EWM28889.1, cds1783 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28889.1 vs. NCBI_GenBank
Match: gi|585111324|gb|EWM28889.1| (phosphoserine phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 627.476 bits (1617), Expect = 0.000e+0 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
Query: 1 MMRAGQAVGTLTKQAWQTTSGTSLKMTVSLAFIPAFNIHVGAFSRVRYSSRPVKAGFSTYQGLDPDRAKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSFQACAFNFGEYARTSILRNSGDFLKVEVHV 306
MMRAGQAVGTLTKQAWQTTSGTSLKMTVSLAFIPAFNIHVGAFSRVRYSSRPVKAGFSTYQGLDPDRAKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSFQACAFNFGEYARTSILRNSGDFLKVEVHV
Sbjct: 1 MMRAGQAVGTLTKQAWQTTSGTSLKMTVSLAFIPAFNIHVGAFSRVRYSSRPVKAGFSTYQGLDPDRAKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSFQACAFNFGEYARTSILRNSGDFLKVEVHV 306
BLAST of EWM28889.1 vs. NCBI_GenBank
Match: gi|585111325|gb|EWM28890.1| (phosphoserine phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0 Identity = 304/306 (99.35%), Postives = 305/306 (99.67%), Query Frame = 0
Query: 1 MMRAGQAVGTLTKQAWQTTSGTSLKMTVSLAFIPAFNIHVGAFSRVRYSSRPVKAGFSTYQGLDPDRAKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSFQACAFNFGEYARTSILRNSGDFLKVEVHV 306
MMRAGQAVGTLTKQAWQTTSGTSLKMTVSLAFIPAFNIHVGAFSRVRYSSRPVKAGFSTYQGLDPDRAKDVLKKAQ +CFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSFQACAFNFGEYARTSILRNSGDFLKVEVHV
Sbjct: 1 MMRAGQAVGTLTKQAWQTTSGTSLKMTVSLAFIPAFNIHVGAFSRVRYSSRPVKAGFSTYQGLDPDRAKDVLKKAQAVCFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSFQACAFNFGEYARTSILRNSGDFLKVEVHV 306
BLAST of EWM28889.1 vs. NCBI_GenBank
Match: gi|298708195|emb|CBJ30534.1| (Phosphoserine phosphatase [Ectocarpus siliculosus]) HSP 1 Score: 277.715 bits (709), Expect = 2.648e-89 Identity = 141/229 (61.57%), Postives = 166/229 (72.49%), Query Frame = 0
Query: 56 GFSTYQGLDPDRAKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAEN-------GSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSF 277
G +GLD + AK L++AQ +CFDVDSTV AEEGIDVLA F G +AVADLT++AMGGS+ FQDALK RLDL+ PS+ + CL HP LSPG+ E V L RG VYLVSGGFR MI PVAD+L +PR I+AN LLF + G+Y FD +EPTSRDGGKA VI L ++ GY+ V+MVGDGATDMQA+PPADAFIGYGGV VR V +GADWFV F
Sbjct: 53 GAGPQEGLDVEGAKAALRRAQAVCFDVDSTVIAEEGIDVLADFCGAAEAVADLTSRAMGGSMPFQDALKARLDLMTPSQKVVDLCLREHPPRLSPGISELVSALHERGVVVYLVSGGFRQMIAPVADQLSIPRGNIFANRLLFGDESSDGATAGAYVGFDTDEPTSRDGGKAKVIDLLSKEFGYKCVVMVGDGATDMQAKPPADAFIGYGGVTVRKSVRKGADWFVTDF 281
BLAST of EWM28889.1 vs. NCBI_GenBank
Match: gi|673017156|ref|XP_008862539.1| (phosphoserine phosphatase SerB [Aphanomyces invadans] >gi|574481742|gb|ETW08734.1| phosphoserine phosphatase SerB [Aphanomyces invadans]) HSP 1 Score: 270.781 bits (691), Expect = 2.049e-87 Identity = 129/210 (61.43%), Postives = 153/210 (72.86%), Query Frame = 0
Query: 68 AKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSF 277
A + K AQ +CFDVDSTVC+EEGIDVLAA GQGQ VA T KAM G V F+DAL RLD+IKPSR DI +CL HP L+PG++ + L AR VY VSGGFRLMI P+ADRL VP ++ANT+ F NG Y FD E TSRDGGK V++ LK+ HGY+ V+MVGDG TDMQA+PPAD F+G+GGVV RD V + ADWFV+ F
Sbjct: 32 AAAIWKSAQAVCFDVDSTVCSEEGIDVLAAHCGQGQRVAAWTTKAMNGGVKFEDALAARLDIIKPSRKDIADCLRVHPPQLTPGIESLISGLHARNIHVYFVSGGFRLMIAPIADRLHVPSTNVFANTIHFDANGYYAGFDDTEMTSRDGGKPRVLEMLKKAHGYKTVVMVGDGVTDMQAKPPADLFVGFGGVVERDVVKKNADWFVKDF 241
BLAST of EWM28889.1 vs. NCBI_GenBank
Match: gi|698777060|ref|XP_009821574.1| (phosphoserine phosphatase SerB [Aphanomyces astaci] >gi|574123699|gb|ETV89174.1| phosphoserine phosphatase SerB [Aphanomyces astaci]) HSP 1 Score: 267.314 bits (682), Expect = 5.511e-86 Identity = 131/235 (55.74%), Postives = 164/235 (69.79%), Query Frame = 0
Query: 43 FSRVRYSSRPVKAGFSTYQGLDPDRAKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSF 277
+ R +S P K ++ L + + ++AQ +CFDVDSTVC+EEGIDVLAA GQG+ VA T KAM G V F+DAL RLD+IKPS+ DI +CL HP L+PG++ + L AR VY VSGGFRLMI PVADRL VP I+ANT+ F +G+Y FD E TSRDGGK V+ LK++HGY+ V+MVGDG TDMQA+PPAD F+G+GGVV RD V + ADWFV+ F
Sbjct: 10 LATTRVTSMP-KGTLKQHRHLSSAASVAIWREAQAVCFDVDSTVCSEEGIDVLAAHCGQGERVAAWTTKAMNGGVKFEDALAARLDIIKPSQKDIADCLRVHPPQLTPGIEALIKGLHARDVHVYFVSGGFRLMIAPVADRLNVPSANIFANTIHFNASGAYAGFDDTEMTSRDGGKPRVLDMLKQQHGYKTVVMVGDGVTDMQAKPPADLFVGFGGVVERDVVKKHADWFVKDF 243
BLAST of EWM28889.1 vs. NCBI_GenBank
Match: gi|970657480|gb|KUF95356.1| (hypothetical protein AM588_10010012 [Phytophthora nicotianae]) HSP 1 Score: 265.003 bits (676), Expect = 5.262e-85 Identity = 123/213 (57.75%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 65 PDRAKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSF 277
P+ A D+ +CFDVDSTVC +EGIDVLA G GQAV + T KAM G+V F+DAL RLD+IKPSR DIQ+CL +HP +PG+K+ + LQ +G AV+LVSGGFRLMIEPVA+ + +P IYANT+ F ++G+Y FD E TSRDGGKA I+ +K HG++ + MVGDG TD+QARPPAD F+G+GG+V RD V +GAD FV F
Sbjct: 34 PETASDIWCSVGAVCFDVDSTVCEDEGIDVLAEHCGAGQAVKEWTTKAMNGNVKFEDALAARLDIIKPSRQDIQDCLKQHPPKFTPGIKKLMATLQDKGIAVFLVSGGFRLMIEPVAEEVGIPLSSIYANTIFFDDDGNYSGFDDAELTSRDGGKAKAIEVIKRIHGFEKIAMVGDGVTDLQARPPADLFVGFGGIVTRDVVKEGADLFVTDF 246
BLAST of EWM28889.1 vs. NCBI_GenBank
Match: gi|675203009|ref|XP_008910389.1| (phosphoserine phosphatase SerB [Phytophthora parasitica INRA-310] >gi|567954232|gb|ETK79870.1| phosphoserine phosphatase SerB [Phytophthora parasitica] >gi|567982886|gb|ETL33289.1| phosphoserine phosphatase SerB [Phytophthora parasitica] >gi|568012400|gb|ETL86578.1| phosphoserine phosphatase SerB [Phytophthora parasitica] >gi|568089620|gb|ETN04462.1| phosphoserine phosphatase SerB [Phytophthora parasitica INRA-310] >gi|570320480|gb|ETO68428.1| phosphoserine phosphatase SerB [Phytophthora parasitica P1976] >gi|570944301|gb|ETP09558.1| phosphoserine phosphatase SerB [Phytophthora parasitica CJ01A1] >gi|570975720|gb|ETP37658.1| phosphoserine phosphatase SerB [Phytophthora parasitica P10297]) HSP 1 Score: 265.003 bits (676), Expect = 6.702e-85 Identity = 123/213 (57.75%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 65 PDRAKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSF 277
P+ A D+ +CFDVDSTVC +EGIDVLA G GQAV + T KAM G+V F+DAL RLD+IKPSR DIQ+CL +HP +PG+K+ + LQ +G AV+LVSGGFRLMIEPVA+ + +P IYANT+ F ++G+Y FD E TSRDGGKA I+ +K HG++ + MVGDG TD+QARPPAD F+G+GG+V RD V +GAD FV F
Sbjct: 43 PETASDIWCSVGAVCFDVDSTVCEDEGIDVLAEHCGAGQAVKEWTTKAMNGNVKFEDALAARLDIIKPSRQDIQDCLKQHPPKFTPGIKKLMATLQDKGIAVFLVSGGFRLMIEPVAEEVGIPLSSIYANTIFFDDDGNYSGFDDAELTSRDGGKAKAIEVIKRIHGFEKIAMVGDGVTDLQARPPADLFVGFGGIVTRDVVKEGADLFVTDF 255
BLAST of EWM28889.1 vs. NCBI_GenBank
Match: gi|566016857|gb|ETI39768.1| (phosphoserine phosphatase SerB [Phytophthora parasitica P1569] >gi|568042410|gb|ETM39740.1| phosphoserine phosphatase SerB [Phytophthora parasitica]) HSP 1 Score: 265.003 bits (676), Expect = 7.638e-85 Identity = 123/213 (57.75%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 65 PDRAKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSF 277
P+ A D+ +CFDVDSTVC +EGIDVLA G GQAV + T KAM G+V F+DAL RLD+IKPSR DIQ+CL +HP +PG+K+ + LQ +G AV+LVSGGFRLMIEPVA+ + +P IYANT+ F ++G+Y FD E TSRDGGKA I+ +K HG++ + MVGDG TD+QARPPAD F+G+GG+V RD V +GAD FV F
Sbjct: 43 PETASDIWCSVGAVCFDVDSTVCEDEGIDVLAEHCGAGQAVKEWTTKAMNGNVKFEDALAARLDIIKPSRQDIQDCLKQHPPKFTPGIKKLMATLQDKGIAVFLVSGGFRLMIEPVAEEVGIPLSSIYANTIFFDDDGNYSGFDDAELTSRDGGKAKAIEVIKRIHGFEKIAMVGDGVTDLQARPPADLFVGFGGIVTRDVVKEGADLFVMDF 255
BLAST of EWM28889.1 vs. NCBI_GenBank
Match: gi|675203011|ref|XP_008910390.1| (phosphoserine phosphatase SerB, variant [Phytophthora parasitica INRA-310] >gi|567954233|gb|ETK79871.1| phosphoserine phosphatase SerB, variant [Phytophthora parasitica] >gi|567982887|gb|ETL33290.1| phosphoserine phosphatase SerB, variant [Phytophthora parasitica] >gi|568012401|gb|ETL86579.1| phosphoserine phosphatase SerB, variant [Phytophthora parasitica] >gi|568089621|gb|ETN04463.1| phosphoserine phosphatase SerB, variant [Phytophthora parasitica INRA-310] >gi|570320481|gb|ETO68429.1| phosphoserine phosphatase SerB, variant [Phytophthora parasitica P1976] >gi|570944302|gb|ETP09559.1| phosphoserine phosphatase SerB, variant [Phytophthora parasitica CJ01A1] >gi|570975721|gb|ETP37659.1| phosphoserine phosphatase SerB, variant [Phytophthora parasitica P10297] >gi|970635227|gb|KUF80190.1| Phosphoserine phosphatase [Phytophthora nicotianae]) HSP 1 Score: 264.233 bits (674), Expect = 9.895e-85 Identity = 123/213 (57.75%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 65 PDRAKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSF 277
P+ A D+ +CFDVDSTVC +EGIDVLA G GQAV + T KAM G+V F+DAL RLD+IKPSR DIQ+CL +HP +PG+K+ + LQ +G AV+LVSGGFRLMIEPVA+ + +P IYANT+ F ++G+Y FD E TSRDGGKA I+ +K HG++ + MVGDG TD+QARPPAD F+G+GG+V RD V +GAD FV F
Sbjct: 33 PETASDIWCSVGAVCFDVDSTVCEDEGIDVLAEHCGAGQAVKEWTTKAMNGNVKFEDALAARLDIIKPSRQDIQDCLKQHPPKFTPGIKKLMATLQDKGIAVFLVSGGFRLMIEPVAEEVGIPLSSIYANTIFFDDDGNYSGFDDAELTSRDGGKAKAIEVIKRIHGFEKIAMVGDGVTDLQARPPADLFVGFGGIVTRDVVKEGADLFVTDF 245
BLAST of EWM28889.1 vs. NCBI_GenBank
Match: gi|566016858|gb|ETI39769.1| (phosphoserine phosphatase SerB, variant [Phytophthora parasitica P1569] >gi|568042411|gb|ETM39741.1| phosphoserine phosphatase SerB, variant [Phytophthora parasitica]) HSP 1 Score: 263.848 bits (673), Expect = 1.204e-84 Identity = 123/213 (57.75%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 65 PDRAKDVLKKAQVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEFVGRLQARGTAVYLVSGGFRLMIEPVADRLLVPRDRIYANTLLFAENGSYKDFDPNEPTSRDGGKAAVIKSLKEKHGYQDVLMVGDGATDMQARPPADAFIGYGGVVVRDPVLQGADWFVRSF 277
P+ A D+ +CFDVDSTVC +EGIDVLA G GQAV + T KAM G+V F+DAL RLD+IKPSR DIQ+CL +HP +PG+K+ + LQ +G AV+LVSGGFRLMIEPVA+ + +P IYANT+ F ++G+Y FD E TSRDGGKA I+ +K HG++ + MVGDG TD+QARPPAD F+G+GG+V RD V +GAD FV F
Sbjct: 33 PETASDIWCSVGAVCFDVDSTVCEDEGIDVLAEHCGAGQAVKEWTTKAMNGNVKFEDALAARLDIIKPSRQDIQDCLKQHPPKFTPGIKKLMATLQDKGIAVFLVSGGFRLMIEPVAEEVGIPLSSIYANTIFFDDDGNYSGFDDAELTSRDGGKAKAIEVIKRIHGFEKIAMVGDGVTDLQARPPADLFVGFGGIVTRDVVKEGADLFVMDF 245 The following BLAST results are available for this feature:
BLAST of EWM28889.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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