EWM28895.1, cds1778 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28895.1 vs. NCBI_GenBank
Match: gi|585111333|gb|EWM28895.1| (GRAM domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 1620.91 bits (4196), Expect = 0.000e+0 Identity = 804/804 (100.00%), Postives = 804/804 (100.00%), Query Frame = 0
Query: 1 MSPRPVGEDSAFSPRAGLFWQDHGGSSGLGEDGVCFPLPDRWEGGKEEGEEGREEESLMMTTAMLPPTPSAVSAVVAASRFLHRREEMQEGGREGGREGGREGGRGLDDTMALEAVREELSVKALVSSAGTPRKGENFPAEEEELSTSHPPSRLKEGEDEGGGEDAGETVREGGEEGKEEDLSSVEEIKPFNLPAGERLLKSYSCALLPNNLLIHGRLYVTPHYLCFGSWGSTRIVLAMREVSFIEKANTMGFVPNALWVVMRETGDRYFFSSFIYRDDCFDTIFSLLTKRLVGLEAPLGGTPAALLEHGKKKKKKKMARMTPSLGKNVRWGPEVRHEGVDAGRREQEGAREGGEEATTKKVKPVLSTLATQEKNADSLLSIPDGDGACAVKPPSAMAAVAVSRQPLPPLTLEDDAIIQRMTILTDEELACGVSKFLASFWGAGSERGREGGGEGGREGGREGGKGDFYQSYLEARGDNEVRVGGWEGREEQDAYSGESFVHVRDVFYSRVRDGRGIGPKTVPTRECQMYRVEGEGGGEDGGEGREEDRVFFSTALTFTGVPYGEYFHVQTRWVVTRVGVHGDRCRLQIGVEVVFRQTVFLKAAIQAATIAETKKTLQDWLARAKARVQEMKGEAIRDAKLMRDGKGGKEGESEGGKEDGGKEIEGTLAERNATGAGEVESALLEDQRGEEETMRPFSRQHTPREEEEEGRKPSLEHGSCQSCFFCRLAPSLTFKGLPALLFLVLLVVLLLLFVALVLLIFQVQRLSNRLESLQDAVSKDSCVYKERAYPHVCLRKIKLNLFNV 804
MSPRPVGEDSAFSPRAGLFWQDHGGSSGLGEDGVCFPLPDRWEGGKEEGEEGREEESLMMTTAMLPPTPSAVSAVVAASRFLHRREEMQEGGREGGREGGREGGRGLDDTMALEAVREELSVKALVSSAGTPRKGENFPAEEEELSTSHPPSRLKEGEDEGGGEDAGETVREGGEEGKEEDLSSVEEIKPFNLPAGERLLKSYSCALLPNNLLIHGRLYVTPHYLCFGSWGSTRIVLAMREVSFIEKANTMGFVPNALWVVMRETGDRYFFSSFIYRDDCFDTIFSLLTKRLVGLEAPLGGTPAALLEHGKKKKKKKMARMTPSLGKNVRWGPEVRHEGVDAGRREQEGAREGGEEATTKKVKPVLSTLATQEKNADSLLSIPDGDGACAVKPPSAMAAVAVSRQPLPPLTLEDDAIIQRMTILTDEELACGVSKFLASFWGAGSERGREGGGEGGREGGREGGKGDFYQSYLEARGDNEVRVGGWEGREEQDAYSGESFVHVRDVFYSRVRDGRGIGPKTVPTRECQMYRVEGEGGGEDGGEGREEDRVFFSTALTFTGVPYGEYFHVQTRWVVTRVGVHGDRCRLQIGVEVVFRQTVFLKAAIQAATIAETKKTLQDWLARAKARVQEMKGEAIRDAKLMRDGKGGKEGESEGGKEDGGKEIEGTLAERNATGAGEVESALLEDQRGEEETMRPFSRQHTPREEEEEGRKPSLEHGSCQSCFFCRLAPSLTFKGLPALLFLVLLVVLLLLFVALVLLIFQVQRLSNRLESLQDAVSKDSCVYKERAYPHVCLRKIKLNLFNV
Sbjct: 1 MSPRPVGEDSAFSPRAGLFWQDHGGSSGLGEDGVCFPLPDRWEGGKEEGEEGREEESLMMTTAMLPPTPSAVSAVVAASRFLHRREEMQEGGREGGREGGREGGRGLDDTMALEAVREELSVKALVSSAGTPRKGENFPAEEEELSTSHPPSRLKEGEDEGGGEDAGETVREGGEEGKEEDLSSVEEIKPFNLPAGERLLKSYSCALLPNNLLIHGRLYVTPHYLCFGSWGSTRIVLAMREVSFIEKANTMGFVPNALWVVMRETGDRYFFSSFIYRDDCFDTIFSLLTKRLVGLEAPLGGTPAALLEHGKKKKKKKMARMTPSLGKNVRWGPEVRHEGVDAGRREQEGAREGGEEATTKKVKPVLSTLATQEKNADSLLSIPDGDGACAVKPPSAMAAVAVSRQPLPPLTLEDDAIIQRMTILTDEELACGVSKFLASFWGAGSERGREGGGEGGREGGREGGKGDFYQSYLEARGDNEVRVGGWEGREEQDAYSGESFVHVRDVFYSRVRDGRGIGPKTVPTRECQMYRVEGEGGGEDGGEGREEDRVFFSTALTFTGVPYGEYFHVQTRWVVTRVGVHGDRCRLQIGVEVVFRQTVFLKAAIQAATIAETKKTLQDWLARAKARVQEMKGEAIRDAKLMRDGKGGKEGESEGGKEDGGKEIEGTLAERNATGAGEVESALLEDQRGEEETMRPFSRQHTPREEEEEGRKPSLEHGSCQSCFFCRLAPSLTFKGLPALLFLVLLVVLLLLFVALVLLIFQVQRLSNRLESLQDAVSKDSCVYKERAYPHVCLRKIKLNLFNV 804
BLAST of EWM28895.1 vs. NCBI_GenBank
Match: gi|695375637|ref|XP_009515590.1| (hypothetical protein PHYSODRAFT_309216 [Phytophthora sojae] >gi|348688501|gb|EGZ28315.1| hypothetical protein PHYSODRAFT_309216 [Phytophthora sojae]) HSP 1 Score: 154.451 bits (389), Expect = 8.835e-35 Identity = 125/480 (26.04%), Postives = 210/480 (43.75%), Query Frame = 0
Query: 164 EDAGETVREGGEEGKEEDLSSVEEIKPFNLPAGERLLKSYSCALLPNNLLIHGRLYVTPHYLCFGSWGSTRIVLAMREVSFIEKANTMGFVPNALWVVMRETGDRYFFSSFIYRDDCFDTIFSLLTKRLVGLEAPLGGTPAALLEHGKKKKKKKMARMTPSLGKNVRWGPEVRHEGVDAGRREQEGA---REGGEEATTKKVKPVLSTLATQEKNADSLLSIPDGDGACAVKPPSAMAA-VAVSRQPLPPLTLEDDAIIQRMTILTDEELACGVSKFLASFWGAGSERGREGGGEGGREGGREGGKGDFYQSYLEARGDNEVRVGGWEGREEQDAYSG----ESFVHVRDVFYSRVRDGRGIGPKTVPTRECQMYRVEGEGGGEDGGEGREEDRVFFSTALTFTGVPYGEYFHVQTRWVVTRVGVHGDRCRLQIGVEVVFRQTVFLKAAIQAATIAETKKTLQDWL-ARAKARVQEMKGE 634
E AG + + E + + L + K F L + E++++S+SCAL +N HGRLY+T +CF W T V + E+S +EK NT VPNA+ ++ G++ FF+SF++RD+CF +I L + + + T +L + PE D G +G R +E P ++ A + +IP D +PPS++A+ +A R PP+ E DA++ ++ DEE+A V + W F +S L+ G + + W ++ +Y+ +SF R V Y+ + +GP +PT + Q Y G R+ ST + VPY +YF V+ RWV + G C +Q+G+ + + ++ +LK I++ T++E K ++ WL A A+A Q+ E
Sbjct: 784 ESAGSGMEQDEEFTEAQPLGVSDFQKKFKLDSPEQVVESFSCALYLSNFPFHGRLYLTRDRMCFSGWRDTIFVASFSEISLMEKKNTALIVPNAIEFTVK--GEKVFFTSFVFRDECFQSIQQL----------------------------RSIKKETEALMSDPAKQPEAASVDTD-GSSPPDGDSRRRRSSDEVAAVAPSPEMTPSAATD-------TIPAEDS----RPPSSLASEIAAVR--APPVIPEKDALLSEFDLMLDEEVAFSVDTAYSKLWVESDA---------------------FARSILDTAGSTNLSMPPW--KKTTVSYTAVSKPDSFDGSRLVTYTHNK-KYMVGPSVIPTAQTQRY------AYTPGS------RLVVSTTTCVSDVPYCDYFRVEHRWVFSATKNQG-ACLVQVGLRIQWSKSTWLKKQIESTTVSEAKDAVKSWLNAAAEATKQQPAAE 1182
BLAST of EWM28895.1 vs. NCBI_GenBank
Match: gi|953486110|emb|CEG50288.1| (Uncharacterized conserved protein, contains GRAM domain [Plasmopara halstedii]) HSP 1 Score: 117.472 bits (293), Expect = 3.201e-23 Identity = 106/438 (24.20%), Postives = 180/438 (41.10%), Query Frame = 0
Query: 197 ERLLKSYSCALLPNNLLIHGRLYVTPHYLCFGSWGSTRIVLAMREVSFIEKANTMGFVPNALWVVMRETGDRYFFSSFIYRDDCFDTIFSLLTKRLVGLEAPLGGTPAALLEHGKKKKKKKMARMTPSLGKNVRWGPEVRHEGVDAGRREQEGAREGGEEATTKKVKPVLSTLATQEKNADSLLSIPDGDGACAVKPPSAMAAVAVSRQPLPPLTLEDDAIIQRMTILTDEELACGVSKFLASFWGAGSERGREGGGEGGREGGREGGKGDFYQSYLEARGDNEVRVGGWEGRE-------EQDAYSGE---SFVHVRDVFYSRVRDGRGIGPKTVPTRECQMYRVEGEGGGEDGGEGREEDRVFFSTALTFTGVPYGEYFHVQTRWVVTRVGVHGDRCRLQIGVEVVFRQTVFLKAAIQAATIAETKKTLQDWLARA 624
+++++SY+CAL +N HGRLY+T + F W T + E++ +EK NT VPNA+ +R G++ FF+SF++RD+C+ +I L KK+ + M TP E +D R+ +G E K L+ +A K A + + +G P S + +A P+ P E D + +L +EE+ V FW + RE L+A G + + W + + D + G S+VH + IGP +PT + Q Y R+ +R+ ST + + VPY +YF V+ RWV + + + Q+G+ + + ++ +LK I+ T++E K+ ++ WL A
Sbjct: 803 DQVVESYTCALYFSNFPFHGRLYLTKDRMHFSGWRDTLFTASFSEIAAMEKKNTALIVPNAIEFTVR--GEKVFFASFVFRDECYQSI--------------------QQLRSMKKETEVLMLDPTP--------------ESLDLDRK---LFNDG--ELIRKSSSHDLAAVAPIPKKASAETTSVEGSRL----PLSVSSTLAA--HPVIP---EKDDFLDEFDLLLNEEVPFSVDTAFTRFWIESNTFSRE---------------------ILDAAGATNISLPDWTKQSVAYAAVTKLDTFDGSRLVSYVHNKKYM---------IGPSVIPTAQIQRYSY------------RKGNRLIVSTTTSVSDVPYCDYFRVEHRWVFSAMNKPSESLA-QVGLRIQWLKSTWLKKQIENTTVSEAKEAVKAWLDAA 1147
BLAST of EWM28895.1 vs. NCBI_GenBank
Match: gi|1141975103|gb|ONK56329.1| (uncharacterized protein A4U43_C10F6890 [Asparagus officinalis]) HSP 1 Score: 110.538 bits (275), Expect = 1.801e-21 Identity = 113/490 (23.06%), Postives = 203/490 (41.43%), Query Frame = 0
Query: 191 FNLPAGERLLKSYSCALLPNNLLIHGRLYVTPHYLCFGS--WG-STRIVLAMREVSFIEKANTMGFVPNALWVVMRETGDR-YFFSSFIYRDDCFDTIFSLLTKRLVGLEAPLGGTPAALLEHGKKKKKKK-------MARMTPSLGKNVRWGPEVRHEGVDAGRREQEGAREGGEEATTKKVKPVLSTLATQEKNADSLLSIPDGDGACAVKPPSAMAAVAVSRQPLPPLTLEDDA--IIQRMTILTDEELACGVSKFLASFWGAGSERGREGGGEGGREGGREGGKGDFYQSYLEARGDNEVRVGGWEGREEQDAYSGESFVHVRDVFYSRVRDGRGIGPKTVPTRECQMYRVEGEGGGEDGGEGREEDRVFFSTALTFTGVPYGEYFHVQTRWVVTRVGVHGDRCRLQIGVEVVFRQTVFLKAAIQAATIAETKKTLQDWLARAKARVQE-----MKGEAIRDAKLMRD---GKGGKEGESEGGKED 659
F LP E L++ ++CA N+L+ G +Y+ H++CF S +G T+ +A EV+++ KA T PNA+ ++ TGD+ +FF SF+ RD+ + + +V A ALL+H + K + + R+T S E +DA A + ++K K +L+ + + + + + +G A + PPS+ P + E DA I + T++ + + V +F F + +F ++ + GD + W E+ SF+H +V+ IG K +E Q YRV + + T+ + VP+ +YFHV+ W V ++ + C +++ V F + K I+ +T E ++ W+ A +++ KG A R+A +++D G G G EG E+
Sbjct: 51 FRLPKDEVLVQDFNCAF-QENILLQGHMYLFIHHICFYSNIFGFETKKTIAFHEVTYVRKAKTAAIFPNAIEII---TGDKKHFFGSFLSRDEAY--------RLIVDGWAQHNDDSRALLDHQESKSENNQDNDIVVVERVTGST------------EFIDAS----SSAERTKDANASEKCKLLLNGNSESKASENFQENQENGKHANSDNPPSSE----------PSICEELDAPEIPENFTLVIEAKFPVTVEEFFTLFISDNA--------------------SNFLENVHQRCGDKDFLSTPWRPHEKFGHARDLSFLHPVNVY---------IGAKFGRCQEVQKYRV------------FKNSHLVIETSQQVSDVPFADYFHVKRIWDVEKIAEEENSCIMRVYFNVAFSKKTMFKGKIEQSTKDELREVHAIWINNAHELLKQKNEVKQKGIADRNADMIQDQNEGAGSSSGH-EGSAEN 460
BLAST of EWM28895.1 vs. NCBI_GenBank
Match: gi|1150746274|ref|XP_020247271.1| (protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X2 [Asparagus officinalis]) HSP 1 Score: 108.612 bits (270), Expect = 5.029e-21 Identity = 114/500 (22.80%), Postives = 207/500 (41.40%), Query Frame = 0
Query: 191 FNLPAGERLLKSYSCALLPNNLLIHGRLYVTPHYLCFGS--WG-STRIVLAMREVSFIEKANTMGFVPNALWVVMRETGDR-YFFSSFIYRDDCFDTIFSLLTKRLVGLEAPLGGTPAALLEHGKKKKKKK-------MARMTPSLGKNVRWGPEVRHEGVDAGRREQEGAREGGEEATTKKVKPVLSTLATQEKNADSLLSIPDGDGACAVKPPSAMAAVAVSRQPLPPLTLEDDA--IIQRMTILTDEELACGVSKFLASFWGAGSERGREGGGEGGREGGREGGKGDFYQSYLEARGDNEVRVGGWEGREEQDAYSGESFVHVRDVFYSRVRDGRGIGPKTVPTRECQMYRVEGEGGGEDGGEGREEDRVFFSTALTFTGVPYGEYFHVQTRWVVTRVGVHGDRCRLQIGVEVVFRQTVFLKAAIQAATIAETKKTLQDWLARAKARVQE-----MKGEAIRDAKLMRD---GKGGKEGESEGGKEDGGKEIEGTLA 669
F LP E L++ ++CA N+L+ G +Y+ H++CF S +G T+ +A EV+++ KA T PNA+ ++ TGD+ +FF SF+ RD+ + + +V A ALL+H + K + + R+T S E +DA A + ++K K +L+ + + + + + +G A + PPS+ P + E DA I + T++ + + V +F F + +F ++ + GD + W E+ SF+H +V+ IG K +E Q YRV + + T+ + VP+ +YFHV+ W V ++ + C +++ V F + K I+ +T E ++ W+ A +++ KG A R+A +++D G G G EG E+ + ++A
Sbjct: 51 FRLPKDEVLVQDFNCAF-QENILLQGHMYLFIHHICFYSNIFGFETKKTIAFHEVTYVRKAKTAAIFPNAIEII---TGDKKHFFGSFLSRDEAY--------RLIVDGWAQHNDDSRALLDHQESKSENNQDNDIVVVERVTGST------------EFIDAS----SSAERTKDANASEKCKLLLNGNSESKASENFQENQENGKHANSDNPPSSE----------PSICEELDAPEIPENFTLVIEAKFPVTVEEFFTLFISDNA--------------------SNFLENVHQRCGDKDFLSTPWRPHEKFGHARDLSFLHPVNVY---------IGAKFGRCQEVQKYRV------------FKNSHLVIETSQQVSDVPFADYFHVKRIWDVEKIAEEENSCIMRVYFNVAFSKKTMFKGKIEQSTKDELREVHAIWINNAHELLKQKNEVKQKGIADRNADMIQDQNEGAGSSSGH-EGSAENLRPTVNPSVA 470
BLAST of EWM28895.1 vs. NCBI_GenBank
Match: gi|1150746272|ref|XP_020247269.1| (protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X1 [Asparagus officinalis]) HSP 1 Score: 108.997 bits (271), Expect = 5.477e-21 Identity = 113/490 (23.06%), Postives = 203/490 (41.43%), Query Frame = 0
Query: 191 FNLPAGERLLKSYSCALLPNNLLIHGRLYVTPHYLCFGS--WG-STRIVLAMREVSFIEKANTMGFVPNALWVVMRETGDR-YFFSSFIYRDDCFDTIFSLLTKRLVGLEAPLGGTPAALLEHGKKKKKKK-------MARMTPSLGKNVRWGPEVRHEGVDAGRREQEGAREGGEEATTKKVKPVLSTLATQEKNADSLLSIPDGDGACAVKPPSAMAAVAVSRQPLPPLTLEDDA--IIQRMTILTDEELACGVSKFLASFWGAGSERGREGGGEGGREGGREGGKGDFYQSYLEARGDNEVRVGGWEGREEQDAYSGESFVHVRDVFYSRVRDGRGIGPKTVPTRECQMYRVEGEGGGEDGGEGREEDRVFFSTALTFTGVPYGEYFHVQTRWVVTRVGVHGDRCRLQIGVEVVFRQTVFLKAAIQAATIAETKKTLQDWLARAKARVQE-----MKGEAIRDAKLMRD---GKGGKEGESEGGKED 659
F LP E L++ ++CA N+L+ G +Y+ H++CF S +G T+ +A EV+++ KA T PNA+ ++ TGD+ +FF SF+ RD+ + + +V A ALL+H + K + + R+T S E +DA A + ++K K +L+ + + + + + +G A + PPS+ P + E DA I + T++ + + V +F F + +F ++ + GD + W E+ SF+H +V+ IG K +E Q YRV + + T+ + VP+ +YFHV+ W V ++ + C +++ V F + K I+ +T E ++ W+ A +++ KG A R+A +++D G G G EG E+
Sbjct: 51 FRLPKDEVLVQDFNCAF-QENILLQGHMYLFIHHICFYSNIFGFETKKTIAFHEVTYVRKAKTAAIFPNAIEII---TGDKKHFFGSFLSRDEAY--------RLIVDGWAQHNDDSRALLDHQESKSENNQDNDIVVVERVTGST------------EFIDAS----SSAERTKDANASEKCKLLLNGNSESKASENFQENQENGKHANSDNPPSSE----------PSICEELDAPEIPENFTLVIEAKFPVTVEEFFTLFISDNA--------------------SNFLENVHQRCGDKDFLSTPWRPHEKFGHARDLSFLHPVNVY---------IGAKFGRCQEVQKYRV------------FKNSHLVIETSQQVSDVPFADYFHVKRIWDVEKIAEEENSCIMRVYFNVAFSKKTMFKGKIEQSTKDELREVHAIWINNAHELLKQKNEVKQKGIADRNADMIQDQNEGAGSSSGH-EGSAEN 460
BLAST of EWM28895.1 vs. NCBI_GenBank
Match: gi|727651920|ref|XP_010496680.1| (PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X1 [Camelina sativa] >gi|727651922|ref|XP_010496681.1| PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X2 [Camelina sativa]) HSP 1 Score: 104.375 bits (259), Expect = 1.726e-19 Identity = 119/535 (22.24%), Postives = 213/535 (39.81%), Query Frame = 0
Query: 124 ALVSSAGTPRKGENFPAEEEELSTSHPPSRLKEGEDEGGGEDAGETVRE--------GGEEGKEEDLSSVEEIKP-FNLPAGERLLKSYSCALLPNNLLIHGRLYVTPHYLCFGS--WG-STRIVLAMREVSFIEKANTMGFVPNALWVVMRETGDRYFFSSFIYRDDCFDTIFSLLTKRLVGLEAPLGGTPAALLEHGKKKKKKKMARMTPSLGKNVRWGPEVRHEGVDAGRREQEGAREGGEEATTKKVKPVLSTLATQEKNADSLLSIPDGDGACAVKPPSAMAAVAVSRQPLPPLTLEDDAIIQRMTILTDEELACGVSKFLASFWGAGSERGREGGGEGGREGGREGGKGDFYQSYLEARGDNEVRVGGWEGREEQDAYSGESFVHVRDVFYSRVRDGRGIGPKTVPTRECQMYRVEGEGGGEDGGEGREEDRVFFSTALTFTGVPYGEYFHVQTRWVVTRVGVHG-DRCRLQIGVEVVFRQTVFLKAAIQAATIAETKKTLQDWLARAKARVQEMKGEAIRDAKLMRDG 645
A++S+ G + S P EG GG D + GG+ + E +S EE + F LPA E +++ ++CA ++L+ G +Y+ HY+CF S +G T+ ++ E++ +++A T G PNA+ ++ G +YFF+SF+ RD+ F I + ++ P G +L E + + R SL ++ +E +D R++ G S+L +N S SI + +P MA+ + + P + + T + + + + V +F F+ G+ F +S+ + GD E R W+ E+ SF H +++ G K +E Q +R+ + + T+ + VPY +YF V+ W V R D C L + + V F + K I +T+ E ++ W+ A +++ K E + KL+ DG
Sbjct: 2 AMLSTTSASVSGIQIDSSASAEVVSDPTPSSPEGSRSGGSPDRHDPSTSSPSPSRGGGGDNNQSEVMSRSEEYRQLFRLPAEEVIVQDFNCAC-QESILLQGHMYLFIHYICFYSNIFGYETKKIIPFSEITCVKRAKTAGIFPNAIEILA--GGKKYFFASFLSRDEAFKLIHDGWLEYGCPVK-PEGDLQDSLSESKSQVNDGVVKRALSSL--------DLENE-LDIPLRDENLHLSGS------------SSLPVISQNGVSPSSIQR-----SAEPVEDMASSSANTFNWKPEDINAPKLSSDFTKVAEAKFSIPVEEFFRLFFSDGAV--------------------SFVESFHKNCGDKEFRCTSWQPHEKLGHTRNVSFQHPIKMYF---------GAKFGGCQESQKFRM------------YRDSHLVIETSQEISDVPYADYFTVEGVWDVKRDCRDSIDGCILDVYLNVAFSKRTVWKGKIVQSTLEECREAYAHWIRMAHELLKQKKLENQKGNKLIEDG 465
BLAST of EWM28895.1 vs. NCBI_GenBank
Match: gi|720008907|ref|XP_010258771.1| (PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic-like [Nelumbo nucifera]) HSP 1 Score: 104.375 bits (259), Expect = 2.028e-19 Identity = 153/675 (22.67%), Postives = 262/675 (38.81%), Query Frame = 0
Query: 121 SVKALVSSAGTPRKGENFPAEEEELSTSHPPSRLKEGEDEGGGEDAGETVREGGEEGKEEDLSSVEEIKPFNLPAGERLLKSYSCALLPNNLLIHGRLYVTPHYLCFGS--WG-STRIVLAMREVSFIEKANTMGFVPNALWVVMRETGDRYFFSSFIYRDDCFDTIFSLLTKRLVGLEAPL--------GGTPAALL--EHGKKKKKKKMARMTPSLGKNVRWGPEVRH-----EGVDAGRREQEGAREGGEEATTKKVKPVLSTLATQEKNADSLLS----IPDGDGACAVKPPSAMAAVAVSRQPLP-----PLTLEDDAIIQRMTILTDEELACGVSKFLASFWGAGSERGREGGGEGGREGGREGGKGDFYQSYLEARGDNEVRVGGWEGREEQDAYSGE-SFVH-VRDVFYSRVRDGRGIGPKTVPTRECQMYRVEGEGGGEDGGEGREEDRVFFSTALTFTGVPYGEYFHVQTRWVVTRVGVHGDR-CRLQIGVEVVFRQTVFLKAAIQAATIAETKKTLQDWLARAKARVQEMKGEAIRDAKLMRDGKGGKEG-ESEGGKEDGGKEI----EGTLAERNATGAGEVESALLEDQRGEEETMRPFSRQHTPREEEEEGRKPSLEHGSCQSCFFCRLAPSLTFKGLPALLFLVLLVVLLLLFVALVLLI 760
S++++ SS + G + +E L P R ++ D+ R+ E L S E + F LP E L++ ++CA L N+L+ G +Y+ H++CF S +G T+ ++ EV+ + KA T PNA+ ++ G +YFF+SF+ RD+ + I + + A + G+ AL+ E+ K K++ + K+ R E + + R E G E+ ++PV NA++LLS I + A A K P VA S+ P+ L D+A+ FL SF R G K E R W EEQ Y+ + SF H ++ F +R +GI ++ ++YR + + T+ + VPYG+YF VQ W V G G+ C L + + V F + + I+ +T E + W+ A E ++ L R G E++ + D +I EG RN G ++ S ++ R ++ T + +L C + R + LP +L + +++LLL+ +++V+L+
Sbjct: 16 SIESIPSSPLVSKSGSDSGSETSSLGVVDPSDRNEQS-------DSSVNHRKDVEIQSAASLRSEEYRQLFRLPPDEVLVQDFNCA-LQENILLQGHMYLFVHHICFYSNIFGFETKKIITFHEVTCVRKAKTAAIFPNAIEILA--GGKKYFFASFLSRDEAYRLIVDGWAQHNDRVNAQIDCQESKSDNGSQDALVIFENSKSFKRQTNDLYSMDRNKDSRVLEECNRLSNGEDDISVSTRHSETLENGEED-----LEPV--------ANAETLLSRKPFIWKPEDANAPKIPECYTLVAESKFPIQLEEFFNLFFSDEAV-----------------NFLESF------------------HTRCGAK--------------EFRCTSW--YEEQFGYARDVSFQHPIKLYFGARYGHCQGI-------QKVRVYR---------------DRHMIVETSQEISDVPYGDYFRVQGLWDVKSTGDEGNSYCILHVYINVAFSKKTMWRGKIEQSTADECRDAYSIWINNAH--------ELLKQKHLTRQEDRAANGVETDAAQVDRHTKIEESSEGLHDARNHAGHPQLASDSMDSNRQFGNPLQGILNDTTSVSSLSKELLTTL-------CSYLR-----SRSHLPLILVITSVLILLLMQLSIVVLL 574
BLAST of EWM28895.1 vs. NCBI_GenBank
Match: gi|565498684|ref|XP_006306981.1| (hypothetical protein CARUB_v10008556mg [Capsella rubella] >gi|482575692|gb|EOA39879.1| hypothetical protein CARUB_v10008556mg [Capsella rubella]) HSP 1 Score: 103.99 bits (258), Expect = 2.134e-19 Identity = 117/489 (23.93%), Postives = 199/489 (40.70%), Query Frame = 0
Query: 174 GEEGKEEDLSSVEEIKP-FNLPAGERLLKSYSCALLPNNLLIHGRLYVTPHYLCFGS--WG-STRIVLAMREVSFIEKANTMGFVPNALWVVMRETGDRYFFSSFIYRDDCFDTIFSLLTKRLVGLEAPLGGTPAALLEHGKKKKKKKMARMT-PSLGKNVRWGPE----VRHEGVDAGRREQEGAREGGEEATTKKVKPVLSTLATQEKNADSLLSIPDGDGACAVKPPSAMAAVA---VSRQPL--PPLTLEDDAIIQRMTILTDEELACGVSKFLASFWGAGSERGREGGGEGGREGGREGGKGDFYQSYLEARGDNEVRVGGWEGREEQDAYSGESFVHVRDVFYSRVRDGRGIGPKTVPTRECQMYRVEGEGGGEDGGEGREEDRVFFSTALTFTGVPYGEYFHVQTRWVV---TRVGVHGDRCRLQIGVEVVFRQTVFLKAAIQAATIAETKKTLQDWLARAKARVQEMKGEAIRDAKLMRDG 645
G + + E +S EE + F LPA E L++ ++CA ++L+ G +Y+ HY+CF S +G T+ V+ E+S +++A T G PNA+ ++ G +YFF+SF+ RD+ F I LE+G K + +++T L + + P+ Q+ E + VK LS++ + L IP D + S++ ++ VS P+ P T+ED + + A K + F + E R +G F +S+ + GD E R W+ E+ SF H V++ G K +E Q +R+ + + T+ + VPY +YF V+ W V R + G C L + + V F + K I +T+ E ++ W+ A +++ K E KL+ DG
Sbjct: 62 GGDNQSEVISKSEEYRQLFRLPAEEVLVQDFNCAC-QESILLQGHMYLFIHYICFYSNIFGYETKKVIPFSEISCVKRAKTAGIFPNAIEILA--GGKKYFFASFLSRDEAFKLIHD------------------GWLEYGSAVKAEGDSQVTEQQLENTMLFTPQGFFTFSFCSSFLAYPFQDSLSESKNQVNDGVVKRALSSMDLANE-----LDIPLRDENLHLSGSSSLPVISQNGVSPSPVQRPAETVEDIMASSSANTVNWKPEAINAPKLSSDFTKVAEAKFSIPVEEFFRLFFSDGAVS-FVESFHKNCGDKEFRCTSWQPDEKLGHTRNVSFQHPIKVYF---------GAKFGGCQESQKFRM------------YRDSHLVIETSQEISDVPYADYFTVEGVWDVKRDCRDSIEG--CILDVFLNVAFSKRTVWKGKIVQSTLEECREAYAHWIRMAHELLKQKKLENQEGDKLIEDG 500
BLAST of EWM28895.1 vs. NCBI_GenBank
Match: gi|565498686|ref|XP_006306982.1| (hypothetical protein CARUB_v10008556mg [Capsella rubella] >gi|482575693|gb|EOA39880.1| hypothetical protein CARUB_v10008556mg [Capsella rubella]) HSP 1 Score: 103.99 bits (258), Expect = 2.703e-19 Identity = 117/489 (23.93%), Postives = 199/489 (40.70%), Query Frame = 0
Query: 174 GEEGKEEDLSSVEEIKP-FNLPAGERLLKSYSCALLPNNLLIHGRLYVTPHYLCFGS--WG-STRIVLAMREVSFIEKANTMGFVPNALWVVMRETGDRYFFSSFIYRDDCFDTIFSLLTKRLVGLEAPLGGTPAALLEHGKKKKKKKMARMT-PSLGKNVRWGPE----VRHEGVDAGRREQEGAREGGEEATTKKVKPVLSTLATQEKNADSLLSIPDGDGACAVKPPSAMAAVA---VSRQPL--PPLTLEDDAIIQRMTILTDEELACGVSKFLASFWGAGSERGREGGGEGGREGGREGGKGDFYQSYLEARGDNEVRVGGWEGREEQDAYSGESFVHVRDVFYSRVRDGRGIGPKTVPTRECQMYRVEGEGGGEDGGEGREEDRVFFSTALTFTGVPYGEYFHVQTRWVV---TRVGVHGDRCRLQIGVEVVFRQTVFLKAAIQAATIAETKKTLQDWLARAKARVQEMKGEAIRDAKLMRDG 645
G + + E +S EE + F LPA E L++ ++CA ++L+ G +Y+ HY+CF S +G T+ V+ E+S +++A T G PNA+ ++ G +YFF+SF+ RD+ F I LE+G K + +++T L + + P+ Q+ E + VK LS++ + L IP D + S++ ++ VS P+ P T+ED + + A K + F + E R +G F +S+ + GD E R W+ E+ SF H V++ G K +E Q +R+ + + T+ + VPY +YF V+ W V R + G C L + + V F + K I +T+ E ++ W+ A +++ K E KL+ DG
Sbjct: 62 GGDNQSEVISKSEEYRQLFRLPAEEVLVQDFNCAC-QESILLQGHMYLFIHYICFYSNIFGYETKKVIPFSEISCVKRAKTAGIFPNAIEILA--GGKKYFFASFLSRDEAFKLIHD------------------GWLEYGSAVKAEGDSQVTEQQLENTMLFTPQGFFTFSFCSSFLAYPFQDSLSESKNQVNDGVVKRALSSMDLANE-----LDIPLRDENLHLSGSSSLPVISQNGVSPSPVQRPAETVEDIMASSSANTVNWKPEAINAPKLSSDFTKVAEAKFSIPVEEFFRLFFSDGAVS-FVESFHKNCGDKEFRCTSWQPDEKLGHTRNVSFQHPIKVYF---------GAKFGGCQESQKFRM------------YRDSHLVIETSQEISDVPYADYFTVEGVWDVKRDCRDSIEG--CILDVFLNVAFSKRTVWKGKIVQSTLEECREAYAHWIRMAHELLKQKKLENQEGDKLIEDG 500 The following BLAST results are available for this feature:
BLAST of EWM28895.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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