EWM28733.1, cds1853 (CDS) Nannochloropsis gaditana

Overview
NameEWM28733.1
Unique Namecds1853
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:307849..308520 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28733.1
Productuncharacterized protein
Orig transcript idgnl|cribi|Naga_100002g170.4852.mrna
GbkeyCDS
Noteencoded by transcript variant 5; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:307849..308520 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0018024histone-lysine N-methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0016043cellular component organization
Vocabulary: INTERPRO
TermDefinition
IPR013110DOT1_dom_Pfam
IPR029063SAM-dependent_MTases
Homology
[Close]
BLAST of EWM28733.1 vs. NCBI_GenBank
Match: gi|585111152|gb|EWM28729.1| (uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana])

HSP 1 Score: 454.521 bits (1168), Expect = 1.538e-161
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 
Query:    1 METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 223
            METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA
Sbjct:    8 METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 230
[Close]
BLAST of EWM28733.1 vs. NCBI_GenBank
Match: gi|585111156|gb|EWM28733.1| (uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana])

HSP 1 Score: 453.751 bits (1166), Expect = 2.380e-161
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 
Query:    1 METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 223
            METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA
Sbjct:    1 METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 223
[Close]
BLAST of EWM28733.1 vs. NCBI_GenBank
Match: gi|585111153|gb|EWM28730.1| (uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana] >gi|585111154|gb|EWM28731.1| uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana] >gi|585111155|gb|EWM28732.1| uncharacterized protein Naga_100002g170 [Nannochloropsis gaditana])

HSP 1 Score: 455.292 bits (1170), Expect = 5.543e-161
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 
Query:    1 METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 223
            METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA
Sbjct:   64 METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 286
[Close]
BLAST of EWM28733.1 vs. NCBI_GenBank
Match: gi|553188488|ref|XP_005854807.1| (hypothetical protein NGA_2076020 [Nannochloropsis gaditana CCMP526] >gi|553192876|ref|XP_005855662.1| hypothetical protein NGA_2076010 [Nannochloropsis gaditana CCMP526] >gi|422293399|gb|EKU20699.1| hypothetical protein NGA_2076010 [Nannochloropsis gaditana CCMP526] >gi|422294253|gb|EKU21553.1| hypothetical protein NGA_2076020 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 453.751 bits (1166), Expect = 2.256e-160
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0 
Query:    1 METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 223
            METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVY WKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA
Sbjct:   64 METAIRIEGASRSSKFQDGLALYSRLEPCLYPSLNPALVLGHDISHHCPSLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYVWKRCIGVEIYEKRAKLAEQALQRWKSKQSSIPMLRTRVVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKILA 286
[Close]
BLAST of EWM28733.1 vs. NCBI_GenBank
Match: gi|675171489|ref|XP_008894629.1| (hypothetical protein PPTG_03698 [Phytophthora parasitica INRA-310] >gi|566018021|gb|ETI40932.1| hypothetical protein F443_13770 [Phytophthora parasitica P1569] >gi|567955400|gb|ETK81033.1| hypothetical protein L915_13423 [Phytophthora parasitica] >gi|567984082|gb|ETL34459.1| hypothetical protein L916_13311 [Phytophthora parasitica] >gi|568013552|gb|ETL87729.1| hypothetical protein L917_13130 [Phytophthora parasitica] >gi|568043683|gb|ETM40957.1| hypothetical protein L914_13218 [Phytophthora parasitica] >gi|568106136|gb|ETN20772.1| hypothetical protein PPTG_03698 [Phytophthora parasitica INRA-310] >gi|570321686|gb|ETO69634.1| hypothetical protein F444_13825 [Phytophthora parasitica P1976] >gi|570945465|gb|ETP10722.1| hypothetical protein F441_13696 [Phytophthora parasitica CJ01A1] >gi|570977228|gb|ETP38880.1| hypothetical protein F442_13620 [Phytophthora parasitica P10297])

HSP 1 Score: 93.2041 bits (230), Expect = 1.025e-19
Identity = 56/178 (31.46%), Postives = 98/178 (55.06%), Query Frame = 0 
Query:   50 SLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSK-QSSIPMLRTRV-VDFACDDIV---EIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKIL 222
            SL+YGE+  ET+     L+     +  +  G+  DIGSG GK +  AA ++ + +C G+E+ +    +A + L RW+ +   S+P  +  V V F   D V   +I  +   ++   S  F+D+L+++I+   D  AVG+  + +TK LP  +W+ +H+ +    WGRA +I+QKK+ 
Sbjct:   54 SLVYGEIPFETVDAIFQLMRMQFGVLLDKGGNFYDIGSGCGKVVMAAALLHDFSKCCGIEVLDGLHAVALKVLDRWRFEILDSLPATKADVDVGFVKGDAVKRPDIWRDA-TLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLPSTRWQAMHEEKFHMSWGRATVIVQKKMF 230
[Close]
BLAST of EWM28733.1 vs. NCBI_GenBank
Match: gi|695452341|ref|XP_009535944.1| (hypothetical protein PHYSODRAFT_525142 [Phytophthora sojae] >gi|348669488|gb|EGZ09311.1| hypothetical protein PHYSODRAFT_525142 [Phytophthora sojae])

HSP 1 Score: 86.2705 bits (212), Expect = 5.521e-17
Identity = 57/190 (30.00%), Postives = 99/190 (52.11%), Query Frame = 0 
Query:   50 SLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGK------------QIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQ-SSIPMLRTRV-VDFACDDIV---EIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKIL 222
            SL+YGE+  ET+     L+     +  +  G+  DIGSG GK            Q+  AA ++ + +C G+E+ +    +A + L RW+ +   S+P  +  + + FA  D V   +I  +   ++   S  F+D+L+++I+   D  AVG+  + +TK L   +W+ VH+ +    WGRA +IIQKK+ 
Sbjct:   54 SLVYGEIPFETVDAIFQLMRTQFGVLLDKGGNFYDIGSGCGKVVRAGNVLTVEWQVMAAALLHDFSKCCGIEVLDGLHAVALKVLDRWRYQMLDSLPATKADLDLGFAKADAVKRPDIWRDA-TLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLQSTRWQAVHEEKFHMSWGRATVIIQKKMF 242
[Close]
BLAST of EWM28733.1 vs. NCBI_GenBank
Match: gi|301109122|ref|XP_002903642.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262097366|gb|EEY55418.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 85.1149 bits (209), Expect = 1.886e-16
Identity = 57/188 (30.32%), Postives = 97/188 (51.60%), Query Frame = 0 
Query:   50 SLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGK----------QIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQ-SSIPMLRTRV-VDFACDDIV---EIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKIL 222
            SL+YGE+  ET+     L+     +  +  GS  DIGSG GK          ++  AA ++ + +C GVE+ +    +A + L RW+ +   S+P  +  V V F   D V   +I  +   ++   S  F+D+L+++I+   D  AVG+  + +TK L   +W+ +H+ +    WGRA +I QKK+ 
Sbjct:   54 SLVYGEIPFETVDAIFQLMRTQFGVLLDKGGSFYDIGSGCGKVVRVGYWFAGEVMAAALLHDFSKCCGVEVLDGLHAVALKVLDRWRFEMLDSLPATKVDVDVGFVKGDAVKRPDIWRDA-TLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLLSTRWQAMHEEKFHMSWGRATVIFQKKMF 240
[Close]
BLAST of EWM28733.1 vs. NCBI_GenBank
Match: gi|1214673630|gb|OWY96345.1| (hypothetical protein PHMEG_00033409 [Phytophthora megakarya])

HSP 1 Score: 83.1889 bits (204), Expect = 8.858e-16
Identity = 55/190 (28.95%), Postives = 97/190 (51.05%), Query Frame = 0 
Query:   50 SLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGK------------QIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQ-SSIPMLRTRV-VDFACDDIV---EIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKKIL 222
            SL+YGE+  ET+     L+     +  +  G   DIGSG GK            ++  AA ++ + +C G+E+ +     A + L RW+ +    +P  +  V V FA +D V   +I  +   ++   S  F+D+L+++I+   D  AVG+  + +TK L   +W+ +H+ +    WGRA +I+QKK+ 
Sbjct:   53 SLVYGEIPFETVDAIFQLMRTQFGVLLDKGGRFYDIGSGCGKVVGAGALAVTRYEVMAAALLHDFSKCCGIEVLDGLHAAAMKVLDRWRYEMLDELPATKVDVEVGFAKEDAVKRPDIWRDA-TLVFCNSTCFSDSLIQAISTEADQLAVGSYFVTVTKPLQSTRWQAMHEEKFHMSWGRATVIVQKKMF 241
[Close]
BLAST of EWM28733.1 vs. NCBI_GenBank
Match: gi|299117037|emb|CBN73808.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 80.4925 bits (197), Expect = 1.613e-14
Identity = 47/161 (29.19%), Postives = 81/161 (50.31%), Query Frame = 0 
Query:   50 SLMYGELSGETLVKALGLI-DELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSK-QSSIPMLRTR----VVDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKS 204
            +L YGE+S       L  + D    LP E +G   D+G G GK +F AA ++ W RCIG+EI      +  +AL+RW+   +  + +  T+     ++F C D   ++     V+   S  F D LM+ +A+   +   G + + +T  +P P +EV+ ++
Sbjct:   98 ALTYGEVSATGFSDILAKVQDSYGGLP-EKDGVFYDLGCGTGKPVFAAATMHPWHRCIGMEILGDLHGICLKALERWEGGLRHKVTVGETKGGAAEIEFVCGDFTVLDWSDGDVVFANSTCFGDDLMKKLAQGAAALKEGAIVVTMTDPVPSPAFEVLEET 257
[Close]
BLAST of EWM28733.1 vs. NCBI_GenBank
Match: gi|1208984437|ref|WP_088245087.1| (hypothetical protein [Chlamydiales bacterium SCGC AG-110-M15] >gi|1206876409|emb|SCC90909.1| Uncharacterized protein SCG7109_BF_00050 [Chlamydiales bacterium SCGC AG-110-M15])

HSP 1 Score: 75.485 bits (184), Expect = 3.535e-13
Identity = 45/173 (26.01%), Postives = 88/173 (50.87%), Query Frame = 0 
Query:   50 SLMYGELSGETLVKALGLIDELEALPREGEGSLIDIGSGIGKQIFTAACVYAWKRCIGVEIYEKRAKLAEQALQRWKSKQ-SSIPMLRTRV-VDFACDDIVEIEMEGFQVILLVSAAFTDTLMRSIAKVLDSQAVGTLAICITKALPGPKWEVVHKSEREEPWGRAWLIIQKK 220
            + +YGE    ++ K   ++D     P+  E   +D+G+G+GKQ+ TAA +Y +K+  G+EI     K ++  L++++ K  S +P  +    +DF   + +  +     V  + S  +++ +M  IA+  +    G+  + +TK LP  ++E +H       WG + + I KK
Sbjct:   39 TYVYGEAELHSIEKIFQIVD-----PQPDE-VFVDLGAGVGKQVLTAALLYDFKKVRGIEILSDLHKTSKDILEQFRKKYGSKLPDGKEMPDIDFLKGNFLRADFSEADVAYMCSTCYSEEMMEGIARGAEHMKPGSRVVTLTKPLPSDQYEEIHHEFYPMSWGTSQVFIYKK 205
The following BLAST results are available for this feature:
BLAST of EWM28733.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111152|gb|EWM28729.1|1.538e-161100.00uncharacterized protein Naga_100002g170 [Nannochlo... [more]
gi|585111156|gb|EWM28733.1|2.380e-161100.00uncharacterized protein Naga_100002g170 [Nannochlo... [more]
gi|585111153|gb|EWM28730.1|5.543e-161100.00uncharacterized protein Naga_100002g170 [Nannochlo... [more]
gi|553188488|ref|XP_005854807.1|2.256e-16099.55hypothetical protein NGA_2076020 [Nannochloropsis ... [more]
gi|675171489|ref|XP_008894629.1|1.025e-1931.46hypothetical protein PPTG_03698 [Phytophthora para... [more]
gi|695452341|ref|XP_009535944.1|5.521e-1730.00hypothetical protein PHYSODRAFT_525142 [Phytophtho... [more]
gi|301109122|ref|XP_002903642.1|1.886e-1630.32conserved hypothetical protein [Phytophthora infes... [more]
gi|1214673630|gb|OWY96345.1|8.858e-1628.95hypothetical protein PHMEG_00033409 [Phytophthora ... [more]
gi|299117037|emb|CBN73808.1|1.613e-1429.19conserved unknown protein [Ectocarpus siliculosus][more]
gi|1208984437|ref|WP_088245087.1|3.535e-1326.01hypothetical protein [Chlamydiales bacterium SCGC ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1858rna1858Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications