EWM28885.1, cds1787 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28885.1 vs. NCBI_GenBank
Match: gi|585111318|gb|EWM28885.1| (exosome complex exonuclease, partial [Nannochloropsis gaditana]) HSP 1 Score: 1268.83 bits (3282), Expect = 0.000e+0 Identity = 615/615 (100.00%), Postives = 615/615 (100.00%), Query Frame = 0
Query: 1 VLWVLASQRGPRRGGGGSTVSALFVPVDRRLPKIRIQTRQRDVLQDKRILVAVDAWPADSRYPAGHYIKTLGSAGDKEVETEVLLHEYDIPWEPFSEKVMACLPPSDWSMTPENTKGRVDLRKLSVMSIDPPGCKDIDDALHCTPLPNGNFAVGVHIADVSYFVQPGSALDEEAANRSTSTYLVQRRLDMLPKLLTETLCSLTSTSDHFAFSVLWELTPNADIVSVDFCKSIIRSVASLSYQEAQNIHDDPHAQDAVAQGIRGLNSLAKKLRAKRMEAGALMLASTEVKFVLDADSSDPLDVQMYQLKETHALVEEFMLLANITVGKKILRHYPTLSLLRRHPSPSRERFESLIAAAASRGFSLCVDDSSELQQSLDASVDKDDPNINKIIRILATRCMFPAQYFCSGECSQDEWHHYGLAAPIYTHFTSPIRRYADIVVHRLLAASIGVAPLPEALLDKGGMHDLAENMNRRHKAAQNAGRGSTAFHTVLFFKENPVEAEDAYILRILETRLIVLVPRFGIEGTIDLKGLADQGLLNRQADGHRITCPGKVELKVFDKIRVGIRVAEGKAAHRDAVVYTLQSPRIPGLDVEREEGARNVEGGGKKRKSADAKKK 615
VLWVLASQRGPRRGGGGSTVSALFVPVDRRLPKIRIQTRQRDVLQDKRILVAVDAWPADSRYPAGHYIKTLGSAGDKEVETEVLLHEYDIPWEPFSEKVMACLPPSDWSMTPENTKGRVDLRKLSVMSIDPPGCKDIDDALHCTPLPNGNFAVGVHIADVSYFVQPGSALDEEAANRSTSTYLVQRRLDMLPKLLTETLCSLTSTSDHFAFSVLWELTPNADIVSVDFCKSIIRSVASLSYQEAQNIHDDPHAQDAVAQGIRGLNSLAKKLRAKRMEAGALMLASTEVKFVLDADSSDPLDVQMYQLKETHALVEEFMLLANITVGKKILRHYPTLSLLRRHPSPSRERFESLIAAAASRGFSLCVDDSSELQQSLDASVDKDDPNINKIIRILATRCMFPAQYFCSGECSQDEWHHYGLAAPIYTHFTSPIRRYADIVVHRLLAASIGVAPLPEALLDKGGMHDLAENMNRRHKAAQNAGRGSTAFHTVLFFKENPVEAEDAYILRILETRLIVLVPRFGIEGTIDLKGLADQGLLNRQADGHRITCPGKVELKVFDKIRVGIRVAEGKAAHRDAVVYTLQSPRIPGLDVEREEGARNVEGGGKKRKSADAKKK
Sbjct: 1 VLWVLASQRGPRRGGGGSTVSALFVPVDRRLPKIRIQTRQRDVLQDKRILVAVDAWPADSRYPAGHYIKTLGSAGDKEVETEVLLHEYDIPWEPFSEKVMACLPPSDWSMTPENTKGRVDLRKLSVMSIDPPGCKDIDDALHCTPLPNGNFAVGVHIADVSYFVQPGSALDEEAANRSTSTYLVQRRLDMLPKLLTETLCSLTSTSDHFAFSVLWELTPNADIVSVDFCKSIIRSVASLSYQEAQNIHDDPHAQDAVAQGIRGLNSLAKKLRAKRMEAGALMLASTEVKFVLDADSSDPLDVQMYQLKETHALVEEFMLLANITVGKKILRHYPTLSLLRRHPSPSRERFESLIAAAASRGFSLCVDDSSELQQSLDASVDKDDPNINKIIRILATRCMFPAQYFCSGECSQDEWHHYGLAAPIYTHFTSPIRRYADIVVHRLLAASIGVAPLPEALLDKGGMHDLAENMNRRHKAAQNAGRGSTAFHTVLFFKENPVEAEDAYILRILETRLIVLVPRFGIEGTIDLKGLADQGLLNRQADGHRITCPGKVELKVFDKIRVGIRVAEGKAAHRDAVVYTLQSPRIPGLDVEREEGARNVEGGGKKRKSADAKKK 615
BLAST of EWM28885.1 vs. NCBI_GenBank
Match: gi|299115727|emb|CBN74292.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 744.577 bits (1921), Expect = 0.000e+0 Identity = 368/601 (61.23%), Postives = 457/601 (76.04%), Query Frame = 0
Query: 15 GGGSTVSALFVPVDRRLPKIRIQTRQRDVLQDKRILVAVDAWPADSRYPAGHYIKTLGSAGDKEVETEVLLHEYDIPWEPFSEKVMACLPPSDWSMTPENTKGRVDLRKLSVMSIDPPGCKDIDDALHCTPLPNGNFAVGVHIADVSYFVQPGSALDEEAANRSTSTYLVQRRLDMLPKLLTETLCSLTSTSDHFAFSVLWELTPNADIVSVDFCKSIIRSVASLSYQEAQNIHDDPHAQDAVAQGIRGLNSLAKKLRAKRMEAGALMLASTEVKFVLDADSSDPLDVQMYQLKETHALVEEFMLLANITVGKKILRHYPTLSLLRRHPSPSRERFESLIAAAASRGFSLCVDDSSELQQSLDASVDKDDPNINKIIRILATRCMFPAQYFCSGECSQDEWHHYGLAAPIYTHFTSPIRRYADIVVHRLLAASIGVAPLPEALLDKGGMHDLAENMNRRHKAAQNAGRGSTAFHTVLFFKENPVEAEDAYILRILETRLIVLVPRFGIEGTIDLKGLADQGLLNRQADGHRITCP------GKVELKVFDKIRVGIRVAEGKAAHRDAVVYTLQSPRIPGLDVEREEGARNVEGGGKKRKS 609
G G + SALF+PVDR++P +RIQTRQRDVL KRILVA+D+WPA +YP GHY+KTLG G K ETEV+L E++IP E FS KV+ACLPP DW++TPEN++GR DLR L V+SIDPPGCKDIDDALH PL NGN VGVHIADV++FV+ GSALD+EA++RSTSTYLV+RRLDMLP +LTETLCSL D FAFSV+WE+TP IV VDFCKSII SVA L+Y EAQ + DDP+ QD A+ +R LN LAK R +RM++GAL LAS EV+FVLD++S +P DVQMY LKET+ALVEEFMLLANITVGKKILRH+PTLS+LRRHPSPSR++F+ L+A A + G L VD+S +L QSLD + + DP NK++RIL+TRCM PAQYFCSGE SQ++WHHYGLAAPIYTHFTSPIRRYAD+ VHRLL A+IGVAPLP L+DK +H+L ENMNRRH++AQ AGR S HT ++F NP E EDA++L + +T+L V+VPRFGIEGTI+L ++QA P G+ +++ DK+RV + V A H+ A + TL SP + G+ E + G ++RK+
Sbjct: 399 GKGQSTSALFMPVDRKIPWVRIQTRQRDVLSTKRILVAMDSWPAWCKYPLGHYVKTLGEKGAKATETEVILLEHEIPHESFSGKVLACLPPEDWAITPENSEGRKDLRHLPVLSIDPPGCKDIDDALHARPLENGNLEVGVHIADVTHFVEAGSALDQEASSRSTSTYLVERRLDMLPGMLTETLCSLKPNVDRFAFSVIWEMTPAGVIVDVDFCKSIIHSVAGLTYNEAQLMLDDPNIQDVKAESVRRLNDLAKIFRKRRMDSGALTLASPEVRFVLDSESQNPTDVQMYALKETNALVEEFMLLANITVGKKILRHFPTLSVLRRHPSPSRQQFDGLLAIAQAVGIKLDVDNSKKLAQSLDRATREGDPYFNKLLRILSTRCMMPAQYFCSGEQSQEDWHHYGLAAPIYTHFTSPIRRYADVCVHRLLGAAIGVAPLPAFLMDKALLHNLTENMNRRHRSAQLAGRASVGLHTEMYFANNPTE-EDAFVLSVDKTKLSVIVPRFGIEGTIELDAGDGTFDFDKQALKLVYVPPSSVGDVGQTSIQIMDKVRVFVDVV-NNARHQGARM-TLISP-VMGVGEEVPVPEPAIPSGKRQRKT 995
BLAST of EWM28885.1 vs. NCBI_GenBank
Match: gi|1210514771|dbj|GAX26250.1| (exosome complex exonuclease DIS3/RRP44 [Fistulifera solaris]) HSP 1 Score: 686.026 bits (1769), Expect = 0.000e+0 Identity = 332/575 (57.74%), Postives = 426/575 (74.09%), Query Frame = 0
Query: 13 RGGGGSTVSALFVPVDRRLPKIRIQTRQRDVLQDKRILVAVDAWPADSRYPAGHYIKTLGSAGDKEVETEVLLHEYDIPWEPFSEKVMACLPPSDWSMTPENTKGRVDLRKLSVMSIDPPGCKDIDDALHCTPLPNGNFAVGVHIADVSYFVQPGSALDEEAANRSTSTYLVQRRLDMLPKLLTETLCSLTSTSDHFAFSVLWELTPNADIVSVDFCKSIIRSVASLSYQEAQNIHDDPH-AQDAVAQGIRGLNSLAKKLRAKRMEAGALMLASTEVKFVLDADSSDPLDVQMYQLKETHALVEEFMLLANITVGKKILRHYPTLSLLRRHPSPSRERFESLIAAAASRGFSLCVDDSSELQQSLDASVDKDDPNINKIIRILATRCMFPAQYFCSGECSQDEWHHYGLAAPIYTHFTSPIRRYADIVVHRLLAASIGVAPLPEALLDKGGMHDLAENMNRRHKAAQNAGRGSTAFHTVLFFKENPVEAEDAYILRI-----LETRLIVLVPRFGIEGTIDLKGLADQGLLNRQADGHRITCPGKVE---LKVFDKIRVGIRVAEGKAAHRDAVV 578
R T + +F PV++++P + ++T QRD L +RI+V++D+WPA+SRYP GHY++T+G AGDK+VETEVLL ++DIP EPF V+ACLPP D+ ++ EN+ GRVDLR L V+SIDPPGCKDIDDALHC LPNGN+ VGVHIADV+++V+PG+A+D EAANRSTSTYLV +RLDMLP LLT LCSL D +AFSVLWE++P+ +I+ VDF KSII S+A+L+YQ+AQ+ D P D A ++ L LA+K R +R++AGAL LAS EVKFVLD++S +P DVQ Y L E +ALVEEFMLLAN+TV KKILR YPTLS+LRRHP+P+R F+ LI+ A S G S+ ++DS +L SLDA+ K DP INK++RIL+TRCM PAQYFCSGE EWHHYGLAAP+YTHFTSPIRRYAD+ VHRLLAASI VAPLP+ L K MHDL NMNRRH+AAQ AGR S HT+++F + + EDAY+L + + V+VPR+GIEG + L D + R + HRI GK + +KVFDK+RV + V E + R+ +
Sbjct: 414 RENPDGTATCVFFPVNKKIPPVLLRTTQRDRLFGQRIVVSLDSWPANSRYPLGHYVRTIGPAGDKDVETEVLLQQHDIPHEPFPAAVLACLPPEDYKISAENSPGRVDLRHLPVLSIDPPGCKDIDDALHCLVLPNGNYQVGVHIADVTHYVKPGTAMDLEAANRSTSTYLVNKRLDMLPALLTTDLCSLKCNVDRYAFSVLWEVSPDGNIIQVDFQKSIIHSIAALTYQQAQSFIDQPDDPTDIQACAVKRLAVLARKFRQRRIDAGALTLASPEVKFVLDSESLNPTDVQAYALLEANALVEEFMLLANVTVAKKILRQYPTLSVLRRHPAPNRSMFDPLISKAQSIGLSINIEDSKKLADSLDAAQVKSDPYINKLLRILSTRCMSPAQYFCSGELRASEWHHYGLAAPVYTHFTSPIRRYADVCVHRLLAASINVAPLPQHLSSKSYMHDLCTNMNRRHRAAQLAGRASVQLHTLIYFSGDGAKEEDAYVLDVDTDKGSDPSFTVMVPRYGIEGRVRL----DAAEVERFPEEHRIAWAGKTKSCSVKVFDKVRVRLSVREMQGDQRELAI 984
BLAST of EWM28885.1 vs. NCBI_GenBank
Match: gi|566009724|gb|ETI32635.1| (hypothetical protein F443_20599 [Phytophthora parasitica P1569] >gi|568035253|gb|ETM32903.1| hypothetical protein L914_19795 [Phytophthora parasitica]) HSP 1 Score: 682.559 bits (1760), Expect = 0.000e+0 Identity = 345/601 (57.40%), Postives = 429/601 (71.38%), Query Frame = 0
Query: 11 PRRGGGGSTVSALFVPVDRRLPKIRIQTRQRDVLQDKRILVAVDAWPADSRYPAGHYIKTLGSAGDKEVETEVLLHEYDIPWEPFSEKVMACLPPSDWSMTPENTKGRVDLRKLSVMSIDPPGCKDIDDALHCTPLPNGNFAVGVHIADVSYFVQPGSALDEEAANRSTSTYLVQRRLDMLPKLLTETLCSLTSTSDHFAFSVLWELTPNAD----IVSVDFCKSIIRSVASLSYQEAQNIHDDPHAQDAVAQ------------------------GIRGLNSLAKKLRAKRMEAGALMLASTEVKFVLDADSSDPLDVQMYQLKETHALVEEFMLLANITVGKKILRHYPTLSLLRRHPSPSRERFESLIAAAASRGFSLCVDDSSELQQSLDASVDKD------------DPNINKIIRILATRCMFPAQYFCSGECSQDEWHHYGLAAPIYTHFTSPIRRYADIVVHRLLAASIGVAPLPEALLDKGGMHDLAENMNRRHKAAQNAGRGSTAFHTVLFFKENPVEAEDAYILRILETRLIVLVPRFGIEGTI---DLKGLADQGLLNRQADGHRITCPGK-VELKVFDKIRVGIRVA 567
PR G ++ S L VPVDR++PKI+IQTRQ++ L DKR+LVA+D+WPADS++P GHY++TLG GDKE ET VLL E+DIP + FS++VM CLPP DW +TPEN+ GR DLR L V SIDPP CKDIDDALH LPNGN VGVHIADV++FV PGSALDEEAA+R TSTYLV RRLDMLP LLT LCSLT T DHFAFSVLWEL D ++ V FCKS+IRSVASLSYQ+AQ DDP A Q GI+ LN++A++LRAKR+EAGAL LAS EV+FVLD ++ +PLDVQMY L++T+ALVEEFMLLANITV KKI+RH+PT S+LRRHP+PS+ +F+ L + A + G L VD S +LQ SLDA+ DK+ +P NK++RI+ TRCM PA YF SGE + E+HHYGLAAPIYTHFTSPIRRYAD+VVHRLLAA+IGVAPLP L +K +H++++ +NRRH AAQ AGR S HTVL+F++ P DA I ++ + VL+PRFGIEG I D D+ ++ H + K ++L+VFD++RV + VA
Sbjct: 433 PRDGALNASGSCLVVPVDRKVPKIKIQTRQQEALMDKRVLVAIDSWPADSKFPLGHYVRTLGVIGDKETETNVLLIEHDIPCDQFSDEVMRCLPPEDWKITPENSTGRRDLRDLPVCSIDPPNCKDIDDALHAQLLPNGNLQVGVHIADVTHFVAPGSALDEEAADRGTSTYLVDRRLDMLPGLLTTKLCSLTDTEDHFAFSVLWELKLVGDNDVQVIDVQFCKSLIRSVASLSYQQAQEFLDDPDAGGVYGQDTKPKKKKKGGSDEEFERRQLLGSGIKTLNTIARRLRAKRIEAGALTLASPEVRFVLDTETQNPLDVQMYTLRDTNALVEEFMLLANITVAKKIVRHFPTFSMLRRHPAPSKRQFDLLCSQAKAVGVELHVDTSKQLQDSLDAA-DKEAAGGKRKHGSKANPYFNKLLRIMTTRCMMPASYFSSGEVAPPEFHHYGLAAPIYTHFTSPIRRYADVVVHRLLAAAIGVAPLPSYLENKSHLHEISDQLNRRHHAAQLAGRASVTLHTVLYFQQYPTRT-DAVITKVKNNGVGVLLPRFGIEGMIFLCDKDEQDDEDVVKFDGTSHTLLLVQKNLKLQVFDRVRVKVYVA 1031
BLAST of EWM28885.1 vs. NCBI_GenBank
Match: gi|970628951|gb|KUF76372.1| (Exosome complex exonuclease RRP44 [Phytophthora nicotianae]) HSP 1 Score: 681.789 bits (1758), Expect = 0.000e+0 Identity = 345/601 (57.40%), Postives = 431/601 (71.71%), Query Frame = 0
Query: 11 PRRGGGGSTVSALFVPVDRRLPKIRIQTRQRDVLQDKRILVAVDAWPADSRYPAGHYIKTLGSAGDKEVETEVLLHEYDIPWEPFSEKVMACLPPSDWSMTPENTKGRVDLRKLSVMSIDPPGCKDIDDALHCTPLPNGNFAVGVHIADVSYFVQPGSALDEEAANRSTSTYLVQRRLDMLPKLLTETLCSLTSTSDHFAFSVLWELTPNAD----IVSVDFCKSIIRSVASLSYQEAQNIHDDPHA-----QDA-------------------VAQGIRGLNSLAKKLRAKRMEAGALMLASTEVKFVLDADSSDPLDVQMYQLKETHALVEEFMLLANITVGKKILRHYPTLSLLRRHPSPSRERFESLIAAAASRGFSLCVDDSSELQQSLDASVDKD------------DPNINKIIRILATRCMFPAQYFCSGECSQDEWHHYGLAAPIYTHFTSPIRRYADIVVHRLLAASIGVAPLPEALLDKGGMHDLAENMNRRHKAAQNAGRGSTAFHTVLFFKENPVEAEDAYILRILETRLIVLVPRFGIEGTI---DLKGLADQGLLNRQADGHRITCPGK-VELKVFDKIRVGIRVA 567
PR G ++ S L VPVDR++PKI+IQTRQ++ L DKR+LVA+D+WPADS++P GHY++TLG GDKE ET VLL E+DIP + FS++VM CLPP DW +TPEN+ GR DLR L V SIDPP CKDIDDALH LPNGN VGVHIADV++FV PGSALDEEAA+R TSTYLV RRLDMLP LLT LCSLT T DHFAFSVLWEL D ++ V FCKS+IRSVASLSYQ+AQ DDP A QD + GI+ LN++A++LRAKR+EAGAL LAS EV+FVLD ++ +PLDVQMY L++T+ALVEEFMLLANITV KKI+RH+PT S+LRRHP+PS+ +F+ L + A + G L VD S +LQ SLDA+ DK+ +P NK++RI+ TRCM PA YF SGE + E+HHYGLAAPIYTHFTSPIRRYAD+VVHRLLAA+IGVAPLP L +K +H++++ +NRRH AAQ AGR S HTVL+F++ P DA I ++ + VL+PRFGIEG I D D+ ++ H + K ++L+VF+++RV + VA
Sbjct: 375 PRDGALNASGSCLVVPVDRKVPKIKIQTRQQEALMDKRVLVAIDSWPADSKFPLGHYVRTLGVIGDKETETNVLLIEHDIPCDQFSDEVMRCLPPEDWKITPENSTGRRDLRDLPVCSIDPPNCKDIDDALHAQLLPNGNLQVGVHIADVTHFVAPGSALDEEAADRGTSTYLVDRRLDMLPGLLTTKLCSLTDTEDHFAFSVLWELKLVGDNDVQVIDVQFCKSLIRSVASLSYQQAQEFLDDPDAGGVYGQDTKPKKKKKGESDEEFERRQLLGSGIKTLNTIARRLRAKRIEAGALTLASPEVRFVLDTETQNPLDVQMYTLRDTNALVEEFMLLANITVAKKIVRHFPTFSMLRRHPAPSKRQFDLLCSQAKAVGVELHVDTSKQLQDSLDAA-DKEAAGGKRKHGSKANPYFNKLLRIMTTRCMMPASYFSSGEVAPPEFHHYGLAAPIYTHFTSPIRRYADVVVHRLLAAAIGVAPLPSYLENKSHLHEISDQLNRRHHAAQLAGRASVTLHTVLYFQQYPTRT-DAVITKVKNNGVGVLLPRFGIEGMIFLCDKDEQDDEDVVKFDGTSHTLLLVQKNLKLQVFNRVRVKVYVA 973
BLAST of EWM28885.1 vs. NCBI_GenBank
Match: gi|570937214|gb|ETP02471.1| (hypothetical protein F441_20470 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 681.019 bits (1756), Expect = 0.000e+0 Identity = 345/601 (57.40%), Postives = 431/601 (71.71%), Query Frame = 0
Query: 11 PRRGGGGSTVSALFVPVDRRLPKIRIQTRQRDVLQDKRILVAVDAWPADSRYPAGHYIKTLGSAGDKEVETEVLLHEYDIPWEPFSEKVMACLPPSDWSMTPENTKGRVDLRKLSVMSIDPPGCKDIDDALHCTPLPNGNFAVGVHIADVSYFVQPGSALDEEAANRSTSTYLVQRRLDMLPKLLTETLCSLTSTSDHFAFSVLWELTPNAD----IVSVDFCKSIIRSVASLSYQEAQNIHDDPHA-----QDA-------------------VAQGIRGLNSLAKKLRAKRMEAGALMLASTEVKFVLDADSSDPLDVQMYQLKETHALVEEFMLLANITVGKKILRHYPTLSLLRRHPSPSRERFESLIAAAASRGFSLCVDDSSELQQSLDASVDKD------------DPNINKIIRILATRCMFPAQYFCSGECSQDEWHHYGLAAPIYTHFTSPIRRYADIVVHRLLAASIGVAPLPEALLDKGGMHDLAENMNRRHKAAQNAGRGSTAFHTVLFFKENPVEAEDAYILRILETRLIVLVPRFGIEGTI---DLKGLADQGLLNRQADGHRITCPGK-VELKVFDKIRVGIRVA 567
PR G ++ S L VPVDR++PKI+IQTRQ++ L DKR+LVA+D+WPADS++P GHY++TLG GDKE ET VLL E+DIP + FS++VM CLPP DW +TPEN+ GR DLR L V SIDPP CKDIDDALH LPNGN VGVHIADV++FV PGSALDEEAA+R TSTYLV RRLDMLP LLT LCSLT T DHFAFSVLWEL D ++ V FCKS+IRSVASLSYQ+AQ DDP A QD + GI+ LN++A++LRAKR+EAGAL LAS EV+FVLD ++ +PLDVQMY L++T+ALVEEFMLLANITV KKI+RH+PT S+LRRHP+PS+ +F+ L + A + G L VD S +LQ SLDA+ DK+ +P NK++RI+ TRCM PA YF SGE + E+HHYGLAAPIYTHFTSPIRRYAD+VVHRLLAA+IGVAPLP L +K +H++++ +NRRH AAQ AGR S HTVL+F++ P DA I ++ + VL+PRFGIEG I D D+ ++ H + K ++L+VF+++RV + VA
Sbjct: 433 PRDGALNASGSCLVVPVDRKVPKIKIQTRQQEALMDKRVLVAIDSWPADSKFPLGHYVRTLGVIGDKETETNVLLIEHDIPCDQFSDEVMRCLPPEDWKITPENSTGRRDLRDLPVCSIDPPNCKDIDDALHAQLLPNGNLQVGVHIADVTHFVAPGSALDEEAADRGTSTYLVDRRLDMLPGLLTTKLCSLTDTEDHFAFSVLWELKLVGDNDVQVIDVQFCKSLIRSVASLSYQQAQEFLDDPDAGGVYGQDTKPKKKKKGESDEEFERRQLLGSGIKTLNTIARRLRAKRIEAGALTLASPEVRFVLDTETQNPLDVQMYTLRDTNALVEEFMLLANITVAKKIVRHFPTFSMLRRHPAPSKRQFDLLCSQAKAVGVELHVDTSKQLQDSLDAA-DKEAAGGKRKHGSKANPYFNKLLRIMTTRCMMPASYFSSGEVAPPEFHHYGLAAPIYTHFTSPIRRYADVVVHRLLAAAIGVAPLPSYLENKSHLHEISDQLNRRHHAAQLAGRASVTLHTVLYFQQYPTRT-DAVITKVKNNGVGVLLPRFGIEGMIFLCDKDEQDDEDVVKFDGTSHTLLLVQKNLKLQVFNRVRVKVYVA 1031
BLAST of EWM28885.1 vs. NCBI_GenBank
Match: gi|570313420|gb|ETO61368.1| (hypothetical protein F444_20611, partial [Phytophthora parasitica P1976]) HSP 1 Score: 681.019 bits (1756), Expect = 0.000e+0 Identity = 344/601 (57.24%), Postives = 429/601 (71.38%), Query Frame = 0
Query: 11 PRRGGGGSTVSALFVPVDRRLPKIRIQTRQRDVLQDKRILVAVDAWPADSRYPAGHYIKTLGSAGDKEVETEVLLHEYDIPWEPFSEKVMACLPPSDWSMTPENTKGRVDLRKLSVMSIDPPGCKDIDDALHCTPLPNGNFAVGVHIADVSYFVQPGSALDEEAANRSTSTYLVQRRLDMLPKLLTETLCSLTSTSDHFAFSVLWELTPNAD----IVSVDFCKSIIRSVASLSYQEAQNIHDDPHAQDAVAQ------------------------GIRGLNSLAKKLRAKRMEAGALMLASTEVKFVLDADSSDPLDVQMYQLKETHALVEEFMLLANITVGKKILRHYPTLSLLRRHPSPSRERFESLIAAAASRGFSLCVDDSSELQQSLDASVDKD------------DPNINKIIRILATRCMFPAQYFCSGECSQDEWHHYGLAAPIYTHFTSPIRRYADIVVHRLLAASIGVAPLPEALLDKGGMHDLAENMNRRHKAAQNAGRGSTAFHTVLFFKENPVEAEDAYILRILETRLIVLVPRFGIEGTI---DLKGLADQGLLNRQADGHRITCPGK-VELKVFDKIRVGIRVA 567
PR G ++ S L VPVDR++PKI+IQTRQ++ L DKR+LVA+D+WPADS++P GHY++TLG GDKE ET VLL E+DIP + FS++VM CLPP DW +TPEN+ GR DLR L V SIDPP CKDIDDALH LPNGN VGVHIADV++FV PGSALDEEAA+R TSTYLV RRLDMLP LLT LCSLT T DHFAFSVLWEL D ++ V FCKS+IRSVASLSYQ+AQ DDP A Q GI+ LN++A++LRAKR+EAGAL LAS EV+FVLD ++ +PLDVQMY L++T+ALVEEFMLLANITV KKI+RH+PT S+LRRHP+PS+ +F+ L + A + G L VD S +LQ SLDA+ DK+ +P NK++RI+ TRCM PA YF SGE + E+HHYGLAAPIYTHFTSPIRRYAD+VVHRLLAA+IGVAPLP L +K +H++++ +NRRH AAQ AGR S HTVL+F++ P DA I ++ + VL+PRFGIEG I D D+ ++ H + K ++L+VF+++RV + VA
Sbjct: 434 PRDGALNASGSCLVVPVDRKVPKIKIQTRQQEALMDKRVLVAIDSWPADSKFPLGHYVRTLGVIGDKETETNVLLIEHDIPCDQFSDEVMRCLPPEDWKITPENSTGRRDLRDLPVCSIDPPNCKDIDDALHAQLLPNGNLQVGVHIADVTHFVAPGSALDEEAADRGTSTYLVDRRLDMLPGLLTTKLCSLTDTEDHFAFSVLWELKLVGDNDVQVIDVQFCKSLIRSVASLSYQQAQEFLDDPDAGGVYGQDTKPKKKKKGESDEEFERRQLLGSGIKTLNTIARRLRAKRIEAGALTLASPEVRFVLDTETQNPLDVQMYTLRDTNALVEEFMLLANITVAKKIVRHFPTFSMLRRHPAPSKRQFDLLCSQAKAVGVELHVDTSKQLQDSLDAA-DKEAAGGKRKHGSKANPYFNKLLRIMTTRCMMPASYFSSGEVAPPEFHHYGLAAPIYTHFTSPIRRYADVVVHRLLAAAIGVAPLPSYLENKSHLHEISDQLNRRHHAAQLAGRASVTLHTVLYFQQYPTRT-DAVITKVKNNGVGVLLPRFGIEGMIFLCDKDEQDDEDVVKFDGTSHTLLLVQKNLKLQVFNRVRVKVYVA 1032
BLAST of EWM28885.1 vs. NCBI_GenBank
Match: gi|675177999|ref|XP_008897884.1| (hypothetical protein PPTG_05901 [Phytophthora parasitica INRA-310] >gi|568102092|gb|ETN16774.1| hypothetical protein PPTG_05901 [Phytophthora parasitica INRA-310]) HSP 1 Score: 681.019 bits (1756), Expect = 0.000e+0 Identity = 344/601 (57.24%), Postives = 429/601 (71.38%), Query Frame = 0
Query: 11 PRRGGGGSTVSALFVPVDRRLPKIRIQTRQRDVLQDKRILVAVDAWPADSRYPAGHYIKTLGSAGDKEVETEVLLHEYDIPWEPFSEKVMACLPPSDWSMTPENTKGRVDLRKLSVMSIDPPGCKDIDDALHCTPLPNGNFAVGVHIADVSYFVQPGSALDEEAANRSTSTYLVQRRLDMLPKLLTETLCSLTSTSDHFAFSVLWELTPNAD----IVSVDFCKSIIRSVASLSYQEAQNIHDDPHAQDAVAQ------------------------GIRGLNSLAKKLRAKRMEAGALMLASTEVKFVLDADSSDPLDVQMYQLKETHALVEEFMLLANITVGKKILRHYPTLSLLRRHPSPSRERFESLIAAAASRGFSLCVDDSSELQQSLDASVDKD------------DPNINKIIRILATRCMFPAQYFCSGECSQDEWHHYGLAAPIYTHFTSPIRRYADIVVHRLLAASIGVAPLPEALLDKGGMHDLAENMNRRHKAAQNAGRGSTAFHTVLFFKENPVEAEDAYILRILETRLIVLVPRFGIEGTI---DLKGLADQGLLNRQADGHRITCPGK-VELKVFDKIRVGIRVA 567
PR G ++ S L VPVDR++PKI+IQTRQ++ L DKR+LVA+D+WPADS++P GHY++TLG GDKE ET VLL E+DIP + FS++VM CLPP DW +TPEN+ GR DLR L V SIDPP CKDIDDALH LPNGN VGVHIADV++FV PGSALDEEAA+R TSTYLV RRLDMLP LLT LCSLT T DHFAFSVLWEL D ++ V FCKS+IRSVASLSYQ+AQ DDP A Q GI+ LN++A++LRAKR+EAGAL LAS EV+FVLD ++ +PLDVQMY L++T+ALVEEFMLLANITV KKI+RH+PT S+LRRHP+PS+ +F+ L + A + G L VD S +LQ SLDA+ DK+ +P NK++RI+ TRCM PA YF SGE + E+HHYGLAAPIYTHFTSPIRRYAD+VVHRLLAA+IGVAPLP L +K +H++++ +NRRH AAQ AGR S HTVL+F++ P DA I ++ + VL+PRFGIEG I D D+ ++ H + K ++L+VF+++RV + VA
Sbjct: 433 PRDGALNASGSCLVVPVDRKVPKIKIQTRQQEALMDKRVLVAIDSWPADSKFPLGHYVRTLGVIGDKETETNVLLIEHDIPCDQFSDEVMRCLPPEDWKITPENSTGRRDLRDLPVCSIDPPNCKDIDDALHAQLLPNGNLQVGVHIADVTHFVAPGSALDEEAADRGTSTYLVDRRLDMLPGLLTTKLCSLTDTEDHFAFSVLWELKLVGDNDVQVIDVQFCKSLIRSVASLSYQQAQEFLDDPDAGGVYGQDTKPKKKKKGESDEEFERRQLLGSGIKTLNTIARRLRAKRIEAGALTLASPEVRFVLDTETQNPLDVQMYTLRDTNALVEEFMLLANITVAKKIVRHFPTFSMLRRHPAPSKRQFDLLCSQAKAVGVELHVDTSKQLQDSLDAA-DKEAAGGKRKHGSKANPYFNKLLRIMTTRCMMPASYFSSGEVAPPEFHHYGLAAPIYTHFTSPIRRYADVVVHRLLAAAIGVAPLPSYLENKSHLHEISDQLNRRHHAAQLAGRASVTLHTVLYFQQYPTRT-DAVITKVKNNGVGVLLPRFGIEGMIFLCDKDEQDDEDVVKFDGTSHTLLLVQKNLKLQVFNRVRVKVYVA 1031
BLAST of EWM28885.1 vs. NCBI_GenBank
Match: gi|567975912|gb|ETL26443.1| (hypothetical protein L916_19889, partial [Phytophthora parasitica]) HSP 1 Score: 681.019 bits (1756), Expect = 0.000e+0 Identity = 344/601 (57.24%), Postives = 429/601 (71.38%), Query Frame = 0
Query: 11 PRRGGGGSTVSALFVPVDRRLPKIRIQTRQRDVLQDKRILVAVDAWPADSRYPAGHYIKTLGSAGDKEVETEVLLHEYDIPWEPFSEKVMACLPPSDWSMTPENTKGRVDLRKLSVMSIDPPGCKDIDDALHCTPLPNGNFAVGVHIADVSYFVQPGSALDEEAANRSTSTYLVQRRLDMLPKLLTETLCSLTSTSDHFAFSVLWELTPNAD----IVSVDFCKSIIRSVASLSYQEAQNIHDDPHAQDAVAQ------------------------GIRGLNSLAKKLRAKRMEAGALMLASTEVKFVLDADSSDPLDVQMYQLKETHALVEEFMLLANITVGKKILRHYPTLSLLRRHPSPSRERFESLIAAAASRGFSLCVDDSSELQQSLDASVDKD------------DPNINKIIRILATRCMFPAQYFCSGECSQDEWHHYGLAAPIYTHFTSPIRRYADIVVHRLLAASIGVAPLPEALLDKGGMHDLAENMNRRHKAAQNAGRGSTAFHTVLFFKENPVEAEDAYILRILETRLIVLVPRFGIEGTI---DLKGLADQGLLNRQADGHRITCPGK-VELKVFDKIRVGIRVA 567
PR G ++ S L VPVDR++PKI+IQTRQ++ L DKR+LVA+D+WPADS++P GHY++TLG GDKE ET VLL E+DIP + FS++VM CLPP DW +TPEN+ GR DLR L V SIDPP CKDIDDALH LPNGN VGVHIADV++FV PGSALDEEAA+R TSTYLV RRLDMLP LLT LCSLT T DHFAFSVLWEL D ++ V FCKS+IRSVASLSYQ+AQ DDP A Q GI+ LN++A++LRAKR+EAGAL LAS EV+FVLD ++ +PLDVQMY L++T+ALVEEFMLLANITV KKI+RH+PT S+LRRHP+PS+ +F+ L + A + G L VD S +LQ SLDA+ DK+ +P NK++RI+ TRCM PA YF SGE + E+HHYGLAAPIYTHFTSPIRRYAD+VVHRLLAA+IGVAPLP L +K +H++++ +NRRH AAQ AGR S HTVL+F++ P DA I ++ + VL+PRFGIEG I D D+ ++ H + K ++L+VF+++RV + VA
Sbjct: 434 PRDGALNASGSCLVVPVDRKVPKIKIQTRQQEALMDKRVLVAIDSWPADSKFPLGHYVRTLGVIGDKETETNVLLIEHDIPCDQFSDEVMRCLPPEDWKITPENSTGRRDLRDLPVCSIDPPNCKDIDDALHAQLLPNGNLQVGVHIADVTHFVAPGSALDEEAADRGTSTYLVDRRLDMLPGLLTTKLCSLTDTEDHFAFSVLWELKLVGDNDVQVIDVQFCKSLIRSVASLSYQQAQEFLDDPDAGGVYGQDTKPKKKKKGESDEEFERRQLLGSGIKTLNTIARRLRAKRIEAGALTLASPEVRFVLDTETQNPLDVQMYTLRDTNALVEEFMLLANITVAKKIVRHFPTFSMLRRHPAPSKRQFDLLCSQAKAVGVELHVDTSKQLQDSLDAA-DKEAAGGKRKHGSKANPYFNKLLRIMTTRCMMPASYFSSGEVAPPEFHHYGLAAPIYTHFTSPIRRYADVVVHRLLAAAIGVAPLPSYLENKSHLHEISDQLNRRHHAAQLAGRASVTLHTVLYFQQYPTRT-DAVITKVKNNGVGVLLPRFGIEGMIFLCDKDEQDDEDVVKFDGTSHTLLLVQKNLKLQVFNRVRVKVYVA 1032
BLAST of EWM28885.1 vs. NCBI_GenBank
Match: gi|567947214|gb|ETK73002.1| (hypothetical protein L915_20011, partial [Phytophthora parasitica]) HSP 1 Score: 681.019 bits (1756), Expect = 0.000e+0 Identity = 345/601 (57.40%), Postives = 431/601 (71.71%), Query Frame = 0
Query: 11 PRRGGGGSTVSALFVPVDRRLPKIRIQTRQRDVLQDKRILVAVDAWPADSRYPAGHYIKTLGSAGDKEVETEVLLHEYDIPWEPFSEKVMACLPPSDWSMTPENTKGRVDLRKLSVMSIDPPGCKDIDDALHCTPLPNGNFAVGVHIADVSYFVQPGSALDEEAANRSTSTYLVQRRLDMLPKLLTETLCSLTSTSDHFAFSVLWELTPNAD----IVSVDFCKSIIRSVASLSYQEAQNIHDDPHA-----QDA-------------------VAQGIRGLNSLAKKLRAKRMEAGALMLASTEVKFVLDADSSDPLDVQMYQLKETHALVEEFMLLANITVGKKILRHYPTLSLLRRHPSPSRERFESLIAAAASRGFSLCVDDSSELQQSLDASVDKD------------DPNINKIIRILATRCMFPAQYFCSGECSQDEWHHYGLAAPIYTHFTSPIRRYADIVVHRLLAASIGVAPLPEALLDKGGMHDLAENMNRRHKAAQNAGRGSTAFHTVLFFKENPVEAEDAYILRILETRLIVLVPRFGIEGTI---DLKGLADQGLLNRQADGHRITCPGK-VELKVFDKIRVGIRVA 567
PR G ++ S L VPVDR++PKI+IQTRQ++ L DKR+LVA+D+WPADS++P GHY++TLG GDKE ET VLL E+DIP + FS++VM CLPP DW +TPEN+ GR DLR L V SIDPP CKDIDDALH LPNGN VGVHIADV++FV PGSALDEEAA+R TSTYLV RRLDMLP LLT LCSLT T DHFAFSVLWEL D ++ V FCKS+IRSVASLSYQ+AQ DDP A QD + GI+ LN++A++LRAKR+EAGAL LAS EV+FVLD ++ +PLDVQMY L++T+ALVEEFMLLANITV KKI+RH+PT S+LRRHP+PS+ +F+ L + A + G L VD S +LQ SLDA+ DK+ +P NK++RI+ TRCM PA YF SGE + E+HHYGLAAPIYTHFTSPIRRYAD+VVHRLLAA+IGVAPLP L +K +H++++ +NRRH AAQ AGR S HTVL+F++ P DA I ++ + VL+PRFGIEG I D D+ ++ H + K ++L+VF+++RV + VA
Sbjct: 434 PRDGALNASGSCLVVPVDRKVPKIKIQTRQQEALMDKRVLVAIDSWPADSKFPLGHYVRTLGVIGDKETETNVLLIEHDIPCDQFSDEVMRCLPPEDWKITPENSTGRRDLRDLPVCSIDPPNCKDIDDALHAQLLPNGNLQVGVHIADVTHFVAPGSALDEEAADRGTSTYLVDRRLDMLPGLLTTKLCSLTDTEDHFAFSVLWELKLVGDNDVQVIDVQFCKSLIRSVASLSYQQAQEFLDDPDAGGVYGQDTKPKKKKKGESDEEFERRQLLGSGIKTLNTIARRLRAKRIEAGALTLASPEVRFVLDTETQNPLDVQMYTLRDTNALVEEFMLLANITVAKKIVRHFPTFSMLRRHPAPSKRQFDLLCSQAKAVGVELHVDTSKQLQDSLDAA-DKEAAGGKRKHGSKANPYFNKLLRIMTTRCMMPASYFSSGEVAPPEFHHYGLAAPIYTHFTSPIRRYADVVVHRLLAAAIGVAPLPSYLENKSHLHEISDQLNRRHHAAQLAGRASVTLHTVLYFQQYPTRT-DAVITKVKNNGVGVLLPRFGIEGMIFLCDKDEQDDEDVVKFDGTSHTLLLVQKNLKLQVFNRVRVKVYVA 1032 The following BLAST results are available for this feature:
BLAST of EWM28885.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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