EWM30529.1, cds176 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|585113193|gb|EWM30529.1| (centromere v-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1341.25 bits (3470), Expect = 0.000e+0 Identity = 659/659 (100.00%), Postives = 659/659 (100.00%), Query Frame = 0
Query: 1 MKKFPISGFRLGLLLFFPRRSCAMFVKQATTDRLLGMLVTLATGAAIFYIQHGIKAFVNRRKSGAKSERPRPKEATNYGDPYFRARWGHMTGKGGIFELIHHSGACMCGRFGFRLLAPADLKALDCPGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYEDLLGFPRGSREAAGATAAGDDPCRARAWERGKAAGPEDVSEGSRPKSHGGSSKVAAEGALVKKGWGQGVGVGSGTTWGGRVSGLVENALPFRNVFGGSGSSLGGKVRDGRGYHSSASVQTTGATSLLSHLLSRASLSMRPAPGGLLSIEAGGSAAEEEGLAESGSPAGSQETSPVMPTEGSADNMWLAWDESCEIRRDRGETDGVGRRGWGQPPPRRVTSSTRMLMSGVSELTVPLPGQSDAASQRVIGPAPGWERLGDGCTPPSMHQLRYHLKRHLKRRLNWLSSNGGGETGLGRGDLEEREDFGETRAYPGDQHFFQHHEHEPAPFIEEEETIHSAYGLKSRQVEGLPSKHQRRMTTPTPPPSPSVRSSFASTPATPLADATHKHSANTSISSSPHSQQIFPSPQSEEARTKKGGLCETPPNGIRKKSKQARGGRENRATVPKGTKAD 659
MKKFPISGFRLGLLLFFPRRSCAMFVKQATTDRLLGMLVTLATGAAIFYIQHGIKAFVNRRKSGAKSERPRPKEATNYGDPYFRARWGHMTGKGGIFELIHHSGACMCGRFGFRLLAPADLKALDCPGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYEDLLGFPRGSREAAGATAAGDDPCRARAWERGKAAGPEDVSEGSRPKSHGGSSKVAAEGALVKKGWGQGVGVGSGTTWGGRVSGLVENALPFRNVFGGSGSSLGGKVRDGRGYHSSASVQTTGATSLLSHLLSRASLSMRPAPGGLLSIEAGGSAAEEEGLAESGSPAGSQETSPVMPTEGSADNMWLAWDESCEIRRDRGETDGVGRRGWGQPPPRRVTSSTRMLMSGVSELTVPLPGQSDAASQRVIGPAPGWERLGDGCTPPSMHQLRYHLKRHLKRRLNWLSSNGGGETGLGRGDLEEREDFGETRAYPGDQHFFQHHEHEPAPFIEEEETIHSAYGLKSRQVEGLPSKHQRRMTTPTPPPSPSVRSSFASTPATPLADATHKHSANTSISSSPHSQQIFPSPQSEEARTKKGGLCETPPNGIRKKSKQARGGRENRATVPKGTKAD
Sbjct: 1 MKKFPISGFRLGLLLFFPRRSCAMFVKQATTDRLLGMLVTLATGAAIFYIQHGIKAFVNRRKSGAKSERPRPKEATNYGDPYFRARWGHMTGKGGIFELIHHSGACMCGRFGFRLLAPADLKALDCPGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYEDLLGFPRGSREAAGATAAGDDPCRARAWERGKAAGPEDVSEGSRPKSHGGSSKVAAEGALVKKGWGQGVGVGSGTTWGGRVSGLVENALPFRNVFGGSGSSLGGKVRDGRGYHSSASVQTTGATSLLSHLLSRASLSMRPAPGGLLSIEAGGSAAEEEGLAESGSPAGSQETSPVMPTEGSADNMWLAWDESCEIRRDRGETDGVGRRGWGQPPPRRVTSSTRMLMSGVSELTVPLPGQSDAASQRVIGPAPGWERLGDGCTPPSMHQLRYHLKRHLKRRLNWLSSNGGGETGLGRGDLEEREDFGETRAYPGDQHFFQHHEHEPAPFIEEEETIHSAYGLKSRQVEGLPSKHQRRMTTPTPPPSPSVRSSFASTPATPLADATHKHSANTSISSSPHSQQIFPSPQSEEARTKKGGLCETPPNGIRKKSKQARGGRENRATVPKGTKAD 659
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|553195773|ref|XP_005856205.1| (centromere v-like protein [Nannochloropsis gaditana CCMP526] >gi|422292853|gb|EKU20155.1| centromere v-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1144.03 bits (2958), Expect = 0.000e+0 Identity = 564/570 (98.95%), Postives = 567/570 (99.47%), Query Frame = 0
Query: 90 MTGKGGIFELIHHSGACMCGRFGFRLLAPADLKALDCPGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYEDLLGFPRGSREAAGATAAGDDPCRARAWERGKAAGPEDVSEGSRPKSHGGSSKVAAEGALVKKGWGQGVGVGSGTTWGGRVSGLVENALPFRNVFGGSGSSLGGKVRDGRGYHSSASVQTTGATSLLSHLLSRASLSMRPAPGGLLSIEAGGSAAEEEGLAESGSPAGSQETSPVMPTEGSADNMWLAWDESCEIRRDRGETDGVGRRGWGQPPPRRVTSSTRMLMSGVSELTVPLPGQSDAASQRVIGPAPGWERLGDGCTPPSMHQLRYHLKRHLKRRLNWLSSNGGGETGLGRGDLEEREDFGETRAYPGDQHFFQHHEHEPAPFIEEEETIHSAYGLKSRQVEGLPSKHQRRMTTPTPPPSPSVRSSFASTPATPLADATHKHSANTSISSSPHSQQIFPSPQSEEARTKKGGLCETPPNGIRKKSKQARGGRENRATVPKGTKAD 659
MTGKGGIFELIHHSGACMCGRFGFRLLAPADLKALDCPGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGH+VVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYEDLLGFPRGSREAAGATAAGDDPCRARAWERGKAAGPEDVSEGSRPKSHGGSSKVAAEGALVKKGWGQGVGVGSGTTWGGRVSGLVENALPFRNVFGGSGSSLGGKVRDG GYHSSASVQTTGATSLLSHLLSRASLSMRPAPGGLLSIEAGGSAAEEEGLAESGSPAGSQETSPVMPTEGSADNMWLAWDESCEIRRDRGETDGVGRRGWGQPPPRRVTSSTRMLMSGVSELTVPLPGQSDAASQRVIGPAPGWER+ DGCTPPSMHQLRYHLKRHLKRRLNWLSSNGGGETGLGRGDLEEREDFGETRAYPGDQHFFQHHEHEPAPFIEEEETIHSAYGLKSRQVEGLPSKHQRRMTTPTPPPSPSVRSSFASTPATPLADATHKHSANTSISSSPHSQQ+FPSPQSEEARTKKGGLC TPPNGIRKKSKQARGGRENRATVPKGTKAD
Sbjct: 1 MTGKGGIFELIHHSGACMCGRFGFRLLAPADLKALDCPGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHVVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYEDLLGFPRGSREAAGATAAGDDPCRARAWERGKAAGPEDVSEGSRPKSHGGSSKVAAEGALVKKGWGQGVGVGSGTTWGGRVSGLVENALPFRNVFGGSGSSLGGKVRDGCGYHSSASVQTTGATSLLSHLLSRASLSMRPAPGGLLSIEAGGSAAEEEGLAESGSPAGSQETSPVMPTEGSADNMWLAWDESCEIRRDRGETDGVGRRGWGQPPPRRVTSSTRMLMSGVSELTVPLPGQSDAASQRVIGPAPGWERVSDGCTPPSMHQLRYHLKRHLKRRLNWLSSNGGGETGLGRGDLEEREDFGETRAYPGDQHFFQHHEHEPAPFIEEEETIHSAYGLKSRQVEGLPSKHQRRMTTPTPPPSPSVRSSFASTPATPLADATHKHSANTSISSSPHSQQVFPSPQSEEARTKKGGLCGTPPNGIRKKSKQARGGRENRATVPKGTKAD 570
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|1200709297|gb|OUY03085.1| (aldehyde-activating protein [Alteromonadaceae bacterium TMED7]) HSP 1 Score: 73.9442 bits (180), Expect = 3.457e-12 Identity = 41/111 (36.94%), Postives = 54/111 (48.65%), Query Frame = 0
Query: 99 LIHHSGACMCGRFGFRLLAPADLKALDCPGPV----RYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEV 205
++ H+G+C CG F + AP DLK +C + Y H+ VPA F LQ + LT YT H H FC CG+ F D VNV CL AS+ S+E+
Sbjct: 1 MVEHAGSCHCGAIKFAVSAPTDLKVNECNCSICSKSGYLHLIVPADHFVLLQGEQCLTTYT----FNTHTARHLFCKICGIKPFYIPRSHPDGYSVNVRCLDEASVNSIEI 107
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|1125328683|gb|OLC69914.1| (aldehyde-activating protein [Deltaproteobacteria bacterium 13_1_40CM_4_54_4]) HSP 1 Score: 71.633 bits (174), Expect = 2.973e-11 Identity = 38/115 (33.04%), Postives = 55/115 (47.83%), Query Frame = 0
Query: 99 LIHHSGACMCGRFGFRLLAPADLKALDCPGPV----RYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYE 209
L+ H G C CGR F + APAD++A++C + + H+ VP S F +Q +LT YT + H FC CGV F D +NV C A I S+ + ++
Sbjct: 5 LVKHVGGCHCGRVKFEVQAPADIEAIECNCSICSKSGFLHLIVPKSRFVLIQGDEVLTTYT----FNTGVAKHRFCKVCGVKSFYIPRSNPDGYSINVRCFESAGISSIRIKPFD 115
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|1082687001|gb|OGA09730.1| (aldehyde-activating protein [Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14]) HSP 1 Score: 68.1662 bits (165), Expect = 4.302e-10 Identity = 44/129 (34.11%), Postives = 59/129 (45.74%), Query Frame = 0
Query: 99 LIHHSGACMCGRFGFRLLAPADLKALDC----PGPVRYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYY---EDLLGFPRGSRE 220
+I H+G C CGR F +LAPA L+ DC G Y H+ VPA F+ L L YT H H FC+ CGV F D VN CL ++ S+ + + E + +P+G E
Sbjct: 1 MIKHTGGCHCGRVRFEVLAPARLEVSDCNCSICGKAGYLHLVVPADRFKLLSGSDALQTYT----FNTHTAKHLFCSVCGVKSFYVPRSHPDGYSVNARCLDPGTVESLSIRQFNGREWEMQYPKGRGE 125
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|1034190194|ref|XP_016798309.1| (PREDICTED: centromere protein V-like [Pan troglodytes]) HSP 1 Score: 71.2478 bits (173), Expect = 6.593e-10 Identity = 46/136 (33.82%), Postives = 66/136 (48.53%), Query Frame = 0
Query: 83 FRARWGHMTGKGG------IFE---LIHHSGACMCGRFGFRLLAPADLKALDCPGPV----RYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEV 205
FR WG ++ +G FE L+HH+G C CG F + APADL+ +DC + ++ H VPAS F LQ + Y + H +H+FC+ CGV F A+ V CL ++RSV +
Sbjct: 121 FRKLWG-LSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIVTYRS----NTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVI 251
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|517801626|ref|WP_018971834.1| (hypothetical protein [Rudaea cellulosilytica]) HSP 1 Score: 67.3958 bits (163), Expect = 7.560e-10 Identity = 42/111 (37.84%), Postives = 53/111 (47.75%), Query Frame = 0
Query: 99 LIHHSGACMCGRFGFRLLAPADLKALDCPGPV----RYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEV 205
L+ H G C CG F + APA + ALDC + Y H+ VPA+ F+ L LT YT H FC CG+ F D + VNV CL A+I SV+V
Sbjct: 4 LVTHRGGCHCGAVRFEVDAPARIAALDCNCSICRMSGYIHLIVPATRFRLLAGAGALTEYT----FNTGTAKHRFCRICGIKSFYIPRSHPDGVDVNVHCLDAATIESVDV 110
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|686766151|ref|XP_009233133.1| (PREDICTED: centromere protein V-like [Pongo abelii]) HSP 1 Score: 70.4774 bits (171), Expect = 1.225e-9 Identity = 46/136 (33.82%), Postives = 66/136 (48.53%), Query Frame = 0
Query: 83 FRARWGHMTGKGG------IFE---LIHHSGACMCGRFGFRLLAPADLKALDCPGPV----RYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEV 205
FR WG ++ +G FE L+HH+G C CG F + APADL+ +DC + ++ H VPAS F LQ + Y + H +H+FC+ CGV F A+ V CL ++RSV +
Sbjct: 121 FRKLWG-LSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFVVPASRFTLLQGAESIVTYRS----NTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVI 251
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|1064146114|gb|ODU44862.1| (aldehyde-activating protein [Xanthomonadaceae bacterium SCN 69-123]) HSP 1 Score: 67.0106 bits (162), Expect = 1.304e-9 Identity = 42/115 (36.52%), Postives = 57/115 (49.57%), Query Frame = 0
Query: 99 LIHHSGACMCGRFGFRLLAPADLKALDCPGPVR----YPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEVTYYE 209
LI H+G C CG F + APAD++A+DC + + H+ VPAS F+ L D +T Y+ G H FC CG+ + D VNV CL A+I SV T +
Sbjct: 5 LITHTGGCHCGAVRFEVDAPADIEAVDCNCSLCAMTGFLHLIVPASRFRLLSDPAAMTEYS----FGTGTARHFFCAICGIKSWYVPRSNPDGFDVNVRCLDPATIASVRATPFN 115
BLAST of EWM30529.1 vs. NCBI_GenBank
Match: gi|1044450601|ref|XP_017376520.1| (PREDICTED: centromere protein V-like [Cebus capucinus imitator] >gi|1044450603|ref|XP_017376521.1| PREDICTED: centromere protein V-like [Cebus capucinus imitator]) HSP 1 Score: 70.0922 bits (170), Expect = 1.304e-9 Identity = 46/136 (33.82%), Postives = 66/136 (48.53%), Query Frame = 0
Query: 83 FRARWGHMTGKGG------IFE---LIHHSGACMCGRFGFRLLAPADLKALDCPGPV----RYPHVFVPASAFQPLQDLRLLTLYTARGLLGGHIVVHAFCTACGVPIFRASDGAIDTLVVNVECLHGASIRSVEV 205
FR WG ++ +G FE L+HH+G C CG F + APADL+ +DC + ++ H VPAS F LQ + Y + H +H+FC+ CGV F A+ V CL ++RSV +
Sbjct: 106 FRKLWG-LSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGADSIVTYRS----NTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVI 236 The following BLAST results are available for this feature:
BLAST of EWM30529.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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