EWM28915.1, cds1758 (CDS) Nannochloropsis gaditana

Overview
NameEWM28915.1
Unique Namecds1758
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:62548..62886 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28915.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_104160g1.4628.mrna
GbkeyCDS
End range.
End range62886
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:62548..62886 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM28915.1 vs. NCBI_GenBank
Match: gi|585111377|gb|EWM28915.1| (hypothetical protein Naga_104160g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 224.172 bits (570), Expect = 4.096e-74
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 
Query:    1 GGGLLREGSGGGREGWTQPLLVLLAALTWWLECQMPFMGILRFWVHNPLLPCSPPSHPPALLPSFQATVLAHGTKQDASNPAHAGGGIAANTRSTEPSLAAAAVEGNGAFDG 112
            GGGLLREGSGGGREGWTQPLLVLLAALTWWLECQMPFMGILRFWVHNPLLPCSPPSHPPALLPSFQATVLAHGTKQDASNPAHAGGGIAANTRSTEPSLAAAAVEGNGAFDG
Sbjct:    1 GGGLLREGSGGGREGWTQPLLVLLAALTWWLECQMPFMGILRFWVHNPLLPCSPPSHPPALLPSFQATVLAHGTKQDASNPAHAGGGIAANTRSTEPSLAAAAVEGNGAFDG 112
The following BLAST results are available for this feature:
BLAST of EWM28915.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111377|gb|EWM28915.1|4.096e-74100.00hypothetical protein Naga_104160g1, partial [Nanno... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1762rna1762Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications