EWM28670.1, cds1883 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28670.1 vs. NCBI_GenBank
Match: gi|585111093|gb|EWM28670.1| (hypothetical protein Naga_100002g134 [Nannochloropsis gaditana]) HSP 1 Score: 203.756 bits (517), Expect = 1.994e-66 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
Query: 1 MSRRNVPERASATAQEKAALTSTNTAAVDVDDLDAWGVFKKALIFQGQWNKETFPQFLDVIYWFRQVLALVIGVVWGRAASRGGTAIMSFAALVRRLRKST 101
MSRRNVPERASATAQEKAALTSTNTAAVDVDDLDAWGVFKKALIFQGQWNKETFPQFLDVIYWFRQVLALVIGVVWGRAASRGGTAIMSFAALVRRLRKST
Sbjct: 1 MSRRNVPERASATAQEKAALTSTNTAAVDVDDLDAWGVFKKALIFQGQWNKETFPQFLDVIYWFRQVLALVIGVVWGRAASRGGTAIMSFAALVRRLRKST 101
BLAST of EWM28670.1 vs. NCBI_GenBank
Match: gi|844867718|ref|XP_012799620.1| (Uncharacterized protein C20orf24-like protein, partial [Schistosoma haematobium] >gi|685965128|gb|KGB39862.1| Uncharacterized protein C20orf24-like protein, partial [Schistosoma haematobium]) HSP 1 Score: 56.6102 bits (135), Expect = 4.181e-8 Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
Query: 36 WGVFKKALIFQGQWNKETFPQFLDVIYWFRQVLALVIGVVWGRAASRGGTAIMSF 90
+G+F KAL Q ++ + FLDV+YWFRQV A+++GVVWG A+ G AI+ F
Sbjct: 10 YGIFLKALKMQSVFDDKN--DFLDVVYWFRQVFAIIVGVVWGVASFTGFVAILMF 62
BLAST of EWM28670.1 vs. NCBI_GenBank
Match: gi|76156446|gb|AAX27655.2| (SJCHGC09444 protein, partial [Schistosoma japonicum]) HSP 1 Score: 58.5362 bits (140), Expect = 6.991e-8 Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 0
Query: 33 LDAWGVFKKALIFQGQWNKETFPQFLDVIYWFRQVLALVIGVVWGRAASRGGTAIMSF 90
L ++ +F KAL + +N + FLD+IYWFRQV A++IGVVWG A+ G AI+ F
Sbjct: 12 LSSYDIFLKALKTESVFNDKN--DFLDIIYWFRQVFAIIIGVVWGLASFTGFLAIVMF 67
BLAST of EWM28670.1 vs. NCBI_GenBank
Match: gi|226482336|emb|CAX73767.1| (hypotheticial protein [Schistosoma japonicum]) HSP 1 Score: 56.225 bits (134), Expect = 7.193e-8 Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 0
Query: 33 LDAWGVFKKALIFQGQWNKETFPQFLDVIYWFRQVLALVIGVVWGRAASRGGTAIMSF 90
L ++ +F KAL + +N + FLD+IYWFRQV A++IGVVWG A+ G AI+ F
Sbjct: 12 LSSYDIFLKALKTESVFNDKN--DFLDIIYWFRQVFAIIIGVVWGLASFTGFLAIVMF 67 The following BLAST results are available for this feature:
BLAST of EWM28670.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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