EWM30529.1, cds176 (CDS) Nannochloropsis gaditana

Overview
NameEWM30529.1
Unique Namecds176
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:459323..459341 +
Alignment locationCM002455.1:460256..460389 +
Alignment locationCM002455.1:460480..460548 +
Alignment locationCM002455.1:460796..462553 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30529.1
Productcentromere v-like protein
Orig transcript idgnl|cribi|Naga_100013g42.9817.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:459323..459341 +
CM002455.1supercontigCM002455.1:460256..460389 +
CM002455.1supercontigCM002455.1:460480..460548 +
CM002455.1supercontigCM002455.1:460796..462553 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016846carbon-sulfur lyase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR011057Mss4-like
IPR006913GFA/CENP-V
Homology
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|585113193|gb|EWM30529.1| (centromere v-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1341.25 bits (3470), Expect = 0.000e+0
Identity = 659/659 (100.00%), Postives = 659/659 (100.00%), Query Frame = 0
Query:    1 MKKFPISGFRLGLLLFFPRRSCAMFVKQATTDRLLGMLVTLATGAAIFYIQHGIKAFVNRRKSGAKSERPRPKEATNYGDPYFRARWGHMTGKGGIFELIHHSGACMCGRFGFRLLAPADLKALDCPGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYEDLLGFPRGSREAAGATAAGDDPCRARAWERGKAAGPEDVSEGSRPKSHGGSSKVAAEGALVKKGWGQGVGVGSGTTWGGRVSGLVENALPFRNVFGGSGSSLGGKVRDGRGYHSSASVQTTGATSLLSHLLSRASLSMRPAPGGLLSIEAGGSAAEEEGLAESGSPAGSQETSPVMPTEGSADNMWLAWDESCEIRRDRGETDGVGRRGWGQPPPRRVTSSTRMLMSGVSELTVPLPGQSDAASQRVIGPAPGWERLGDGCTPPSMHQLRYHLKRHLKRRLNWLSSNGGGETGLGRGDLEEREDFGETRAYPGDQHFFQHHEHEPAPFIEEEETIHSAYGLKSRQVEGLPSKHQRRMTTPTPPPSPSVRSSFASTPATPLADATHKHSANTSISSSPHSQQIFPSPQSEEARTKKGGLCETPPNGIRKKSKQARGGRENRATVPKGTKAD 659
            MKKFPISGFRLGLLLFFPRRSCAMFVKQATTDRLLGMLVTLATGAAIFYIQHGIKAFVNRRKSGAKSERPRPKEATNYGDPYFRARWGHMTGKGGIFELIHHSGACMCGRFGFRLLAPADLKALDCPGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYEDLLGFPRGSREAAGATAAGDDPCRARAWERGKAAGPEDVSEGSRPKSHGGSSKVAAEGALVKKGWGQGVGVGSGTTWGGRVSGLVENALPFRNVFGGSGSSLGGKVRDGRGYHSSASVQTTGATSLLSHLLSRASLSMRPAPGGLLSIEAGGSAAEEEGLAESGSPAGSQETSPVMPTEGSADNMWLAWDESCEIRRDRGETDGVGRRGWGQPPPRRVTSSTRMLMSGVSELTVPLPGQSDAASQRVIGPAPGWERLGDGCTPPSMHQLRYHLKRHLKRRLNWLSSNGGGETGLGRGDLEEREDFGETRAYPGDQHFFQHHEHEPAPFIEEEETIHSAYGLKSRQVEGLPSKHQRRMTTPTPPPSPSVRSSFASTPATPLADATHKHSANTSISSSPHSQQIFPSPQSEEARTKKGGLCETPPNGIRKKSKQARGGRENRATVPKGTKAD
Sbjct:    1 MKKFPISGFRLGLLLFFPRRSCAMFVKQATTDRLLGMLVTLATGAAIFYIQHGIKAFVNRRKSGAKSERPRPKEATNYGDPYFRARWGHMTGKGGIFELIHHSGACMCGRFGFRLLAPADLKALDCPGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYEDLLGFPRGSREAAGATAAGDDPCRARAWERGKAAGPEDVSEGSRPKSHGGSSKVAAEGALVKKGWGQGVGVGSGTTWGGRVSGLVENALPFRNVFGGSGSSLGGKVRDGRGYHSSASVQTTGATSLLSHLLSRASLSMRPAPGGLLSIEAGGSAAEEEGLAESGSPAGSQETSPVMPTEGSADNMWLAWDESCEIRRDRGETDGVGRRGWGQPPPRRVTSSTRMLMSGVSELTVPLPGQSDAASQRVIGPAPGWERLGDGCTPPSMHQLRYHLKRHLKRRLNWLSSNGGGETGLGRGDLEEREDFGETRAYPGDQHFFQHHEHEPAPFIEEEETIHSAYGLKSRQVEGLPSKHQRRMTTPTPPPSPSVRSSFASTPATPLADATHKHSANTSISSSPHSQQIFPSPQSEEARTKKGGLCETPPNGIRKKSKQARGGRENRATVPKGTKAD 659          
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|553195773|ref|XP_005856205.1| (centromere v-like protein [Nannochloropsis gaditana CCMP526] >gi|422292853|gb|EKU20155.1| centromere v-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1144.03 bits (2958), Expect = 0.000e+0
Identity = 564/570 (98.95%), Postives = 567/570 (99.47%), Query Frame = 0
Query:   90 MTGKGGIFELIHHSGACMCGRFGFRLLAPADLKALDCPGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYEDLLGFPRGSREAAGATAAGDDPCRARAWERGKAAGPEDVSEGSRPKSHGGSSKVAAEGALVKKGWGQGVGVGSGTTWGGRVSGLVENALPFRNVFGGSGSSLGGKVRDGRGYHSSASVQTTGATSLLSHLLSRASLSMRPAPGGLLSIEAGGSAAEEEGLAESGSPAGSQETSPVMPTEGSADNMWLAWDESCEIRRDRGETDGVGRRGWGQPPPRRVTSSTRMLMSGVSELTVPLPGQSDAASQRVIGPAPGWERLGDGCTPPSMHQLRYHLKRHLKRRLNWLSSNGGGETGLGRGDLEEREDFGETRAYPGDQHFFQHHEHEPAPFIEEEETIHSAYGLKSRQVEGLPSKHQRRMTTPTPPPSPSVRSSFASTPATPLADATHKHSANTSISSSPHSQQIFPSPQSEEARTKKGGLCETPPNGIRKKSKQARGGRENRATVPKGTKAD 659
            MTGKGGIFELIHHSGACMCGRFGFRLLAPADLKALDCPGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGH+VVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYEDLLGFPRGSREAAGATAAGDDPCRARAWERGKAAGPEDVSEGSRPKSHGGSSKVAAEGALVKKGWGQGVGVGSGTTWGGRVSGLVENALPFRNVFGGSGSSLGGKVRDG GYHSSASVQTTGATSLLSHLLSRASLSMRPAPGGLLSIEAGGSAAEEEGLAESGSPAGSQETSPVMPTEGSADNMWLAWDESCEIRRDRGETDGVGRRGWGQPPPRRVTSSTRMLMSGVSELTVPLPGQSDAASQRVIGPAPGWER+ DGCTPPSMHQLRYHLKRHLKRRLNWLSSNGGGETGLGRGDLEEREDFGETRAYPGDQHFFQHHEHEPAPFIEEEETIHSAYGLKSRQVEGLPSKHQRRMTTPTPPPSPSVRSSFASTPATPLADATHKHSANTSISSSPHSQQ+FPSPQSEEARTKKGGLC TPPNGIRKKSKQARGGRENRATVPKGTKAD
Sbjct:    1 MTGKGGIFELIHHSGACMCGRFGFRLLAPADLKALDCPGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHVVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYEDLLGFPRGSREAAGATAAGDDPCRARAWERGKAAGPEDVSEGSRPKSHGGSSKVAAEGALVKKGWGQGVGVGSGTTWGGRVSGLVENALPFRNVFGGSGSSLGGKVRDGCGYHSSASVQTTGATSLLSHLLSRASLSMRPAPGGLLSIEAGGSAAEEEGLAESGSPAGSQETSPVMPTEGSADNMWLAWDESCEIRRDRGETDGVGRRGWGQPPPRRVTSSTRMLMSGVSELTVPLPGQSDAASQRVIGPAPGWERVSDGCTPPSMHQLRYHLKRHLKRRLNWLSSNGGGETGLGRGDLEEREDFGETRAYPGDQHFFQHHEHEPAPFIEEEETIHSAYGLKSRQVEGLPSKHQRRMTTPTPPPSPSVRSSFASTPATPLADATHKHSANTSISSSPHSQQVFPSPQSEEARTKKGGLCGTPPNGIRKKSKQARGGRENRATVPKGTKAD 570          
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|1200709297|gb|OUY03085.1| (aldehyde-activating protein [Alteromonadaceae bacterium TMED7])

HSP 1 Score: 73.9442 bits (180), Expect = 3.457e-12
Identity = 41/111 (36.94%), Postives = 54/111 (48.65%), Query Frame = 0
Query:   99 LIHHSGACMCGRFGFRLLAPADLKALDCPGPV----RYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEV 205
            ++ H+G+C CG   F + AP DLK  +C   +     Y H+ VPA  F  LQ  + LT YT       H   H FC  CG+  F       D   VNV CL  AS+ S+E+
Sbjct:    1 MVEHAGSCHCGAIKFAVSAPTDLKVNECNCSICSKSGYLHLIVPADHFVLLQGEQCLTTYT----FNTHTARHLFCKICGIKPFYIPRSHPDGYSVNVRCLDEASVNSIEI 107          
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|1125328683|gb|OLC69914.1| (aldehyde-activating protein [Deltaproteobacteria bacterium 13_1_40CM_4_54_4])

HSP 1 Score: 71.633 bits (174), Expect = 2.973e-11
Identity = 38/115 (33.04%), Postives = 55/115 (47.83%), Query Frame = 0
Query:   99 LIHHSGACMCGRFGFRLLAPADLKALDCPGPV----RYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYE 209
            L+ H G C CGR  F + APAD++A++C   +     + H+ VP S F  +Q   +LT YT        +  H FC  CGV  F       D   +NV C   A I S+ +  ++
Sbjct:    5 LVKHVGGCHCGRVKFEVQAPADIEAIECNCSICSKSGFLHLIVPKSRFVLIQGDEVLTTYT----FNTGVAKHRFCKVCGVKSFYIPRSNPDGYSINVRCFESAGISSIRIKPFD 115          
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|1082687001|gb|OGA09730.1| (aldehyde-activating protein [Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14])

HSP 1 Score: 68.1662 bits (165), Expect = 4.302e-10
Identity = 44/129 (34.11%), Postives = 59/129 (45.74%), Query Frame = 0
Query:   99 LIHHSGACMCGRFGFRLLAPADLKALDC----PGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYY---EDLLGFPRGSRE 220
            +I H+G C CGR  F +LAPA L+  DC     G   Y H+ VPA  F+ L     L  YT       H   H FC+ CGV  F       D   VN  CL   ++ S+ +  +   E  + +P+G  E
Sbjct:    1 MIKHTGGCHCGRVRFEVLAPARLEVSDCNCSICGKAGYLHLVVPADRFKLLSGSDALQTYT----FNTHTAKHLFCSVCGVKSFYVPRSHPDGYSVNARCLDPGTVESLSIRQFNGREWEMQYPKGRGE 125          
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|1034190194|ref|XP_016798309.1| (PREDICTED: centromere protein V-like [Pan troglodytes])

HSP 1 Score: 71.2478 bits (173), Expect = 6.593e-10
Identity = 46/136 (33.82%), Postives = 66/136 (48.53%), Query Frame = 0
Query:   83 FRARWGHMTGKGG------IFE---LIHHSGACMCGRFGFRLLAPADLKALDCPGPV----RYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEV 205
            FR  WG ++ +G        FE   L+HH+G C CG   F + APADL+ +DC   +    ++ H  VPAS F  LQ    +  Y +      H  +H+FC+ CGV  F A+        V   CL   ++RSV +
Sbjct:  121 FRKLWG-LSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIVTYRS----NTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVI 251          
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|517801626|ref|WP_018971834.1| (hypothetical protein [Rudaea cellulosilytica])

HSP 1 Score: 67.3958 bits (163), Expect = 7.560e-10
Identity = 42/111 (37.84%), Postives = 53/111 (47.75%), Query Frame = 0
Query:   99 LIHHSGACMCGRFGFRLLAPADLKALDCPGPV----RYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEV 205
            L+ H G C CG   F + APA + ALDC   +     Y H+ VPA+ F+ L     LT YT           H FC  CG+  F       D + VNV CL  A+I SV+V
Sbjct:    4 LVTHRGGCHCGAVRFEVDAPARIAALDCNCSICRMSGYIHLIVPATRFRLLAGAGALTEYT----FNTGTAKHRFCRICGIKSFYIPRSHPDGVDVNVHCLDAATIESVDV 110          
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|686766151|ref|XP_009233133.1| (PREDICTED: centromere protein V-like [Pongo abelii])

HSP 1 Score: 70.4774 bits (171), Expect = 1.225e-9
Identity = 46/136 (33.82%), Postives = 66/136 (48.53%), Query Frame = 0
Query:   83 FRARWGHMTGKGG------IFE---LIHHSGACMCGRFGFRLLAPADLKALDCPGPV----RYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEV 205
            FR  WG ++ +G        FE   L+HH+G C CG   F + APADL+ +DC   +    ++ H  VPAS F  LQ    +  Y +      H  +H+FC+ CGV  F A+        V   CL   ++RSV +
Sbjct:  121 FRKLWG-LSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFVVPASRFTLLQGAESIVTYRS----NTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVI 251          
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|1064146114|gb|ODU44862.1| (aldehyde-activating protein [Xanthomonadaceae bacterium SCN 69-123])

HSP 1 Score: 67.0106 bits (162), Expect = 1.304e-9
Identity = 42/115 (36.52%), Postives = 57/115 (49.57%), Query Frame = 0
Query:   99 LIHHSGACMCGRFGFRLLAPADLKALDCPGPVR----YPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYE 209
            LI H+G C CG   F + APAD++A+DC   +     + H+ VPAS F+ L D   +T Y+     G     H FC  CG+  +       D   VNV CL  A+I SV  T + 
Sbjct:    5 LITHTGGCHCGAVRFEVDAPADIEAVDCNCSLCAMTGFLHLIVPASRFRLLSDPAAMTEYS----FGTGTARHFFCAICGIKSWYVPRSNPDGFDVNVRCLDPATIASVRATPFN 115          
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|1044450601|ref|XP_017376520.1| (PREDICTED: centromere protein V-like [Cebus capucinus imitator] >gi|1044450603|ref|XP_017376521.1| PREDICTED: centromere protein V-like [Cebus capucinus imitator])

HSP 1 Score: 70.0922 bits (170), Expect = 1.304e-9
Identity = 46/136 (33.82%), Postives = 66/136 (48.53%), Query Frame = 0
Query:   83 FRARWGHMTGKGG------IFE---LIHHSGACMCGRFGFRLLAPADLKALDCPGPV----RYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEV 205
            FR  WG ++ +G        FE   L+HH+G C CG   F + APADL+ +DC   +    ++ H  VPAS F  LQ    +  Y +      H  +H+FC+ CGV  F A+        V   CL   ++RSV +
Sbjct:  106 FRKLWG-LSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGADSIVTYRS----NTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVI 236          
The following BLAST results are available for this feature:
BLAST of EWM30529.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113193|gb|EWM30529.1|0.000e+0100.00centromere v-like protein [Nannochloropsis gaditan... [more]
gi|553195773|ref|XP_005856205.1|0.000e+098.95centromere v-like protein [Nannochloropsis gaditan... [more]
gi|1200709297|gb|OUY03085.1|3.457e-1236.94aldehyde-activating protein [Alteromonadaceae bact... [more]
gi|1125328683|gb|OLC69914.1|2.973e-1133.04aldehyde-activating protein [Deltaproteobacteria b... [more]
gi|1082687001|gb|OGA09730.1|4.302e-1034.11aldehyde-activating protein [Betaproteobacteria ba... [more]
gi|1034190194|ref|XP_016798309.1|6.593e-1033.82PREDICTED: centromere protein V-like [Pan troglody... [more]
gi|517801626|ref|WP_018971834.1|7.560e-1037.84hypothetical protein [Rudaea cellulosilytica][more]
gi|686766151|ref|XP_009233133.1|1.225e-933.82PREDICTED: centromere protein V-like [Pongo abelii... [more]
gi|1064146114|gb|ODU44862.1|1.304e-936.52aldehyde-activating protein [Xanthomonadaceae bact... [more]
gi|1044450601|ref|XP_017376520.1|1.304e-933.82PREDICTED: centromere protein V-like [Cebus capuci... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna176rna176Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications