDGEFFSKLETVAR-VMKKSNEPFGGIQLILCGDFLQLPPVTKGQE--KKNFCFQSRAWHKCISVN--MELRQVMRQSDKKFVEILQEVRQGRCPEFVEKTLHATSKHVLDKDGIQATRLCTHKEDVGHINQMHLDRLKG-EVYAYQSSDSD-QASQGLLNTLCPVGARLELKMGAQVMLLKNLDAQRGLVNGARGVVTGFNNEHQGLPVVKFIGGVETTVRFERWTVKASGGMHLTRR----QLPLQLAWAISIHKSQGMTLDCVEMSLSRVFESGQAYVALSRAKSLQGLRVLDFEKDCVRANPEVLTFY 603          
BLAST of EWM28750.1 vs. NCBI_GenBank
Match: gi|913317657|ref|XP_013189823.1| (PREDICTED: ATP-dependent DNA helicase PIF1 [Amyelois transitella])

HSP 1 Score: 323.168 bits (827), Expect = 1.705e-96
Identity = 184/424 (43.40%), Postives = 250/424 (58.96%), Query Frame = 0
Query:  109 LKATGELSEEQKGILRSVMEGHNVYYSGRAGSGKTHLLRAIIDRAPAGKTFVTASTGIAAVNVGGTTLHSFAGIGLGDDPLEVLKERAGKNRTAAANWAAVEVLIVDEVSMLHGSLLSKLNEIAKHVKNQPHRPFGGVQLIFTGDFFQLPP-VSRGRRAGDHDYAFLHPVWKELFGPESCYELTRVFRQAEKPLVALLNDVRYGRASAESIALLQELSRDLKPPPGIEPTLLFATNNRVDEMNQQKLGLLAGAEDHVFQATDSGVEPFLGQLRKNCLAESRLRLRTGAQVMLLKNVNANLGLVNGAKGRVTSFTNDEEHLPIVEFASGMQYSIAQEEWAIEVSERGRTVKKAVRLQVPLKLGWAITIHKSQGMGLEWLECKLDDVFEDGQAYVALSRAVKLEGLRVLTFRQDRFRVSPHVVSFY 531
            L  T  L+ EQ+ +L + + G NV+++G AG+GK++LL+ I+   P   T  TASTG+AA ++GGTTLH+FAGIG G   L+VL+ERA K    A  W   + LI+DE+SM+ G+   KL  +A+HV+    +PFGG+QLI  GDF QLPP V +G+   +  + F    W+     + C+EL  V RQ +K  +++LN +R GR + E    L   +R      GI  T L +  N    +N  KL  L G E+ VF + DS  E     L    +A S+L L+ GAQVMLLKN+N N GLVNGA+G V  F   EE LP+V F +  +Y+   E W ++ S  G  +    R QVPL L WA +IHKSQG+ L+ +E  L  +FE GQAYVALSRA  LE LRVL F       +P V+ FY
Sbjct:  189 LTNTNSLNPEQQRVLEACVSGKNVFFTGSAGTGKSYLLKRIVAALPPDVTMPTASTGVAACHIGGTTLHAFAGIGDGSGSLDVLRERATKLTMVAQKWRKCKHLIIDEISMVDGTFFEKLEAVARHVRKN-EKPFGGIQLILCGDFLQLPPVVDKGK--SEKRFCFQTQCWERCI--DLCFELKEVHRQTDKEFISILNSIRIGRVTKEISEKLIGTARQKIESDGILATRLCSHTNDSKLINDSKLENLKG-EEKVFSSQDS--ENSTKLLDMQTIAPSKLVLKVGAQVMLLKNINVNAGLVNGARGVVVRF---EEGLPVVRFKNKKEYTARAERWFVKNSN-GSLI---CRRQVPLNLAWAFSIHKSQGLTLDCVEMSLSKIFEAGQAYVALSRAQSLETLRVLDFDSRHVWANPSVLEFY 597          
BLAST of EWM28750.1 vs. NCBI_GenBank
Match: gi|1173911443|gb|OQR75204.1| (ATP-dependent DNA helicase PIF1-like [Tropilaelaps mercedesae])

HSP 1 Score: 322.013 bits (824), Expect = 1.911e-96
Identity = 182/419 (43.44%), Postives = 255/419 (60.86%), Query Frame = 0
Query:  115 LSEEQKGILRSVMEGHNVYYSGRAGSGKTHLLRAIIDRAPAGKTFVTASTGIAAVNVGGTTLHSFAGIGLGDDPLEVLKERAGKNRTAAANWAAVEVLIVDEVSMLHGSLLSKLNEIAKHVKNQPHRPFGGVQLIFTGDFFQLPPVSRGRRAGDHDYAFLHPVWKELFGPESCYELTRVFRQAEKPLVALLNDVRYGRASAESIALLQELSRDLKPPPGIEPTLLFATNNRVDEMNQQKLGLLAGAEDHVFQATDS--GVEPFLGQLRKNCLAESRLRLRTGAQVMLLKNVNANLGLVNGAKGRVTSFTNDEEHLPIVEFASGMQYSIAQEEWAIEVSERGRTVKKAVRLQVPLKLGWAITIHKSQGMGLEWLECKLDDVFEDGQAYVALSRAVKLEGLRVLTFRQDRFRVSPHVVSFY 531
            LS+EQ+ +L SV  G +V+++G AG+GKT LL+ I+   P   TFVTA+TGIAA ++GG+T+H+FAGIGLG+  +  L E+  K+  A ANW   + LI+DE+S+L G+   KL  +A+ V N   +PFGG+Q+I +GDF QLPPVS   + G   + F    W E+ G    YEL  V RQ +   V++L ++R+GR S  S  +L +   +     GI  T L   N  VD +NQ+    L+G E  +F+ATDS  G++ FL     +   +S +RL+ G QVML+KN     GL NG++G V  F  D+  LPIV+F  G+  ++  E+W I    +G       R Q+PLKL WA++IHKSQG+ L+ +E  L  VFE GQAYVALSRA  L+GL+VL F     R  P V+ FY
Sbjct:  195 LSKEQREVLASVKTGTSVFFTGSAGTGKTFLLKRIVTILPPNSTFVTATTGIAATHIGGSTVHAFAGIGLGEASVSCLAEKVRKS-AAMANWRRCQHLIIDEISLLDGAYFEKLEAVARSVLNS-DKPFGGIQVILSGDFLQLPPVS---KTGQKKFVFQTKCWDEVIG--RIYELKEVHRQKDHQFVSILQEIRWGRCSDTSSKVLTDTVLNTVDGDGILATKLSTHNIDVDAVNQEFFRRLSG-EVKIFKATDSVEGMKVFLDN---HLPVQSVIRLKVGTQVMLVKNTKVAQGLANGSRGVVVGF--DKSGLPIVKFKKGLTTAVGPEKWTI----KGAGGASFSRNQIPLKLAWAMSIHKSQGLTLDAVEISLAKVFECGQAYVALSRASTLQGLKVLDFSASAVRADPRVIEFY 596          
BLAST of EWM28750.1 vs. NCBI_GenBank
Match: gi|950886641|ref|XP_014526173.1| (hypothetical protein JH06_3663 [Blastocystis sp. subtype 4] >gi|902860784|gb|KNB42730.1| hypothetical protein JH06_3663 [Blastocystis sp. subtype 4])

HSP 1 Score: 322.013 bits (824), Expect = 2.979e-96
Identity = 184/456 (40.35%), Postives = 269/456 (58.99%), Query Frame = 0
Query:   86 SQSSVHASGAASTSANDAKSVDLLKATGELSEEQKGILRSVMEGHNVYYSGRAGSGKTHLLRAII----DRAPAGKTFVTASTGIAAVNVGGTTLHSFAGIGLGDDPLEVLKERAGKNRTAAANWAAVEVLIVDEVSMLHGSLLSKLNEIAKHVKNQPHRPFGGVQLIFTGDFFQLPPVSRGRRAGDHDYAFLHPVWKELFGPESCYELTRVFRQAEKPLVALLNDVRYGRASAESIALLQELSRDLKPPPGIEPTLLFATNNRVDEMNQQKLGLLAGAEDHVFQATDSGVEPFLGQLRKNCLAESRLRLRTGAQVMLLKNVNANLGLVNGAKGRVTSFTNDEE---HLPIVEFASG---MQYSIAQEEWAIEVSERGRTVKKAVRLQVPLKLGWAITIHKSQGMGLEWLECKLDDVFEDGQAYVALSRAVKLEGLRVLTFRQDRFRVSPHVVSFY 531
            S+S V  +     S N+ ++V   +A   LS+EQ+ +  S +EG+N++++G AG+GK+++LR I+    ++  A   +VTASTGIAA N+ GTTLHSFAGIG+GD+ +     R  +N+ A   W   EVLI+DE+SML G L  KL  IA+ V+      FGG+Q+I  GDFFQLPPV  G+   +  Y F    W  +   +    + +VFRQ +  L ALL D+RYG  S  SI ++  +SR+      + PT LFA N  VDE N+  L  +  ++   ++A D G   +L QL+K+C A + L L+ GAQVMLLKN++ + GLVNG++G V S+T D E    +P+V F +    +  ++  +E+ +E+  R      A R+Q+PLKL W I+IHKSQGM ++ L+  L  VFE G  YVALSR V L  + +  F       +  V+ FY
Sbjct:   41 SRSGVEDADITKKSINE-ETVSNSEAIAALSDEQREVYMSALEGYNLFFTGDAGTGKSYVLRLIVSALKEKYGANNIYVTASTGIAACNISGTTLHSFAGIGVGDETVTKCVRRILQNKKAKQRWQTCEVLIIDEISMLDGRLFEKLEAIARRVRG-SDLCFGGIQVIVCGDFFQLPPVGLGQ--NNVVYCFESECWNAVI--QKTIIMKKVFRQKDAQLQALLRDIRYGHVSQSSIQMISRMSRNDLTHNAVMPTKLFAYNKSVDEYNESALNHIQ-SDSIEYKAVDDGDSNYLIQLQKSCQAPAVLSLKPGAQVMLLKNLSVSEGLVNGSRGVVDSYTKDPESGQMIPVVRFLTSTGDILRTVTHKEFTMELGSR----VVARRIQLPLKLAWGISIHKSQGMTIDLLDVDLRGVFEAGMTYVALSRGVALNRMCLRNFSIRGVITNKKVIRFY 485          
BLAST of EWM28750.1 vs. NCBI_GenBank
Match: gi|307191979|gb|EFN75369.1| (ATP-dependent DNA helicase PIF1 [Harpegnathos saltator])

HSP 1 Score: 318.161 bits (814), Expect = 3.005e-96
Identity = 180/426 (42.25%), Postives = 252/426 (59.15%), Query Frame = 0
Query:  112 TGELSEEQKGILRSVMEGHNVYYSGRAGSGKTHLLRAIIDRAPAGKTFVTASTGIAAVNVGGTTLHSFAGIGLGDDPLEVLKERAGKNRTAAANWAAVEVLIVDEVSMLHGSLLSKLNEIAKHVKNQPHRPFGGVQLIFTGDFFQLPPVSRGRRAGDHDYAFLHPVWKELFGPESC----YELTRVFRQAEKPLVALLNDVRYGRASAESIALLQELSRDLKPPPGIEPTLLFATNNRVDEMNQQKLGLLAGAEDHVFQATDSGVEPFLGQLRKNCLAE--SRLRLRTGAQVMLLKNVNANLGLVNGAKGRVTSFTNDEEHLPIVEFASGMQYSIAQEEWAIEVSERGRTVKKAVRLQVPLKLGWAITIHKSQGMGLEWLECKLDDVFEDGQAYVALSRAVKLEGLRVLTFRQDRFRVSPHVVSFY 531
             GEL+EEQ  IL +V+ G NV+++G AG+GK+ LLR II   P   T  TASTG+AA ++GG TLH FAGIGLG   +    + A +  ++A  W   + L++DE+SM+ G    K+  +A++V+ +  RPFGG+QLI  GDFFQLPPVS+     +  + F    W      E C    YEL  V RQ ++  V +LN++R GR + + +  L+E ++      G+  T L +     DE+N+ +L  L G E  V+ A DS  +  +  +    LA   S+L L+ GAQVMLLKNV+   GLVNGA+G VT F ND   +P+V+F SG QY    E+W+I+ S      +K    QVPLKL WA +IHKSQG+ L+ +E  L  VF  GQ+YVALSRA  L+ LR+L F   +   +  V+ FY
Sbjct:   65 VGELTEEQNMILNAVLNGRNVFFTGSAGTGKSFLLRKIISALPPDVTIATASTGVAACHIGGITLHQFAGIGLGTGTMNRCLQLASRAASSAV-WRKTKHLVIDEISMVDGDFFDKIEAVARYVR-KTERPFGGIQLILCGDFFQLPPVSKNN--DEAKFCFQSEAW------EKCVHFNYELQTVHRQKDEAFVRILNNIRIGRVTDDIVDTLKETAKQKIESNGVLATRLCSHVKEADEINEFQLSELKG-ETKVYTALDS--DNSMAHVLDQQLASIPSKLILKVGAQVMLLKNVSVTSGLVNGARGVVTDFKND---IPVVQFRSGAQYDAKMEKWSIKASSGALVHRK----QVPLKLAWAFSIHKSQGLTLDCVEMCLSRVFNAGQSYVALSRAQSLQSLRILDFNSHQVWANTAVLEFY 470          
BLAST of EWM28750.1 vs. NCBI_GenBank
Match: gi|746858842|ref|XP_011060194.1| (PREDICTED: ATP-dependent DNA helicase PIF1 isoform X2 [Acromyrmex echinatior])

HSP 1 Score: 318.161 bits (814), Expect = 3.583e-96
Identity = 175/420 (41.67%), Postives = 249/420 (59.29%), Query Frame = 0
Query:  112 TGELSEEQKGILRSVMEGHNVYYSGRAGSGKTHLLRAIIDRAPAGKTFVTASTGIAAVNVGGTTLHSFAGIGLGDDPLEVLKERAGKNRTAAANWAAVEVLIVDEVSMLHGSLLSKLNEIAKHVKNQPHRPFGGVQLIFTGDFFQLPPVSRGRRAGDHDYAFLHPVWKELFGPESCYELTRVFRQAEKPLVALLNDVRYGRASAESIALLQELSRDLKPPPGIEPTLLFATNNRVDEMNQQKLGLLAGAEDHVFQATDSGVEPFLGQLRKNCLAESRLRLRTGAQVMLLKNVNANLGLVNGAKGRVTSFTNDEEHLPIVEFASGMQYSIAQEEWAIEVSERGRTVKKAVRLQVPLKLGWAITIHKSQGMGLEWLECKLDDVFEDGQAYVALSRAVKLEGLRVLTFRQDRFRVSPHVVSFY 531
            TGEL+EEQ  +L +V+ G NV+++G AG+GK+ LL+ II   P   T  TASTG+AA ++GG TLH FAGIG+G    E   + A +   +A+ W   + L++DE+SM+ G    K+ E+A+HV+ +  RPFGG+QLI  GDFFQLPPVS+        + F    W++       +EL  V RQ ++  V +LN +R GR + + + +L+E ++      GI  T L +     DE+N+ +L  L G E  V+ A DS        L +     S+L L+ GAQVML+KN+N N GLVNGA+G V  F ND   +PI++  SG  Y    E+WAI+ +      +K    Q+PLKL WA +IHKSQG+ L+ +E  L  VF+ GQ+YVALSRA  L+ LRVL F   +   +  V+ FY
Sbjct:   77 TGELTEEQAQVLNAVLSGKNVFFTGSAGTGKSFLLKKIISALPPDVTMATASTGVAACHIGGITLHKFAGIGMGTGTKERCIQLASRP-ASASTWRKTKYLVIDEISMVDGDFFDKIEEVARHVR-RTERPFGGIQLILCGDFFQLPPVSKTNDKA--KFCFQSEAWQKCVHLN--FELRIVHRQKDEAFVKILNSIRIGRVTDDIVDILKETAKQKIESNGILATRLCSHVKEADEINEFQLNELKG-ESKVYTALDSDSSA-TSMLDQQLPIPSKLILKVGAQVMLMKNINVNSGLVNGARGVVIDFKND---IPIIKLRSGTHYEAKMEKWAIKTNSGAVLHRK----QIPLKLAWAFSIHKSQGLTLDCVEMCLSRVFDAGQSYVALSRAQSLQSLRVLDFNSQQVWANTTVLEFY 481          
BLAST of EWM28750.1 vs. NCBI_GenBank
Match: gi|828212973|ref|XP_012559164.1| (PREDICTED: ATP-dependent DNA helicase PIF1-like [Hydra vulgaris])

HSP 1 Score: 322.013 bits (824), Expect = 5.174e-96
Identity = 182/469 (38.81%), Postives = 274/469 (58.42%), Query Frame = 0
Query:   80 LPKDALSQSSVHASGAASTSANDAKSVDLLKATGELSEEQKGILRSVMEGHNVYYSGRAGSGKTHLLRAIIDRAPAGKTFVTASTGIAAVNVGGTTLHSFAGIGLGDDPLEVLKERAGKNRTAAANWAAVEVLIVDEVSMLHGSLLSKLNEIAKHVKNQPHRPFGGVQLIFTGDFFQLPPVSRGRRAGDHDYAFLHPVWKELFGPESCYELTRVFRQAEKPLVALLNDVRYGRASAESIALLQELSRDLKPPPGIEPTLLFATNNRVDEMNQQKLGLLAGAEDHVFQATDSGVEPFLGQLRKNCLAESRLRLRTGAQVMLLKNVNANLGLVNGAKGRVTSFTNDEEHLPIVEFASGMQYSIAQEEWAIEVSERGRTVKKAVRLQVPLKLGWAITIHKSQGMGLEWLECKLDDVFEDGQAYVALSRAVKLEGLRVLTFRQDRFRVSPHVVSFYDSQIKGKTRREPGEESS 548
            +PK  +    +H+S        D K+V   K    L++EQ+ ++R+V +G NV+++G AG+GK++LL+ II   P   T  +ASTG+AA  +GG TLHSFAGIG GD  LE   E A +  +   NW   + L++DEVSM+    L K+ ++A+ V+N    PFGG+QLI  GDF QLPPV + ++  ++++ F    WK++   +   ELT V RQ ++  + LL  +R G+   E    L     +     GI+ T L    N  +E+N  K+  L   E  V+ ++DS  E    Q+ K  L ++++ L+ G+QVML KN++ + GLVNGA+G V  F++D++ LP+V FA G++  I +E++  +       V+   R+Q+PL+L WAI+IHKSQG+ L+  E  LD VFE+GQAYVALSRA  L+ LRVL   ++  R    V+ FY      K RR+    SS
Sbjct:  193 IPKKVICPDLIHSS--------DDKAV---KFNCLLTKEQEEVIRAVKQGFNVFFTGSAGTGKSYLLKRIIGALPPDTTVASASTGVAACQIGGVTLHSFAGIGSGDGSLEKCIELASRP-SVIRNWKRCKALLIDEVSMIDAEFLDKIEQVARAVRN-SELPFGGIQLIMCGDFLQLPPVKKKKQIQNYEFCFQAKCWKDII--QVSMELTEVKRQKDEDFINLLRYIRVGKCPEEVYNKLISTQNNEIEVAGIQATRLCTHKNIAEEINATKMNELK-TESRVYISSDSNSEHS-EQMNKQLLVQNKIELKVGSQVMLTKNLDVSRGLVNGARGVVVKFSSDKDGLPMVRFAKGIELVIKREKFVCKT-----LVETVSRVQLPLQLAWAISIHKSQGLTLDCCEVSLDRVFENGQAYVALSRAKSLQSLRVLDMTRNCVRAHKDVLKFY-----IKLRRDISLASS 634          
The following BLAST results are available for this feature:
BLAST of EWM28750.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111173|gb|EWM28750.1|0.000e+0100.00atp-dependent dna helicase pif1 [Nannochloropsis g... [more]
gi|1191037158|ref|XP_020895815.1|1.882e-10345.65uncharacterized protein LOC110234765 [Exaiptasia p... [more]
gi|1032150935|gb|OAO14610.1|2.284e-10342.00DNA helicase PIF1 [Blastocystis sp. ATCC 50177/Nan... [more]
gi|918999956|ref|XP_013401768.1|1.770e-9843.68PREDICTED: ATP-dependent DNA helicase PIF1-like [L... [more]
gi|913317657|ref|XP_013189823.1|1.705e-9643.40PREDICTED: ATP-dependent DNA helicase PIF1 [Amyelo... [more]
gi|1173911443|gb|OQR75204.1|1.911e-9643.44ATP-dependent DNA helicase PIF1-like [Tropilaelaps... [more]
gi|950886641|ref|XP_014526173.1|2.979e-9640.35hypothetical protein JH06_3663 [Blastocystis sp. s... [more]
gi|307191979|gb|EFN75369.1|3.005e-9642.25ATP-dependent DNA helicase PIF1 [Harpegnathos salt... [more]
gi|746858842|ref|XP_011060194.1|3.583e-9641.67PREDICTED: ATP-dependent DNA helicase PIF1 isoform... [more]
gi|828212973|ref|XP_012559164.1|5.174e-9638.81PREDICTED: ATP-dependent DNA helicase PIF1-like [H... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1928rna1928Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications