EWM28834.1, cds1841 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM28834.1
Unique Name	cds1841
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002458.1:288141..288178 -
Alignment location	CM002458.1:288004..288046 -
Alignment location	CM002458.1:287638..287694 -
Alignment location	CM002458.1:287212..287440 -
Alignment location	CM002458.1:286729..286824 -
Alignment location	CM002458.1:286272..286501 -
Alignment location	CM002458.1:285969..286108 -
Alignment location	CM002458.1:285494..285740 -

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM28834.1
Product	p-loop containing nucleoside triphosphate hydrolase-like protein
Orig transcript id	gnl\|cribi\|Naga_100199g2.9704.mrna
Gene	DRG2
Gbkey	CDS
Note	encoded by transcript variant 1; alternatively spliced

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002458.1	supercontig	CM002458.1:288141..288178 -
CM002458.1	supercontig	CM002458.1:288004..288046 -
CM002458.1	supercontig	CM002458.1:287638..287694 -
CM002458.1	supercontig	CM002458.1:287212..287440 -
CM002458.1	supercontig	CM002458.1:286729..286824 -
CM002458.1	supercontig	CM002458.1:286272..286501 -
CM002458.1	supercontig	CM002458.1:285969..286108 -
CM002458.1	supercontig	CM002458.1:285494..285740 -

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity
GO:0000166	nucleotide binding
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR031167	G_OBG
IPR006074	GTP1-OBG_CS
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR006073	GTP_binding_domain

Homology

[Close]

BLAST of EWM28834.1 vs. NCBI_GenBank
Match: gi|585111258|gb|EWM28834.1| (p-loop containing nucleoside triphosphate hydrolase-like protein [Nannochloropsis gaditana] >gi|585111259|gb|EWM28835.1| p-loop containing nucleoside triphosphate hydrolase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 736.102 bits (1899), Expect = 0.000e+0
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0

Query:    1 MLASSWPSASLTKYCKARLCFGLLHVSASGRILSTMGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRHKLNLEVSPRKRREKGPPWGSSAPFFPHFLPESFDLPSSSRLPAPP 359
            MLASSWPSASLTKYCKARLCFGLLHVSASGRILSTMGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRHKLNLEVSPRKRREKGPPWGSSAPFFPHFLPESFDLPSSSRLPAPP
Sbjct:    1 MLASSWPSASLTKYCKARLCFGLLHVSASGRILSTMGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRHKLNLEVSPRKRREKGPPWGSSAPFFPHFLPESFDLPSSSRLPAPP 359

[Close]

BLAST of EWM28834.1 vs. NCBI_GenBank
Match: gi|553190615|ref|XP_005855227.1| (developmentally regulated g-protein 1 [Nannochloropsis gaditana CCMP526] >gi|422293829|gb|EKU21129.1| developmentally regulated g-protein 1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 575.474 bits (1482), Expect = 0.000e+0
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0

Query:   36 MGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRHKLNLE 319
            MGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRHKLNLE
Sbjct:    1 MGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRHKLNLE 284

[Close]

BLAST of EWM28834.1 vs. NCBI_GenBank
Match: gi|813192380|ref|XP_012208072.1| (hypothetical protein SPRG_13739 [Saprolegnia parasitica CBS 223.65] >gi|813226683|ref|XP_012212418.1| hypothetical protein SPRG_17648 [Saprolegnia parasitica CBS 223.65] >gi|641521012|gb|KDO16873.1| hypothetical protein SPRG_17648 [Saprolegnia parasitica CBS 223.65] >gi|641526914|gb|KDO21240.1| hypothetical protein SPRG_13739 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 428.328 bits (1100), Expect = 3.511e-146
Identity = 203/279 (72.76%), Postives = 240/279 (86.02%), Query Frame = 0

Query:   36 MGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRH 314
            MGI+D+IKEIE+EM RTQKNKATE HLG LKA+LAKLR+ELL   G K  GG G GF+VARSGDGRVALIGFPSVGKS+LL+ LTDTES+  A EFTTLTCIPGN++YND +IQLLDLPGIIEGAAHGKGRG+EVIAV++S+D++LMVLD G+E+ N HRAILE ELETVGLRLN+ PP+IYFRKK  GG+ FN+TV LT++G DP  TV +IL+EY+IHNCE+L RED S D +IDVIEGNRKY++CLY YNKID I+IEDVDRLAR P ++VI+  H
Sbjct:    1 MGILDKIKEIEDEMKRTQKNKATEGHLGHLKAKLAKLRTELL--EGDKSSGGGGEGFDVARSGDGRVALIGFPSVGKSTLLSQLTDTESETNAVEFTTLTCIPGNLMYNDVRIQLLDLPGIIEGAAHGKGRGREVIAVSKSADMILMVLDAGREEGNRHRAILENELETVGLRLNRNPPDIYFRKKAGGGISFNATVRLTRMGDDPYKTVYKILHEYRIHNCELLFREDASVDDLIDVIEGNRKYIKCLYVYNKIDVISIEDVDRLARNPHSVVIACEH 277

[Close]

BLAST of EWM28834.1 vs. NCBI_GenBank
Match: gi|669137080|ref|XP_008604108.1| (hypothetical protein SDRG_00413 [Saprolegnia diclina VS20] >gi|530744443|gb|EQC42685.1| hypothetical protein SDRG_00413 [Saprolegnia diclina VS20])

HSP 1 Score: 427.172 bits (1097), Expect = 7.791e-146
Identity = 202/279 (72.40%), Postives = 240/279 (86.02%), Query Frame = 0

Query:   36 MGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRH 314
            MGI+D+IKEIE+EM RTQKNKATE HLG LKA+LAKLR+ELL   G K  GG G GF+VARSGDGRVALIGFPSVGKS+LL+ LTDTES+  + EFTTLTCIPGN++YND +IQLLDLPGIIEGAAHGKGRG+EVIAV++S+D++LMVLD G+E+ N HRAILE ELETVGLRLN+ PP+IYFRKK  GG+ FN+TV LT++G DP  TV +IL+EY+IHNCE+L RED S D +IDVIEGNRKY++CLY YNKID I+IEDVDRLAR P ++VI+  H
Sbjct:    1 MGILDKIKEIEDEMKRTQKNKATEGHLGHLKAKLAKLRTELL--EGDKSSGGGGEGFDVARSGDGRVALIGFPSVGKSTLLSQLTDTESETNSVEFTTLTCIPGNLMYNDVRIQLLDLPGIIEGAAHGKGRGREVIAVSKSADMILMVLDAGREEGNRHRAILENELETVGLRLNRNPPDIYFRKKAGGGISFNATVRLTRMGDDPYKTVYKILHEYRIHNCELLFREDASVDDLIDVIEGNRKYIKCLYVYNKIDVISIEDVDRLARNPHSVVIACEH 277

[Close]

BLAST of EWM28834.1 vs. NCBI_GenBank
Match: gi|1173945975|gb|OQR94551.1| (GTPase [Achlya hypogyna])

HSP 1 Score: 426.017 bits (1094), Expect = 2.222e-145
Identity = 201/279 (72.04%), Postives = 240/279 (86.02%), Query Frame = 0

Query:   36 MGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRH 314
            MGI+D+IKEIE+EM RTQKNKATE HLG LKA+LAKLR+ELL   G K  GG G GF+VARSGDGRVALIGFPSVGKS+LL+ LTDTES+  + EFTTLTCIPGN++YND +IQLLDLPGIIEGAAHGKGRG+EVIAV++S+D++LMVLD G+E+ N HRAILE ELETVGLRLN+ PP+IYFRKK  GG+ FN+TV LT+LG DP  TV +IL+EY+IHNCE+L RED + D +ID+IEGNRKY++CLY YNKID I+IEDVDRLAR P ++VI+  H
Sbjct:    1 MGILDKIKEIEDEMKRTQKNKATEGHLGHLKAKLAKLRTELL--EGDKSSGGGGEGFDVARSGDGRVALIGFPSVGKSTLLSQLTDTESETNSVEFTTLTCIPGNLMYNDVRIQLLDLPGIIEGAAHGKGRGREVIAVSKSADMILMVLDAGREEGNRHRAILENELETVGLRLNRNPPDIYFRKKAGGGISFNATVRLTKLGDDPYKTVYKILHEYRIHNCELLFREDATVDDLIDIIEGNRKYIKCLYVYNKIDVISIEDVDRLARNPHSVVIACEH 277

[Close]

BLAST of EWM28834.1 vs. NCBI_GenBank
Match: gi|299469639|emb|CBN76493.1| (DRG2, developmentally regulated GTPase 2 [Ectocarpus siliculosus])

HSP 1 Score: 421.394 bits (1082), Expect = 1.496e-143
Identity = 214/284 (75.35%), Postives = 249/284 (87.68%), Query Frame = 0

Query:   36 MGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRHKLNLE 319
            MGI++RIKEIE+EM +TQ+NKATE HLG LKARLAKLRSELL  +   G    G GF+VARSGDGRVA+IGFPSVGKSSLL+ LT+TES AA YEFTTLTCIPGN+ YNDT+IQLLDLPGIIEGAA+GKGRG+EVIAVARSSDL+LMVLDG KE VN HR ILERELETVGLRLNK PPN+Y+R KKDGGVKFNST+ LT+LG DP  TV R+L EYKIHNCE+L+REDV+ D ++DV++GNRKYV+CLY YNK+D I+IED+D+LAREP++IV+SV  KLNLE
Sbjct:    1 MGILERIKEIEQEMDKTQRNKATEGHLGMLKARLAKLRSELLTPSSGGG---GGQGFDVARSGDGRVAMIGFPSVGKSSLLSELTETESVAAGYEFTTLTCIPGNVYYNDTRIQLLDLPGIIEGAAYGKGRGREVIAVARSSDLILMVLDGAKEGVNQHRQILERELETVGLRLNKTPPNVYYRLKKDGGVKFNSTIALTKLGDDPGATVKRVLSEYKIHNCEVLVREDVTVDDIVDVVQGNRKYVKCLYVYNKVDMISIEDMDKLAREPNSIVVSVHMKLNLE 281

[Close]

BLAST of EWM28834.1 vs. NCBI_GenBank
Match: gi|1032151709|gb|OAO15245.1| (GTPase [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 421.394 bits (1082), Expect = 1.886e-143
Identity = 201/284 (70.77%), Postives = 239/284 (84.15%), Query Frame = 0

Query:   36 MGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRHKLNLE 319
            MGI+++IKEIE EMARTQKNKATE H G +KARLAKLRSELL  TG  G    G GF+VAR GD RVALIGFPSVGKSSLLN LTDT+S+ AAYEFTTLTCIPGNI Y   +IQ+LDLPGIIEGAA+G+GRG++VIAVA+S+DL+LMVLD GKE+  NHR ILERELETVGLRLNK+PP IYF+ K  GG+KFN+TVPLT+LG DP  TV +IL+EY+IHN E++ R+D   D++IDV+EGNRKYV+CLY YNKIDT++IEDVDRLAR P + V S+R  LN++
Sbjct:    1 MGIIEKIKEIEAEMARTQKNKATEFHFGVMKARLAKLRSELLEPTGGSGGASKGDGFDVARVGDARVALIGFPSVGKSSLLNHLTDTKSEEAAYEFTTLTCIPGNIYYKGCRIQMLDLPGIIEGAAYGRGRGRQVIAVAKSADLILMVLDAGKEEEKNHREILERELETVGLRLNKEPPRIYFKVKNAGGIKFNATVPLTRLGDDPYDTVYKILHEYRIHNAEVIFRDDYGVDELIDVVEGNRKYVKCLYVYNKIDTVSIEDVDRLARLPYSTVCSIRMNLNVD 284

[Close]

BLAST of EWM28834.1 vs. NCBI_GenBank
Match: gi|635372116|emb|CCI39724.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 415.616 bits (1067), Expect = 3.727e-141
Identity = 205/279 (73.48%), Postives = 241/279 (86.38%), Query Frame = 0

Query:   36 MGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRH 314
            MGIVDRIKEIE+EM RTQKNKATE HLG+LKA+LAKLR+ELL    S G    G GF+VA+SGDGRVALIGFPSVGKS+LL+ LT+TES+ +A EFTTLTCIPGN+IYND +IQLLDLPGIIEGAAHGKGRG+EVIAVA+S+D++LMVLD G+E  N HR ILE ELETVGLRLN++PP+IYFRKK  GGV FNST+ LT+LG DP  TV +IL+EYK+HNCE+L RED +TD +IDVIEGNRKYV+CLY YNKID I+IEDVDRLAR+P++ VI+  H
Sbjct:    1 MGIVDRIKEIEDEMKRTQKNKATEGHLGSLKAKLAKLRTELLEGEKSSGG--GGEGFDVAKSGDGRVALIGFPSVGKSTLLSQLTETESETSAVEFTTLTCIPGNLIYNDVRIQLLDLPGIIEGAAHGKGRGREVIAVAKSADMILMVLDAGQEAGNRHREILENELETVGLRLNRRPPDIYFRKKSGGGVTFNSTLRLTKLGDDPYKTVYKILHEYKLHNCEVLFREDATTDDLIDVIEGNRKYVKCLYVYNKIDVISIEDVDRLARKPNSTVIACAH 277

[Close]

BLAST of EWM28834.1 vs. NCBI_GenBank
Match: gi|1173958444|gb|OQS04802.1| (GTPase [Thraustotheca clavata])

HSP 1 Score: 413.69 bits (1062), Expect = 2.154e-140
Identity = 201/279 (72.04%), Postives = 239/279 (85.66%), Query Frame = 0

Query:   36 MGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRH 314
            MGI+D+IKEIE+EM RTQKNKATE HLG LKA+LAKLR+ELL   G K  GG G GF+VARSGDGRVALIGFPSVGKS+LL+ LTDTES+  + EFTTLTCIPGN++YND +IQLLDLPGIIEGAAHGKGRG+EVIAV++S+D++LMVLD G+E+ N HR ILE ELETVGLRLN+ PP+IYFRKK  GG+ FN+TV LT+LG DP  TV +IL+EY+IHNCE+L RED + D +IDVIEGNRKY++CLY YNKID I+IEDVDRLAR P ++VI+  H
Sbjct:    1 MGILDKIKEIEDEMKRTQKNKATEGHLGHLKAKLAKLRTELL--EGDKSGGGGGEGFDVARSGDGRVALIGFPSVGKSTLLSQLTDTESETNSVEFTTLTCIPGNLMYNDVRIQLLDLPGIIEGAAHGKGRGREVIAVSKSADMILMVLDAGREEGNRHREILENELETVGLRLNRNPPDIYFRKKAGGGISFNATVRLTKLGDDPYKTVYKILHEYRIHNCELLFREDATVDDLIDVIEGNRKYIKCLYVYNKIDVISIEDVDRLARMPHSVVIACEH 277

[Close]

BLAST of EWM28834.1 vs. NCBI_GenBank
Match: gi|673033104|ref|XP_008870513.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574473375|gb|ETW00378.1| hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 407.142 bits (1045), Expect = 4.528e-139
Identity = 200/279 (71.68%), Postives = 241/279 (86.38%), Query Frame = 0

Query:   36 MGIVDRIKEIEEEMARTQKNKATEHHLGALKARLAKLRSELLLETGSKGPGGAGTGFEVARSGDGRVALIGFPSVGKSSLLNTLTDTESQAAAYEFTTLTCIPGNIIYNDTKIQLLDLPGIIEGAAHGKGRGKEVIAVARSSDLVLMVLDGGKEQVNNHRAILERELETVGLRLNKKPPNIYFRKKKDGGVKFNSTVPLTQLGPDPALTVGRILYEYKIHNCEMLLREDVSTDQVIDVIEGNRKYVRCLYAYNKIDTITIEDVDRLAREPDAIVISVRH 314
            MGI+D+IKEIE+EM RTQKNKATE HLG LKA+LAKLR+ELL   G K  GG G GF+VARSGDGRVALIGFPSVGKS+LL+ LTDTES+  + EFTTLTCIPGN++YND +IQLLDLPGIIEGA+HGKGRG+EVIAV++S+D++LMVLD G+E+ N HR ILE ELETVGLRLN+ PP+IYFRKK  GGV+FN+TV LT+LG DPA TV +IL+EY+IHNCE+L RED + D +IDV+EGNRKY++CLY YNKID ++IEDVDRLAR P ++VI+  H
Sbjct:    1 MGILDKIKEIEDEMKRTQKNKATEGHLGHLKAKLAKLRTELL--DGEKSSGGGGEGFDVARSGDGRVALIGFPSVGKSTLLSQLTDTESETNSVEFTTLTCIPGNLMYNDVRIQLLDLPGIIEGASHGKGRGREVIAVSKSADMILMVLDAGREEGNRHRTILENELETVGLRLNRNPPDIYFRKKAGGGVQFNATVRLTKLGDDPAKTVHKILHEYRIHNCELLFREDCTVDDLIDVLEGNRKYIKCLYVYNKIDVVSIEDVDRLARLPHSVVIACEH 277

The following BLAST results are available for this feature:

BLAST of EWM28834.1 vs. NCBI_GenBank

BLAST of EWM28834.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585111258\|gb\|EWM28834.1\|	0.000e+0	100.00	p-loop containing nucleoside triphosphate hydrolas...	[more]
gi\|553190615\|ref\|XP_005855227.1\|	0.000e+0	100.00	developmentally regulated g-protein 1 [Nannochloro...	[more]
gi\|813192380\|ref\|XP_012208072.1\|	3.511e-146	72.76	hypothetical protein SPRG_13739 [Saprolegnia paras...	[more]
gi\|669137080\|ref\|XP_008604108.1\|	7.791e-146	72.40	hypothetical protein SDRG_00413 [Saprolegnia dicli...	[more]
gi\|1173945975\|gb\|OQR94551.1\|	2.222e-145	72.04	GTPase [Achlya hypogyna]	[more]
gi\|299469639\|emb\|CBN76493.1\|	1.496e-143	75.35	DRG2, developmentally regulated GTPase 2 [Ectocarp...	[more]
gi\|1032151709\|gb\|OAO15245.1\|	1.886e-143	70.77	GTPase [Blastocystis sp. ATCC 50177/Nand II]	[more]
gi\|635372116\|emb\|CCI39724.1\|	3.727e-141	73.48	unnamed protein product [Albugo candida]	[more]
gi\|1173958444\|gb\|OQS04802.1\|	2.154e-140	72.04	GTPase [Thraustotheca clavata]	[more]
gi\|673033104\|ref\|XP_008870513.1\|	4.528e-139	71.68	hypothetical protein, variant [Aphanomyces invadan...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna1846	rna1846	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications