EWM28928.1, cds1742 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28928.1 vs. NCBI_GenBank
Match: gi|585111394|gb|EWM28928.1| (thioredoxin-dependent peroxide reductase [Nannochloropsis gaditana]) HSP 1 Score: 485.723 bits (1249), Expect = 1.656e-173 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
Query: 1 MIMRNIARVGINVLVRPPVVDGELTKISLADYKGKYVALLFYPKDFTFVCPTEIIAYSDAAHRFEEIGAKVIGISTDTEESHLAWVRTPRKRGGLGHMQIPLVADVTKTIAADYGVLLEDIGIALRGLFLIDPEGVLQQITVNNLPVGRNVDETIRLIQAFQFVAKHGEVRGDGSLKEQKGGSRKRGEDGGRRDREWGGARGALEGGSLPTVETGIAAQGASPRGRPWHEAVVVRRASGIF 241
MIMRNIARVGINVLVRPPVVDGELTKISLADYKGKYVALLFYPKDFTFVCPTEIIAYSDAAHRFEEIGAKVIGISTDTEESHLAWVRTPRKRGGLGHMQIPLVADVTKTIAADYGVLLEDIGIALRGLFLIDPEGVLQQITVNNLPVGRNVDETIRLIQAFQFVAKHGEVRGDGSLKEQKGGSRKRGEDGGRRDREWGGARGALEGGSLPTVETGIAAQGASPRGRPWHEAVVVRRASGIF
Sbjct: 1 MIMRNIARVGINVLVRPPVVDGELTKISLADYKGKYVALLFYPKDFTFVCPTEIIAYSDAAHRFEEIGAKVIGISTDTEESHLAWVRTPRKRGGLGHMQIPLVADVTKTIAADYGVLLEDIGIALRGLFLIDPEGVLQQITVNNLPVGRNVDETIRLIQAFQFVAKHGEVRGDGSLKEQKGGSRKRGEDGGRRDREWGGARGALEGGSLPTVETGIAAQGASPRGRPWHEAVVVRRASGIF 241
BLAST of EWM28928.1 vs. NCBI_GenBank
Match: gi|302852793|ref|XP_002957915.1| (hypothetical protein VOLCADRAFT_68651 [Volvox carteri f. nagariensis] >gi|300256792|gb|EFJ41051.1| hypothetical protein VOLCADRAFT_68651, partial [Volvox carteri f. nagariensis]) HSP 1 Score: 237.269 bits (604), Expect = 1.731e-75 Identity = 105/152 (69.08%), Postives = 129/152 (84.87%), Query Frame = 0
Query: 19 VVDGELTKISLADYKGKYVALLFYPKDFTFVCPTEIIAYSDAAHRFEEIGAKVIGISTDTEESHLAWVRTPRKRGGLGHMQIPLVADVTKTIAADYGVLLEDIGIALRGLFLIDPEGVLQQITVNNLPVGRNVDETIRLIQAFQFVAKHGEV 170
VVDGE+TKISLADY+GKYV L FYPKDFTFVCPTEIIA+SD A FE + ++I STDTEE HLAW+R PR RGGLG MQIP++AD TK I+A YGVL+E +GIALRGLF+I+P+GV+Q +T+N+LP+GR+VDE +R +QA QF A+HGEV
Sbjct: 3 VVDGEITKISLADYRGKYVCLFFYPKDFTFVCPTEIIAFSDRAKEFEALNCQLIAASTDTEECHLAWIRNPRNRGGLGFMQIPILADTTKAISARYGVLIEQLGIALRGLFIINPQGVVQHVTINDLPIGRSVDEALRTLQAIQFHAQHGEV 154
BLAST of EWM28928.1 vs. NCBI_GenBank
Match: gi|298714597|emb|CBJ27588.1| (2-cys peroxiredoxin [Ectocarpus siliculosus]) HSP 1 Score: 241.506 bits (615), Expect = 4.641e-75 Identity = 116/184 (63.04%), Postives = 143/184 (77.72%), Query Frame = 0
Query: 19 VVDGELTKISLADYKGKYVALLFYPKDFTFVCPTEIIAYSDAAHRFEEIGAKVIGISTDTEESHLAWVRTPRKRGGLGHMQIPLVADVTKTIAADYGVLLEDIGIALRGLFLIDPEGVLQQITVNNLPVGRNVDETIRLIQAFQFVAKHGEV------RGDGSLKEQKGGSRKRGEDGGRRDRE 196
VVDG++ +S DYKGK+V LLFYPKD+TFVCPTEIIA+SD FE +GA+V+GISTDTE+SHLAW R PRKRGGLGHM+IPLVAD TK I+ADYGVL+ +GIALRGLF+I+PEG+L+Q+T+NNL +GR+VDET+RLIQA QF+AKHGEV GD ++K S + G E
Sbjct: 88 VVDGDIVDVSTDDYKGKWVVLLFYPKDWTFVCPTEIIAFSDRHSEFEALGAQVLGISTDTEDSHLAWTRHPRKRGGLGHMRIPLVADPTKEISADYGVLIPSLGIALRGLFIINPEGILEQVTINNLGIGRDVDETLRLIQAHQFLAKHGEVCPAGWKPGDKTMKPGLDASMEYFSSGATESEE 271
BLAST of EWM28928.1 vs. NCBI_GenBank
Match: gi|159465035|ref|XP_001690737.1| (peroxiredoxin [Chlamydomonas reinhardtii] >gi|158270361|gb|EDO96214.1| peroxiredoxin, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 234.572 bits (597), Expect = 5.160e-75 Identity = 104/158 (65.82%), Postives = 132/158 (83.54%), Query Frame = 0
Query: 13 VLVRPPVVDGELTKISLADYKGKYVALLFYPKDFTFVCPTEIIAYSDAAHRFEEIGAKVIGISTDTEESHLAWVRTPRKRGGLGHMQIPLVADVTKTIAADYGVLLEDIGIALRGLFLIDPEGVLQQITVNNLPVGRNVDETIRLIQAFQFVAKHGEV 170
+ V VVDGE+TKISL+DYKGKYV L FYPKDFTFVCPTEIIA+SD A F ++I STDTEE+HLAW+RTPR RGGLG+MQIP++AD TK I+A YGVL+E +G+ALRGLF+I+P+GV+Q +T+N+LP+GR+VDE +R +QA Q+ A+HGEV
Sbjct: 2 MFVSAAVVDGEITKISLSDYKGKYVCLFFYPKDFTFVCPTEIIAFSDRAKEFAAANCQLIAASTDTEETHLAWIRTPRNRGGLGYMQIPILADTTKDISARYGVLIEKLGVALRGLFIINPQGVVQHVTINDLPIGRSVDEALRTLQAIQYHAEHGEV 159
BLAST of EWM28928.1 vs. NCBI_GenBank
Match: gi|1205893448|gb|OWF43851.1| (Thioredoxin-dependent peroxide reductase, mitochondrial [Mizuhopecten yessoensis]) HSP 1 Score: 236.113 bits (601), Expect = 8.833e-75 Identity = 112/176 (63.64%), Postives = 137/176 (77.84%), Query Frame = 0
Query: 19 VVDGELTKISLADYKGKYVALLFYPKDFTFVCPTEIIAYSDAAHRFEEIGAKVIGISTDTEESHLAWVRTPRKRGGLGHMQIPLVADVTKTIAADYGVLLEDIGIALRGLFLIDPEGVLQQITVNNLPVGRNVDETIRLIQAFQFVAKHGEVRG------DGSLKEQKGGSRKRGE 188
VVDG+ ISLAD+KGKYV L FYP DFTFVCPTEIIA+SD RF ++ +VIG+STD+ SHLAW+ TPRK+GGLG + PL+AD K I+ DYGVLLED G+ALRGLFLIDPEGV++Q+T+N+LPVGR+VDETIRLIQAFQFV KHGEV + ++K GS++ E
Sbjct: 71 VVDGQFKNISLADFKGKYVVLFFYPLDFTFVCPTEIIAFSDNMQRFRDLNTEVIGVSTDSHFSHLAWINTPRKQGGLGGLNYPLLADFKKEISRDYGVLLEDAGVALRGLFLIDPEGVVRQMTINDLPVGRSVDETIRLIQAFQFVEKHGEVCPANWKPEEATIKPDPAGSKEYFE 246
BLAST of EWM28928.1 vs. NCBI_GenBank
Match: gi|1207953651|ref|XP_021366926.1| (peroxiredoxin-like [Mizuhopecten yessoensis]) HSP 1 Score: 236.113 bits (601), Expect = 9.318e-75 Identity = 112/176 (63.64%), Postives = 137/176 (77.84%), Query Frame = 0
Query: 19 VVDGELTKISLADYKGKYVALLFYPKDFTFVCPTEIIAYSDAAHRFEEIGAKVIGISTDTEESHLAWVRTPRKRGGLGHMQIPLVADVTKTIAADYGVLLEDIGIALRGLFLIDPEGVLQQITVNNLPVGRNVDETIRLIQAFQFVAKHGEVRG------DGSLKEQKGGSRKRGE 188
VVDG+ ISLAD+KGKYV L FYP DFTFVCPTEIIA+SD RF ++ +VIG+STD+ SHLAW+ TPRK+GGLG + PL+AD K I+ DYGVLLED G+ALRGLFLIDPEGV++Q+T+N+LPVGR+VDETIRLIQAFQFV KHGEV + ++K GS++ E
Sbjct: 71 VVDGQFKNISLADFKGKYVVLFFYPLDFTFVCPTEIIAFSDNMQRFRDLNTEVIGVSTDSHFSHLAWINTPRKQGGLGGLNYPLLADFKKEISRDYGVLLEDAGVALRGLFLIDPEGVVRQMTINDLPVGRSVDETIRLIQAFQFVEKHGEVCPANWKPEEATIKPDPAGSKEYFE 246
BLAST of EWM28928.1 vs. NCBI_GenBank
Match: gi|1183497054|gb|ORZ20708.1| (thioredoxin-like protein [Absidia repens]) HSP 1 Score: 235.343 bits (599), Expect = 2.430e-74 Identity = 111/175 (63.43%), Postives = 136/175 (77.71%), Query Frame = 0
Query: 17 PPVVDGELTKISLADYKGKYVALLFYPKDFTFVCPTEIIAYSDAAHRFEEIGAKVIGISTDTEESHLAWVRTPRKRGGLGHMQIPLVADVTKTIAADYGVLLEDIGIALRGLFLIDPEGVLQQITVNNLPVGRNVDETIRLIQAFQFVAKHGEV------RGDGSLKEQKGGSRK 185
P VVDGE +SL+DYKGKYV +YP DFTFVCPTEIIA+SD FE + VIG STD+E SHLAW+ TPRK GGLG M+IPLVAD TK+IA YGVLLE+ G+ALRGLF+IDP+GVL+QITVN+LPVGR+VDET+RL+QAF+F +HGEV +GD ++K S++
Sbjct: 73 PAVVDGEFKDVSLSDYKGKYVVFFWYPMDFTFVCPTEIIAFSDRIKEFEALDCAVIGASTDSEFSHLAWINTPRKEGGLGDMKIPLVADKTKSIAKSYGVLLENAGVALRGLFIIDPKGVLRQITVNDLPVGRSVDETLRLVQAFKFTDEHGEVCPAGWNQGDKTIKPSVKDSKE 247
BLAST of EWM28928.1 vs. NCBI_GenBank
Match: gi|1032150944|gb|OAO14619.1| (thioredoxin-dependent peroxide reductase [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 237.269 bits (604), Expect = 7.102e-74 Identity = 102/154 (66.23%), Postives = 132/154 (85.71%), Query Frame = 0
Query: 17 PPVVDGELTKISLADYKGKYVALLFYPKDFTFVCPTEIIAYSDAAHRFEEIGAKVIGISTDTEESHLAWVRTPRKRGGLGHMQIPLVADVTKTIAADYGVLLEDIGIALRGLFLIDPEGVLQQITVNNLPVGRNVDETIRLIQAFQFVAKHGEV 170
P VVD ++T ++L DY+GKYV L FYPKDFTFVCPTEIIA+SD A FE++ K++ S DT ESHLAW++TPRK+GGLG+MQIP++ D TK IA+ YGVL+ D+G+ALRGLF+I+P+GV++QIT+NNLPVGR+VDE +RL+QAFQFV +HGEV
Sbjct: 53 PAVVDNDITTVNLEDYRGKYVVLFFYPKDFTFVCPTEIIAFSDRAQEFEKLNTKLLACSCDTVESHLAWIKTPRKKGGLGNMQIPIIGDNTKEIASKYGVLVNDLGVALRGLFIINPQGVIEQITMNNLPVGRSVDEVLRLVQAFQFVEQHGEV 206
BLAST of EWM28928.1 vs. NCBI_GenBank
Match: gi|961090751|ref|XP_014771915.1| (PREDICTED: peroxiredoxin-2-like [Octopus bimaculoides] >gi|918321234|gb|KOF89260.1| hypothetical protein OCBIM_22013391mg [Octopus bimaculoides]) HSP 1 Score: 232.261 bits (591), Expect = 1.884e-73 Identity = 105/152 (69.08%), Postives = 130/152 (85.53%), Query Frame = 0
Query: 19 VVDGELTKISLADYKGKYVALLFYPKDFTFVCPTEIIAYSDAAHRFEEIGAKVIGISTDTEESHLAWVRTPRKRGGLGHMQIPLVADVTKTIAADYGVLLEDIGIALRGLFLIDPEGVLQQITVNNLPVGRNVDETIRLIQAFQFVAKHGEV 170
VV+GE I LADYKGKY+ L FYP DFTFVCPTEIIA+SD +F+EI A+V+G+S D+ SHLAW+ TPRK GGLG ++ PL++D++K IA+DYGVLLE+ GIALRGLF+IDP G+L+QIT+N+LPVGR+VDETIRLI+AFQFV KHGEV
Sbjct: 54 VVNGEFKDIKLADYKGKYLVLFFYPLDFTFVCPTEIIAFSDNIKKFKEINAEVVGVSIDSHFSHLAWINTPRKEGGLGQLKYPLLSDLSKQIASDYGVLLENPGIALRGLFIIDPNGILRQITINDLPVGRSVDETIRLIKAFQFVEKHGEV 205
BLAST of EWM28928.1 vs. NCBI_GenBank
Match: gi|923123285|ref|XP_013755111.1| (peroxiredoxin [Thecamonas trahens ATCC 50062] >gi|906559559|gb|KNC52802.1| peroxiredoxin [Thecamonas trahens ATCC 50062]) HSP 1 Score: 230.72 bits (587), Expect = 3.151e-73 Identity = 108/176 (61.36%), Postives = 139/176 (78.98%), Query Frame = 0
Query: 19 VVDGELTKISLADYKGKYVALLFYPKDFTFVCPTEIIAYSDAAHRFEEIGAKVIGISTDTEESHLAWVRTPRKRGGLGHMQIPLVADVTKTIAADYGVLLEDIGIALRGLFLIDPEGVLQQITVNNLPVGRNVDETIRLIQAFQFVAKHGEV------RGDGSLKEQKGGSRKRGE 188
VVDG+ KISL DYKG+++ FYP DFTFVCPTEIIA+SD F+ IGA+V+G S D+E SHLAW+ TPRK+GGLG M+IPL++D+TK ++ DYGVLLED GI+LRGLF+IDP G L+QITVN+LPVGR+VDET+RLI+AFQFV +HGEV G+ ++K + S++ E
Sbjct: 24 VVDGDFKKISLDDYKGQWLVFFFYPLDFTFVCPTEIIAFSDRVEEFKAIGAEVVGCSVDSEFSHLAWINTPRKQGGLGEMKIPLLSDITKQVSRDYGVLLEDEGISLRGLFIIDPTGTLRQITVNDLPVGRSVDETLRLIKAFQFVEEHGEVCPANWTPGESTIKPEVAASKEYFE 199 The following BLAST results are available for this feature:
BLAST of EWM28928.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|