EWM28975.1, cds1700 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28975.1 vs. NCBI_GenBank
Match: gi|585111464|gb|EWM28975.1| (4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis [Nannochloropsis gaditana]) HSP 1 Score: 579.326 bits (1492), Expect = 0.000e+0 Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0 Query: 1 MCLSRSLFPCYFFPARSSSFPLRFSKTHMMTLSRLYFSTTAIAILCMYSIILPTSSAFLLRARPFPSPAATSTWSRCFLSSSSTPAAPKKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLVDYPGKGN 287 MCLSRSLFPCYFFPARSSSFPLRFSKTHMMTLSRLYFSTTAIAILCMYSIILPTSSAFLLRARPFPSPAATSTWSRCFLSSSSTPAAPKKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLVDYPGKGN Sbjct: 1 MCLSRSLFPCYFFPARSSSFPLRFSKTHMMTLSRLYFSTTAIAILCMYSIILPTSSAFLLRARPFPSPAATSTWSRCFLSSSSTPAAPKKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLVDYPGKGN 287
BLAST of EWM28975.1 vs. NCBI_GenBank
Match: gi|585111463|gb|EWM28974.1| (4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis [Nannochloropsis gaditana]) HSP 1 Score: 520.776 bits (1340), Expect = 0.000e+0 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0 Query: 29 MMTLSRLYFSTTAIAILCMYSIILPTSSAFLLRARPFPSPAATSTWSRCFLSSSSTPAAPKKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLVDYPGKGN 287 MMTLSRLYFSTTAIAILCMYSIILPTSSAFLLRARPFPSPAATSTWSRCFLSSSSTPAAPKKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLVDYPGKGN Sbjct: 1 MMTLSRLYFSTTAIAILCMYSIILPTSSAFLLRARPFPSPAATSTWSRCFLSSSSTPAAPKKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLVDYPGKGN 259
BLAST of EWM28975.1 vs. NCBI_GenBank
Match: gi|553194432|ref|XP_005855953.1| (dj-1 family protein [Nannochloropsis gaditana CCMP526] >gi|422293096|gb|EKU20396.1| dj-1 family protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 404.831 bits (1039), Expect = 3.348e-141 Identity = 200/202 (99.01%), Postives = 201/202 (99.50%), Query Frame = 0 Query: 86 AAPKKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLVDYPGKGN 287 +APKKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLP SWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLVDYPGKGN Sbjct: 3 SAPKKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPRSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLVDYPGKGN 204
BLAST of EWM28975.1 vs. NCBI_GenBank
Match: gi|1129182245|gb|OLP89380.1| (Protein DJ-1-like B [Symbiodinium microadriaticum]) HSP 1 Score: 200.675 bits (509), Expect = 5.630e-61 Identity = 106/193 (54.92%), Postives = 134/193 (69.43%), Query Frame = 0 Query: 90 KVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLVDY 282 KVLVPVADGSEEIE+ I D L R G VTVASVMP QV SRG+ +VAD I+DC G EWD IA PGG+PGAEHLRD AL LL+ Q ++ AA+CASPAVV THG L +++TC+P + V A ++D + V DGH++TS+GPGT+++FAL + ++LCG+ KA EVAKG+LVDY Sbjct: 3 KVLVPVADGSEEIETTCITDTLTRCGCQVTVASVMPG--------KLQVKMSRGINVVADCAIEDCKGTEWDAIALPGGMPGAEHLRDCAALTELLKDQSGKGKVTAAVCASPAVVFGTHGLLP-EKSTCYPKFKDVVG-AGWQDAQ--AVMDGHIITSQGPGTSIQFALKIGEKLCGKDKAVEVAKGMLVDY 183
BLAST of EWM28975.1 vs. NCBI_GenBank
Match: gi|1088337091|gb|OHB86084.1| (dihydroxyacetone kinase [Planctomycetes bacterium RIFCSPHIGHO2_02_FULL_40_12]) HSP 1 Score: 200.29 bits (508), Expect = 7.232e-61 Identity = 106/194 (54.64%), Postives = 131/194 (67.53%), Query Frame = 0 Query: 89 KKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLVDY 282 KKVLVPVADGSEEIE+ I+DVL RA A VTVASV +S Q+T SRG+KLVAD+ I +C+ +DLI PGG+PGAEHLRDS L+ +L+RQ RL AAICASPAVVLH HG L ++AT +P F E + VV DG+ +TSR PGT + FAL LV+ L G KA E+A+ +LVD+ Sbjct: 3 KKVLVPVADGSEEIETACIVDVLRRAEADVTVASV----------NSLQITASRGMKLVADQLISECVQNTYDLIVLPGGMPGAEHLRDSKELVEMLKRQQNDGRLYAAICASPAVVLHHHGLLAQRKATAYPG--FAEQFENTEAIDSRVVVDGNCITSRAPGTAMEFALKLVELLYGEQKAREIAQSMLVDW 184
BLAST of EWM28975.1 vs. NCBI_GenBank
Match: gi|931396254|gb|KPJ85360.1| (dihydroxyacetone kinase [Spirochaetes bacterium DG_61]) HSP 1 Score: 200.29 bits (508), Expect = 7.235e-61 Identity = 110/192 (57.29%), Postives = 132/192 (68.75%), Query Frame = 0 Query: 89 KKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLV 280 K+VL+P+ADGSEEIE+V IIDVL RAGA+VTVASV QV SRGVKL+AD I +C+ +DLIA PGG+PGAEH+RDS L +L++Q K RL AICASPAVVL HG L+GKRATC P F L E+ + VV DG+ VTSRGPGT + FAL LV+ L G KA EVAK ++V Sbjct: 3 KQVLIPIADGSEEIEAVCIIDVLRRAGASVTVASV----------DGLQVIASRGVKLIADNLISECVDRTFDLIALPGGMPGAEHMRDSRELTEMLKQQQKEGRLYGAICASPAVVLMHHGLLSGKRATCHP--DFSDRLENREEVDSRVVVDGNCVTSRGPGTAIEFALKLVELLFGSEKAAEVAKPMIV 182
BLAST of EWM28975.1 vs. NCBI_GenBank
Match: gi|1072840303|gb|OEU44596.1| (dihydroxyacetone kinase [Desulfobacterales bacterium S7086C20]) HSP 1 Score: 199.134 bits (505), Expect = 2.363e-60 Identity = 108/191 (56.54%), Postives = 133/191 (69.63%), Query Frame = 0 Query: 89 KKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLL 279 K+VLVP+A+G+EE+E+VTI+DVL RAGA VTVASV S QVT SRGVKLVAD+ I DC +DL+ PGG+PGAE+LRDSP L LL+RQ K RL AICASPAVVL HG L G+RATC+P F + L E + VV D VTS+GPGT L F+LTLV+ L G+ KA E+A+ ++ Sbjct: 3 KEVLVPIAEGTEELEAVTIVDVLRRAGAVVTVASV----------SGLQVTASRGVKLVADRLIADCATNVYDLVVLPGGMPGAENLRDSPELEILLRRQQKEGRLFGAICASPAVVLEHHGLLAGRRATCYPT--FATKLKSAEAAQSRVVVDDKCVTSQGPGTALDFSLTLVELLFGKEKAGEIAEAMV 181
BLAST of EWM28975.1 vs. NCBI_GenBank
Match: gi|470423694|ref|XP_004337623.1| (DJ1 family protein [Acanthamoeba castellanii str. Neff] >gi|440794449|gb|ELR15610.1| DJ1 family protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 196.052 bits (497), Expect = 2.426e-59 Identity = 105/192 (54.69%), Postives = 135/192 (70.31%), Query Frame = 0 Query: 89 KKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLV 280 KKVLVP+A+GSEEIESV IID L RAGA VTVASV ++ +VTCSR V+++AD I DCLG +DL+A PGG+PGAE LRDS L LL +Q ++ RL AA+CASP K+ATC+PA++FV +L + ++ E+ VV DG+ VTSRGPGT L FAL LV++L G AKA+E+ K +LV Sbjct: 2 KKVLVPIANGSEEIESVCIIDTLRRAGADVTVASV---------EATREVTCSRSVRILADALITDCLGNVYDLVALPGGMPGAERLRDSDQLKELLTQQKQSGRLYAAVCASP----------DDKQATCYPAQKFVDALKQKDNLEQRVVVDGNCVTSRGPGTALEFALQLVEQLYGAAKAQEIQKAMLV 174
BLAST of EWM28975.1 vs. NCBI_GenBank
Match: gi|298708461|emb|CBJ30585.1| (4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative [Ectocarpus siliculosus]) HSP 1 Score: 197.593 bits (501), Expect = 4.287e-59 Identity = 105/193 (54.40%), Postives = 135/193 (69.95%), Query Frame = 0 Query: 89 KKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLARYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLVD 281 K VLVPVADGSEEIESVTIID LVRAGA VTVASV P +VTCSRGVK+ AD I +C +WD + CPGG+PGA L+++ L +L++Q+ R+V AICA+PAVVL +HG L GK+ATC+PA F S + + E VV D +++TS+GP T++ FAL LV L G+ K++EVAKGLL + Sbjct: 57 KHVLVPVADGSEEIESVTIIDTLVRAGALVTVASVGPEV---------EVTCSRGVKIKADCKIAECEARDWDAVVCPGGMPGAVSLKENETLEAILRKQNSEGRIVGAICAAPAVVLASHGLLEGKQATCYPASVFQSKIPQLVS--EKVVVDQNLITSQGPATSMAFALQLVGSLFGQEKSDEVAKGLLFN 238
BLAST of EWM28975.1 vs. NCBI_GenBank
Match: gi|1148813952|ref|WP_077539720.1| (hypothetical protein [Phycisphaerae bacterium L21-RPul-D3] >gi|1146073943|gb|AQQ09196.1| Chaperone protein YajL [Phycisphaerae bacterium L21-RPul-D3]) HSP 1 Score: 194.126 bits (492), Expect = 1.709e-58 Identity = 105/193 (54.40%), Postives = 134/193 (69.43%), Query Frame = 0 Query: 89 KKVLVPVADGSEEIESVTIIDVLVRAGAAVTVASVMPSASTATLPSSWQVTCSRGVKLVADKGIDDCLGEEWDLIACPGGLPGAEHLRDSPALLTLLQRQDKAQRLVAAICASPAVVLHTHGFLTGKRATCFPAERFVSSLA-RYEDGEEGVVEDGHVVTSRGPGTTLRFALTLVDRLCGRAKAEEVAKGLLV 280 K L+P+ADGSEE+E+VTIIDVL RAG +T+ASV + VT SRG KLVAD I+ C G E+DLI PGG+PGAEHLRDS L +L+ Q +A+RL AAICASPA+VL +HG + GK+ TC+P SLA Y +GE+ VV DG+ +TSRGPGT + FAL L + L G+ AE+ A+G+LV Sbjct: 3 KTALLPIADGSEELEAVTIIDVLRRAGTELTIASV----------ADISVTMSRGTKLVADAPIEVCSGNEYDLIVLPGGMPGAEHLRDSRILTEMLKTQAEARRLYAAICASPAIVLASHGLMAGKKGTCYPG--LEHSLADSYLEGED-VVADGNCITSRGPGTAMAFALKLAELLEGKENAEKTAQGMLV 182 The following BLAST results are available for this feature:
BLAST of EWM28975.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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