EWM28903.1, cds1771 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28903.1 vs. NCBI_GenBank
Match: gi|585111345|gb|EWM28903.1| (x-pro dipeptidyl-peptidase domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 870.537 bits (2248), Expect = 0.000e+0 Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 0
Query: 1 MRSRFPDPRDVLQNAARILVYPLFLLNGLLLGLLCSPCVCVYCAWKRRPWNISSDAYVLDERNGEDDEPEHLVETGNASSLPDAPTKGLSTPSFSCLFPSFPEKPSTTINIKDVKYTTLYLSARDGTRLAVDVWLPPACKRAEGRKVGCVFHQARYYRSFKLWGPGNLARNGLPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNNNLPKIVFPFTDGVQPVSSAGPATLKAALREHRGNWSSTLDGLALEYADDKSEFNGRSPMDVSPYVFVDACLQRERERKRSKEEGGEEGRSVEGNGMPPFFLVSGWFDSTASCAIKLAHHLR 422
MRSRFPDPRDVLQNAARILVYPLFLLNGLLLGLLCSPCVCVYCAWKRRPWNISSDAYVLDERNGEDDEPEHLVETGNASSLPDAPTKGLSTPSFSCLFPSFPEKPSTTINIKDVKYTTLYLSARDGTRLAVDVWLPPACKRAEGRKVGCVFHQARYYRSFKLWGPGNLARNGLPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNNNLPKIVFPFTDGVQPVSSAGPATLKAALREHRGNWSSTLDGLALEYADDKSEFNGRSPMDVSPYVFVDACLQRERERKRSKEEGGEEGRSVEGNGMPPFFLVSGWFDSTASCAIKLAHHLR
Sbjct: 1 MRSRFPDPRDVLQNAARILVYPLFLLNGLLLGLLCSPCVCVYCAWKRRPWNISSDAYVLDERNGEDDEPEHLVETGNASSLPDAPTKGLSTPSFSCLFPSFPEKPSTTINIKDVKYTTLYLSARDGTRLAVDVWLPPACKRAEGRKVGCVFHQARYYRSFKLWGPGNLARNGLPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNNNLPKIVFPFTDGVQPVSSAGPATLKAALREHRGNWSSTLDGLALEYADDKSEFNGRSPMDVSPYVFVDACLQRERERKRSKEEGGEEGRSVEGNGMPPFFLVSGWFDSTASCAIKLAHHLR 422
BLAST of EWM28903.1 vs. NCBI_GenBank
Match: gi|585111344|gb|EWM28902.1| (x-pro dipeptidyl-peptidase domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 870.152 bits (2247), Expect = 0.000e+0 Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 0
Query: 1 MRSRFPDPRDVLQNAARILVYPLFLLNGLLLGLLCSPCVCVYCAWKRRPWNISSDAYVLDERNGEDDEPEHLVETGNASSLPDAPTKGLSTPSFSCLFPSFPEKPSTTINIKDVKYTTLYLSARDGTRLAVDVWLPPACKRAEGRKVGCVFHQARYYRSFKLWGPGNLARNGLPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNNNLPKIVFPFTDGVQPVSSAGPATLKAALREHRGNWSSTLDGLALEYADDKSEFNGRSPMDVSPYVFVDACLQRERERKRSKEEGGEEGRSVEGNGMPPFFLVSGWFDSTASCAIKLAHHLR 422
MRSRFPDPRDVLQNAARILVYPLFLLNGLLLGLLCSPCVCVYCAWKRRPWNISSDAYVLDERNGEDDEPEHLVETGNASSLPDAPTKGLSTPSFSCLFPSFPEKPSTTINIKDVKYTTLYLSARDGTRLAVDVWLPPACKRAEGRKVGCVFHQARYYRSFKLWGPGNLARNGLPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNNNLPKIVFPFTDGVQPVSSAGPATLKAALREHRGNWSSTLDGLALEYADDKSEFNGRSPMDVSPYVFVDACLQRERERKRSKEEGGEEGRSVEGNGMPPFFLVSGWFDSTASCAIKLAHHLR
Sbjct: 1 MRSRFPDPRDVLQNAARILVYPLFLLNGLLLGLLCSPCVCVYCAWKRRPWNISSDAYVLDERNGEDDEPEHLVETGNASSLPDAPTKGLSTPSFSCLFPSFPEKPSTTINIKDVKYTTLYLSARDGTRLAVDVWLPPACKRAEGRKVGCVFHQARYYRSFKLWGPGNLARNGLPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNNNLPKIVFPFTDGVQPVSSAGPATLKAALREHRGNWSSTLDGLALEYADDKSEFNGRSPMDVSPYVFVDACLQRERERKRSKEEGGEEGRSVEGNGMPPFFLVSGWFDSTASCAIKLAHHLR 422
BLAST of EWM28903.1 vs. NCBI_GenBank
Match: gi|1173931457|gb|OQR83855.1| (hypothetical protein ACHHYP_14187 [Achlya hypogyna]) HSP 1 Score: 209.149 bits (531), Expect = 2.043e-57 Identity = 131/326 (40.18%), Postives = 177/326 (54.29%), Query Frame = 0
Query: 98 FPSFPEKPSTTINIKDVKYTTLYLSARDGTRLAVDVWLPPACKRAEGRKVGCVFHQARYYRSFKLWGPGNLARNG-LPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNNNLPKIVFP------FTDGVQPVSSAGPATLKAALREHRGNWSSTLDGLALEYADDKSEFNGRSPMDVSPYVFVDACLQRERERKRSKEEGGEEGRSVEGNGMPPFFLVSGWFDSTASCAIK 416
F + P P T+ ++ YL+ DGTRLA+DV+LP A E K C+F+Q+RY+RS L P L NG +PI +N+ +FER L++G A+VS+DIRG GASFG + PW E D++ VMDWI+ Q WSNG++GLWGISYEGT A LS H VKA VPMYMF DVY D+ GG+ F W+ ++D+N+ K+ F GV P +SA L A+R+H NW +T D L D S+ +P D+S + + A Q+ R P SGWFD+TA A++
Sbjct: 49 FTAIP--PPTSKAKTAYSVSSQYLTMADGTRLAMDVYLPTAG--GEQAKRPCIFNQSRYHRSVSLRWPFRLLVNGGMPIGFINSVFFERMLAEGYAIVSVDIRGCGASFGTNVHPWNLQERLDSVEVMDWIVRQSWSNGQIGLWGISYEGTAAYLSASMQHPAVKACVPMYMFYDVYHDIACPGGITQHYFPTLWQGFNSVVDSNDYSKLELMLGMGKWFLQGVTP-ASASYQDLLDAVRDHGKNWIATDDITPLLNRDSPSKTTSSTPGDLSLHHVLRA-FQQARV---------------------PTLFYSGWFDATARSALQ 347
BLAST of EWM28903.1 vs. NCBI_GenBank
Match: gi|298706994|emb|CBJ29802.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 196.823 bits (499), Expect = 1.330e-51 Identity = 109/253 (43.08%), Postives = 150/253 (59.29%), Query Frame = 0
Query: 112 KDVKYTTLYLSARDGTRLAVDVWLPPACKRAEGRK-VGCVFHQARYYRSFKLWGPGNLARNG-LPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNNNLPK---IVFPFTDGVQPVSSAGPATLKA--ALREHRGNWSSTLDGLALEYADDKSEFNGR 357
KD++ T Y++ RDG +LA DVW+P K E RK + VFHQARYYRS L P NL NG PI+ +N+ +F+ FLS + +VS+D+RG+GASFG GPW E D++ V+DWI Q WSNGR+ LWG+SYEGT A + + H V PM+ F DVY D+ GG+ +R F +W+ LD+ + + F +GV PV S +A A+ +H+ NW S L+ + Y DD+S GR
Sbjct: 124 KDIELRTCYITTRDGVKLATDVWIP--LKALEKRKTLPVVFHQARYYRSATLRWPFNLFVNGGKPISFINDPFFKSFLSHDMVLVSVDVRGTGASFGTHPGPWSPEEQQDSLEVLDWIDQQSWSNGRVALWGVSYEGTSAFFTSLLRHPSVVCCCPMFFFWDVYDDISHPGGVPMRHFSVSWQGFNDSLDSGWVQSTGWMARIFLEGVTPVKSEDSWGYQAHQAISQHKDNW-SLLEDDHIRYMDDRSRQTGR 373
BLAST of EWM28903.1 vs. NCBI_GenBank
Match: gi|698783681|ref|XP_009824884.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574120933|gb|ETV86411.1| hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 182.57 bits (462), Expect = 1.839e-48 Identity = 101/231 (43.72%), Postives = 133/231 (57.58%), Query Frame = 0
Query: 117 TTLYLSARDGTRLAVDVWLPPACKRAEGRKVGCVFHQARYYRSFKL-WGPGNLARNGLPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNN---NLPKIV---FPFTDGVQPVSSAGPATLKAALREHRGNWSSTL 340
T+ Y++ DGTR+A+D++LP A R C+ Q RY+RS L W LA G P + L+ Y+E L G AVV+MDIRG+GASFG PW +E D++ V+DWI QPWSNGR+GLWG+SYE T A L+ H +KA VPMYMF D+YSD+ GG+ F W +T LD N +LP ++ F GV P S L A+ EH NW + +
Sbjct: 75 TSQYITTTDGTRIAIDLYLPTDSICASPR--ACILTQTRYFRSISLRWPWRLLANQGRPFSFLHTRYYEGMLGAGYAVVAMDIRGTGASFGTVLHPWHVLERQDSVDVIDWITRQPWSNGRVGLWGMSYEATAAYLTVSTHHPAIKACVPMYMFYDMYSDIASPGGIAQHFFTLKWAELTAYLDRNAMSDLPAMMGLGRLFFQGVTPASRDWD-DLVCAVAEHETNWKAEI 302
BLAST of EWM28903.1 vs. NCBI_GenBank
Match: gi|698783679|ref|XP_009824883.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574120934|gb|ETV86412.1| hypothetical protein, variant 2 [Aphanomyces astaci]) HSP 1 Score: 182.185 bits (461), Expect = 2.394e-48 Identity = 101/231 (43.72%), Postives = 133/231 (57.58%), Query Frame = 0
Query: 117 TTLYLSARDGTRLAVDVWLPPACKRAEGRKVGCVFHQARYYRSFKL-WGPGNLARNGLPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNN---NLPKIV---FPFTDGVQPVSSAGPATLKAALREHRGNWSSTL 340
T+ Y++ DGTR+A+D++LP A R C+ Q RY+RS L W LA G P + L+ Y+E L G AVV+MDIRG+GASFG PW +E D++ V+DWI QPWSNGR+GLWG+SYE T A L+ H +KA VPMYMF D+YSD+ GG+ F W +T LD N +LP ++ F GV P S L A+ EH NW + +
Sbjct: 79 TSQYITTTDGTRIAIDLYLPTDSICASPR--ACILTQTRYFRSISLRWPWRLLANQGRPFSFLHTRYYEGMLGAGYAVVAMDIRGTGASFGTVLHPWHVLERQDSVDVIDWITRQPWSNGRVGLWGMSYEATAAYLTVSTHHPAIKACVPMYMFYDMYSDIASPGGIAQHFFTLKWAELTAYLDRNAMSDLPAMMGLGRLFFQGVTPASRDWD-DLVCAVAEHETNWKAEI 306
BLAST of EWM28903.1 vs. NCBI_GenBank
Match: gi|698783677|ref|XP_009824882.1| (hypothetical protein H257_02783 [Aphanomyces astaci] >gi|574120932|gb|ETV86410.1| hypothetical protein H257_02783 [Aphanomyces astaci]) HSP 1 Score: 183.341 bits (464), Expect = 8.305e-48 Identity = 101/231 (43.72%), Postives = 133/231 (57.58%), Query Frame = 0
Query: 117 TTLYLSARDGTRLAVDVWLPPACKRAEGRKVGCVFHQARYYRSFKL-WGPGNLARNGLPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNN---NLPKIV---FPFTDGVQPVSSAGPATLKAALREHRGNWSSTL 340
T+ Y++ DGTR+A+D++LP A R C+ Q RY+RS L W LA G P + L+ Y+E L G AVV+MDIRG+GASFG PW +E D++ V+DWI QPWSNGR+GLWG+SYE T A L+ H +KA VPMYMF D+YSD+ GG+ F W +T LD N +LP ++ F GV P S L A+ EH NW + +
Sbjct: 75 TSQYITTTDGTRIAIDLYLPTDSICASPR--ACILTQTRYFRSISLRWPWRLLANQGRPFSFLHTRYYEGMLGAGYAVVAMDIRGTGASFGTVLHPWHVLERQDSVDVIDWITRQPWSNGRVGLWGMSYEATAAYLTVSTHHPAIKACVPMYMFYDMYSDIASPGGIAQHFFTLKWAELTAYLDRNAMSDLPAMMGLGRLFFQGVTPASRDW-DDLVCAVAEHETNWKAEI 302
BLAST of EWM28903.1 vs. NCBI_GenBank
Match: gi|673046315|ref|XP_008877118.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574467333|gb|ETV94357.1| hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 180.259 bits (456), Expect = 5.681e-47 Identity = 118/345 (34.20%), Postives = 175/345 (50.72%), Query Frame = 0
Query: 88 GLSTPSFSCLFPSFPEKPSTTINIKDVKYTTLYLSARDGTRLAVDVWLP--------PACKRAEGRKVGCVFHQARYYRSFKLWGPGNLARN-GLPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNNNLPKIVFPFTDGVQPVSSAG--PAT-----LKAALREHRGNWSSTLDGLALEYADDKSEFNGRSPMDVSPYVFVDACLQRERERKRSKEEGGEEGRSVEGNGMPPFFLVSGWFDSTASCAIK 416
G+S P+ S P PS Y++ARD TR+A+D++LP P+ + A V C+ Q RY+RS L P L N G P++ L+ Y+E L G AVV++D+RG+GASFG PW E D++ V+DWI QPWSNGR+GLWG+SYE T A L+ H ++A VPMYMF D+Y+D+ GG+ F Q W + LD N+ + P +GV + G PA+ L +A+ +H+ NW + ++ + D + +G DV+ + C R +V+ G+P F +GWFD T +++
Sbjct: 29 GISEPANSSTSPPTYTMPSQ------------YITARDDTRIAIDLYLPAGTSNLTSPSTEHAA--PVACILTQTRYFRSISLRWPWRLFINKGRPMSFLHTRYYESMLQAGYAVVALDLRGTGASFGTHLHPWHPSERQDSVDVIDWITRQPWSNGRVGLWGMSYEATAAYLTVSKHHPAIRACVPMYMFYDMYNDIASPGGIAQHFFTQKWAELIEFLDRNDFGAL--PSMNGVGGLFFQGVAPASRDWHDLTSAVADHKPNWKAEINPI----LDRDTPTSG----DVTAGA-LSLCHVRH---------------AVKTAGVPILFY-TGWFDQTVRSSLQ 332
BLAST of EWM28903.1 vs. NCBI_GenBank
Match: gi|673046319|ref|XP_008877120.1| (hypothetical protein H310_11998 [Aphanomyces invadans] >gi|574467332|gb|ETV94356.1| hypothetical protein H310_11998 [Aphanomyces invadans]) HSP 1 Score: 180.259 bits (456), Expect = 1.043e-46 Identity = 118/345 (34.20%), Postives = 175/345 (50.72%), Query Frame = 0
Query: 88 GLSTPSFSCLFPSFPEKPSTTINIKDVKYTTLYLSARDGTRLAVDVWLP--------PACKRAEGRKVGCVFHQARYYRSFKLWGPGNLARN-GLPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNNNLPKIVFPFTDGVQPVSSAG--PAT-----LKAALREHRGNWSSTLDGLALEYADDKSEFNGRSPMDVSPYVFVDACLQRERERKRSKEEGGEEGRSVEGNGMPPFFLVSGWFDSTASCAIK 416
G+S P+ S P PS Y++ARD TR+A+D++LP P+ + A V C+ Q RY+RS L P L N G P++ L+ Y+E L G AVV++D+RG+GASFG PW E D++ V+DWI QPWSNGR+GLWG+SYE T A L+ H ++A VPMYMF D+Y+D+ GG+ F Q W + LD N+ + P +GV + G PA+ L +A+ +H+ NW + ++ + D + +G DV+ + C R +V+ G+P F +GWFD T +++
Sbjct: 66 GISEPANSSTSPPTYTMPSQ------------YITARDDTRIAIDLYLPAGTSNLTSPSTEHAA--PVACILTQTRYFRSISLRWPWRLFINKGRPMSFLHTRYYESMLQAGYAVVALDLRGTGASFGTHLHPWHPSERQDSVDVIDWITRQPWSNGRVGLWGMSYEATAAYLTVSKHHPAIRACVPMYMFYDMYNDIASPGGIAQHFFTQKWAELIEFLDRNDFGAL--PSMNGVGGLFFQGVAPASRDWHDLTSAVADHKPNWKAEINPI----LDRDTPTSG----DVTAGA-LSLCHVRH---------------AVKTAGVPILFY-TGWFDQTVRSSLQ 369
BLAST of EWM28903.1 vs. NCBI_GenBank
Match: gi|813154576|ref|XP_012201337.1| (hypothetical protein SPRG_07152 [Saprolegnia parasitica CBS 223.65] >gi|641533914|gb|KDO27880.1| hypothetical protein SPRG_07152 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 178.718 bits (452), Expect = 1.394e-46 Identity = 110/299 (36.79%), Postives = 158/299 (52.84%), Query Frame = 0
Query: 125 DGTRLAVDVWLPPACKRAEGRKVGCVFHQARYYRSFKLWGPGNLARNG-LPINLLNNEYFERFLSQGLAVVSMDIRGSGASFGCSRGPWLEVETDDAMVVMDWILHQPWSNGRLGLWGISYEGTRALLSGVAGHRGVKAVVPMYMFLDVYSDVGFIGGMHLRGFVQNWERITRLLDNNNLPKIVFP------FTDGVQPVSSAGPATLKAALREHRGNWSSTLDGLALEYADDKSEFNGRSPMDVSPYVFVDACLQRERERKRSKEEGGEEGRSVEGNGMPPFFLVSGWFDSTASCAIK 416
DG R+A+DV+LP +A VF+Q+RY RS L P L NG P+ +N+ +F R L+ G AVVSMDIRG GAS+G + PW E D++ V+DWI+ QP+SNG++ LWGISYEGT A L+ H VKA VPMYMF DVY D+ GG+ F W+ ++D+N+ K+ F GV P S++ A L AA+ +H+ NW +T D++P + ++ + + + + +P F SGWFD+TA A++
Sbjct: 3 DGMRIALDVYLPLGPMQARP----VVFNQSRYQRSVSLRWPFRLFVNGGKPVGFINSGFFARMLADGYAVVSMDIRGCGASYGVNTRPWNVQERLDSVEVLDWIVQQPFSNGQIALWGISYEGTAAYLTASMKHPAVKACVPMYMFYDVYHDIACPGGITQHYFPTLWQAFNSVVDSNDYGKLDLMLRMGSWFIQGVTPASTSY-ADLVAAVADHKNNWIAT--------------------DDITPTLLRNSPSVTTPDTTAGDLSLHQVYHAFQEANVPTLFY-SGWFDATARSALQ 275 The following BLAST results are available for this feature:
BLAST of EWM28903.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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