EWM28920.1, cds1754 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28920.1 vs. NCBI_GenBank
Match: gi|585111384|gb|EWM28920.1| (hypothetical protein Naga_100441g3 [Nannochloropsis gaditana]) HSP 1 Score: 1711.04 bits (4430), Expect = 0.000e+0 Identity = 849/849 (100.00%), Postives = 849/849 (100.00%), Query Frame = 0
Query: 1 MSPAGKIESLEACGRGKSPATAPKHALQHATGKVQAAGGTSVFAPPPATTSHERVLDGATEGLKPDMEEREWVTWHKPWARFDNPEMACDFEAMPLEKRHDYLIQGATALDHALTPLPKMKGHRHTLEAMLQLVRDDFETQRPMSEDARLAWRSALELTRRNRGPKVDEVFKCVVDCLVFLLHTRRVPDFPRQYLERVVRGMMKDYAVGLGVNNVARLAAVFEDMTPALIRARAAALRAGAQGKKTSECFERIMDVLREEKMETQAREGQVDAITEGLSPLEREIQAHGLDVDDARVVACFVTGDPAFLSTHTLHDWMRIWKKVREKCRYLLQGDFGRKNQSVIESLVAMAGDSKSGRKQSGTASLSRKRSDETSTSGQDGFGGVEEQRKRAKGGKKTIKVEKVGPGEALKEGDSHPEEKPTAYAPFEDYQYLLLLKKRCLESPRGGEGAGIMAGNASATLSAAPVPVPEAFPSHTPTPPPSTPPPTSLPTHSHESLAPRQSAALLNTLPTAASWRQPPGRGITTGSTGMTALARGAATLRADAGAAPASFLSDVSRHGETTAGGSLSTDALMRPPHAGGAGTAPAPSISTLAKVRASSAAASSGSPTRKAATGAPKVQPPPGPPSVTTEPTTDAWAPRDSPVRSVRALLSKGKATLAPTTTVTRSLPAHSTITKAAGRQECLPAEAAATATTAHMVSFPPHVTATTTTTATPSLGTEEKVVTTTKATTASANSRDAGIPTPPSWNGPVATARAPTWPCVRPPSSPPRVMGSIPSPSLQSASVPKRDLSLGAASPSTDPTPSVTTTTATKTTTETVKSQTATALTEIVTTVTTITTTTTTTTPCEAFNA 849
MSPAGKIESLEACGRGKSPATAPKHALQHATGKVQAAGGTSVFAPPPATTSHERVLDGATEGLKPDMEEREWVTWHKPWARFDNPEMACDFEAMPLEKRHDYLIQGATALDHALTPLPKMKGHRHTLEAMLQLVRDDFETQRPMSEDARLAWRSALELTRRNRGPKVDEVFKCVVDCLVFLLHTRRVPDFPRQYLERVVRGMMKDYAVGLGVNNVARLAAVFEDMTPALIRARAAALRAGAQGKKTSECFERIMDVLREEKMETQAREGQVDAITEGLSPLEREIQAHGLDVDDARVVACFVTGDPAFLSTHTLHDWMRIWKKVREKCRYLLQGDFGRKNQSVIESLVAMAGDSKSGRKQSGTASLSRKRSDETSTSGQDGFGGVEEQRKRAKGGKKTIKVEKVGPGEALKEGDSHPEEKPTAYAPFEDYQYLLLLKKRCLESPRGGEGAGIMAGNASATLSAAPVPVPEAFPSHTPTPPPSTPPPTSLPTHSHESLAPRQSAALLNTLPTAASWRQPPGRGITTGSTGMTALARGAATLRADAGAAPASFLSDVSRHGETTAGGSLSTDALMRPPHAGGAGTAPAPSISTLAKVRASSAAASSGSPTRKAATGAPKVQPPPGPPSVTTEPTTDAWAPRDSPVRSVRALLSKGKATLAPTTTVTRSLPAHSTITKAAGRQECLPAEAAATATTAHMVSFPPHVTATTTTTATPSLGTEEKVVTTTKATTASANSRDAGIPTPPSWNGPVATARAPTWPCVRPPSSPPRVMGSIPSPSLQSASVPKRDLSLGAASPSTDPTPSVTTTTATKTTTETVKSQTATALTEIVTTVTTITTTTTTTTPCEAFNA
Sbjct: 1 MSPAGKIESLEACGRGKSPATAPKHALQHATGKVQAAGGTSVFAPPPATTSHERVLDGATEGLKPDMEEREWVTWHKPWARFDNPEMACDFEAMPLEKRHDYLIQGATALDHALTPLPKMKGHRHTLEAMLQLVRDDFETQRPMSEDARLAWRSALELTRRNRGPKVDEVFKCVVDCLVFLLHTRRVPDFPRQYLERVVRGMMKDYAVGLGVNNVARLAAVFEDMTPALIRARAAALRAGAQGKKTSECFERIMDVLREEKMETQAREGQVDAITEGLSPLEREIQAHGLDVDDARVVACFVTGDPAFLSTHTLHDWMRIWKKVREKCRYLLQGDFGRKNQSVIESLVAMAGDSKSGRKQSGTASLSRKRSDETSTSGQDGFGGVEEQRKRAKGGKKTIKVEKVGPGEALKEGDSHPEEKPTAYAPFEDYQYLLLLKKRCLESPRGGEGAGIMAGNASATLSAAPVPVPEAFPSHTPTPPPSTPPPTSLPTHSHESLAPRQSAALLNTLPTAASWRQPPGRGITTGSTGMTALARGAATLRADAGAAPASFLSDVSRHGETTAGGSLSTDALMRPPHAGGAGTAPAPSISTLAKVRASSAAASSGSPTRKAATGAPKVQPPPGPPSVTTEPTTDAWAPRDSPVRSVRALLSKGKATLAPTTTVTRSLPAHSTITKAAGRQECLPAEAAATATTAHMVSFPPHVTATTTTTATPSLGTEEKVVTTTKATTASANSRDAGIPTPPSWNGPVATARAPTWPCVRPPSSPPRVMGSIPSPSLQSASVPKRDLSLGAASPSTDPTPSVTTTTATKTTTETVKSQTATALTEIVTTVTTITTTTTTTTPCEAFNA 849
BLAST of EWM28920.1 vs. NCBI_GenBank
Match: gi|553183836|ref|XP_005853977.1| (hypothetical protein NGA_0502300 [Nannochloropsis gaditana CCMP526] >gi|422295086|gb|EKU22385.1| hypothetical protein NGA_0502300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 877.856 bits (2267), Expect = 0.000e+0 Identity = 424/439 (96.58%), Postives = 424/439 (96.58%), Query Frame = 0
Query: 1 MSPAGKIESLEACGRGKSPATAPKHALQHATGKVQAAGGTSVFAPPPATTSHERVLDGATEGLKPDMEEREWVTWHKPWARFDNPEMACDFEAMPLEKRHDYLIQGATALDHALTPLPKMKGHRHTLEAMLQLVRDDFETQRPMSEDARLAWRSALELTRRNRGPKVDEVFKCVVDCLVFLLHTRRVPDFPRQYLERVVRGMMKDYAVGLGVNNVARLAAVFEDMTPALIRARAAALRAGAQGKKTSECFERIMDVLREEKMETQAREGQVDAITEGLSPLEREIQAHGLDVDDARVVACFVTGDPAFLSTHTLHDWMRIWKKVREKCRYLLQGDFGRKNQSVIESLVAMAGDSKSGRKQSGTASLSRKRSDETSTSGQDGFGGVEEQRKRAKGGKKTIKVEKVGPGEALKEGDSHPEEKPTAYAPFEDYQYLLLLKKR 439
MSPAGKIESLEACGRGKSPATAPKHALQHATGKVQAAGGTSVFAPPPATTSHERVLDGATEGLKPDMEEREWVTWHKPWARFDNPEMACDFEAMPLEKRHDYLIQGATALDHALTPLPKMKGHRHTLEAMLQLVRDDFETQRPMSEDARLAWRSALELTRRNRGPKVDEVFK RVPDFPRQYLERVVRGMMKDYAVGLGVNNVARLAAVFEDMTPALIRARAAALRAGAQGKKTSECFERIMDVLREEKME AREGQVDAITEGLSPLEREIQAHGLDVDDARVVACFVTGDPAFLSTHTLHDWMRIWKKVREKCRYLLQGDFGRKNQSVIESLVAMAGDSKSGRKQSGTASLSRKRSDETSTSGQDGFGGVEEQRKRAKGGKKTIKVEKVGPGEALKEGDSHPEEKPTAYAPFEDYQYLLLLKKR
Sbjct: 1 MSPAGKIESLEACGRGKSPATAPKHALQHATGKVQAAGGTSVFAPPPATTSHERVLDGATEGLKPDMEEREWVTWHKPWARFDNPEMACDFEAMPLEKRHDYLIQGATALDHALTPLPKMKGHRHTLEAMLQLVRDDFETQRPMSEDARLAWRSALELTRRNRGPKVDEVFK-------------RVPDFPRQYLERVVRGMMKDYAVGLGVNNVARLAAVFEDMTPALIRARAAALRAGAQGKKTSECFERIMDVLREEKME--AREGQVDAITEGLSPLEREIQAHGLDVDDARVVACFVTGDPAFLSTHTLHDWMRIWKKVREKCRYLLQGDFGRKNQSVIESLVAMAGDSKSGRKQSGTASLSRKRSDETSTSGQDGFGGVEEQRKRAKGGKKTIKVEKVGPGEALKEGDSHPEEKPTAYAPFEDYQYLLLLKKR 424 The following BLAST results are available for this feature:
BLAST of EWM28920.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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