EWM28957.1, cds1716 (CDS) Nannochloropsis gaditana

Overview
NameEWM28957.1
Unique Namecds1716
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1335644..1335646 -
Alignment locationCM002457.1:1335464..1335533 -
Alignment locationCM002457.1:1335201..1335283 -
Alignment locationCM002457.1:1334893..1335003 -
Alignment locationCM002457.1:1334620..1334724 -
Alignment locationCM002457.1:1334371..1334442 -
Alignment locationCM002457.1:1333904..1333984 -
Alignment locationCM002457.1:1333534..1333725 -
Alignment locationCM002457.1:1333246..1333374 -
Alignment locationCM002457.1:1333011..1333115 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28957.1
Productribosomal protein l5
Orig transcript idgnl|cribi|Naga_100308g2.5017.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1335644..1335646 -
CM002457.1supercontigCM002457.1:1335464..1335533 -
CM002457.1supercontigCM002457.1:1335201..1335283 -
CM002457.1supercontigCM002457.1:1334893..1335003 -
CM002457.1supercontigCM002457.1:1334620..1334724 -
CM002457.1supercontigCM002457.1:1334371..1334442 -
CM002457.1supercontigCM002457.1:1333904..1333984 -
CM002457.1supercontigCM002457.1:1333534..1333725 -
CM002457.1supercontigCM002457.1:1333246..1333374 -
CM002457.1supercontigCM002457.1:1333011..1333115 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0003723RNA binding
GO:00080975S rRNA binding
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR005484Ribosomal_L18/L5
IPR025607Rbsml_L5e/L18P_C
IPR005485Rbsml_L5_euk/L18_arc
Homology
BLAST of EWM28957.1 vs. NCBI_GenBank
Match: gi|553185196|ref|XP_005854216.1| (large subunit ribosomal protein L5e [Nannochloropsis gaditana CCMP526] >gi|422294841|gb|EKU22141.1| large subunit ribosomal protein L5e [Nannochloropsis gaditana CCMP526] >gi|585111436|gb|EWM28957.1| ribosomal protein l5 [Nannochloropsis gaditana])

HSP 1 Score: 646.351 bits (1666), Expect = 0.000e+0
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVDEPDGEIATTKDETNGRTYYVPELNDEKKPFRAILDVGIQTTTTGNRIFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVADYINYLVEEDHEAYERQFANYIKHGVSGDDYQDLLEEVHTAIREDPTAAPKTEWEGDRTKYKRQGKLSYEERKSRVAEKKLAMAAAAGDADEMEEEEEEE 316
            MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVDEPDGEIATTKDETNGRTYYVPELNDEKKPFRAILDVGIQTTTTGNRIFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVADYINYLVEEDHEAYERQFANYIKHGVSGDDYQDLLEEVHTAIREDPTAAPKTEWEGDRTKYKRQGKLSYEERKSRVAEKKLAMAAAAGDADEMEEEEEEE
Sbjct:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVDEPDGEIATTKDETNGRTYYVPELNDEKKPFRAILDVGIQTTTTGNRIFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVADYINYLVEEDHEAYERQFANYIKHGVSGDDYQDLLEEVHTAIREDPTAAPKTEWEGDRTKYKRQGKLSYEERKSRVAEKKLAMAAAAGDADEMEEEEEEE 316          
BLAST of EWM28957.1 vs. NCBI_GenBank
Match: gi|1173949277|gb|OQR97335.1| (60S ribosomal protein L5 [Achlya hypogyna])

HSP 1 Score: 404.06 bits (1037), Expect = 5.130e-139
Identity = 197/300 (65.67%), Postives = 237/300 (79.00%), Query Frame = 0
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVDEPDGEIATTKDETNGRTYYVPELNDEKKPFRAILDVGIQTTTTGNRIFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVADYINYLVEEDHEAYERQFANYIKHGVSGDDYQDLLEEVHTAIREDPTAAPKTEWEGDRTKYKRQGKLSYEERKSRVAEKKLAMA 300
            M FVKV K+K YFKRYQTK+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA IDGDK+LA+A S EL RYGLK G KNY AAYCTGLL+ RRLLNKLGLD  YEG  E DGE+  T  E+NGRTYYV E+ DEK+PFRA LDVG+++T+TGNR+FG LKGA+D GLDIP SEKRFPGYDRD K YDA+ HKERI GEH+++++  L E+D E Y++ FA+YIK G++ DD +DL   VH AIREDPT A K  ++ D  K+K+Q K S ++ K+RVA+KK   A
Sbjct:    1 MAFVKVNKSKAYFKRYQTKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKRVICQIAYAEIDGDKILASAYSDELKRYGLKAGFKNYPAAYCTGLLVGRRLLNKLGLDGEYEGNTEIDGEVVKT--ESNGRTYYVAEVADEKRPFRAFLDVGLRSTSTGNRVFGALKGATDAGLDIPHSEKRFPGYDRDAKSYDAEVHKERIFGEHISNHMKELEEDDPEMYQKHFADYIKAGITSDDMEDLYTSVHEAIREDPTPAAKKPFKAD-PKFKKQAKRSLQQFKARVAQKKAHAA 297          
BLAST of EWM28957.1 vs. NCBI_GenBank
Match: gi|698794322|ref|XP_009830190.1| (hypothetical protein H257_06606 [Aphanomyces astaci] >gi|574114779|gb|ETV80266.1| hypothetical protein H257_06606 [Aphanomyces astaci])

HSP 1 Score: 402.519 bits (1033), Expect = 2.580e-138
Identity = 198/303 (65.35%), Postives = 233/303 (76.90%), Query Frame = 0
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVDEPDGEIATTKDETNGRTYYVPELNDEKKPFRAILDVGIQTTTTGNRIFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVADYINYLVEEDHEAYERQFANYIKHGVSGDDYQDLLEEVHTAIREDPTAAPKTEWEGDRTKYKRQGKLSYEERKSRVAEKKLAMAAAA 303
            MPFVKV KNK YFKRYQ K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  IAQI YA IDGDK+L +A S EL RYGLK G KNYAAAY TGLL+ RRLLNKLGLD  YEG  E DG +  T  E NGRTYYV E+ DEK+PFRA LDVG++TT+TGNR+FG LKGA+D GLDIP SEKRFPGYDRD K YDAD HKERI GEH+A+++  L E+D E +++ FA+YIK G+  DD +++   VH AIREDPT APK  +  D  K+K   K S ++RK+RV +KK   A  A
Sbjct:    1 MPFVKVSKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKRVIAQIAYAEIDGDKILTSAYSDELKRYGLKAGFKNYAAAYATGLLVGRRLLNKLGLDGDYEGNTEVDGTVVKT--EANGRTYYVAEVADEKRPFRAFLDVGLRTTSTGNRVFGALKGATDAGLDIPHSEKRFPGYDRDAKSYDADVHKERIFGEHIANHMKELEEDDPEMFQKHFAHYIKAGLGSDDIEEMYTAVHEAIREDPTPAPKKAYTPD-LKFKNTAKRSLQQRKARVVQKKAHHAKLA 300          
BLAST of EWM28957.1 vs. NCBI_GenBank
Match: gi|813171660|ref|XP_012204585.1| (hypothetical protein SPRG_10239 [Saprolegnia parasitica CBS 223.65] >gi|641530588|gb|KDO24705.1| hypothetical protein SPRG_10239 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 402.134 bits (1032), Expect = 3.518e-138
Identity = 197/300 (65.67%), Postives = 235/300 (78.33%), Query Frame = 0
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVDEPDGEIATTKDETNGRTYYVPELNDEKKPFRAILDVGIQTTTTGNRIFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVADYINYLVEEDHEAYERQFANYIKHGVSGDDYQDLLEEVHTAIREDPTAAPKTEWEGDRTKYKRQGKLSYEERKSRVAEKKLAMA 300
            M FVKV K+K YFKRYQTK+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA IDGDK+LA+A S EL RYGLK G KNY AAYCTGLL+ RRLLNKLGLD  YEG  E DGE+  T  E NGRTYYV E+ DEK+PFRA LDVG+++T+TGNR+FG LKGA+D GLDIP SEKRFPGYDRD K YDA+ HKERI G+H+++++  L E+D E Y++ FA+YIK G++ DD +DL   VH AIREDPT A K  ++ D  KYK+Q K S  + K+RVA+KK   A
Sbjct:    1 MAFVKVNKSKAYFKRYQTKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKRVICQIAYAEIDGDKILASAYSDELKRYGLKCGFKNYPAAYCTGLLVGRRLLNKLGLDGDYEGNTEVDGEVVKT--EANGRTYYVAEVADEKRPFRAFLDVGLRSTSTGNRVFGALKGATDAGLDIPHSEKRFPGYDRDAKSYDAEVHKERIFGDHISNHMKELEEDDPEMYQKHFADYIKAGITSDDMEDLYASVHEAIREDPTPAEKKPFKAD-PKYKKQAKRSLSQFKARVAQKKAHAA 297          
BLAST of EWM28957.1 vs. NCBI_GenBank
Match: gi|673014100|ref|XP_008861011.1| (hypothetical protein H310_00139 [Aphanomyces invadans] >gi|574482609|gb|ETW09600.1| hypothetical protein H310_00139 [Aphanomyces invadans])

HSP 1 Score: 401.749 bits (1031), Expect = 5.254e-138
Identity = 198/303 (65.35%), Postives = 234/303 (77.23%), Query Frame = 0
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVDEPDGEIATTKDETNGRTYYVPELNDEKKPFRAILDVGIQTTTTGNRIFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVADYINYLVEEDHEAYERQFANYIKHGVSGDDYQDLLEEVHTAIREDPTAAPKTEWEGDRTKYKRQGKLSYEERKSRVAEKKLAMAAAA 303
            MPFVKV KNK YFKRYQ K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA IDGDK+L +A S EL RYGLK G KNYAAAY TGLL+ RRLLNKLGLD  YEG  E DG +  T  E NGRTYYV E+ DEK+PFRA LDVG++TT+TGNR+FG LKGA+D GLDIP SEKRFPGYDRD K YDAD HKERI GEH+A+++  L E+D E +++ FA+Y+K G+  DD +++   VH AIR DPTAAPK  +  D  KYK + K S ++RK+RVA+KK   A  A
Sbjct:    1 MPFVKVSKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKRIITQIAYAEIDGDKILCSAYSDELKRYGLKAGFKNYAAAYATGLLVGRRLLNKLGLDGDYEGNTEIDGTVVKT--EANGRTYYVAEVADEKRPFRAFLDVGLRTTSTGNRVFGALKGATDAGLDIPHSEKRFPGYDRDAKSYDADVHKERIFGEHIANHMKELEEDDPEMFQKHFAHYVKAGLGPDDIEEMYTAVHEAIRADPTAAPKKAFTPD-LKYKNKAKRSLQQRKARVAQKKAHHAKLA 300          
BLAST of EWM28957.1 vs. NCBI_GenBank
Match: gi|1210526844|dbj|GAX14492.1| (large subunit ribosomal protein L5e [Fistulifera solaris])

HSP 1 Score: 394.43 bits (1012), Expect = 4.819e-135
Identity = 192/301 (63.79%), Postives = 236/301 (78.41%), Query Frame = 0
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVDEPDGEIATTKDETNGRTYYVPELNDEKKPFRAILDVGIQTTTTGNRIFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVADYINYLVEEDHEAYERQFANYIKHGVSGDDYQDLLEEVHTAIREDPTAAPKTEWEGDRTKYKRQGKLSYEERKSRVAEKKLAMAA 301
            MPFV+  K K YF RYQ KFRRRREGKTDYR RKR+V QDKNKY +PKYRLVVRFTN+  I QIVY+ IDGD+VLA A SKELARYGL VGLKNYAAAYCTGLL+ARR+L KLGLD+ YEG  E DG+I +T  E + + YYV E++D+KKPFR  LDVG +TT+TG RIFG LKGA+DGGLDIP SEKRFPGYDRD K YDAD H+ERI G HV++Y+ YL EED+  Y+  F +++++ ++GD  ++L E VH  IREDP+ + K E+  D++ YKR+ KL+++ERK+RV  KK A  A
Sbjct:    1 MPFVQATKTKAYFSRYQVKFRRRREGKTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNQQVICQIVYSLIDGDRVLAQATSKELARYGLSVGLKNYAAAYCTGLLVARRVLQKLGLDDVYEGNTEVDGQIVST--EYDNKKYYVDEVDDDKKPFRCFLDVGCRTTSTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDTKEYDADMHRERIFGGHVSEYMEYLEEEDNAKYQSHFKSFLENDIAGDGLEELYEGVHEKIREDPSPSEKKEFTPDKS-YKRKSKLTHDERKARVQAKKDAKKA 298          
BLAST of EWM28957.1 vs. NCBI_GenBank
Match: gi|1210531608|dbj|GAX09964.1| (large subunit ribosomal protein L5e [Fistulifera solaris])

HSP 1 Score: 392.889 bits (1008), Expect = 1.771e-134
Identity = 191/301 (63.46%), Postives = 236/301 (78.41%), Query Frame = 0
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVDEPDGEIATTKDETNGRTYYVPELNDEKKPFRAILDVGIQTTTTGNRIFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVADYINYLVEEDHEAYERQFANYIKHGVSGDDYQDLLEEVHTAIREDPTAAPKTEWEGDRTKYKRQGKLSYEERKSRVAEKKLAMAA 301
            MPFV+  K K YF RYQ KFRRRREGKTDYR RKR+V QDKNKY +PKYRLVVRFTN+  I QIVY+ IDGD+VLA A SKELARYGL VGLKNYAAAYCTGLL+ARR+L KLGLD+ YEG  E DG+I +T  + + + YYV E++D+KKPFR  LDVG +TT+TG RIFG LKGA+DGGLDIP SEKRFPGYDRD K YDAD H+ERI G HV++Y+ YL EED+  Y+  F +++++ ++GD  ++L E VH  IREDP+ + K E+  D++ YKR+ KL+++ERK+RV  KK A  A
Sbjct:    1 MPFVQATKTKAYFSRYQVKFRRRREGKTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNQQVICQIVYSLIDGDRVLAQATSKELARYGLSVGLKNYAAAYCTGLLVARRVLQKLGLDDVYEGNTEVDGQIVST--DYDNKKYYVDEVDDDKKPFRCFLDVGCRTTSTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDTKEYDADMHRERIFGGHVSEYMEYLEEEDNAKYQSHFKSFLENDIAGDGLEELYEGVHEKIREDPSPSEKKEFTPDKS-YKRKSKLTHDERKARVQAKKDAKKA 298          
BLAST of EWM28957.1 vs. NCBI_GenBank
Match: gi|676379729|ref|XP_009033143.1| (hypothetical protein AURANDRAFT_52316 [Aureococcus anophagefferens] >gi|323456180|gb|EGB12047.1| hypothetical protein AURANDRAFT_52316 [Aureococcus anophagefferens])

HSP 1 Score: 391.734 bits (1005), Expect = 9.584e-134
Identity = 189/297 (63.64%), Postives = 236/297 (79.46%), Query Frame = 0
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVDEPDGEIATTKDETNGRTYYVPELNDEKKPFRAILDVGIQTTTTGNRIFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVADYINYLVEEDHEAYERQFANYIKHGVSGDDYQDLLEEVHTAIREDPTAAPKTEWE-GDRTKYKRQGKLSYEERKSRVAEKK 296
            MPFVK++KNK YFKRYQ K++RRREGKTDYRARKR++ QDKNKYNTPKYRLVVRF+N+Y    +  + + GDK +A A SKEL RYGLKVGLKN+AAAYCTGLL+ARRLL K+GLDE YEG  +P+GE+  T  E   + YYV EL+D+K+PF+ ILDVGIQTTTTGNR+FG LKGA+DGGLDIP + KRFPGYD++ K +DA++ K+RI G HV++Y+  L++ED+  Y++ FA+YIK GV  D  +DL   VH AIREDP+ A K E+E  DR  YK+  KL+YEERK+RVA KK
Sbjct:    1 MPFVKIIKNKAYFKRYQVKYKRRREGKTDYRARKRLITQDKNKYNTPKYRLVVRFSNKYVTCAVHSSELVGDKCIATATSKELGRYGLKVGLKNFAAAYCTGLLVARRLLAKVGLDELYEGNTDPEGEVVKT--EVGKKEYYVEELDDDKRPFKCILDVGIQTTTTGNRVFGALKGATDGGLDIPHNYKRFPGYDKESKEFDAEAMKDRIFGAHVSEYMEKLMDEDNAKYQQLFADYIKEGVEPDGMEDLYTSVHEAIREDPSPAEKEEFEVEDREAYKKTPKLTYEERKARVAAKK 295          
BLAST of EWM28957.1 vs. NCBI_GenBank
Match: gi|953487759|emb|CEG48587.1| (60s ribosomal protein l5 [Plasmopara halstedii])

HSP 1 Score: 389.808 bits (1000), Expect = 2.559e-133
Identity = 191/301 (63.46%), Postives = 231/301 (76.74%), Query Frame = 0
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVDEPDGEIATTKDETNGRTYYVPELNDEKKPFRAILDVGIQTTTTGNRIFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVADYINYLVEEDHEAYERQFANYIKHGVSGDDYQDLLEEVHTAIREDPTAAPKTEWEGDRTKYKRQGKLSYEERKSRVAEKKLAMAA 301
            MPFVKVLKNK YFKRYQ KFRRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA IDGDK+LA A S EL RYGL VGLKNYAAAY TGLL+ RR+L KLGLDE YEG  E DGEI  T  E+NGRTY+V E+ DEK+PFR  LD G+++TTTGNR+FG LKGA+D GLDIP SEKRFPGY RD K YDA+ H++RI   H++D++  L E+D E     +A Y+K G+  D+ +DL+ +VH AIR DP+ APK +   D+ KYKR  K S ++R++RVA+KK   A+
Sbjct:    1 MPFVKVLKNKAYFKRYQVKFRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKKIICQIAYAEIDGDKILAQATSAELPRYGLSVGLKNYAAAYATGLLVGRRVLAKLGLDEDYEGNTEVDGEIVKT--ESNGRTYFVDEVADEKRPFRCYLDCGLRSTTTGNRVFGALKGAADAGLDIPHSEKRFPGYSRDDKSYDAEVHRDRIFAVHISDHMKELEEDDPEMLASHYAEYVKAGIEPDNLEDLITKVHEAIRADPSPAPKKDHTFDK-KYKRAAKRSRQQRQARVAQKKAHAAS 298          
BLAST of EWM28957.1 vs. NCBI_GenBank
Match: gi|675206207|ref|XP_008911988.1| (hypothetical protein PPTG_15526 [Phytophthora parasitica INRA-310] >gi|568004853|gb|ETL79163.1| hypothetical protein L917_20133 [Phytophthora parasitica] >gi|568087906|gb|ETN02773.1| hypothetical protein PPTG_15526 [Phytophthora parasitica INRA-310] >gi|970648846|gb|KUF88272.1| hypothetical protein AM588_10004776 [Phytophthora nicotianae])

HSP 1 Score: 389.037 bits (998), Expect = 5.266e-133
Identity = 191/301 (63.46%), Postives = 231/301 (76.74%), Query Frame = 0
Query:    1 MPFVKVLKNKQYFKRYQTKFRRRREGKTDYRARKRMVAQDKNKYNTPKYRLVVRFTNRYCIAQIVYATIDGDKVLAAANSKELARYGLKVGLKNYAAAYCTGLLIARRLLNKLGLDEAYEGVDEPDGEIATTKDETNGRTYYVPELNDEKKPFRAILDVGIQTTTTGNRIFGVLKGASDGGLDIPQSEKRFPGYDRDGKRYDADSHKERIMGEHVADYINYLVEEDHEAYERQFANYIKHGVSGDDYQDLLEEVHTAIREDPTAAPKTEWEGDRTKYKRQGKLSYEERKSRVAEKKLAMAA 301
            MPFVKVLKNK YFKRYQ K+RRRREGKTDYRARKR++ QDKNKYN+PKYRLVVR TN+  I QI YA IDGDK+L  A+S EL RYGLKVGLKNYAAAY TGLL+ RR+L KLGLDE YEG  E DGEI  T  E+NGRTY+V E+ DEK+PFR  LD G++TTTTGNR+FG LKGA+D GLDIP SEKRFPGY RD K YDA+ H++RI   H+++++  L E+D E     +A Y+K G+  DD +DL+ +VH AIR DP+ A K E   D+ KYKR  K S ++R++RVA+KK   A+
Sbjct:    1 MPFVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLITQDKNKYNSPKYRLVVRITNKQVICQIAYAEIDGDKILCQASSAELPRYGLKVGLKNYAAAYATGLLVGRRVLQKLGLDEDYEGNTEVDGEIVKT--ESNGRTYFVEEVADEKRPFRCYLDCGLRTTTTGNRVFGALKGAADAGLDIPHSEKRFPGYSRDDKSYDAEVHRDRIFAIHISEHMKELEEDDPEMLASHYAEYVKAGIDPDDLEDLITKVHEAIRADPSPAAKKEHTFDK-KYKRAAKRSRQQRQARVAQKKAHAAS 298          
The following BLAST results are available for this feature:
BLAST of EWM28957.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553185196|ref|XP_005854216.1|0.000e+0100.00large subunit ribosomal protein L5e [Nannochlorops... [more]
gi|1173949277|gb|OQR97335.1|5.130e-13965.6760S ribosomal protein L5 [Achlya hypogyna][more]
gi|698794322|ref|XP_009830190.1|2.580e-13865.35hypothetical protein H257_06606 [Aphanomyces astac... [more]
gi|813171660|ref|XP_012204585.1|3.518e-13865.67hypothetical protein SPRG_10239 [Saprolegnia paras... [more]
gi|673014100|ref|XP_008861011.1|5.254e-13865.35hypothetical protein H310_00139 [Aphanomyces invad... [more]
gi|1210526844|dbj|GAX14492.1|4.819e-13563.79large subunit ribosomal protein L5e [Fistulifera s... [more]
gi|1210531608|dbj|GAX09964.1|1.771e-13463.46large subunit ribosomal protein L5e [Fistulifera s... [more]
gi|676379729|ref|XP_009033143.1|9.584e-13463.64hypothetical protein AURANDRAFT_52316 [Aureococcus... [more]
gi|953487759|emb|CEG48587.1|2.559e-13363.4660s ribosomal protein l5 [Plasmopara halstedii][more]
gi|675206207|ref|XP_008911988.1|5.266e-13363.46hypothetical protein PPTG_15526 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1720rna1720Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications