EWM28950.1, cds1724 (CDS) Nannochloropsis gaditana

Overview
NameEWM28950.1
Unique Namecds1724
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1358293..1358392 -
Alignment locationCM002457.1:1357551..1358099 -
Alignment locationCM002457.1:1357022..1357276 -
Alignment locationCM002457.1:1356661..1356771 -
Alignment locationCM002457.1:1356342..1356535 -
Alignment locationCM002457.1:1356135..1356203 -
Alignment locationCM002457.1:1355724..1355900 -
Alignment locationCM002457.1:1355517..1355607 -
Alignment locationCM002457.1:1355216..1355334 -
Alignment locationCM002457.1:1355022..1355126 -
Alignment locationCM002457.1:1354820..1354868 -
Alignment locationCM002457.1:1354490..1354656 -
Alignment locationCM002457.1:1354323..1354373 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28950.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100389g2.6884.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1358293..1358392 -
CM002457.1supercontigCM002457.1:1357551..1358099 -
CM002457.1supercontigCM002457.1:1357022..1357276 -
CM002457.1supercontigCM002457.1:1356661..1356771 -
CM002457.1supercontigCM002457.1:1356342..1356535 -
CM002457.1supercontigCM002457.1:1356135..1356203 -
CM002457.1supercontigCM002457.1:1355724..1355900 -
CM002457.1supercontigCM002457.1:1355517..1355607 -
CM002457.1supercontigCM002457.1:1355216..1355334 -
CM002457.1supercontigCM002457.1:1355022..1355126 -
CM002457.1supercontigCM002457.1:1354820..1354868 -
CM002457.1supercontigCM002457.1:1354490..1354656 -
CM002457.1supercontigCM002457.1:1354323..1354373 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003887DNA-directed DNA polymerase activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR007185DNA_pol_alpha/epsilon_bsu
IPR013627Pol_alpha_B_N
Homology
BLAST of EWM28950.1 vs. NCBI_GenBank
Match: gi|585111424|gb|EWM28950.1| (hypothetical protein Naga_100389g2 [Nannochloropsis gaditana])

HSP 1 Score: 1375.53 bits (3559), Expect = 0.000e+0
Identity = 678/678 (100.00%), Postives = 678/678 (100.00%), Query Frame = 0
Query:    1 MTGTGSAVKEGEVLNAFQEINEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGGATVTPAASTRRSGRASFDPSTLPSTEQAMRKRLSLSEDPASAEKWPGAGAFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTPSAAASTPAPMLTPGGLSSTSSPPLSAGGATAYLNRTNAGQKAGTLPGALDINLPSRYRFMYTTLEERARAQEKMLLRLQDDLVARGLEAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHDHPPLADRIPGGVPSPWFEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSYNPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEVQHEVARRTHAEIVRI 678
            MTGTGSAVKEGEVLNAFQEINEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGGATVTPAASTRRSGRASFDPSTLPSTEQAMRKRLSLSEDPASAEKWPGAGAFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTPSAAASTPAPMLTPGGLSSTSSPPLSAGGATAYLNRTNAGQKAGTLPGALDINLPSRYRFMYTTLEERARAQEKMLLRLQDDLVARGLEAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHDHPPLADRIPGGVPSPWFEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSYNPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEVQHEVARRTHAEIVRI
Sbjct:    1 MTGTGSAVKEGEVLNAFQEINEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGGATVTPAASTRRSGRASFDPSTLPSTEQAMRKRLSLSEDPASAEKWPGAGAFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTPSAAASTPAPMLTPGGLSSTSSPPLSAGGATAYLNRTNAGQKAGTLPGALDINLPSRYRFMYTTLEERARAQEKMLLRLQDDLVARGLEAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHDHPPLADRIPGGVPSPWFEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSYNPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEVQHEVARRTHAEIVRI 678          
BLAST of EWM28950.1 vs. NCBI_GenBank
Match: gi|299117538|emb|CBN75382.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 496.508 bits (1277), Expect = 6.542e-164
Identity = 309/706 (43.77%), Postives = 411/706 (58.22%), Query Frame = 0
Query:    6 SAVKEGEVLNAFQEINEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGGATVTPAASTRRSGRASFDPST-----LPSTEQAMRKRLSL--SEDPASAEKWPGAGAFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTPSAAASTPAPMLTPGGLSSTSSPPLSAGGATAYLNRTNAGQKAGTL-PGALDINLPSRYRFMYTTLEERARAQEKMLLRLQDDLVAR-GLEAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHD----HPPLADRIPGGVP--SPWFEEERLGDLGLPFASEKDGA----------DKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSY--NPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERM------SPETEVQHEVARRTHAEIVRI 678
            +AV E EV  +F +I ED   K + + KC+S+     LSA DLA+ WE+ A+N    D S+  L +SS    E  ++K    A         +      AS   S      + +   A R+ ++   SED AS+        F SP+P       R     G G    P +    P    +  +     G  +++ +P L   G +   +   AG +   +  GA  +  P+RYR+MYT LEERA A EK L+ LQ  +  + GL    E+TPVGVP+QE V  +GRVCCE+ EG+IN+AS+LLEGSRRDS G R  L+L +L +F+LFPGQVVAV+GVN SG +MV R II+G+PRP  +S    +L  QH +   GG ALS+  AAGP+TT+DSL YEPL DLL  + A +PDV VL GPFVD+ HP+VASG+  I       ESVDFE+LF++R+S  L+ L+  +  L ++ VLVPSL DVFH+     PP  DR+ GGV      + EER+  L +P    +  +           KR++   NP++  VNEV +GV++ D L  LSGDEVS      NRLARLA HLLQQQSF+PLFPPPA   AQLD+RHA    MP TPDVLL+PS+L  F + V G LC+NPG L+KG GGGTYA L +HP+P E L +        P+  V+H+VA+RT  EI RI
Sbjct:    2 AAVTESEVAGSFSKIGEDPSDK-DFIGKCVSLCQRFSLSAGDLADHWESFAVNH---DGSR--LGMSSWAGFETEVAKSKAAASTPPAASTGTASTPSAASRSSSRPSSASIVTPRPAGRRVVNTVTSEDLASSGTKRPMLPFSSPNPKARSKLARQDGEGGDGASLSPTSVQSPPDLVRAVYSSRKNAGQKTASYNPALGLRGLSVAPSPRQAGTRCDVVVDGA--VGAPARYRYMYTPLEERAAALEKGLVALQGQMERKFGL---TEITPVGVPRQEQVVAVGRVCCESTEGKINRASILLEGSRRDSSGQRAHLDLRELQSFALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRAQHGAELGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDSEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDKLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGARTTSGGASAAAAARQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQGCLCVNPGQLSKGTGGGTYAELAVHPMPQETLAKKQEELADKPDATVEHDVAKRTCVEIRRI 696          
BLAST of EWM28950.1 vs. NCBI_GenBank
Match: gi|553192434|ref|XP_005855569.1| (DNA polymerase alpha subunit B, partial [Nannochloropsis gaditana CCMP526] >gi|422293484|gb|EKU20784.1| DNA polymerase alpha subunit B, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 369.777 bits (948), Expect = 1.969e-121
Identity = 176/179 (98.32%), Postives = 176/179 (98.32%), Query Frame = 0
Query:  485 HPPLADRIPGGVPSPWFEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSYNPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEV 663
             PPLADRIPGGVPSPWFEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSYNPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADH RMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETE 
Sbjct:   34 QPPLADRIPGGVPSPWFEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSYNPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHWRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEF 212          
BLAST of EWM28950.1 vs. NCBI_GenBank
Match: gi|223998634|ref|XP_002288990.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976098|gb|EED94426.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 383.645 bits (984), Expect = 6.256e-120
Identity = 256/712 (35.96%), Postives = 378/712 (53.09%), Query Frame = 0
Query:   28 AEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGGATVTPAASTRR------SG---RASFDPSTLPSTEQAMRKRLSLSEDPASAEKWPGAGAFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTPSAAASTPAPMLTPGGLSSTSSPPLSAGGATAYLNRTNAG----QKAGTL---PGALDINLPSR---YRFMYTTLEERARAQEKMLLRLQDDLVAR-GLEAE-----------AEV--------TPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQL-------PAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVF----HDHPPLADR-IPGGVPSPWFEEERLGDLGLPFAS-------EKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSYN--PGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDV-GGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEVQHEVARRTHAEIVRI 678
            A +V K   +   L L+ R LA  WEAH++ R  D     +L+  + G  ++ L+K     G    +   S R       SG   R +   S  PS    M KR + +   AS    P   + LS   +      + P S G       +A   TP+A ++      T  G   TS  P S   A   +N  NA     QK  T+   P +     P++   +R M+T L  RA+A E  +L + D +  +  +++E           AEV        TPVG+PKQ  V  +GR+C EA EGR+N+AS+ LEGSR+DS G R+ L+L  L        ++S FPGQ+VAVEG+NSSG  M   R+ EG+P P   S AK+++++ +    Q G  LS++   GP+TT D+LEY+PL D++  I+  QPDV ++CGPFVD   P V  GE  I      ++ V +E+LF+ + +  LE +Y  +P + ++ VLVPS  D+     +  PPL ++ +  GV    F +E  G+LGL +         +     KR++C+SNP    +NE++VGVT++D+L H+S DE + N  PG RL R+A HL+QQ+S++PLF  PA   A LDL  +D   MP+ PD+L++PSKLT F + V    + +NPG LTK   GGTYA++ +HP+  E LE+   + E++H V  R   +I RI
Sbjct:   23 APLVTKLTGLSTSLRLTPRQLAEAWEAHSLTRNVD-----VLDDVTFGGYQSALAKEAESKGLIASSSVDSKRNVVVMQSSGLGKRTAPHSSVTPS---PMAKRGAQTPQSASGATAPADRSGLSAVDNLTTPSGKVPISPGMKHPGVASANQITPTAKSAPKYQDRTGTGSLVTSYNPNSLPTAVE-VNAQNADNATTQKTCTIQYHPSSTHPQPPTKSTPFRHMFTPLATRAKALESRILTMSDSICEKYNIKSEEEEMLKYEHVSAEVVDDNMACWTPVGIPKQGKVVCVGRICNEAHEGRLNRASIRLEGSRKDSSGSRIHLDLNSLVTNNDNNQSYSFFPGQIVAVEGINSSGRTMQASRLYEGVPPPVEKSTAKELIKYNYGPDGQNGMPLSIVSMCGPFTTKDNLEYDPLVDMVMKISEDQPDVVIMCGPFVDGRQPLVQGGEPTITDEDGNEKKVSYENLFQTKFAALLEEMYANDPDMKTQFVLVPSTEDMICESVYPQPPLVNQEVTSGVKK--FNDE-FGNLGLNYVEIAGRENIKTSERTKRVHCVSNPCTLKINELSVGVTSSDVLFHISSDETNANLPPGGRLTRIAQHLIQQRSYYPLF--PAAKGACLDLSRSDEWEMPVQPDILIVPSKLTTFARKVLDTTVVVNPGELTKNTTGGTYAVIDVHPMKKEALEK-GGDAEMEHGVQDRVRVDIKRI 719          
BLAST of EWM28950.1 vs. NCBI_GenBank
Match: gi|1210519807|dbj|GAX21359.1| (DNA polymerase alpha subunit B [Fistulifera solaris])

HSP 1 Score: 337.806 bits (865), Expect = 5.495e-103
Identity = 237/697 (34.00%), Postives = 365/697 (52.37%), Query Frame = 0
Query:    6 SAVKEGEVLNAFQEINEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGGATVTPAASTRRSGRAS------FDPSTLPS-TEQAMRKRLSLSEDPASAEKWPGAGAFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTP--SAAASTPAPMLTPGGLSSTSSPPLSAGGATAYLNRTNAGQKAGTLPGALDINLPSRYRFMYTTLEERARAQEKMLLRLQDDLVAR-GLEAEAEVTP---VGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPA-FSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDV----FHDHPPLADRIPGGV-PS-PWFEEERLGDLGLPFA-SEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSYN--PGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDV-GGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEVQHEVARRTHAEIVRI 678
            + +++ E+ NAF ++   +  +A  + KC +    L LS + +A  WEA+++ + +       LN  S       L K                  + + S        P +LP  T  A R +L+   +  + E      + LSP P   PV  +P         +    ++FT      A+   P+L        S P  +    ++  +  N              NL   YR ++TT E+RA A ++ L+ +   L+ +  L    EV P   VG+P+ + V  IGR+C  A  G+IN  SVLLEGSR   GG RV ++L  L + +S+FPGQ+VA+EG+N +G K+ V+R+ EG     +TS  + + ++   +  Q G  + LL AAGP+TT+D+ +Y+P +DLL V+   QPDV +L GPFVD NHP V SG+T +         V +E+ F  ++SL LE L   NP L ++ VLVPSL D      +  PP  DR+ GG+ P+ P  +   +G +GL +  +  +   KR++C+ NP    +NEV +G+T+ D+L H+S DE + N  PG+RLAR++ HLLQQ+S++PLF PPA G   +D ++ ++  MP  PD+LLLPSKL  F + V    + +NPG LT+   GGTYA++ +HP   + LE    + E+ H +  RT   I RI
Sbjct:    2 TTMQQFELKNAFSKVGLKVIDEA-TMSKCTAAATMLRLSPQQVATCWEAYSLKKNT-----TTLNEQSFEGFRDLLVKESNTVNNNIPMSDEHNNNNNKESPRGGAVLPPRSLPHVTPPAKRLQLAAVTNNTNTEPSSRRSSSLSPGP---PVALQPSDKYETRIGAGQIVSTFTAEHKRTATNDNPLL--------SRPKCTIRSESSAFSTNNN-------------NLSQAYRSLFTTTEQRATALDQQLIHMGQHLMEKYQLGQSDEVAPLEGVGIPRADQVCNIGRICNAAHYGKINATSVLLEGSRAAVGGARVAVDLSTLSSQYSVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTSRVRDLRQYHLQA--QQGQPVKLLTAAGPFTTSDNFQYQPWQDLLHVVQNEQPDVVILTGPFVDMNHPAVQSGQTALQDEDGNDVIVPYETFFMHKISLLLEELLTENPLLMTQFVLVPSLEDATAEWVYPQPPFQDRVSGGLQPNIPGADGITIGTMGLDYVETATELPAKRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLF-PPAPGM-NMDYQYMEYWSMPCQPDLLLLPSKLACFSRIVMDTTIVVNPGRLTRDTMGGTYAIIEVHPFAKDVLETADDDDELPHALPERTEVIIKRI 664          
BLAST of EWM28950.1 vs. NCBI_GenBank
Match: gi|1210515175|dbj|GAX25887.1| (DNA polymerase alpha subunit B [Fistulifera solaris])

HSP 1 Score: 336.265 bits (861), Expect = 1.118e-102
Identity = 234/683 (34.26%), Postives = 353/683 (51.68%), Query Frame = 0
Query:   12 EVLNAFQEINEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGGATVTPAASTRRSGR-ASFDPSTLPS-TEQAMRKRLSLSEDPASAEKWPGAGAFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTPSAAASTPAPMLTPGGLSSTSSPPLSAGGATAYLNRTNAGQKAGTLPGALDINLPSRYRFMYTTLEERARAQEKMLLRLQDDLVAR-GLEAEAEVTP---VGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDV----FHDHPPLADRIPGGVPS--PWFEEERLGDLGLPFA-SEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSYN--PGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDV-GGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEVQHEVARRTHAEIVRI 678
            E+ NAF ++      +A  + KC +    L L+ + +A  WEA+++ + +       LN  S       L K           P + T  S R A   P +LP  T  A R +L+++ +P  +      G  +S  PS     R      GAG +    +A        +T  P+  P                           K      +   NL   YR M+TT E+RA A  + LL +   L+ +  L    +V P   VG+P+ + V  +GR+C  A  G+IN  S LLEGSR + GG RV L+   +  +S+FPGQ+VA+EG+N +G K+ V+R+ EG     +T+    + ++   +  Q G  L L+ AAGP+TT+D+  Y+PL+DLL V+   QPDV +L GPFVD +HP V SG+T +         V +E+ F  ++SL LE L   +P L ++ VLVPSL D      +  PP  DR+PGG+    P  +   +G +GL +  +  +   +R++C+ NP    +NEV +G+T+ D+L H+S DE + N  PG+RLAR++ HLLQQ+S++PLF PPA G   +D ++ +   MP  PDVL+LPSKL  F + V    + +NPG LT+   GGTYA++ +HP   + LE    + E+ H +  RT  EI RI
Sbjct:    7 ELKNAFSKVGLKTIDEA-TMSKCTAAATMLRLTPQQVATCWEAYSLKKNT-----TTLNEQSFEGFRDLLVKESNTLD----IPMSETNDSPRGAVLPPRSLPHVTPPAKRLQLAVATEPRRSSSSLSPGPPVSLQPSDKYETR-----TGAGQIVSTFSAK---EKRTATYVPLSRP---------------------------KCAIRKDSFSTNLSHTYRSMFTTTEQRATALNQQLLEMTKHLIDKYQLGQSDQVAPLEGVGIPRADQVCNVGRICNAAHAGKINATSCLLEGSRAE-GGVRVSLDWSGVSQYSVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTTRRSALRQYHLQA--QEGQPLKLVTAAGPFTTSDNFHYQPLQDLLHVVQQEQPDVVILTGPFVDLDHPAVQSGQTILQDEEGNDVIVPYETFFVHKISLLLEELLTEHPMLMTQFVLVPSLEDATAEWVYPQPPFQDRVPGGLQPNIPGADGITIGTMGLDYVETATELPCQRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLF-PPAPG-MNMDYQYMEQWSMPCQPDVLILPSKLACFSRTVMDTTIVVNPGRLTRDTVGGTYAIMEVHPFSKDVLEAADDDAELPHALPERTEVEIKRI 639          
BLAST of EWM28950.1 vs. NCBI_GenBank
Match: gi|754343849|ref|XP_004364642.2| (hypothetical protein CAOG_01774 [Capsaspora owczarzaki ATCC 30864] >gi|765549843|gb|KJE90464.1| hypothetical protein CAOG_001774 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 303.138 bits (775), Expect = 3.973e-90
Identity = 236/713 (33.10%), Postives = 340/713 (47.69%), Query Frame = 0
Query:   12 EVLNAFQEINEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLE---------------ATLSKRGTGAGGATVTPAASTRRSGRASFDPSTLPSTEQAMRKRLSLSEDPASAEKWPGAGAFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTPSAAASTPAPMLTPGGLSSTSSPPLSAGGATAYLNRTNAGQKAGTL--------------PGALDINL-----PSRYRFMYTTLEERARAQEKMLLRLQDDLVARGL-EAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSL------YQGGGA-LSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHDHPPLADRIPGGVPSPWFEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSY----NPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEVQHEVARRTHAEIVRI 678
            E+++ F +I + L    ++V +CL+I +   +SA  LA +WEA A    + DSS+ L     L SL+               AT  +        TV+PA     S   +FD  T+   ++++     +S+  +S             +P+K P    PP+       SP                 +L+P  LS T + P     + A+  R+NAG+    L              P  +D+ +      + YRFM   + ++A   ++ +  L   +  + L  A A    VG+ KQ   TV GR+C +A  G++N  S+LLEGSR    G R+ L++  L  FS FPGQ+V  +G N +G K  V+      P  F TS  K M + +   L      Y+ G   LS++ AAGP++ TD L + PL +L   +   +PDV +L GPFVD  HP VA+GE ++           FE LF+  V+  +  L ++   L   IV+VPSL DV HD           +P P            PF  E     +RL   SNP  F +NEV +G+ T+DIL HLS +E +     +  +RLARLA HLL Q+SF+PLFPP      +  L H   L +P+TPDVL+LPS L  F K V   +C+NPG LT+   GGTYA L + P   E +   +    V H VARRT AEIVRI
Sbjct:    6 EIISEFADIGQKLSD--DLVAQCLTICNRFDVSAETLAAKWEAFA---SASDSSRRL-GADDLASLQKQLQDQERQQQNQRSATKKRPANAPIPTTVSPAKVDLAS--TTFDKRTVHIVDESILSLYGMSDQMSSRSS--------KDTPNKRPFGTPPPNRVSDTIGSPL----------------LLSPTSLSPTRNLP-----SKAFSERSNAGKVEFILNEALPPWRRPANAGPRTIDMGMFESCQLTPYRFMLQKVTDKAEVLDQKIEELGALIRKQQLPNAPASFDHVGLAKQAMATVAGRICSDAGNGKLNDVSILLEGSRDVCNGVRIPLDMRSLDHFSAFPGQIVVAQGYNITGTKFSVQ------PHSFFTSAPKPMQQTETAQLLDYWAPYRSGNRPLSIVAAAGPFSGTDDLSFAPLMELATQVGNSEPDVLILMGPFVDEQHPGVAAGELDVT----------FEDLFREAVNDTVHKLLNSYSGL--HIVIVPSLRDVVHDK---------IMPQP------------PFPEELVQPHERLMLCSNPGTFVINEVTIGIITSDILFHLSSEETARARAGDTSDRLARLAGHLLDQRSFYPLFPPALGTNTE--LTHRKQLDLPVTPDVLILPSDLKFFAKIVQQTVCVNPGRLTRDKTGGTYAKLTVFPPREEDVP--AGMNTVLHHVARRTRAEIVRI 638          
BLAST of EWM28950.1 vs. NCBI_GenBank
Match: gi|673034594|ref|XP_008871258.1| (hypothetical protein H310_07624 [Aphanomyces invadans] >gi|574473229|gb|ETW00233.1| hypothetical protein H310_07624 [Aphanomyces invadans])

HSP 1 Score: 300.827 bits (769), Expect = 1.194e-89
Identity = 230/689 (33.38%), Postives = 334/689 (48.48%), Query Frame = 0
Query:   21 NEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGGATVTPAASTRRSGRASFDPSTLPSTEQAMRKRLSLSEDPASAEKWPGAGAFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTPSAAASTPAPMLTPGGLSSTSSPPLSAGGATAYLNRTNAGQKAGTLPGALDINL-PSRYR--------------------FMYTTLEERARAQEKMLLRLQDDLVAR-GLEAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGV-NSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQ--VASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHDHPPLADRIPGGVPSPWFEEERLGDLGLPFASEKDGAD--KRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSYN----PGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEVQHEVARRTHAEIVRI 678
            N  L  K + V  C+ +     LSA  LA +W+  AMN     +S  +  + SLG   A L  +            A+ R   R          T++ ++ +  + ++P ++           P+    P KR+             A+ASF    A      + +P   SS  SPP +      Y +RTNAG+   +   +L   + P+ YR                    FMYT++ +RA A + +L+  Q  + A+ G+E  A    VG P    VTV GR+ CEAPEG++N + + LEG+R+  GG RV L+L Q+PA   FPG++VAVEG+ N +   M V+R IE  P P        M+E    S+      + +  AAGP+T  +  +Y+PL DL+KV A ++PDV +L GPF+DANH +  + S +  +         V F+ +F  ++      L    P     +VL+PS+ DV H         P   P P F+ +++ + GL      D  D  KR++ LSNP+ FT+N    G TT+DIL  L G E   +       RL RL   LL+Q SFFPLF  P+ G   LDL++ D  ++P+ PDVLLLPS L  F   V   LC+NPG L+KG  GGTYA + I P    +    SPE    H+VA+RT  E+ RI
Sbjct:   15 NNSLDIKEDAVATCIDLCKEFALSAESLAEQWDVFAMN-----ASIKVATVDSLGKFRAMLFDQ------------ANKRSIKR---------ETKETLKSKPMVKKEPIAS-----VYGIQLPTVHDTPKKRQ-------------ASASFQSPDAKILRTSVFSP---SSFQSPPTA-----EYASRTNAGEVVDSFNTSLKSQIEPAEYRSDSVEVERLHGDKQMSPSANFMYTSMSDRAIALDTLLVDFQTRMEAQLGIEFGA----VGDPSPSQVTVCGRIVCEAPEGKLNASVIQLEGARKHCGGQRVLLDLSQVPALEAFPGKLVAVEGIYNDTRNPMQVKRFIE--PEPL------AMVE----SIANDSAPIRVFTAAGPFTANNDPQYQPLSDLIKVAAKQRPDVVILMGPFIDANHAKDGIVSYDNVL---------VSFDDIFLFQIITKFNTLLAELPN--CHLVLIPSVRDVQH---------PYVYPQPPFDRKKVFE-GL------DSPDFQKRVHLLSNPTTFTINGTVFGATTSDILLELGGAEFHRSQQAAQQQRLFRLTEQLLRQNSFFPLF--PSTGDTPLDLKYIDQYQLPVRPDVLLLPSVLNRFCGAVQDTLCVNPGQLSKGQAGGTYAEITILP----KGHHESPEP---HQVAQRTLVEVKRI 599          
BLAST of EWM28950.1 vs. NCBI_GenBank
Match: gi|675166695|ref|XP_008892232.1| (hypothetical protein PPTG_02746 [Phytophthora parasitica INRA-310] >gi|568108404|gb|ETN23028.1| hypothetical protein PPTG_02746 [Phytophthora parasitica INRA-310])

HSP 1 Score: 301.597 bits (771), Expect = 1.236e-89
Identity = 223/679 (32.84%), Postives = 342/679 (50.37%), Query Frame = 0
Query:   16 AFQEINEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGGATVTPAASTRRSGRASFDPSTLPSTEQAMRKRLSLSEDPAS---AEKWP---GAGAFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTPSAAASTPAPMLTPGGLSSTSSPPLSAGGATAYLNRTNAGQKAGT-LPGALDINLPSRY-----RFMYTTLEERARAQEKMLLRLQDDLVARGLEAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVN-SSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHDHPPLADRIPGGVPSPWFEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEV---SYNPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEVQHEVARRTHAEIVRI 678
            AF   N DL   A     C+SI    GLS+ D+A +W+A++MN+    ++    N   L +  + L ++        V  +AS +R  R S  P           KR + S+D      + K P    A +F SP+ S   V+R+       G  SPP+  S   S+         T  G S T           A+L +   G  A T  P  +    PSR       +MYT L +RA A ++ L+  + +LV    + E E+ PVG P    VTV+GR+ CEA EG++N + V +EGSR+  GG RV L+L  +P F +FPG++VA++GV   +   + V+R +E IP P  TS   ++ E Q +     G  + +L A GP+TTT +++Y PL DLL++   ++PDV +L GPF+D+ H     G  +  G       + FE +F  +V   L  +   +  +  ++V+VPSL D  H++           P P   +++  +     A E     KR++ +SNPS F++N V  G +  D++  LS +E+        NRL RL   ++ Q+SF+P+FPPP + +A +DLR+    +   TPD+LLLPS L  F   V  ++C+NPG L KG  GGT+A + I PL  +++E  + + +  H V  RT  EI RI
Sbjct:   11 AFAACNLDLEDDA--ASTCVSICTEFGLSSDDMAAQWDAYSMNQQLSGAA----NSDGLVAFRSHLKQQQQVKAQEAVPTSASQKR--RHSKTPVV---------KREADSQDKLESLYSMKSPEGKHARSFSSPAGSNK-VQRK------EGMFSPPSMQSPPGSSYEKR-----TDAGKSMTD--------FNAHLRKQIEGMGANTGKPVEVKAPFPSRNLTPNSSYMYTPLFQRAIALDEQLVEYE-ELVKEKFKLE-EIKPVGDPSPAQVTVVGRIVCEAAEGKLNPSVVQVEGSRKTCGGQRVLLDLSAVPNFQIFPGKIVALKGVFPDTRSPLAVKRFLEPIPAPPATSSPARIKEIQSEH----GNPVRVLTACGPFTTTSNVDYLPLNDLLQIAIDQKPDVLILVGPFIDSMHSMFQDGLVKYDGM-----MLSFEEIFLFKVMTLLNNVLSRDERI--QVVIVPSLRDANHEY---------VYPQPPLNKKKACE-----AFEVADYAKRVHFMSNPSTFSINGVVFGTSALDVVVQLSSNELYRAQVRDQNRLLRLCEQVVDQRSFYPMFPPPPNSEAPIDLRYMKQFQFEQTPDILLLPSILNRFCGRVKDSICLNPGQLCKGESGGTFAHITILPLSNDKIESAT-DDKCAHFVPDRTIVEIKRI 624          
BLAST of EWM28950.1 vs. NCBI_GenBank
Match: gi|570988899|gb|ETP47194.1| (hypothetical protein F442_06689 [Phytophthora parasitica P10297])

HSP 1 Score: 300.442 bits (768), Expect = 3.026e-89
Identity = 220/679 (32.40%), Postives = 342/679 (50.37%), Query Frame = 0
Query:   16 AFQEINEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGGATVTPAASTRRSGRASFDPSTLPSTEQAMRKRLSLSEDPAS---AEKWP---GAGAFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTPSAAASTPAPMLTPGGLSSTSSPPLSAGGATAYLNRTNAGQKAGT-LPGALDINLPSRY-----RFMYTTLEERARAQEKMLLRLQDDLVARGLEAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVN-SSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHDHPPLADRIPGGVPSPWFEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEV---SYNPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMSPETEVQHEVARRTHAEIVRI 678
            AF   N DL   A     C+SI    GLS+ D+A +W+A++MN+    ++ +   ++    L+    ++   A  A  T A+  RR  +              + KR + S+D      + K P    A +F SP+ S   V+R+       G  SPP+  S   S+         T  G S T           A+L +   G  A T  P  +    PSR       +MYT L +RA A ++ L+  + +LV    + E E+ PVG P    VTV+GR+ CEA EG++N + V +EGSR+  GG RV L+L  +P F +FPG++VA++GV   +   + V+R +E IP P  TS   ++ E Q +     G  + +L A GP+TTT +++Y PL DLL++   ++PDV +L GPF+D+ H     G  +  G       + FE +F  +V   L  +   +  +  ++V+VPSL D  H++           P P   +++  +     A E     KR++ +SNPS F++N V  G +  D++  LS +E+        NRL RL   ++ Q+SF+P+FPPP + +A +DLR+    +   TPD+LLLPS L  F   V  ++C+NPG L KG  GGT+A + I PL  +++E  + + +  H V  RT  EI RI
Sbjct:   11 AFAACNLDLEDDA--ASTCVSICTEFGLSSDDMAAQWDAYSMNQQLSGAANSDGLVAFRSHLKQQQQQQQVKAQEAVPTSASQKRRHSKT------------PVVKREADSQDKLESLYSMKSPEGKHARSFSSPAGSNK-VQRK------EGMFSPPSMQSPPGSSYEKR-----TDAGKSMTD--------FNAHLRKQIEGMGANTGKPVEVKAPFPSRNLTPNSSYMYTPLFQRAIALDEQLVEYE-ELVKEKFKLE-EIKPVGDPSPAQVTVVGRIVCEAAEGKLNPSVVQVEGSRKTCGGQRVLLDLSAVPNFQIFPGKIVALKGVFPDTRSPLAVKRFLEPIPAPPATSSPARIKEIQSEH----GNPVRVLTACGPFTTTSNVDYLPLNDLLQIAIDQKPDVLILVGPFIDSMHSMFQDGLVKYDGM-----MLSFEEIFLFKVMTLLNNVLSRDERI--QVVIVPSLRDANHEY---------VYPQPPLNKKKACE-----AFEVADYAKRVHFMSNPSTFSINGVVFGTSALDVVVQLSSNELYRAQVRDQNRLLRLCEQVVDQRSFYPMFPPPPNSEAPIDLRYMKQFQFEQTPDILLLPSILNRFCGRVKDSICLNPGQLCKGESGGTFAHITILPLSNDKIESAT-DDKCAHFVPDRTIVEIKRI 627          
The following BLAST results are available for this feature:
BLAST of EWM28950.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111424|gb|EWM28950.1|0.000e+0100.00hypothetical protein Naga_100389g2 [Nannochloropsi... [more]
gi|299117538|emb|CBN75382.1|6.542e-16443.77conserved unknown protein [Ectocarpus siliculosus][more]
gi|553192434|ref|XP_005855569.1|1.969e-12198.32DNA polymerase alpha subunit B, partial [Nannochlo... [more]
gi|223998634|ref|XP_002288990.1|6.256e-12035.96predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1210519807|dbj|GAX21359.1|5.495e-10334.00DNA polymerase alpha subunit B [Fistulifera solari... [more]
gi|1210515175|dbj|GAX25887.1|1.118e-10234.26DNA polymerase alpha subunit B [Fistulifera solari... [more]
gi|754343849|ref|XP_004364642.2|3.973e-9033.10hypothetical protein CAOG_01774 [Capsaspora owczar... [more]
gi|673034594|ref|XP_008871258.1|1.194e-8933.38hypothetical protein H310_07624 [Aphanomyces invad... [more]
gi|675166695|ref|XP_008892232.1|1.236e-8932.84hypothetical protein PPTG_02746 [Phytophthora para... [more]
gi|570988899|gb|ETP47194.1|3.026e-8932.40hypothetical protein F442_06689 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1728rna1728Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications