EWM28725.1, cds1860 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28725.1 vs. NCBI_GenBank
Match: gi|585111148|gb|EWM28725.1| (PsbB mRNA maturation factor [Nannochloropsis gaditana]) HSP 1 Score: 1819.28 bits (4711), Expect = 0.000e+0 Identity = 887/887 (100.00%), Postives = 887/887 (100.00%), Query Frame = 0
Query: 1 MVESRRRRRPGSSVLVTTTTAVLLLHTSWTSAAPSSSSAPSPNTCLPPRPLHQGAFLSPRTPFRWGSKSRSNSDSTQTKPSEDAFCSTCNFMAASVSFSPTLVLPASRTDDVTSPHAAPADPPADFAPPISPPGTNLMKGGKGSIGNSKNSNARSKGPKPGLLYVLQGVRDRETIRGSSEAEAERAVAVVGLKGKSNAPLSSLERAKARMPRLEERVAEEVEGSVGETGWGNQDEDEGAGTVRMGYREGDVAEEEGTEEAGPPLPYLPSQAEDLEAKIAEAETASNSLEILSKAVNERMLEEKFDNVRAPYREPREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVLLIRPEAEIYWTQYEVMERRFGHVEHAMRIEQRRHLAFGGKSGGGPHGGGGGTRDAKQGGRGVEGYDKGSRMMGLFDSFQEVYALPRGTMEEEKGRGRIWGPLGGKDRAKRSVGWRADGQSKGREADEEQEEAEHSREQPQRGRIGGSATGVFPPPSPRRSREDAPVFDTFLEGGFTREGETGQLHGNVTLGIA 887
MVESRRRRRPGSSVLVTTTTAVLLLHTSWTSAAPSSSSAPSPNTCLPPRPLHQGAFLSPRTPFRWGSKSRSNSDSTQTKPSEDAFCSTCNFMAASVSFSPTLVLPASRTDDVTSPHAAPADPPADFAPPISPPGTNLMKGGKGSIGNSKNSNARSKGPKPGLLYVLQGVRDRETIRGSSEAEAERAVAVVGLKGKSNAPLSSLERAKARMPRLEERVAEEVEGSVGETGWGNQDEDEGAGTVRMGYREGDVAEEEGTEEAGPPLPYLPSQAEDLEAKIAEAETASNSLEILSKAVNERMLEEKFDNVRAPYREPREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVLLIRPEAEIYWTQYEVMERRFGHVEHAMRIEQRRHLAFGGKSGGGPHGGGGGTRDAKQGGRGVEGYDKGSRMMGLFDSFQEVYALPRGTMEEEKGRGRIWGPLGGKDRAKRSVGWRADGQSKGREADEEQEEAEHSREQPQRGRIGGSATGVFPPPSPRRSREDAPVFDTFLEGGFTREGETGQLHGNVTLGIA
Sbjct: 1 MVESRRRRRPGSSVLVTTTTAVLLLHTSWTSAAPSSSSAPSPNTCLPPRPLHQGAFLSPRTPFRWGSKSRSNSDSTQTKPSEDAFCSTCNFMAASVSFSPTLVLPASRTDDVTSPHAAPADPPADFAPPISPPGTNLMKGGKGSIGNSKNSNARSKGPKPGLLYVLQGVRDRETIRGSSEAEAERAVAVVGLKGKSNAPLSSLERAKARMPRLEERVAEEVEGSVGETGWGNQDEDEGAGTVRMGYREGDVAEEEGTEEAGPPLPYLPSQAEDLEAKIAEAETASNSLEILSKAVNERMLEEKFDNVRAPYREPREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVLLIRPEAEIYWTQYEVMERRFGHVEHAMRIEQRRHLAFGGKSGGGPHGGGGGTRDAKQGGRGVEGYDKGSRMMGLFDSFQEVYALPRGTMEEEKGRGRIWGPLGGKDRAKRSVGWRADGQSKGREADEEQEEAEHSREQPQRGRIGGSATGVFPPPSPRRSREDAPVFDTFLEGGFTREGETGQLHGNVTLGIA 887
BLAST of EWM28725.1 vs. NCBI_GenBank
Match: gi|585111149|gb|EWM28726.1| (PsbB mRNA maturation factor [Nannochloropsis gaditana]) HSP 1 Score: 1330.08 bits (3441), Expect = 0.000e+0 Identity = 647/647 (100.00%), Postives = 647/647 (100.00%), Query Frame = 0
Query: 1 MVESRRRRRPGSSVLVTTTTAVLLLHTSWTSAAPSSSSAPSPNTCLPPRPLHQGAFLSPRTPFRWGSKSRSNSDSTQTKPSEDAFCSTCNFMAASVSFSPTLVLPASRTDDVTSPHAAPADPPADFAPPISPPGTNLMKGGKGSIGNSKNSNARSKGPKPGLLYVLQGVRDRETIRGSSEAEAERAVAVVGLKGKSNAPLSSLERAKARMPRLEERVAEEVEGSVGETGWGNQDEDEGAGTVRMGYREGDVAEEEGTEEAGPPLPYLPSQAEDLEAKIAEAETASNSLEILSKAVNERMLEEKFDNVRAPYREPREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSG 647
MVESRRRRRPGSSVLVTTTTAVLLLHTSWTSAAPSSSSAPSPNTCLPPRPLHQGAFLSPRTPFRWGSKSRSNSDSTQTKPSEDAFCSTCNFMAASVSFSPTLVLPASRTDDVTSPHAAPADPPADFAPPISPPGTNLMKGGKGSIGNSKNSNARSKGPKPGLLYVLQGVRDRETIRGSSEAEAERAVAVVGLKGKSNAPLSSLERAKARMPRLEERVAEEVEGSVGETGWGNQDEDEGAGTVRMGYREGDVAEEEGTEEAGPPLPYLPSQAEDLEAKIAEAETASNSLEILSKAVNERMLEEKFDNVRAPYREPREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSG
Sbjct: 1 MVESRRRRRPGSSVLVTTTTAVLLLHTSWTSAAPSSSSAPSPNTCLPPRPLHQGAFLSPRTPFRWGSKSRSNSDSTQTKPSEDAFCSTCNFMAASVSFSPTLVLPASRTDDVTSPHAAPADPPADFAPPISPPGTNLMKGGKGSIGNSKNSNARSKGPKPGLLYVLQGVRDRETIRGSSEAEAERAVAVVGLKGKSNAPLSSLERAKARMPRLEERVAEEVEGSVGETGWGNQDEDEGAGTVRMGYREGDVAEEEGTEEAGPPLPYLPSQAEDLEAKIAEAETASNSLEILSKAVNERMLEEKFDNVRAPYREPREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSG 647 HSP 2 Score: 90.1225 bits (222), Expect = 7.214e-15 Identity = 71/255 (27.84%), Postives = 115/255 (45.10%), Query Frame = 0
Query: 472 REGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVLLIRPEAEIYWTQYEVMERRFGHVEHAMRIEQR 726
R+ N A ++ ++ E++ + + A +E N A +Y+ AL+ ++ QA+ ++ GN A LF + I P A+ A L E G A FQ +Q +P + L+ A+G+ G AR + + T+ NPR + WHAWAVME++ N +LA ++ AL+ S T A A LE+ GN E L+ + RP + Y + + G + AM I Q+
Sbjct: 336 RKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNS---FCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQK 587
BLAST of EWM28725.1 vs. NCBI_GenBank
Match: gi|298707953|emb|CBJ30324.1| (PsbB mRNA maturation factor Mbb1 [Ectocarpus siliculosus]) HSP 1 Score: 328.946 bits (842), Expect = 8.935e-96 Identity = 188/504 (37.30%), Postives = 277/504 (54.96%), Query Frame = 0
Query: 279 AEAETASNSLEILSKAVNERMLEEKFDNVRAP-------------YREPREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVLLIRPEAEIYWTQYEVMERRFGHVEHAMRIEQRRHLA-FGGKSGGGPHGGGGGTRDAKQGGRGVEGYDKGSRMMGL 768
A + ASN E LS V + EE V P + R +PL LDLL+Y AK+ K N EA R+Y+ C+ELD DGR ++GLAR + AQ ++E L CADNP++LQA+ V +++ GN KA+ L + ++R P+H+A+W+ L R EARG FQTA +++P N W W + E+R G+ VAR+ + ++NPRN+ + AW V+E ++ LA +L++ L+ P++++ QAWA +E +GN + A SLF+ I KRP DG +Q YAL LK+ G++ A +F KG + P HCP +QA+GML ELG+ AR +F+ G NP+G +V I AW ++E GN++ AR+YF AL R S+P +VA A +EE G++ R+L+E + + W YE +E R G E A+ + QR +A GK P G D RG D+ SR + +
Sbjct: 287 AGSAAASNKTE-LSAKVEAELFEEYDAMVPGPAASAVGNNAGGDGAGQERTGRPLKINLDLLSYQAKQKNMKGNYREARRLYRTCVELDPRDGRGWLGLARQMQKIHKYDKAQRLFEAGLENCADNPYLLQAFAVMEEQRGNQAKALTLLNRSVRMHPEHTASWVALGLLNERNKRIDEARGCFQTATRNDPRNHYAWLVWAMLEKRIGSIDVAREKFKMCLKVNPRNAKVYQAWGVLEASEGSIALATELFRAGLEQRPDNTYIMQAWALMEAKQGNTDAAISLFKEAILKRPRDGAVWQAYALLLKDMGDVAGARALFSKGTTQSPKHCPTWQAWGMLEWELGQISRARKLFQEGVWGNPKGPYVVRILQAWGILEATQGNWDDARKYFGFALARDPYSLPVMVAWALMEEYVGDIGRARQLFEIATTTQADNADIWNVYEQVEMRAGFPEEAVAVYQRGVVAVMAGKKEPPPKERGPSLLDPAT-ARGPSLLDEASRSLSM 788
BLAST of EWM28725.1 vs. NCBI_GenBank
Match: gi|551664101|ref|XP_005834814.1| (hypothetical protein GUITHDRAFT_162599 [Guillardia theta CCMP2712] >gi|428178961|gb|EKX47834.1| hypothetical protein GUITHDRAFT_162599 [Guillardia theta CCMP2712]) HSP 1 Score: 280.796 bits (717), Expect = 1.002e-76 Identity = 153/443 (34.54%), Postives = 238/443 (53.72%), Query Frame = 0
Query: 291 LSKAVNERMLEEKFDNVRAPYREPREP-KPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVLLIRPEAEIYWTQYEVMERR-FGH-VEHAMRIEQRRHLA 730
LS+ V +L+ + R+ P K L LDL++Y A+ AL+++ ++ +Y++C+++D YDGRA++GLA++ + A+ + + L+ +PF+LQA G +Q+ G + +A++LF A+ H+A+W+ +L + R AR + A P + W V E REGN AR L +K T++NP N+ W AW ME+ N+D A +L Q LKA P ++ QA A +E +RGN E A L I P DGG YQ YA+ L G+ A E+F++G E H L+QA+ + E ARSIF++G + ++ +W AW +ME GN + AR+YF +A++ R P+L A A++EE GN+ REL E+ L I P E W + +R +G E A + QRR +A
Sbjct: 561 LSEKVKGTLLDSLAPFIDGSERDSVAPSKVLKINLDLMSYAARRALQRKEFDKSEDLYRKCLQMDAYDGRAWVGLAKLYEEKNQMFKAKEILQSGLQKLPRSPFLLQALGCIEQKQGQVVEALKLFQRAVEEDETHAASWVSLGKLEERMKRSWRARQCYAKAASVEPNSFYAWQCLAVLEAREGNLRAARSLFQKCTDVNPMNAASWQAWGTMERRAGNLDKAAELLQKGLKASPKNTFVLQALANIECERGNTEKAIELLERAIEINPKDGGVYQAYAMLLARSGKRMQAREMFKRGCSEAKKHAALWQAWAVHELERKNVKEARSIFQQGVWEAGSDKKIFVLWQAWGLMEASEGNLDEARKYFARAVDVADRPSPSLAAWAKVEEEAGNLIESRELLEKALAIEPSNEYAWDGLQAFVKRVYGEGSEEAKEVYQRRIVA 1003
BLAST of EWM28725.1 vs. NCBI_GenBank
Match: gi|546323723|ref|XP_005718161.1| (TPR repeat-containing protein [Chondrus crispus] >gi|507114747|emb|CDF38276.1| TPR repeat-containing protein [Chondrus crispus]) HSP 1 Score: 241.121 bits (614), Expect = 6.913e-65 Identity = 159/516 (30.81%), Postives = 255/516 (49.42%), Query Frame = 0
Query: 314 PREPKPLPYQLDLLTYYAK-EALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCADNPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKRE---ARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVLLIRPEAEIYWTQYEVMERRFGHVEHAMRIEQRRHLA--------FGGKSGGGPHGGGGGTRDAKQGGRGVEGYDKGSRMMGLFDSFQEVYALPRGTMEEEKGRGRIWGPLGGKDRAKRSVGWRADGQSKGR 817
P PLP QLDLL Y+A+ + R+ A R+Y+RC++++ DGRA++GLA++ + A+ + + N +LQA+GV ++R G + +A ++AA+R P+H+ +W+ LW + + AR F+ ++++P N +WH GV E+ F VAR+ R+ NP N+ + W +E L N +A +L+Q A A P ++H Y + A + G+ A SL + I RP D Q L GE+ A F+ L+ D H P + A+ + + LG + AR +++ P +HV WHAWA +E + GN +ARRYF LE S+SVP L LA +E MEGN+ RE +E + ++P A+ W YE +ER +G + A + +R + GK G + GG DA + V +D +G D+ Q + P G +E + ++K +V R+ + GR
Sbjct: 146 PLHLTPLPVQLDLLNYHARVASRRRNTRARARRLYRRCVDINSADGRAWLGLAKLHLAEGDVANARKTFRGGVNSSRKNSHLLQAWGVLEEREGFVDRAKGFYEAAVRANPQHTPSWVALG--LWYRRVRNDVVHAREMFRNGIEADPTNYYVWHVLGVLEKDCLQFPVARECFRRGVAANPNNAATYVLWGSLEDSLGNFAVAFELFQKAHVANPRNAHAYVSHAVCAERSGDVGKAISLLETAIEVRPNDPAPRQTLGLVHFRSGEVEQARAQFKAALRIDDKHGPTWHAWARVESALGLFERARELYQEAVWAAPESKHVVKTWHAWASLELEEGNCRVARRYFAHGLEVDSKSVPLLEGLATVEAMEGNMMQAREYFETCIRLQPSAKATWRLYEDLEREYGSAKRAQLVYERFVVTSKQVDERLVVGKPLPGDYAAGGMWIDALELKPTVSAFDS----VGNIDTDQVPFIKPFGREGDEVEKSSEEDASSPAIQSKVTVSRRSTAKKHGR 655
BLAST of EWM28725.1 vs. NCBI_GenBank
Match: gi|1210526208|dbj|GAX15126.1| (hypothetical protein FisN_12Lh178 [Fistulifera solaris]) HSP 1 Score: 237.269 bits (604), Expect = 5.460e-63 Identity = 154/448 (34.38%), Postives = 232/448 (51.79%), Query Frame = 0
Query: 311 YRE-PREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCAD----------NPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQL-LWELGRKREA-RGYFQTA-----VQSNPENEVLWHAWGVAE-RREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDR--GNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERG-------TQTNPRGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVL----LIRPEAEIYWTQYEVMERRFGHVEHAMRIEQR 726
YRE R LP D L Y AK+ ++K V EA +Y+R +E+D DGRAY+GL+R RR++ A+ + A NPF+LQA G +++ G L +A L+ +A+R P H+A W+ AQ+ +LG+ A R F+ A P++ ++ AW E ++ G+ A+KLL+ A EI+P+ S W ++E +L+N D A + ++N L +S QA+A +E R GN A LF + P D G Q Y L + + G++ +A E+ KG + D H P++QA G+L G + ARSIF++G T G + +W AW V+E + GN ARR F +AL+ SR+VP + A + +EE GN + R +YER L + W YE+ME+R G A R+ QR
Sbjct: 251 YREGVRLGNALPINADRLNYMAKKEMKKGRVEEAEELYERAVEIDPRDGRAYLGLSRCAQRRQDFKLAREWLNLGIANSASTFNGNPDRGANPFLLQALGCLEEKAGQLSQAESLYTSAVRSRPSHAAGWVALAQIRTRKLGQSVGAGRSCFEAAERELKASGLPQSSHVYTAWADLELKKAGDARRAKKLLKMALEIDPKCSVGWLQLGMLESDLQNWDKAEECFENVLTFDQRNSRVLQAYAIMETKRPDGNSRKAIGLFERALKANPRDAGVLQAYGLYVAKLGDIKSARELLWKGTEVDKRHAPIWQALGVLETRSGNPEEARSIFQQGIWACAQLTGCKSGGHNCARLWQAWGVLEAEEGNHAAARRCFNRALDADSRNVPAITAWSSMEEKLGNRQDARAIYERALPRFSAGSESKKALWRNYELMEQRAGDTAAAQRVYQR 698
BLAST of EWM28725.1 vs. NCBI_GenBank
Match: gi|1210517350|dbj|GAX23607.1| (hypothetical protein FisN_12Hh178 [Fistulifera solaris]) HSP 1 Score: 233.802 bits (595), Expect = 1.083e-61 Identity = 167/535 (31.21%), Postives = 263/535 (49.16%), Query Frame = 0
Query: 242 VRMGYREGDVAEEEGTEEAGPPLPYLPSQAEDLEAKIAEAETASNSLEILSKAVNERMLEEKFDNVR------------------APYRE-PREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWCAD----------NPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQL-LWELGRKREA-RGYFQTA-----VQSNPENEVLWHAWGVAE-RREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDR--GNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERG-------TQTNPRGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVL----LIRPEAEIYWTQYEVMERRFGHVEHAMRIEQR 726
+R+ + E + E + A L + A + +KIA A +A + +++ RM+E++ R YRE R LP D L Y AK+ ++K V EA +Y+R +E+D DGRAY+GL+R RR++ A+ + A NPF+LQA G +++ G L +A L+ +A+R P H+A W+ AQ+ +LG+ A R F+ A P++ ++ AW E ++ G+ A+KLL+ A EI+P+ S W ++E +L+N D A + ++N L +S QA+A +E R GN A LF + P D G Q Y L + + G++ +A E+ +G + D H P++QA G+L G + AR+IF++G T G + +W AW V+E + GN ARR F +AL+ SR+VP + A + +EE GN + R +YER L + W YE+ME+R G A R+ QR
Sbjct: 170 LRLMWSEPTIKTRETSSSALTSLANETATAALISSKIANATSAR-----IDRSLT-RMVEDRIYGFRRGASGDIRYQTSLMGDGAVQYREGVRLGNALPINADRLNYMAKKEMKKGRVEEAEELYERAVEIDPRDGRAYLGLSRCAQRRQDFKLAREWLNLGIANSASTFNGNPDRGANPFLLQALGCLEEKAGQLSQAESLYASAVRSRPSHAAGWVALAQIRTRKLGQSVGAGRSCFEAAERELKASGLPQSSHVYTAWADLELKKAGDPRRAKKLLKLALEIDPKCSVGWLQLGMLESDLQNWDKAEECFENVLTFDQRNSRVLQAYAIMETKRPDGNSRKAIGLFERALKANPRDAGVLQAYGLYVAKLGDIKSARELLWRGTEVDKRHAPIWQALGVLETRSGNPEEARNIFQQGIWSCAQLTGCKSGGHNCARLWQAWGVLEAEEGNHAAARRCFNRALDADSRNVPAITAWSSMEEKLGNRQDARAIYERALPRFSAGSESKKALWRNYELMEQRAGDTAAAQRVYQR 698
BLAST of EWM28725.1 vs. NCBI_GenBank
Match: gi|219111917|ref|XP_002177710.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410595|gb|EEC50524.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 228.794 bits (582), Expect = 5.552e-59 Identity = 154/446 (34.53%), Postives = 228/446 (51.12%), Query Frame = 0
Query: 315 REPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQ-----------AVYEEALRWCAD---NPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQL-LWELGRKREA-RGYFQTAVQ-----SNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDR--GNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERG-------TQTNPRGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVLLIRP----EAEIYWTQYEVMERRFGHVEHAMRIEQR 726
R PL D L Y AK+ L+ V EA +Y +++D DGRAY+G++R RRR+ A+ +V E ++ AD NPF+LQA G ++ +G L +A L+ AA + P H+AAW+ QL + +LG+ A R FQ+A + S P + ++ AW E + AR+L + A +++PR+S W VME + EN + A ++ ALK +S QA+A +E R GN A L + P D G Q YAL + E G++ AA ++ ++G + + H P++QA+ +L G ARSIF+ G T G +W AW V+E + G+ ARR F +AL+ SR+V + A A +EE GNV R +YER L + E W YE+ME+R GHV A + QR
Sbjct: 443 RLSNPLRVNADRLNYLAKKELQHGRVEEAQELYTIALQIDPRDGRAYLGMSRCASRRRDFKLAKVWLQTGISNAVSVNENTMQ--ADRGANPFLLQALGCLEENSGRLSEAEALYIAAAKSRPTHAAAWVSLGQLRIRKLGQSANAGRVCFQSAEREWQRASLPPSAHVYTAWAALECEANDIRRARQLYKAALDVDPRSSVAWLQLGVMEADEENWNEAETCFETALKFDRRNSRLLQAYALMETKRPNGNSRKAIGLLERALKANPRDAGVLQAYALYVAELGDVDAARDLLRRGAEANKRHAPVWQAWAVLETRHGNVQEARSIFQEGIWACAQLTGGQSGGYRCARLWQAWGVLEAREGDAAAARRCFSRALDADSRNVAAVTAWALMEEEFGNVRDARAIYERSLRLFAAGSGEKTSIWRNYELMEQRLGHVAAAQNVYQR 886
BLAST of EWM28725.1 vs. NCBI_GenBank
Match: gi|566190982|ref|XP_002316041.2| (hypothetical protein POPTR_0010s15510g [Populus trichocarpa] >gi|550329874|gb|EEF02212.2| hypothetical protein POPTR_0010s15510g [Populus trichocarpa]) HSP 1 Score: 211.075 bits (536), Expect = 1.810e-54 Identity = 143/474 (30.17%), Postives = 228/474 (48.10%), Query Frame = 0
Query: 314 PREPKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWC-ADNPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVLLIRPEA--EIYWTQ--YEVMERRFGHVEHAMRIEQR---------RHLAFGGKSGGGPHGGGGGTRDAKQGGRGVEGYDKGSRMMGL-FDSF 772
P+E KPL LDL Y AK R+ EA I Q+C+ DG+ Y+ L RI G++ AA+AVYE+ + +NP+V Q + V + + GN+R+A ELFDAA +H AAW G A L + G ++AR ++ NE ++ + E + + A+ L R+AT+ NP++ W AWA +E + EN +A L++ A++A P + + W E + GN E A L G A P D Q AL A +F+K + DP H P++ A+G + + G AR ++++ N AW V+E+++GN ARR FR +L S+S T + AQLE+ +GN E+ R E ++ W ++++ ++ + ++Q R+++ G + G + G + ++ G DK R GL DSF
Sbjct: 149 PQE-KPLVVNLDLALYKAKVLARRFKYKEAEEILQKCISYWPEDGKPYVALGRILGKQSKSEAARAVYEKGCQATQGENPYVWQCWAVLENKMGNIRRARELFDAATVADKRHVAAWHGWAILELKQGNVKKARQLLAKGLKFCGGNEYVYQTLALLEAKANRYKQAQYLFRQATKCNPKSCASWLAWAQLETQQENNLVARKLFEKAVQASPKNRFAWHVWGVFEANIGNIEKARKLLTIGHALNPRDAVLLQSLALLEYRHSTANLARVLFRKASELDPRHQPVWIAWGWMEWKEGNISTARELYQKALSINTTTESAARCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSYVTWMTWAQLEDDQGNSVRAEEIRNLYFQQRTEVVDDVPWVAGFLDILDPAVDSIKKLLNMDQDPYKKAQEALRNISRGKEKGVDDNSAGNPSSNS-------FGNDKEGRGSGLDLDSF 614
BLAST of EWM28725.1 vs. NCBI_GenBank
Match: gi|971514849|dbj|GAQ83365.1| (psbB mRNA maturation factor Mbb1 [Klebsormidium nitens]) HSP 1 Score: 213.772 bits (543), Expect = 5.908e-54 Identity = 135/397 (34.01%), Postives = 204/397 (51.39%), Query Frame = 0
Query: 317 PKPLPYQLDLLTYYAKEALRKRNVPEAARIYQRCMELDRYDGRAYIGLARIEGRRRNGTAAQAVYEEALRWC-ADNPFVLQAYGVFQQRNGNLRKAMELFDAAIRHGPKHSAAWLGKAQLLWELGRKREARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKATEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNP-RGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVLLIRPEAEIYWTQYEVME 711
PK L LDL Y A+ + KR +A I+ +C++ DGRAY LA++ RR A+ +YE A +N +V Q Y V ++R GNL KA +LFDAA+ +H+AAW G +L G +A+ F +++ P N L + E+ GN AR+ K T PR++ W AWA++E E N A +L+Q A + P S Y AWA E + G + A LF +G+A RP D Q +A L + G++ A +F++ DP H P +QA+ ++ + G AR +F++G P V ++ AW V+EE+ GN +AR ++ AL+ SV T + A LEE GN+ EL R L ++ + E+ + E
Sbjct: 531 PKKLKINLDLDLYRARNLVFKRQFTQAENIFYKCIKDFPEDGRAYCQLAKLLERRGELDTAREMYESAEAAAKGENAYVWQMYAVLEERAGNLSKARKLFDAALVVDKEHAAAWHGWGKLEKRDGNLVKAKSLFLRGLKNCPTNAYLHQELALIEKEAGNAAQAREYFEKGTGYAPRSAALWQAWALLEAECGNAAKARELFQKAKEVSPRSGPVYLAWALFEAECGETKAALELFETGLAYRPRDVVLMQAFARFLYDEGDLARARLLFRRATLLDPRHQPSWQAWAIIEWKEGNVPKARELFQKGVWAAPGNNADVVKVFQAWGVLEERQGNLTVARELYKCALKADPTSVLTWESWALLEEHVGNIFRADEL--RRLCMQQQTEVVSVDLSLTE 925 HSP 2 Score: 120.168 bits (300), Expect = 5.565e-24 Identity = 82/284 (28.87%), Postives = 128/284 (45.07%), Query Frame = 0
Query: 444 EARGYFQTAVQSNPENEVLWHAWGVAERREGNFGVARKLLRKA-TEINPRNSFCWHAWAVMEQELENMDLAVDLYQNALKAFPNSSHTYQAWACLEKDRGNWELAFSLFRSGIAKRPWDGGAYQPYALALKERGEMTAAMEIFQKGLQEDPYHCPLYQAFGMLLAELGRTDAARSIFERGTQTNPRGRHVYYIWHAWAVMEEKSGNFELARRYFRKALERQSRSVPTLVALAQLEEMEGNVEGCRELYERVLLIRPEAEIYWTQYEVMERRFGHVEHAMRIEQR 726
+A F ++ PE+ + R G AR++ A N++ W +AV+E+ N+ A L+ AL + + W LEK GN A SLF G+ P + +Q AL KE G A E F+KG P L+QA+ +L AE G AR +F++ + +PR VY AWA+ E + G + A F L + R V + A A+ EG++ R L+ R L+ P + W + ++E + G+V A + Q+
Sbjct: 556 QAENIFYKCIKDFPEDGRAYCQLAKLLERRGELDTAREMYESAEAAAKGENAYVWQMYAVLEERAGNLSKARKLFDAALVVDKEHAAAWHGWGKLEKRDGNLVKAKSLFLRGLKNCPTNAYLHQELALIEKEAGNAAQAREYFEKGTGYAPRSAALWQAWALLEAECGNAAKARELFQKAKEVSPRSGPVYL---AWALFEAECGETKAALELFETGLAYRPRDVVLMQAFARFLYDEGDLARARLLFRRATLLDPRHQPSWQAWAIIEWKEGNVPKARELFQK 836 The following BLAST results are available for this feature:
BLAST of EWM28725.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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