EWM28884.1, cds1789 (CDS) Nannochloropsis gaditana

Overview
NameEWM28884.1
Unique Namecds1789
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:138295..142344 +

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Properties
Property NameValue
Protein idEWM28884.1
ProductProtease-associated domain, PA
Orig transcript idgnl|cribi|Naga_100269g3.9909.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:138295..142344 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR003137Protease-assoc_domain
Homology
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BLAST of EWM28884.1 vs. NCBI_GenBank
Match: gi|585111317|gb|EWM28884.1| (Protease-associated domain, PA [Nannochloropsis gaditana])

HSP 1 Score: 2692.92 bits (6979), Expect = 0.000e+0
Identity = 1349/1349 (100.00%), Postives = 1349/1349 (100.00%), Query Frame = 0 
Query:    1 MRFRLGEKALPPTTGTLLRMQHKVLRPLLAPAFCSIFCTIVFPLVLAQQPSYADSRTKLPSGARTAPEASPAVASPPFLTPSTTAAPGFQVFRKFLPPNTSTWRDGRLSGQIEEAWMPFRPLPPLALRTTRDTTWQFLPQDSSKSVLFVPVEHSLKFFRTFRWEETFTGLSPWSSRPDLEMVFVPMTESTDAAALVREAETALAAIPRDAEFWLPRMHFSLDTVDSLREKHSWFADCVDAWSMPATTVGVLWNPSERAGQAETATSLSLFDATPPISGLATPGPGVLGGCGDEIAGGTCGHLAFFGSACLVQGGAGLAVPPLPVQDVEGKVALVARGGCSFAEKVRVVKGAGAIAAIIYSDEHPRTAWLATEEEGGEAKVPSMITPESFPLALIDQAPGQWLRDTLVDSQGGRNMSVALFERTSAPWAFAADGTGHFRRLVRGDASLAAAILEATKFEYEALVAKSNPPAAELGLGATTVTVPVMKGEQTVGEKATRMLAKEVEIPSYVTERPNSGLHLRVHLMCPARAEENCPSLSSFVKLYACEASGGTGPSHRRVLDGAPGSEEENGARGRLALRPEGFAPDVGKAQDVAPPPIDTSGGDGNVGHVRASSLPTSPSPSASRPPFPTAVAATPSSPTSLRTPPKGTSPLKATPTGLGGSHGKGQDARVWEGCAGEVVELGRLVAPAGREMLTVVEASPFLAALPLKGDYRRGGKSEEYSPHRPVVKVFVLGADGYNVSLSLLFTAASPGDLVPFQTFRIDTSDPGTTQTRQGDSQSTAASNSNFKIVSLPKGVPSYSLVASITAEGIPPGSDLPSAAHTFQVQELAPSLTSSSPPPSPLTWDVPLLLQSQPFGCSNLTLTRAGVIPNQLGDWYSSQPGFCPGSSVALKQFAVTRPTAPEEGEIKVVYLQGRESPRQGRGDGEALSASGGEGLVDLEAYVVTYAFLPPTPQVSSVHFVNVSTPFPPSTDPPLPPKASSPTLNEASVSSQAGRTTLTLRLPGPSFADSQDAHILFPSPTADTSQIRMPIDLYRVTLSERVSGDTFVYTFPVAAPPDLGVTSEGEVPVSVAPPNSQAVQVEVANTTAAIPTLPTEVEGGKDVEERGGARGLQGGRRRLPVGSQTEGQGASSAPPPSLPPPPPIGPAKSPTSHRLLGQNRPRLSRGAGAGGCPDGERAWKLDLCPFRGLARRQPGQGTGRPRREGRWAVARHHDRLGHGPTGGGGFDRSAGRRCVEACFPRALCRHGKLRGRGRGGQQWGRFGTGGRSIGTEARPRKQERGRGISRGQFATGGRDRGKEGGREAFSTSIGQARKSVPVEQWAWGRGWREEGGKGGKEGGNKGGGRGRAPDI 1349
            MRFRLGEKALPPTTGTLLRMQHKVLRPLLAPAFCSIFCTIVFPLVLAQQPSYADSRTKLPSGARTAPEASPAVASPPFLTPSTTAAPGFQVFRKFLPPNTSTWRDGRLSGQIEEAWMPFRPLPPLALRTTRDTTWQFLPQDSSKSVLFVPVEHSLKFFRTFRWEETFTGLSPWSSRPDLEMVFVPMTESTDAAALVREAETALAAIPRDAEFWLPRMHFSLDTVDSLREKHSWFADCVDAWSMPATTVGVLWNPSERAGQAETATSLSLFDATPPISGLATPGPGVLGGCGDEIAGGTCGHLAFFGSACLVQGGAGLAVPPLPVQDVEGKVALVARGGCSFAEKVRVVKGAGAIAAIIYSDEHPRTAWLATEEEGGEAKVPSMITPESFPLALIDQAPGQWLRDTLVDSQGGRNMSVALFERTSAPWAFAADGTGHFRRLVRGDASLAAAILEATKFEYEALVAKSNPPAAELGLGATTVTVPVMKGEQTVGEKATRMLAKEVEIPSYVTERPNSGLHLRVHLMCPARAEENCPSLSSFVKLYACEASGGTGPSHRRVLDGAPGSEEENGARGRLALRPEGFAPDVGKAQDVAPPPIDTSGGDGNVGHVRASSLPTSPSPSASRPPFPTAVAATPSSPTSLRTPPKGTSPLKATPTGLGGSHGKGQDARVWEGCAGEVVELGRLVAPAGREMLTVVEASPFLAALPLKGDYRRGGKSEEYSPHRPVVKVFVLGADGYNVSLSLLFTAASPGDLVPFQTFRIDTSDPGTTQTRQGDSQSTAASNSNFKIVSLPKGVPSYSLVASITAEGIPPGSDLPSAAHTFQVQELAPSLTSSSPPPSPLTWDVPLLLQSQPFGCSNLTLTRAGVIPNQLGDWYSSQPGFCPGSSVALKQFAVTRPTAPEEGEIKVVYLQGRESPRQGRGDGEALSASGGEGLVDLEAYVVTYAFLPPTPQVSSVHFVNVSTPFPPSTDPPLPPKASSPTLNEASVSSQAGRTTLTLRLPGPSFADSQDAHILFPSPTADTSQIRMPIDLYRVTLSERVSGDTFVYTFPVAAPPDLGVTSEGEVPVSVAPPNSQAVQVEVANTTAAIPTLPTEVEGGKDVEERGGARGLQGGRRRLPVGSQTEGQGASSAPPPSLPPPPPIGPAKSPTSHRLLGQNRPRLSRGAGAGGCPDGERAWKLDLCPFRGLARRQPGQGTGRPRREGRWAVARHHDRLGHGPTGGGGFDRSAGRRCVEACFPRALCRHGKLRGRGRGGQQWGRFGTGGRSIGTEARPRKQERGRGISRGQFATGGRDRGKEGGREAFSTSIGQARKSVPVEQWAWGRGWREEGGKGGKEGGNKGGGRGRAPDI
Sbjct:    1 MRFRLGEKALPPTTGTLLRMQHKVLRPLLAPAFCSIFCTIVFPLVLAQQPSYADSRTKLPSGARTAPEASPAVASPPFLTPSTTAAPGFQVFRKFLPPNTSTWRDGRLSGQIEEAWMPFRPLPPLALRTTRDTTWQFLPQDSSKSVLFVPVEHSLKFFRTFRWEETFTGLSPWSSRPDLEMVFVPMTESTDAAALVREAETALAAIPRDAEFWLPRMHFSLDTVDSLREKHSWFADCVDAWSMPATTVGVLWNPSERAGQAETATSLSLFDATPPISGLATPGPGVLGGCGDEIAGGTCGHLAFFGSACLVQGGAGLAVPPLPVQDVEGKVALVARGGCSFAEKVRVVKGAGAIAAIIYSDEHPRTAWLATEEEGGEAKVPSMITPESFPLALIDQAPGQWLRDTLVDSQGGRNMSVALFERTSAPWAFAADGTGHFRRLVRGDASLAAAILEATKFEYEALVAKSNPPAAELGLGATTVTVPVMKGEQTVGEKATRMLAKEVEIPSYVTERPNSGLHLRVHLMCPARAEENCPSLSSFVKLYACEASGGTGPSHRRVLDGAPGSEEENGARGRLALRPEGFAPDVGKAQDVAPPPIDTSGGDGNVGHVRASSLPTSPSPSASRPPFPTAVAATPSSPTSLRTPPKGTSPLKATPTGLGGSHGKGQDARVWEGCAGEVVELGRLVAPAGREMLTVVEASPFLAALPLKGDYRRGGKSEEYSPHRPVVKVFVLGADGYNVSLSLLFTAASPGDLVPFQTFRIDTSDPGTTQTRQGDSQSTAASNSNFKIVSLPKGVPSYSLVASITAEGIPPGSDLPSAAHTFQVQELAPSLTSSSPPPSPLTWDVPLLLQSQPFGCSNLTLTRAGVIPNQLGDWYSSQPGFCPGSSVALKQFAVTRPTAPEEGEIKVVYLQGRESPRQGRGDGEALSASGGEGLVDLEAYVVTYAFLPPTPQVSSVHFVNVSTPFPPSTDPPLPPKASSPTLNEASVSSQAGRTTLTLRLPGPSFADSQDAHILFPSPTADTSQIRMPIDLYRVTLSERVSGDTFVYTFPVAAPPDLGVTSEGEVPVSVAPPNSQAVQVEVANTTAAIPTLPTEVEGGKDVEERGGARGLQGGRRRLPVGSQTEGQGASSAPPPSLPPPPPIGPAKSPTSHRLLGQNRPRLSRGAGAGGCPDGERAWKLDLCPFRGLARRQPGQGTGRPRREGRWAVARHHDRLGHGPTGGGGFDRSAGRRCVEACFPRALCRHGKLRGRGRGGQQWGRFGTGGRSIGTEARPRKQERGRGISRGQFATGGRDRGKEGGREAFSTSIGQARKSVPVEQWAWGRGWREEGGKGGKEGGNKGGGRGRAPDI 1349
The following BLAST results are available for this feature:
BLAST of EWM28884.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111317|gb|EWM28884.1|0.000e+0100.00Protease-associated domain, PA [Nannochloropsis ga... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1793rna1793Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications