EWM28754.1, cds1884 (CDS) Nannochloropsis gaditana

Overview
NameEWM28754.1
Unique Namecds1884
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:398529..399886 +
Alignment locationCM002458.1:400080..400668 +
Alignment locationCM002458.1:400905..400998 +
Alignment locationCM002458.1:401103..401184 +
Alignment locationCM002458.1:401424..402561 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28754.1
Productg-protein beta subunit 1
Orig transcript idgnl|cribi|Naga_100002g133.4873.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:398529..399886 +
CM002458.1supercontigCM002458.1:400080..400668 +
CM002458.1supercontigCM002458.1:400905..400998 +
CM002458.1supercontigCM002458.1:401103..401184 +
CM002458.1supercontigCM002458.1:401424..402561 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0007165signal transduction
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003913DNA photolyase activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR016346Guanine_nucleotide-bd_bsu
IPR015943WD40/YVTN_repeat-like_dom
IPR006050DNA_photolyase_N
IPR014729Rossmann-like_a/b/a_fold
IPR005101Photolyase_FAD-bd/Cryptochr_C
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
IPR001632Gprotein_B
Homology
BLAST of EWM28754.1 vs. NCBI_GenBank
Match: gi|585111177|gb|EWM28754.1| (g-protein beta subunit 1 [Nannochloropsis gaditana])

HSP 1 Score: 2257.64 bits (5849), Expect = 0.000e+0
Identity = 1086/1086 (100.00%), Postives = 1086/1086 (100.00%), Query Frame = 0
Query:    1 MATSPYTVSGRPQTLPSGVHHTRLKWLNGCEARLYCHTSSSSFPPRSPSSSSPPFAPASTNITTPVAKDSSVPRCVVYWMQRSVRSSFNHALEVAIHYANQLDVPLLVVYAIVTSYPGANERGFAFLFEGLHEAQTSLANRGIRLVVREAKVVGENSTRGAAATAVPLTIVDTCKRVKAPLLVMDRAYERLLRTWREDVCARVACPVLMVESDVVVPVDVVSPQPLSSAAALRRAHAPLLSQYLLPLPEGSLRHPSHALPACSPSAPSPLFPDELEMHDPLALLSSLADLDRSVPRVSFKRGGSTQAKLLLARFLRDRLRGYQARRKEAVARHQSFLSPYLHFGHISPIYVALKVRQHASSTPQDRRRFCDELLTWREMAVHFVYHHRESYDRYEGIPRWARESLEEAAEGERRHAYSLTELEEGRTHDLLWNAAQEEMRVTGYMNNYMRMFWCKSIIAWTAEGPREAYRRSLFLNDKYFLDGRDCNGYMGVAWCFGLYDRPMPGFSPIFGKVRRMTANGVRAKQDVGAYICQVKDLAAKVERASRWGREGGGKGHCGDGNIEEHQNGAMLGVEDAIYAKPLSHRVDAFLSPVPERHNAKRKTDGNSESHASYSAGRGLQGKREGEVDGERGGQRKKETKTGASSTNASEEWKGAFWEERRSLQEGRWQPEKETLRKENPGNFSSRKGDLPSWRGPFGQQTSLSEKQLLAQSELPSSHQMADAEAVVSLGDRIEQAKCKAQTLKKEIEEVRKQKDNAMLPGAANNQQLPDFKNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAIRPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSINRHIFVSGSCDATAKVWDTRLGKCVQTHAGHESDVNAVQFFPDGNAFSTGSDDSTCRLFDIRSYGAVNVFGNDKIVSGVTSVSFSASGRLLFAGHDDSSCLAWDVLADGKGLAFQLAGHESRVSCLGVNSTGEALCTGSWDSLLKVWA 1086
            MATSPYTVSGRPQTLPSGVHHTRLKWLNGCEARLYCHTSSSSFPPRSPSSSSPPFAPASTNITTPVAKDSSVPRCVVYWMQRSVRSSFNHALEVAIHYANQLDVPLLVVYAIVTSYPGANERGFAFLFEGLHEAQTSLANRGIRLVVREAKVVGENSTRGAAATAVPLTIVDTCKRVKAPLLVMDRAYERLLRTWREDVCARVACPVLMVESDVVVPVDVVSPQPLSSAAALRRAHAPLLSQYLLPLPEGSLRHPSHALPACSPSAPSPLFPDELEMHDPLALLSSLADLDRSVPRVSFKRGGSTQAKLLLARFLRDRLRGYQARRKEAVARHQSFLSPYLHFGHISPIYVALKVRQHASSTPQDRRRFCDELLTWREMAVHFVYHHRESYDRYEGIPRWARESLEEAAEGERRHAYSLTELEEGRTHDLLWNAAQEEMRVTGYMNNYMRMFWCKSIIAWTAEGPREAYRRSLFLNDKYFLDGRDCNGYMGVAWCFGLYDRPMPGFSPIFGKVRRMTANGVRAKQDVGAYICQVKDLAAKVERASRWGREGGGKGHCGDGNIEEHQNGAMLGVEDAIYAKPLSHRVDAFLSPVPERHNAKRKTDGNSESHASYSAGRGLQGKREGEVDGERGGQRKKETKTGASSTNASEEWKGAFWEERRSLQEGRWQPEKETLRKENPGNFSSRKGDLPSWRGPFGQQTSLSEKQLLAQSELPSSHQMADAEAVVSLGDRIEQAKCKAQTLKKEIEEVRKQKDNAMLPGAANNQQLPDFKNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAIRPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSINRHIFVSGSCDATAKVWDTRLGKCVQTHAGHESDVNAVQFFPDGNAFSTGSDDSTCRLFDIRSYGAVNVFGNDKIVSGVTSVSFSASGRLLFAGHDDSSCLAWDVLADGKGLAFQLAGHESRVSCLGVNSTGEALCTGSWDSLLKVWA
Sbjct:    1 MATSPYTVSGRPQTLPSGVHHTRLKWLNGCEARLYCHTSSSSFPPRSPSSSSPPFAPASTNITTPVAKDSSVPRCVVYWMQRSVRSSFNHALEVAIHYANQLDVPLLVVYAIVTSYPGANERGFAFLFEGLHEAQTSLANRGIRLVVREAKVVGENSTRGAAATAVPLTIVDTCKRVKAPLLVMDRAYERLLRTWREDVCARVACPVLMVESDVVVPVDVVSPQPLSSAAALRRAHAPLLSQYLLPLPEGSLRHPSHALPACSPSAPSPLFPDELEMHDPLALLSSLADLDRSVPRVSFKRGGSTQAKLLLARFLRDRLRGYQARRKEAVARHQSFLSPYLHFGHISPIYVALKVRQHASSTPQDRRRFCDELLTWREMAVHFVYHHRESYDRYEGIPRWARESLEEAAEGERRHAYSLTELEEGRTHDLLWNAAQEEMRVTGYMNNYMRMFWCKSIIAWTAEGPREAYRRSLFLNDKYFLDGRDCNGYMGVAWCFGLYDRPMPGFSPIFGKVRRMTANGVRAKQDVGAYICQVKDLAAKVERASRWGREGGGKGHCGDGNIEEHQNGAMLGVEDAIYAKPLSHRVDAFLSPVPERHNAKRKTDGNSESHASYSAGRGLQGKREGEVDGERGGQRKKETKTGASSTNASEEWKGAFWEERRSLQEGRWQPEKETLRKENPGNFSSRKGDLPSWRGPFGQQTSLSEKQLLAQSELPSSHQMADAEAVVSLGDRIEQAKCKAQTLKKEIEEVRKQKDNAMLPGAANNQQLPDFKNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAIRPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSINRHIFVSGSCDATAKVWDTRLGKCVQTHAGHESDVNAVQFFPDGNAFSTGSDDSTCRLFDIRSYGAVNVFGNDKIVSGVTSVSFSASGRLLFAGHDDSSCLAWDVLADGKGLAFQLAGHESRVSCLGVNSTGEALCTGSWDSLLKVWA 1086          
BLAST of EWM28754.1 vs. NCBI_GenBank
Match: gi|298712832|emb|CBJ48797.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 463.766 bits (1192), Expect = 3.148e-151
Identity = 221/362 (61.05%), Postives = 270/362 (74.59%), Query Frame = 0
Query:  726 VVSLGDRIEQAKCKAQTLKKEIEEVRKQKDNAMLPGAANNQQLPDFKNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAI-RPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSINRHIFVSGSCDATAKVWDTRLGKCVQTHAGHESDVNAVQFFPDGNAFSTGSDDSTCRLFDIRSYGAVNVFGNDKIVSGVTSVSFSASGRLLFAGHDDSSCLAWDVLADGKGLAFQLAGHESRVSCLGVNSTGEALCTGSWDSLLKVWA 1086
            +  + +R+  A+ KA+ LK EI + +  K +  +  AA    L +    + + RR+LKGHFGKVY+MHW+  +  LVSASQDGKLIIWN +TTNKVQ+IPLRSSWVMTC FE T G  VACGGLDN+CS+Y +            GQS + R   EL AHDGYLSCCRF++++S+LTSSGDSTCI WDVE       F DHGGDVMS+S+LPS+++++FVSGSCD+ AKVWD R GKCVQT  GHESD+N+V FFPDG AF TGSDDS+CRLFD+R YG  N FGNDKI+ G+TSV+FS SGRLLFAG+DD +C  WDV       A+QLAGHE+RVSCLGVN  GEALCTGSWD+LLK+WA
Sbjct:    1 MADMTERLAVARKKAEALKSEIAKAQNDKKDCSIQEAAAQIDLKNLGPGL-KARRVLKGHFGKVYAMHWSGDNQNLVSASQDGKLIIWNGYTTNKVQAIPLRSSWVMTCAFEPTQGRFVACGGLDNLCSIYEL------------GQSTVMRATRELAAHDGYLSCCRFVNQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCDSLAKVWDIREGKCVQTFQGHESDINSVMFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIWA 349          
BLAST of EWM28754.1 vs. NCBI_GenBank
Match: gi|224009351|ref|XP_002293634.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220971034|gb|EED89370.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 440.269 bits (1131), Expect = 1.995e-142
Identity = 211/346 (60.98%), Postives = 257/346 (74.28%), Query Frame = 0
Query:  743 LKKEIEEVRKQKDNAMLPGAANNQQLPDF-KNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAIRPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSINRHIFVSGSCDATAKVWDTRLGKCVQTHAGHESDVNAVQFFPDGNAFSTGSDDSTCRLFDIRSYGAVNVFGNDKIVSGVTSVSFSASGRLLFAGHDDSSCLAWDVLADGKGLAFQL-AGHESRVSCLGVNSTGEALCTGSWDSLLKVWA 1086
            LK +IE+ R  K N+ +   A+++ L D  K    ++RR LKGHFGKVY+MHW   S  LVSASQDGKLIIWNA TTNKVQ+IPLRSSWVMTC FEQ+ G L+ACGGLDNVCS+Y          +     S  R + EL+AHDGYLSCCRF+DE  ++TSSGDSTCI+WDV   E + +F+DH  DVMS+++ P  N +IFVSGS D TAKVWD R GKCVQTH GHE+D+N+V FFPDG+AF TGSDD++CRLFD+RSYG VN F +DKI  G+TSV+FS SGRL+F G+DD +   WD L+D    AF L   HE+RVSCLGVN  G+ALCTGSWD+ LK+WA
Sbjct:    2 LKSQIEKARASKQNSTMGSIASSKSLRDIRKPPQTKLRRTLKGHFGKVYAMHWNSDSQTLVSASQDGKLIIWNAFTTNKVQAIPLRSSWVMTCAFEQSKGNLIACGGLDNVCSIYN---------TQQASTSNARASKELVAHDGYLSCCRFVDEGHVVTSSGDSTCIYWDVNSGEVLKTFSDHKSDVMSVAISPE-NNNIFVSGSVDTTAKVWDIRNGKCVQTHIGHEADINSVAFFPDGHAFGTGSDDASCRLFDMRSYGEVNKFKSDKITCGITSVAFSRSGRLMFGGYDDFNTYVWDTLSDADQCAFALPTPHENRVSCLGVNKNGDALCTGSWDTNLKIWA 337          
BLAST of EWM28754.1 vs. NCBI_GenBank
Match: gi|397611547|gb|EJK61374.1| (hypothetical protein THAOC_18152 [Thalassiosira oceanica])

HSP 1 Score: 437.187 bits (1123), Expect = 8.991e-141
Identity = 209/348 (60.06%), Postives = 258/348 (74.14%), Query Frame = 0
Query:  739 KAQTLKKEIEEVRKQKDNAMLPGAANNQQLPDFKNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAIRPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSINRHIFVSGSCDATAKVWDTRLGKCVQTHAGHESDVNAVQFFPDGNAFSTGSDDSTCRLFDIRSYGAVNVFGNDKIVSGVTSVSFSASGRLLFAGHDDSSCLAWDVLADGKGLAFQLAGHESRVSCLGVNSTGEALCTGSWDSLLKVWA 1086
            K  +LK++IE+VR+QK ++ +   A ++       K I++RR LKGHFGKVY+MHWA  S  LVSASQDGKLIIWNA+TTNKVQ+IPLRSSWVMTC FEQT G L+ACGGLDNVCS+Y ++     A          R   EL+AHDGYLSCCRFIDE  +LTSSGDS+CI+WDV   + + +F DH  DVMS++V P+ N  +FV+GS D TAK+WD R  KCVQTH GH+ D+N V +FPDGNAFSTGSDDS+CRLFD+RSYG VN F +DKI  G+TSV+FS SGRLLF G+DD +   WD L+D          HE+RVSCLG+N+ G+ALCTGSWD+ LK+WA
Sbjct:   30 KVASLKQQIEDVRQQKQSSSMGAVAASKGPLREIRKPIKMRRTLKGHFGKVYAMHWASDSQTLVSASQDGKLIIWNAYTTNKVQAIPLRSSWVMTCAFEQTKGDLIACGGLDNVCSIYNINQQTANA----------RATTELVAHDGYLSCCRFIDEGHILTSSGDSSCIYWDVSSGDVLKTFTDHTSDVMSVAVSPN-NPSVFVTGSVDTTAKIWDLRNAKCVQTHTGHDQDINTVAWFPDGNAFSTGSDDSSCRLFDMRSYGEVNKFKSDKISCGITSVAFSKSGRLLFGGYDDFNTYVWDTLSDSAQPMALPNPHENRVSCLGMNAKGDALCTGSWDTNLKIWA 366          
BLAST of EWM28754.1 vs. NCBI_GenBank
Match: gi|567975320|gb|ETL25877.1| (hypothetical protein L916_20344 [Phytophthora parasitica] >gi|570936645|gb|ETP01902.1| hypothetical protein F441_20939 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 434.106 bits (1115), Expect = 6.403e-140
Identity = 211/361 (58.45%), Postives = 260/361 (72.02%), Query Frame = 0
Query:  729 LGDRIEQAKCKAQTLKKEIEEVRKQKDNAMLPGA---ANNQQLPDFKNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAIRPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSINRHIFVSGSCDATAKVWDTRLGKCVQTHAGHESDVNAVQFFPDGNAFSTGSDDSTCRLFDIRSYGAVNVFGNDKIVSGVTSVSFSASGRLLFAGHDDSSCLAWDVLADGKGLAFQLAGHESRVSCLGVNSTGEALCTGSWDSLLKVWA 1086
            +GD  E  K K ++LK+ IE+ R+ K +     A   A  + +P       + RR+LKGHFGK+Y+M W   S+ LVSASQDGKLI+WNA TTNK+Q+IPLRSSWVMTC FEQ    +VACGGLDN+CS++ +S            +  +R   EL AHDGYLSCCRFIDE S++TSSGDS CI WDVE  E  T+F +H GDVMS+S+ P  N  +F+SGSCD+TAKVWD R GK   T  GHESD+N+V FFP GNA  TGSDDS+CRLFD+R+YG +N F NDKI+ G+TSVSFS SGR LFAG+DD +C  WDVL+      +QLAGHE+RVSCLGVN  G+ALCTGSWD+LLK+WA
Sbjct:    1 MGDAAELKK-KCESLKETIEKTREAKSDGGFQSANASAGAKAIP----APPKCRRLLKGHFGKIYAMQWGGDSSSLVSASQDGKLIVWNAQTTNKIQAIPLRSSWVMTCAFEQKQRNMVACGGLDNLCSIFHLSQ-----------EQVMRATKELAAHDGYLSCCRFIDEASIVTSSGDSNCILWDVESGEVKTTFREHSGDVMSVSINPH-NPSMFISGSCDSTAKVWDIRTGKTTHTFQGHESDINSVDFFPSGNALGTGSDDSSCRLFDLRAYGELNNFSNDKILCGITSVSFSKSGRFLFAGYDDYNCYCWDVLSTSGAHIYQLAGHENRVSCLGVNPAGQALCTGSWDTLLKIWA 344          
BLAST of EWM28754.1 vs. NCBI_GenBank
Match: gi|675211675|ref|XP_008914722.1| (hypothetical protein PPTG_18378 [Phytophthora parasitica INRA-310] >gi|566009124|gb|ETI32035.1| hypothetical protein F443_21079 [Phytophthora parasitica P1569] >gi|567946615|gb|ETK72421.1| hypothetical protein L915_20482 [Phytophthora parasitica] >gi|568004769|gb|ETL79081.1| hypothetical protein L917_20222 [Phytophthora parasitica] >gi|568034682|gb|ETM32349.1| hypothetical protein L914_20235 [Phytophthora parasitica] >gi|568085080|gb|ETM99995.1| hypothetical protein PPTG_18378 [Phytophthora parasitica INRA-310] >gi|570312836|gb|ETO60784.1| hypothetical protein F444_21084 [Phytophthora parasitica P1976] >gi|570966930|gb|ETP30049.1| hypothetical protein F442_20891 [Phytophthora parasitica P10297] >gi|970642921|gb|KUF84402.1| G-protein beta subunit 1 [Phytophthora nicotianae])

HSP 1 Score: 433.335 bits (1113), Expect = 1.422e-139
Identity = 211/361 (58.45%), Postives = 259/361 (71.75%), Query Frame = 0
Query:  729 LGDRIEQAKCKAQTLKKEIEEVRKQKDNAMLPGA---ANNQQLPDFKNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAIRPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSINRHIFVSGSCDATAKVWDTRLGKCVQTHAGHESDVNAVQFFPDGNAFSTGSDDSTCRLFDIRSYGAVNVFGNDKIVSGVTSVSFSASGRLLFAGHDDSSCLAWDVLADGKGLAFQLAGHESRVSCLGVNSTGEALCTGSWDSLLKVWA 1086
            +GD  E  K K ++LK+ IE+ R+ K +     A   A  + +P       + RR+LKGHFGK+Y+M W   S+ LVSASQDGKLI+WNA TTNK+Q+IPLRSSWVMTC FEQ    +VACGGLDN+CS++ +S               +R   EL AHDGYLSCCRFIDE S++TSSGDS CI WDVE  E  T+F +H GDVMS+S+ P  N  +F+SGSCD+TAKVWD R GK   T  GHESD+N+V FFP GNA  TGSDDS+CRLFD+R+YG +N F NDKI+ G+TSVSFS SGR LFAG+DD +C  WDVL+      +QLAGHE+RVSCLGVN  G+ALCTGSWD+LLK+WA
Sbjct:    1 MGDAAELKK-KCESLKETIEKTREAKSDGGFQSANASAGAKAIP----APPKCRRLLKGHFGKIYAMQWGGDSSSLVSASQDGKLIVWNAQTTNKIQAIPLRSSWVMTCAFEQKQRNMVACGGLDNLCSIFHLSQA-----------QVMRATKELAAHDGYLSCCRFIDEASIVTSSGDSNCILWDVESGEVKTTFREHSGDVMSVSINPH-NPSMFISGSCDSTAKVWDIRTGKTTHTFQGHESDINSVDFFPSGNALGTGSDDSSCRLFDLRAYGELNNFSNDKILCGITSVSFSKSGRFLFAGYDDYNCYCWDVLSTSGAHIYQLAGHENRVSCLGVNPAGQALCTGSWDTLLKIWA 344          
BLAST of EWM28754.1 vs. NCBI_GenBank
Match: gi|673050783|ref|XP_008879352.1| (hypothetical protein H310_13580 [Aphanomyces invadans] >gi|698821325|ref|XP_009843691.1| hypothetical protein H257_16817 [Aphanomyces astaci] >gi|574101322|gb|ETV66888.1| hypothetical protein H257_16817 [Aphanomyces astaci] >gi|574465013|gb|ETV92055.1| hypothetical protein H310_13580 [Aphanomyces invadans])

HSP 1 Score: 431.795 bits (1109), Expect = 3.695e-139
Identity = 209/359 (58.22%), Postives = 260/359 (72.42%), Query Frame = 0
Query:  729 LGDRIEQAKCKAQTLKKEIEEVRKQKDNAMLPGAANNQQLPDFKNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAI-RPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSINRHIFVSGSCDATAKVWDTRLGKCVQTHAGHESDVNAVQFFPDGNAFSTGSDDSTCRLFDIRSYGAVNVFGNDKIVSGVTSVSFSASGRLLFAGHDDSSCLAWDVLADGKGLAFQLAGHESRVSCLGVNSTGEALCTGSWDSLLKVWA 1086
            +GD  E  K K   LK +I+ VR  K N            P       + RR+LKGHFGK+Y+M W   ST LVSASQDGKLI+WNA TTNKVQ+IPLRSSWVMTC +EQ    +VACGGLDN+CS+Y++            GQ+ + R   EL AHDGYLSCCRF+DE +++TSSGDSTCI WDVE  E  T+F DH GDVMS+S+ P  ++++F+SGSCD+TAKVWD R GK   +  GHESD+N+V FFPDGNA  TGSDDS+CRLFD+R+YG +N F NDKI+ G+TSVS+S SGR +FAG+DD +C  WDVL++     +QL GHE+RVSCLGV+ +G+ALCTGSWD+LLKVWA
Sbjct:    1 MGDVAELKK-KCDGLKDKIQSVRTAKSNGGFENDGTKAIPP-----APKCRRVLKGHFGKIYAMQWGGDSTSLVSASQDGKLIVWNAQTTNKVQAIPLRSSWVMTCAYEQKQRNMVACGGLDNLCSIYQL------------GQAQVMRATKELAAHDGYLSCCRFLDEANIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVSINPH-HQNMFISGSCDSTAKVWDVRSGKSTHSFHGHESDINSVDFFPDGNALGTGSDDSSCRLFDLRAYGELNNFSNDKILCGITSVSYSKSGRFMFAGYDDYNCYCWDVLSNTGAHVYQLTGHENRVSCLGVSPSGQALCTGSWDTLLKVWA 340          
BLAST of EWM28754.1 vs. NCBI_GenBank
Match: gi|1173929697|gb|OQR82884.1| (guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta [Achlya hypogyna])

HSP 1 Score: 431.409 bits (1108), Expect = 6.562e-139
Identity = 212/359 (59.05%), Postives = 259/359 (72.14%), Query Frame = 0
Query:  729 LGDRIEQAKCKAQTLKKEIEEVRKQKDNAMLPGAANNQQLPDFKNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAI-RPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSINRHIFVSGSCDATAKVWDTRLGKCVQTHAGHESDVNAVQFFPDGNAFSTGSDDSTCRLFDIRSYGAVNVFGNDKIVSGVTSVSFSASGRLLFAGHDDSSCLAWDVLADGKGLAFQLAGHESRVSCLGVNSTGEALCTGSWDSLLKVWA 1086
            +GD  E  K K + LK +I+ VR QK N            P  K      RR+LKGHFGK+Y+M W   S+ LVSASQDGKLI+WNA TTNKVQ+IPLRSSWVMTC +EQ    +VACGGLDN+CS+Y +            GQ+ + R A EL AHDGYLSCCRFIDE +++TSSGDSTCI WDVE  E  T+F DH GDVMS+++ P  + ++F+SGSCD+TAKVWD R GK   +  GHESD+N+V FFP+G A  TGSDDS+CRLFD+R+YG VN F NDKI+ G+TSVSFS SGR LFAG+DD +C  WD L++     +QL GHE+RVSCLGV+ TG+ALCTGSWD+LLKVWA
Sbjct:    1 MGDVAELKK-KCEALKDKIQSVRTQKSNGGFENDGTKAIPPAPK-----CRRVLKGHFGKIYAMQWGGDSSSLVSASQDGKLIVWNAMTTNKVQAIPLRSSWVMTCAYEQKQRNMVACGGLDNLCSIYHL------------GQAQVMRAAKELAAHDGYLSCCRFIDETNIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVAINPH-HPNMFISGSCDSTAKVWDLRAGKVTHSFHGHESDINSVDFFPNGTALGTGSDDSSCRLFDLRAYGEVNNFSNDKILCGITSVSFSKSGRFLFAGYDDYNCYCWDTLSNTGQHVYQLTGHENRVSCLGVSPTGQALCTGSWDTLLKVWA 340          
BLAST of EWM28754.1 vs. NCBI_GenBank
Match: gi|325187813|emb|CCA22357.1| (G protein beta subunit 1 putative [Albugo laibachii Nc14])

HSP 1 Score: 430.639 bits (1106), Expect = 1.508e-138
Identity = 206/357 (57.70%), Postives = 261/357 (73.11%), Query Frame = 0
Query:  733 IEQAKCKAQTLKKEIEEVRKQKDNA---MLPGAANNQQLPDFKNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAIRPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSINRHIFVSGSCDATAKVWDTRLGKCVQTHAGHESDVNAVQFFPDGNAFSTGSDDSTCRLFDIRSYGAVNVFGNDKIVSGVTSVSFSASGRLLFAGHDDSSCLAWDVLADGKGLAFQLAGHESRVSCLGVNSTGEALCTGSWDSLLKVWA 1086
            + + K K   LK++IE+ R++K +     + G A  + LP       + RR+LKGHFGK+Y+M W   ST LVSASQDGKLI+WNA +TNKVQSIPLRSSWVMTC FEQ    +VACGGLDN+CS++ +S               +R   EL AHDGYLSCCRFIDE  ++TSSGDS CI WD+E  E  T+F +H GDVMS+S+  + N ++F+SGSCD+TAKVWD R GK   T  GHESD+N+V FFP+GNA  TGSDDS+CRLFD+R+YG +N F +DKI+ G+TSV+FS SGR LFAG+DD +C  WDVL+      +QLAGHE+RVSCLGVN++G+ALCTGSWD+LLK+WA
Sbjct:    4 VAELKRKCAQLKEKIEQTREEKLDGGFEKIGGNAGAKPLP----AAPKFRRLLKGHFGKIYAMQWGGDSTSLVSASQDGKLIVWNAQSTNKVQSIPLRSSWVMTCAFEQNQRNMVACGGLDNLCSIFHLSQA-----------QVMRATKELAAHDGYLSCCRFIDEHQIVTSSGDSNCILWDIESGEVKTTFREHSGDVMSVSI-NAQNPNMFISGSCDSTAKVWDIRAGKTTHTFQGHESDINSVSFFPNGNALGTGSDDSSCRLFDLRAYGELNNFSSDKILCGITSVAFSKSGRFLFAGYDDYNCYCWDVLSTSGQHVYQLAGHENRVSCLGVNTSGQALCTGSWDTLLKIWA 344          
BLAST of EWM28754.1 vs. NCBI_GenBank
Match: gi|635366816|emb|CCI10083.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 430.254 bits (1105), Expect = 1.677e-138
Identity = 205/357 (57.42%), Postives = 261/357 (73.11%), Query Frame = 0
Query:  733 IEQAKCKAQTLKKEIEEVRKQKDNA---MLPGAANNQQLPDFKNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAIRPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSINRHIFVSGSCDATAKVWDTRLGKCVQTHAGHESDVNAVQFFPDGNAFSTGSDDSTCRLFDIRSYGAVNVFGNDKIVSGVTSVSFSASGRLLFAGHDDSSCLAWDVLADGKGLAFQLAGHESRVSCLGVNSTGEALCTGSWDSLLKVWA 1086
            + + K K   LK++IE+ R++K +     + G+A  + +P       + RR+LKGHFGK+Y+M W   ST LVSASQDGKLI+WNA +TNKVQSIPLRSSWVMTC FEQ    +VACGGLDN+CS++ +S               +R   EL AHDGYLSCCRFIDE  ++TSSGDS CI WD+E  E  T F +H GDVMS+S+  + N ++F+SGSCD+TAKVWD R GK   T  GHESD+N+V FFP+GNA  TGSDDS+CRLFD+R+YG +N F +DKI+ G+TSV+FS SGR LFAG+DD +C  WDVL+      +QLAGHE+RVSCLGVN++G+ALCTGSWD+LLK+WA
Sbjct:    4 VAELKRKCAQLKEKIEQTREEKLDGGFEKIGGSAGAKAIP----AAPKFRRLLKGHFGKIYAMQWGGDSTSLVSASQDGKLIVWNAQSTNKVQSIPLRSSWVMTCAFEQNQRNMVACGGLDNLCSIFHLSQA-----------QVMRATKELAAHDGYLSCCRFIDEHQIVTSSGDSNCILWDIESGEVKTMFREHSGDVMSVSI-NAQNPNMFISGSCDSTAKVWDIRAGKTTHTFQGHESDINSVSFFPNGNALGTGSDDSSCRLFDLRAYGELNNFSSDKILCGITSVAFSKSGRFLFAGYDDYNCYCWDVLSTSGQHVYQLAGHENRVSCLGVNTSGQALCTGSWDTLLKIWA 344          
The following BLAST results are available for this feature:
BLAST of EWM28754.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111177|gb|EWM28754.1|0.000e+0100.00g-protein beta subunit 1 [Nannochloropsis gaditana... [more]
gi|298712832|emb|CBJ48797.1|3.148e-15161.05conserved unknown protein [Ectocarpus siliculosus][more]
gi|224009351|ref|XP_002293634.1|1.995e-14260.98predicted protein, partial [Thalassiosira pseudona... [more]
gi|397611547|gb|EJK61374.1|8.991e-14160.06hypothetical protein THAOC_18152 [Thalassiosira oc... [more]
gi|567975320|gb|ETL25877.1|6.403e-14058.45hypothetical protein L916_20344 [Phytophthora para... [more]
gi|675211675|ref|XP_008914722.1|1.422e-13958.45hypothetical protein PPTG_18378 [Phytophthora para... [more]
gi|673050783|ref|XP_008879352.1|3.695e-13958.22hypothetical protein H310_13580 [Aphanomyces invad... [more]
gi|1173929697|gb|OQR82884.1|6.562e-13959.05guanine nucleotide-binding protein G(I)/G(S)/G(T) ... [more]
gi|325187813|emb|CCA22357.1|1.508e-13857.70G protein beta subunit 1 putative [Albugo laibachi... [more]
gi|635366816|emb|CCI10083.1|1.677e-13857.42unnamed protein product [Albugo candida][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1889rna1889Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications