EWM28880.1, cds1798 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28880.1 vs. NCBI_GenBank
Match: gi|585111312|gb|EWM28880.1| (2-isopropylmalate synthase [Nannochloropsis gaditana]) HSP 1 Score: 2926.73 bits (7586), Expect = 0.000e+0 Identity = 1417/1417 (100.00%), Postives = 1417/1417 (100.00%), Query Frame = 0 Query: 1 MLKCTKNTSNACQIFIKTRAATRIALDRSLQEQPYLRQGRNCSAAHPSAIRAIQGERYNQNTMHPSNLQPGLASSMAISSASSHGRRRQRVAVASSLLVLAAAAVSTSTTQAFILPIPPSAKSSPSFSSSAPRFARPNAVVSGKRVLRMATTLTDASSSDVISPAELDVVRPVPTRHDRETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKNGLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSAGVLFLSTLSLGRFDLQEDRVVWQDGKECCVRRVVSSFRSSWRHTWITTLYEKAFRDYGYVKKTRARWKLPMKETIRSHPHVRGKYRDRLSMPSIDEEHAVHTALVPPTSAEVSIPSAGAASTAHPSSTEAMRSLQELEADDTEYSQTHTHPRPGHDHEKPPTAGILSFLYAFEGGDPDSEVDVVHAFQEEGGVPERKPPVFSFRTLLSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAVRLGVVTGKNLARVCKEQYNRATSMTLWILIELAIVGCDLQEIVGSAIAFQILFGFPLWLGCLITFIDTFTFLGIHYFGVRKLESVFVLLVAIMTVCFFINFGKSPPPSRDIAEGFVPQIRPYAVLSAVGLIGAVIMPHNIYLHSALVLSRKVDRRRPAHVKEANKYFAIDSAIALTVSFVINLAVVSVFAYHFFDHGCATAPGGPLACLSRTEEGVCDCQLIGLAGAHDALAEALGKSAKYIWAVGLLAAGQASTMTGTYAGQYVMEGFLDLQIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDRFQEAINVFNSVLLSFSLLPVLHFTSSSVIMGEHVSSLPLTITIWVLAFGVLAINIYLVVLRIGAGQPWWVYVVTAVVGLIYLAFSYSLVQEDIENGAWAVVEGLPVGWPLKRRLLAWRERRKVRKEGLIGGDGISNVSPKHQRLIESVGDSDGSEPEST 1417 MLKCTKNTSNACQIFIKTRAATRIALDRSLQEQPYLRQGRNCSAAHPSAIRAIQGERYNQNTMHPSNLQPGLASSMAISSASSHGRRRQRVAVASSLLVLAAAAVSTSTTQAFILPIPPSAKSSPSFSSSAPRFARPNAVVSGKRVLRMATTLTDASSSDVISPAELDVVRPVPTRHDRETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKNGLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSAGVLFLSTLSLGRFDLQEDRVVWQDGKECCVRRVVSSFRSSWRHTWITTLYEKAFRDYGYVKKTRARWKLPMKETIRSHPHVRGKYRDRLSMPSIDEEHAVHTALVPPTSAEVSIPSAGAASTAHPSSTEAMRSLQELEADDTEYSQTHTHPRPGHDHEKPPTAGILSFLYAFEGGDPDSEVDVVHAFQEEGGVPERKPPVFSFRTLLSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAVRLGVVTGKNLARVCKEQYNRATSMTLWILIELAIVGCDLQEIVGSAIAFQILFGFPLWLGCLITFIDTFTFLGIHYFGVRKLESVFVLLVAIMTVCFFINFGKSPPPSRDIAEGFVPQIRPYAVLSAVGLIGAVIMPHNIYLHSALVLSRKVDRRRPAHVKEANKYFAIDSAIALTVSFVINLAVVSVFAYHFFDHGCATAPGGPLACLSRTEEGVCDCQLIGLAGAHDALAEALGKSAKYIWAVGLLAAGQASTMTGTYAGQYVMEGFLDLQIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDRFQEAINVFNSVLLSFSLLPVLHFTSSSVIMGEHVSSLPLTITIWVLAFGVLAINIYLVVLRIGAGQPWWVYVVTAVVGLIYLAFSYSLVQEDIENGAWAVVEGLPVGWPLKRRLLAWRERRKVRKEGLIGGDGISNVSPKHQRLIESVGDSDGSEPEST Sbjct: 1 MLKCTKNTSNACQIFIKTRAATRIALDRSLQEQPYLRQGRNCSAAHPSAIRAIQGERYNQNTMHPSNLQPGLASSMAISSASSHGRRRQRVAVASSLLVLAAAAVSTSTTQAFILPIPPSAKSSPSFSSSAPRFARPNAVVSGKRVLRMATTLTDASSSDVISPAELDVVRPVPTRHDRETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKNGLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSAGVLFLSTLSLGRFDLQEDRVVWQDGKECCVRRVVSSFRSSWRHTWITTLYEKAFRDYGYVKKTRARWKLPMKETIRSHPHVRGKYRDRLSMPSIDEEHAVHTALVPPTSAEVSIPSAGAASTAHPSSTEAMRSLQELEADDTEYSQTHTHPRPGHDHEKPPTAGILSFLYAFEGGDPDSEVDVVHAFQEEGGVPERKPPVFSFRTLLSYTGPGFLMCIAYLDPGNLEADLQVGAYTGYDLLWMLALATFMGFALQCMAVRLGVVTGKNLARVCKEQYNRATSMTLWILIELAIVGCDLQEIVGSAIAFQILFGFPLWLGCLITFIDTFTFLGIHYFGVRKLESVFVLLVAIMTVCFFINFGKSPPPSRDIAEGFVPQIRPYAVLSAVGLIGAVIMPHNIYLHSALVLSRKVDRRRPAHVKEANKYFAIDSAIALTVSFVINLAVVSVFAYHFFDHGCATAPGGPLACLSRTEEGVCDCQLIGLAGAHDALAEALGKSAKYIWAVGLLAAGQASTMTGTYAGQYVMEGFLDLQIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDRFQEAINVFNSVLLSFSLLPVLHFTSSSVIMGEHVSSLPLTITIWVLAFGVLAINIYLVVLRIGAGQPWWVYVVTAVVGLIYLAFSYSLVQEDIENGAWAVVEGLPVGWPLKRRLLAWRERRKVRKEGLIGGDGISNVSPKHQRLIESVGDSDGSEPEST 1417
BLAST of EWM28880.1 vs. NCBI_GenBank
Match: gi|551636547|ref|XP_005821098.1| (2-isopropylmalate synthase [Guillardia theta CCMP2712] >gi|428165114|gb|EKX34118.1| 2-isopropylmalate synthase [Guillardia theta CCMP2712]) HSP 1 Score: 750.355 bits (1936), Expect = 0.000e+0 Identity = 391/629 (62.16%), Postives = 484/629 (76.95%), Query Frame = 0 Query: 95 SSLLVLAAAAVSTSTTQAFILPIPPSAKSSPSFSSSAPRFARPNAVVSGKRVLRMATTLTDASSSDVISPAELDVVRPV---PTRHDRETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAK-NGLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIE--------KIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSAG----VLFLSTLSLGRFDL 707 SS L+L + +S+ T +F+ P P P+ RF RP + LRM S E+++ +P+ P++HD ETGRDP RVK+FDTTLRDGEQSPGC+MT++EK+QVAKQLA++GVDVIEAGFPIAS DF AV++IA+ VGN ENPPIICGLARA + DI C +AVK A FPRIHTFIATSDIHM HKL+KSREEVL IT++MVT A+SL +DVEFSAEDALRSD AFL QV+SVA++AGATT+NVPDTVG+TTP+EFK I LR + +G+E VTISVHGHDDLGMAVANF+ AI GGARQVE T+NGIGERAGNAA+EE+VMALHVRKS+YNP FGR + ALTNI EI ++SRLV++LTGM++QPNKAIVGANAFAHESGIHQDG+LKNK TYEI+DA +IGL +G+VLGKHSGR AF++RL +LG L++ E NKAF+RFK++ADKKKEITN DLESIVN+E + A +++++ QV CG S VPTAT+TL +++D+ E+T A+TGTGPVDAA+ AV + GI+ +KL+E+ VSSVTAGIDALGEVTVRL+D SG+++ GR+A+TDVV A V L+ L L R DL Sbjct: 38 SSALLLPQSRLSS--TCSFVKPSSP-----PTARCRGMRFVRPGS-------LRM-------------SGGEMNM-KPINVKPSKHDLETGRDPTRVKVFDTTLRDGEQSPGCSMTSDEKMQVAKQLARMGVDVIEAGFPIASNDDFLAVKQIADVVGNYENPPIICGLARATEGDIRRCADAVKGARFPRIHTFIATSDIHMEHKLRKSREEVLKITKQMVTLAKSLVDDVEFSAEDALRSDRAFLAQVFSVAIKAGATTINVPDTVGFTTPTEFKETIEYLRKHTEGIEDVTISVHGHDDLGMAVANFLGAIEGGARQVEVTVNGIGERAGNAAMEEVVMALHVRKSYYNPMFGRPADSNDALTNIVLKEIHRSSRLVTSLTGMMVQPNKAIVGANAFAHESGIHQDGMLKNKLTYEIIDASTIGLDNSDGIVLGKHSGRAAFKARLADLGI-VLNEDETNKAFIRFKDLADKKKEITNADLESIVNDEAQ-DLAANRFKVMHVQVTCGISMVPTATVTLRDEKDDLELTDASTGTGPVDAAFQAVNRLCGIQGGGQANAADVKLMEYSVSSVTAGIDALGEVTVRLQDPRSGRVFLGRAADTDVVVASCVAYVNALNRLILQRSDL 636
BLAST of EWM28880.1 vs. NCBI_GenBank
Match: gi|1189389599|gb|OSX76579.1| (hypothetical protein BU14_0184s0006 [Porphyra umbilicalis]) HSP 1 Score: 744.577 bits (1921), Expect = 0.000e+0 Identity = 379/570 (66.49%), Postives = 448/570 (78.60%), Query Frame = 0 Query: 142 SGKRVLRMATTLTDASSSDV-ISPAELDVVRPVPTRHDRETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKNGLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVICGDSQVPTATITLL--------------NKEDNQEVTVAATGTGPVDAAYVAVTKALG-IEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSAGVL 695 + +R L A ++ A +SDV ++P PT+HD TGRDP RVKIFDTTLRDGEQSPG T+T EEK+ +A+QLAKLGVDVIEAGFPIAS GDF AV IAE+VGN +PPIICGLARAL DI+ CW A+K AAFPRIHTFIATSD+HM HKLKKSR EVL I + MVT+ARSLCEDVEFSAEDA+RSDP FLY+V+SVAV AGATTLNVPDTVGYTTP EF LIRG+RANV GVE VTISVHGHDDLGMAVANF++A+ GARQ+ECTINGIGERAGNAALEE+VMALHVR+++YN R GR LTNI TEI++TSRLVS+LTGM++QPNKAIVGANAF+HESGIHQDG+LKN TYEIMDA+S+GL N +VLGK SGRHAFRSRLTELGYE LSD E+N+AFVRFKE+AD KK +++ D+ESIVN+E+R DA + L R QV CG+ VPT+T+TL + EVT +ATGTGPVDA + A+ A+G + + L E+ VSSVT GIDALGEVTVR+ D ++G+ Y G S++TDVV A + Sbjct: 43 AAERPLMTAAKMSPAQASDVDVAPTAK------PTKHDLATGRDPNRVKIFDTTLRDGEQSPGATLTGEEKMIIARQLAKLGVDVIEAGFPIASVGDFRAVHAIAETVGNRPDPPIICGLARALTADIDRCWEAIKPAAFPRIHTFIATSDVHMEHKLKKSRAEVLAIAKAMVTHARSLCEDVEFSAEDAIRSDPEFLYEVFSVAVAAGATTLNVPDTVGYTTPFEFSKLIRGIRANVVGVENVTISVHGHDDLGMAVANFLSAVESGARQMECTINGIGERAGNAALEELVMALHVRRNYYNSRLGRVVGGP-PLTNINHTEIYQTSRLVSSLTGMLVQPNKAIVGANAFSHESGIHQDGVLKNPETYEIMDAKSVGLKDNSMVLGKLSGRHAFRSRLTELGYE-LSDEEINRAFVRFKELADTKKTVSSWDIESIVNDEVR-AVDAPRVALHRVQVSCGNLSVPTSTVTLSVVSGAAMPRMSGSPEPMADGEVTQSATGTGPVDATFKAINAAVGELVDVALEEYTVSSVTKGIDALGEVTVRVRDGATGRRYTGNSSDTDVVVASAM 603
BLAST of EWM28880.1 vs. NCBI_GenBank
Match: gi|546314367|ref|XP_005715553.1| (2-isopropylmalate synthase [Chondrus crispus] >gi|507112034|emb|CDF35734.1| 2-isopropylmalate synthase [Chondrus crispus]) HSP 1 Score: 743.421 bits (1918), Expect = 0.000e+0 Identity = 360/522 (68.97%), Postives = 438/522 (83.91%), Query Frame = 0 Query: 174 PTRHDRETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKNGLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKAL-GIEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSAGV 694 PT+HD TGRDP RVKIFDTTLRDGEQSPG ++TA+EK+ +A+QLAKLGVDVIEAGFPIAS GDF AVR IA+SVGN +NPPIICGLARAL+KDI C+ AVK+AAFPRIHTFIATSD+HM +KLKK+REEV+ IT+E VTYARSLCEDVEFSAEDA+RSDP FL +V+S A+EAGATT+NVPDTVGYTTPSEF +LIR LR NV+G++ VTISVHGHDDLGMAVANF++A+ GARQ+ECTINGIGERAGNA+LEE+VMALHVR+ FYN R G+ + + LTNI EI TSR+VS LTGM++QPNKAIVGANAFAHESGIHQDG+LK++ TYEIMDA+SIGL++N +VLGKHSGRHAFR+RL +GYE ++D EL +AF RFKE+AD KKE++ DL+S+VN+E+RL +A K L R Q+ CG +PTATI L+ +D+ E TV +TGTGPVD+AY A+ + + I + LLE+ VSSV+ GIDALGEV VR++D ++G Y G +ANTD+V A V Sbjct: 18 PTKHDIATGRDPDRVKIFDTTLRDGEQSPGASLTADEKMVIARQLAKLGVDVIEAGFPIASEGDFTAVREIAKSVGNRDNPPIICGLARALEKDISRCYEAVKHAAFPRIHTFIATSDLHMAYKLKKTREEVVEITKETVTYARSLCEDVEFSAEDAIRSDPDFLCEVFSAAIEAGATTINVPDTVGYTTPSEFASLIRYLRRNVRGIDDVTISVHGHDDLGMAVANFLSAVENGARQMECTINGIGERAGNASLEEVVMALHVRRQFYNARMGKDNKVDAPLTNIVHKEIHHTSRMVSNLTGMLVQPNKAIVGANAFAHESGIHQDGVLKHRQTYEIMDAQSIGLSENSIVLGKHSGRHAFRTRLVNMGYE-VTDEELERAFRRFKELADIKKEVSEADLQSLVNDEVRLVKEAVK--LTRIQIQCGYHIIPTATIGLILVDDDAEKTVTSTGTGPVDSAYNAINQVIEDIIHVTLLEYKVSSVSKGIDALGEVAVRVQDGATGNQYIGAAANTDIVVASV 536
BLAST of EWM28880.1 vs. NCBI_GenBank
Match: gi|545703726|ref|XP_005704188.1| (2-isopropylmalate synthase [Galdieria sulphuraria] >gi|452820628|gb|EME27668.1| 2-isopropylmalate synthase [Galdieria sulphuraria]) HSP 1 Score: 724.161 bits (1868), Expect = 0.000e+0 Identity = 350/522 (67.05%), Postives = 427/522 (81.80%), Query Frame = 0 Query: 174 PTRHDRETGRDPMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKNGLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRL-GYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSAGV 694 PT+HD TGRDP RVK FDTTLRDGEQSPG T+T EEKL +A+QLAKLGVD+IEAGFP+AS GDF+AVR IA +VG ENPPIICGLARA++ DI CW AVK AAF RIHTFIATSDIHM HKLKKSR +VL V YA+SLCED+EFSAEDA RSDP FLY+V+S A+EAGATT+NVPDTVGYTTP+EF +L+RG+R NV+G+E V +SVHGHDDLG+AV+NF++AI GA+QVECT+NGIGERAGNA+LEEIVMAL+VR+ +YN + GR P+ LT + T EIWKTS+LVS LTGM++QPNKAIVG+NAFAHESGIHQDGILKN+ TYEIMDA IG+ +N LVLGKHSGRHAFR RL ELG++ L++ ELN+AFVRFKE+ADKKKE+T DLESIVN+E+RL G + K E R QV CGD + TAT+T+++ E ++E+T + GTGPVDAA+ A+ G+ K+ L E++V+S+T GIDALGEVTVR+ + + + G +ANTD+V A V Sbjct: 118 PTKHDLVTGRDPTRVKFFDTTLRDGEQSPGATLTGEEKLVIARQLAKLGVDIIEAGFPVASNGDFEAVRNIARTVGTRENPPIICGLARAVESDIARCWEAVKDAAFARIHTFIATSDIHMEHKLKKSRSQVLETVTRTVQYAKSLCEDIEFSAEDATRSDPEFLYEVFSRAIEAGATTINVPDTVGYTTPAEFGSLMRGIRRNVRGIENVCLSVHGHDDLGLAVSNFLSAIENGAQQVECTVNGIGERAGNASLEEIVMALYVRRQYYNNKLGR-PDPNALLTCVDTQEIWKTSKLVSNLTGMIVQPNKAIVGSNAFAHESGIHQDGILKNRLTYEIMDARLIGMQENQLVLGKHSGRHAFRKRLGELGFD-LTEDELNRAFVRFKELADKKKEVTLWDLESIVNDEVRLQGTEYLKLE--RVQVQCGDKLISTATVTIMHMELSRELTAVSIGTGPVDAAFKALNSIEGVPKVVLQEYMVNSITQGIDALGEVTVRIRGETDSRSFIGSAANTDIVVASV 635
BLAST of EWM28880.1 vs. NCBI_GenBank
Match: gi|299115810|emb|CBN74373.1| (2-Isopropylmalate synthase [Ectocarpus siliculosus]) HSP 1 Score: 691.034 bits (1782), Expect = 0.000e+0 Identity = 346/488 (70.90%), Postives = 403/488 (82.58%), Query Frame = 0 Query: 206 MTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKN-GLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSA 692 MT EEKL VAKQL KLGVD+IEAGFPIAS GDF+AV+ IA VG NPPIICGLARALKKDI+ C NAV A FPRIHTFIATSDIHM HKLKKSRE+VL ITREMVT+ARS +DVEFSAEDALRSD FL +VYSVA+EAGATT+NVPDTVGYTTP EF L+ LR V+G++ VTISVHGHDDLGMAVANFM+AI GGARQVECTINGIGERAGNAALEEIVMALHVRK++YNP F R E ALTNI+T EI K+S+LVS++TGM++Q NKAIVGANAF+HESGIHQDG+LKNK TYEIMDAE +GL ++ LVLGKHSGRHAFRSRL E GY +L+D ELN+AF+RFK++ADKKKEIT+LDL SIVN+E+R + +YEL+ QV G + PTAT+TL + + +E VAA GTGPVDAAY A+ +G KLLE+ V+SVTAGIDALGEVTVR++D S + Y G++A+TDV+ A Sbjct: 1 MTREEKLMVAKQLGKLGVDIIEAGFPIASQGDFEAVQEIATVVGQGGNPPIICGLARALKKDIDVCANAVAPARFPRIHTFIATSDIHMKHKLKKSREQVLEITREMVTHARSHVDDVEFSAEDALRSDYDFLSKVYSVAIEAGATTINVPDTVGYTTPKEFMGLMHHLRGTVRGIDKVTISVHGHDDLGMAVANFMSAIEGGARQVECTINGIGERAGNAALEEIVMALHVRKAYYNPSFDRPVLSETALTNIKTKEIVKSSKLVSSMTGMMVQANKAIVGANAFSHESGIHQDGVLKNKETYEIMDAELVGLHQDTSLVLGKHSGRHAFRSRLQETGY-SLTDDELNRAFLRFKDLADKKKEITSLDLASIVNDEIR-DVNIRRYELVGMQVAAGTTNKPTATVTLYDTDLEKEGCVAAIGTGPVDAAYKAIDDIVGTRSTKLLEYSVASVTAGIDALGEVTVRVQDELSKREYIGKAADTDVIHA 486
BLAST of EWM28880.1 vs. NCBI_GenBank
Match: gi|493668026|ref|WP_006618368.1| (2-isopropylmalate synthase [Arthrospira platensis] >gi|291565673|dbj|BAI87945.1| 2-isopropylmalate synthase [Arthrospira platensis NIES-39] >gi|1015660302|gb|AMW26664.1| 2-isopropylmalate synthase [Arthrospira platensis YZ]) HSP 1 Score: 680.633 bits (1755), Expect = 0.000e+0 Identity = 340/508 (66.93%), Postives = 416/508 (81.89%), Query Frame = 0 Query: 185 PMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKNGLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSA 692 P RV IFDTTLRDGEQ PG T+ +EKL +A+QLA+LGVDVIEAGF IAS+GDF+AV+RIAE+VG EN PIIC LAR++K DIE A+K AA PRIHTFIATSDIH+ +KLKK+R+EVL IT EMV YA+SLCED+EFS EDA RSDP FLYQV A+ AGATT+N+PDTVGYTTPSEF LIRG++ NV ++ ISVHGH+DLG+AVANF+ A++ GARQ+ECTINGIGERAGNAALEE+VMALHVR+ F+NP FGR + E+ +TNI T EI+KTSRLVS LTGM++QPNKAIVGANAFAHESGIHQDG+LKNK TYEIMDA+SIGL N +VLGKHSGRHAF++RL ELG++ LSD E+NKAFVRFK+VADKKKE+TN D+E+IVN+E++ + + EL+ QV CG++ PTAT+TL E QE+T AATGTGPVDA Y A+ + + + +L+EF V SVTAGIDA+GEVT+RL G+++ G +ANTD++ A Sbjct: 7 PDRVIIFDTTLRDGEQCPGATLNVDEKLVIARQLARLGVDVIEAGFAIASSGDFEAVQRIAETVG-TENGPIICSLARSVKADIEAAAKALKPAAHPRIHTFIATSDIHLKYKLKKTRQEVLDITSEMVAYAKSLCEDIEFSPEDAGRSDPEFLYQVLERAIAAGATTVNIPDTVGYTTPSEFGGLIRGIKENVPNIDQAIISVHGHNDLGLAVANFLEAVKNGARQLECTINGIGERAGNAALEELVMALHVRRQFFNPFFGRPADSEVPITNINTREIYKTSRLVSNLTGMLVQPNKAIVGANAFAHESGIHQDGVLKNKLTYEIMDAQSIGLNDNLIVLGKHSGRHAFQNRLQELGFD-LSDDEINKAFVRFKDVADKKKEVTNWDIEAIVNDEIQQTPELFRLELV--QVSCGNNARPTATVTLRTPE-GQELTDAATGTGPVDAVYKAINRVVNVPN-ELIEFAVQSVTAGIDAIGEVTIRLR--YQGRVFSGHAANTDIIVA 506
BLAST of EWM28880.1 vs. NCBI_GenBank
Match: gi|647979219|gb|KDR56307.1| (2-isopropylmalate synthase [Arthrospira platensis str. Paraca]) HSP 1 Score: 680.248 bits (1754), Expect = 0.000e+0 Identity = 340/508 (66.93%), Postives = 416/508 (81.89%), Query Frame = 0 Query: 185 PMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKNGLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSA 692 P RV IFDTTLRDGEQ PG T+ +EKL +A+QLA+LGVDVIEAGF IAS+GDF+AV+RIAE+VG EN PIIC LAR++K DIE A+K AA PRIHTFIATSDIH+ +KLKK+R+EVL IT EMV YA+SLCED+EFS EDA RSDP FLYQV A+ AGATT+N+PDTVGYTTPSEF LIRG++ NV ++ ISVHGH+DLG+AVANF+ A++ GARQ+ECTINGIGERAGNAALEE+VMALHVR+ F+NP FGR + E+ +TNI T EI+KTSRLVS LTGM++QPNKAIVGANAFAHESGIHQDG+LKNK TYEIMDA+SIGL N +VLGKHSGRHAF++RL ELG++ LSD E+NKAFVRFK+VADKKKE+TN D+E+IVN+E++ + + EL+ QV CG++ PTAT+TL E QE+T AATGTGPVDA Y A+ + + + +L+EF V SVTAGIDA+GEVT+RL G+++ G +ANTD++ A Sbjct: 5 PDRVIIFDTTLRDGEQCPGATLNVDEKLVIARQLARLGVDVIEAGFAIASSGDFEAVQRIAETVG-TENGPIICSLARSVKADIEAAAKALKPAAHPRIHTFIATSDIHLKYKLKKTRQEVLDITSEMVAYAKSLCEDIEFSPEDAGRSDPEFLYQVLERAIAAGATTVNIPDTVGYTTPSEFGGLIRGIKENVPNIDQAIISVHGHNDLGLAVANFLEAVKNGARQLECTINGIGERAGNAALEELVMALHVRRQFFNPFFGRPADSEVPITNINTREIYKTSRLVSNLTGMLVQPNKAIVGANAFAHESGIHQDGVLKNKLTYEIMDAQSIGLNDNLIVLGKHSGRHAFQNRLQELGFD-LSDDEINKAFVRFKDVADKKKEVTNWDIEAIVNDEIQQTPELFRLELV--QVSCGNNARPTATVTLRTPE-GQELTDAATGTGPVDAVYKAINRVVNVPN-ELIEFAVQSVTAGIDAIGEVTIRLR--YQGRVFSGHAANTDIIVA 504
BLAST of EWM28880.1 vs. NCBI_GenBank
Match: gi|809068397|ref|WP_046319062.1| (2-isopropylmalate synthase [Arthrospira sp. TJSD091]) HSP 1 Score: 677.552 bits (1747), Expect = 0.000e+0 Identity = 339/508 (66.73%), Postives = 415/508 (81.69%), Query Frame = 0 Query: 185 PMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKNGLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSA 692 P RV IFDTTLRDGEQ PG T+ +EKL +A+QLA+LGVDVIEAGF IAS+GDF+AV+RIAE+VG EN PIIC LAR++K DIE A+K AA PRIHTFIATSDIH+ +KLKK+R+EVL IT EMV YA+SLC+D+EFS EDA RSDP FLYQV A+ AGATT+N+PDTVGYTTPSEF LIRG++ NV ++ ISVHGH+DLG+AVANF+ A++ GARQ+ECTINGIGERAGNAALEE+VMALHVR+ F+NP FGR + E +TNI T EI+KTSRLVS LTGM++QPNKAIVGANAFAHESGIHQDG+LKNK TYEIMDA+SIGL N +VLGKHSGRHAF++RL ELG++ LSD E+NKAFVRFK+VADKKKE+TN D+E+IVN+E++ + + EL+ QV CG++ PTAT+TL E QE+T AATGTGPVDA Y A+ + + + +L+EF V SVTAGIDA+GEVT+RL G+++ G +ANTD++ A Sbjct: 7 PDRVIIFDTTLRDGEQCPGATLNVDEKLVIARQLARLGVDVIEAGFAIASSGDFEAVQRIAETVG-TENGPIICSLARSVKADIEAAAKALKPAAHPRIHTFIATSDIHLKYKLKKTRQEVLDITSEMVAYAKSLCQDIEFSPEDAGRSDPEFLYQVLERAIAAGATTVNIPDTVGYTTPSEFGGLIRGIKENVPNIDQAIISVHGHNDLGLAVANFLEAVKNGARQLECTINGIGERAGNAALEELVMALHVRRQFFNPFFGRPADSEAPITNINTREIYKTSRLVSNLTGMLVQPNKAIVGANAFAHESGIHQDGVLKNKLTYEIMDAQSIGLNDNLIVLGKHSGRHAFQNRLQELGFD-LSDDEINKAFVRFKDVADKKKEVTNWDIEAIVNDEIQQTPELFRLELV--QVSCGNNARPTATVTLRTPE-GQELTDAATGTGPVDAVYKAINRVVNVPN-ELIEFSVQSVTAGIDAIGEVTIRLR--YQGRVFSGHAANTDIIVA 506
BLAST of EWM28880.1 vs. NCBI_GenBank
Match: gi|493672064|ref|WP_006622399.1| (MULTISPECIES: 2-isopropylmalate synthase [Arthrospira] >gi|375324498|emb|CCE20079.1| 2-isopropylmalate synthase [Arthrospira sp. PCC 8005] >gi|406714423|gb|EKD09588.1| 2-isopropylmalate synthase [Arthrospira platensis C1] >gi|585308762|emb|CDM98586.1| 2-isopropylmalate synthase [Arthrospira sp. PCC 8005]) HSP 1 Score: 676.781 bits (1745), Expect = 0.000e+0 Identity = 338/508 (66.54%), Postives = 415/508 (81.69%), Query Frame = 0 Query: 185 PMRVKIFDTTLRDGEQSPGCTMTAEEKLQVAKQLAKLGVDVIEAGFPIASTGDFDAVRRIAESVGNMENPPIICGLARALKKDIETCWNAVKYAAFPRIHTFIATSDIHMLHKLKKSREEVLGITREMVTYARSLCEDVEFSAEDALRSDPAFLYQVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVKGVEGVTISVHGHDDLGMAVANFMAAIRGGARQVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRAPEDEMALTNIQTTEIWKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGILKNKSTYEIMDAESIGLAKNGLVLGKHSGRHAFRSRLTELGYEALSDAELNKAFVRFKEVADKKKEITNLDLESIVNEEMRLGYDAGKYELLRCQVICGDSQVPTATITLLNKEDNQEVTVAATGTGPVDAAYVAVTKALGIEKIKLLEFVVSSVTAGIDALGEVTVRLEDLSSGKIYYGRSANTDVVSA 692 P RV IFDTTLRDGEQ PG T+ +EKL +A+QLA+LGVDVIEAGF IAS+GDF+AV+RIAE+VG EN PIIC LAR++K DIE A+K AA PRIHTFIATSDIH+ +KLKK+R+EVL IT EMV YA+SLC+D+EFS EDA RSDP FLYQV A+ AGATT+N+PDTVGYTTPSEF LIRG++ NV ++ ISVHGH+DLG+AVANF+ A++ GARQ+ECTINGIGERAGNAALEE+VMALHVR+ F+NP FGR + E +TNI T EI+KTSRLVS LTGM++QPNKAIVGANAFAHESGIHQDG+LKNK TYEIMDA+SIGL N +VLGKHSGRHAF++RL ELG++ LSD E+NKAFVRFK+VADKKKE+TN D+E+IVN+E++ + + EL+ QV CG++ PTAT+TL + QE+T AATGTGPVDA Y A+ + + + +L+EF V SVTAGIDA+GEVT+RL G+++ G +ANTD++ A Sbjct: 7 PDRVIIFDTTLRDGEQCPGATLNVDEKLVIARQLARLGVDVIEAGFAIASSGDFEAVQRIAETVG-TENGPIICSLARSVKADIEAAAKALKPAAHPRIHTFIATSDIHLKYKLKKTRQEVLDITSEMVAYAKSLCQDIEFSPEDAGRSDPEFLYQVLERAIAAGATTVNIPDTVGYTTPSEFGGLIRGIKENVPNIDQAIISVHGHNDLGLAVANFLEAVKNGARQLECTINGIGERAGNAALEELVMALHVRRQFFNPFFGRPADSEAPITNINTREIYKTSRLVSNLTGMLVQPNKAIVGANAFAHESGIHQDGVLKNKLTYEIMDAQSIGLNDNLIVLGKHSGRHAFQNRLQELGFD-LSDDEINKAFVRFKDVADKKKEVTNWDIEAIVNDEIQQTPELFRLELV--QVSCGNNARPTATVTLRTPQ-GQELTDAATGTGPVDAVYKAINRVVNVPN-ELIEFSVQSVTAGIDAIGEVTIRLR--YQGRVFSGHAANTDIIVA 506 The following BLAST results are available for this feature:
BLAST of EWM28880.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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