EWM28973.1, cds1699 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28973.1 vs. NCBI_GenBank
Match: gi|585111462|gb|EWM28973.1| (lipoate-protein ligase b [Nannochloropsis gaditana]) HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
Query: 1 MIRQRTGTHSKNILWLSSRLPAHSCWLLILFSQILFINAFPTIPPPPSTRLSDALSFSPLPSHARDPVLLHDWSDRLTPYQDAWDTQHRLVDGKLASLADSSHGKAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAPAALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQEAWERQGKTGKLQVQDVTPLMVKAFEEVFGVALDSVQD 297
MIRQRTGTHSKNILWLSSRLPAHSCWLLILFSQILFINAFPTIPPPPSTRLSDALSFSPLPSHARDPVLLHDWSDRLTPYQDAWDTQHRLVDGKLASLADSSHGKAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAPAALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQEAWERQGKTGKLQVQDVTPLMVKAFEEVFGVALDSVQD
Sbjct: 1 MIRQRTGTHSKNILWLSSRLPAHSCWLLILFSQILFINAFPTIPPPPSTRLSDALSFSPLPSHARDPVLLHDWSDRLTPYQDAWDTQHRLVDGKLASLADSSHGKAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAPAALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQEAWERQGKTGKLQVQDVTPLMVKAFEEVFGVALDSVQD 297
BLAST of EWM28973.1 vs. NCBI_GenBank
Match: gi|553194454|ref|XP_005855958.1| (lipoyl(octanoyl) transferase [Nannochloropsis gaditana CCMP526] >gi|422293101|gb|EKU20401.1| lipoyl(octanoyl) transferase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 441.039 bits (1133), Expect = 3.948e-155 Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0
Query: 81 QDAWDTQHRLVDGKLASLADSSHGKAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAPAALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQEAWERQGKTGKLQVQDVTPLMVKAFEEVFGVALDSVQD 297
+DAWDTQHRLVDGKLASLADSSH KAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAPAALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQEAWERQGKTGKLQVQDVTPLMVKAFEEVFGVALDSVQD
Sbjct: 7 KDAWDTQHRLVDGKLASLADSSHEKAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAPAALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQEAWERQGKTGKLQVQDVTPLMVKAFEEVFGVALDSVQD 223
BLAST of EWM28973.1 vs. NCBI_GenBank
Match: gi|873239171|emb|CEL94587.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 265.003 bits (676), Expect = 5.558e-84 Identity = 130/224 (58.04%), Postives = 163/224 (72.77%), Query Frame = 0
Query: 70 LHDWSDRLTPYQDAWDTQHRLVDGKLASLADSSHGKAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAPAALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQEAWERQGKTGKLQVQDVTPLMVKAFEEVFGVALD 293
+D + PY+ +WD QHRL+D + LA + G D +L+QHPP +TLGT ST NIL ND + P +F+TERGGE T+HGPGQLV YP++DLRH+KQDLHWYLR+LEEV+IRTL LGV G R EGLTGVWVEGRKVAA+GV+V++W+TMHGVALN+DP M +F IVPCGI DRPVGS++E R G T + V L++ +F EVFGV L+
Sbjct: 109 FYDMWNETVPYEASWDLQHRLMDAMVDELA--ADGCTRRDMAILLQHPPVFTLGTASTEHNILATGNDTDDDPIPVFRTERGGEVTYHGPGQLVLYPIVDLRHHKQDLHWYLRSLEEVIIRTLERLGVEGERIEGLTGVWVEGRKVAAIGVRVRKWVTMHGVALNVDPNMAHFERIVPCGISDRPVGSVRECV-RDGVT----TERVAGLLMDSFAEVFGVQLE 325
BLAST of EWM28973.1 vs. NCBI_GenBank
Match: gi|499175658|ref|WP_010873245.1| (octanoyltransferase [Synechocystis sp. PCC 6803] >gi|3122377|sp|P74519.1|LIPB_SYNY3 RecName: Full=Octanoyltransferase; AltName: Full=Lipoate-protein ligase B; AltName: Full=Lipoyl/octanoyl transferase; AltName: Full=Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase >gi|1653711|dbj|BAA18623.1| LipB protein [Synechocystis sp. PCC 6803] >gi|339274313|dbj|BAK50800.1| lipoate-protein ligase B [Synechocystis sp. PCC 6803] >gi|359272279|dbj|BAL29798.1| lipoate-protein ligase B [Synechocystis sp. PCC 6803 substr. GT-I] >gi|359275449|dbj|BAL32967.1| lipoate-protein ligase B [Synechocystis sp. PCC 6803 substr. PCC-N] >gi|359278619|dbj|BAL36136.1| lipoate-protein ligase B [Synechocystis sp. PCC 6803 substr. PCC-P] >gi|451781342|gb|AGF52311.1| LipB protein [Synechocystis sp. PCC 6803] >gi|939196921|gb|ALJ68253.1| octanoyltransferase [Synechocystis sp. PCC 6803]) HSP 1 Score: 219.935 bits (559), Expect = 8.152e-68 Identity = 116/215 (53.95%), Postives = 141/215 (65.58%), Query Frame = 0
Query: 77 LTPYQDAWDTQHRLVDGKLASLADSSHGKAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAPAALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQEAWERQGKTGKLQVQDVTPLMVKAFEEVFGVA 291
L PY AW Q R V K + D L+L++HPP YTLGTGS + FDP P PA L++TERGGE T+H PGQLV YP+LDL H+++DLHWYLR LEEV+I TL L ++G R GLTGVW+EG KVAA+ +KV W+T HG ALNI P +E F HIVPCGIGDRPVGSL + L V+ V PL+++AF EVF V
Sbjct: 13 LVPYCQAWQYQRRWVRAK-------QRDRQREDGLMLLEHPPVYTLGTGSQTKYLKFDPAYP---PAELWRTERGGEVTYHCPGQLVGYPILDLNHFQKDLHWYLRQLEEVLIITLEKLDLQGERIAGLTGVWLEGHKVAAIAIKVSGWVTCHGFALNICPDLEGFSHIVPCGIGDRPVGSLNQF------LPGLTVEIVQPLVIQAFAEVFPVT 211
BLAST of EWM28973.1 vs. NCBI_GenBank
Match: gi|1180691310|ref|WP_084176480.1| (lipoyl(octanoyl) transferase [Limnothrix rosea]) HSP 1 Score: 219.55 bits (558), Expect = 9.003e-68 Identity = 112/199 (56.28%), Postives = 136/199 (68.34%), Query Frame = 0
Query: 62 SHARDPVLLHDWSDRLTPYQDAWDTQHRLVDGKLASLADSSHGKAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAPAALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQE 260
H +P L+ WS PY AW Q LVD L D LLL++HPP YTLGTGS + + FDP + N L++TERGGE T+H P QLV YP+L+L+ +++DLHWYLR LEEV+I+ LA G+RG R EGLTGVWVEGRKVAA+G+KVKRWITMHG ALN+ P + F IVPCGIGDRPVGSL +
Sbjct: 9 QHLLNPCLVKQWSR--VPYGVAWQWQRELVDNHLQCFHYP-------DRLLLLEHPPVYTLGTGSDEAFLRFDPTEDTNL---LYRTERGGEVTYHCPDQLVGYPILNLQRHQRDLHWYLRQLEEVIIQLLAVYGLRGDRLEGLTGVWVEGRKVAAIGIKVKRWITMHGFALNVCPDLTGFTKIVPCGIGDRPVGSLAQ 195
BLAST of EWM28973.1 vs. NCBI_GenBank
Match: gi|1115255654|gb|OKH20049.1| (lipoyl(octanoyl) transferase [Limnothrix rosea IAM M-220]) HSP 1 Score: 219.55 bits (558), Expect = 1.016e-67 Identity = 112/199 (56.28%), Postives = 136/199 (68.34%), Query Frame = 0
Query: 62 SHARDPVLLHDWSDRLTPYQDAWDTQHRLVDGKLASLADSSHGKAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAPAALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQE 260
H +P L+ WS PY AW Q LVD L D LLL++HPP YTLGTGS + + FDP + N L++TERGGE T+H P QLV YP+L+L+ +++DLHWYLR LEEV+I+ LA G+RG R EGLTGVWVEGRKVAA+G+KVKRWITMHG ALN+ P + F IVPCGIGDRPVGSL +
Sbjct: 7 QHLLNPCLVKQWSR--VPYGVAWQWQRELVDNHLQCFHYP-------DRLLLLEHPPVYTLGTGSDEAFLRFDPTEDTNL---LYRTERGGEVTYHCPDQLVGYPILNLQRHQRDLHWYLRQLEEVIIQLLAVYGLRGDRLEGLTGVWVEGRKVAAIGIKVKRWITMHGFALNVCPDLTGFTKIVPCGIGDRPVGSLAQ 193
BLAST of EWM28973.1 vs. NCBI_GenBank
Match: gi|1180117300|ref|WP_083636685.1| (lipoyl(octanoyl) transferase [Oscillatoriales cyanobacterium 'hensonii']) HSP 1 Score: 220.705 bits (561), Expect = 1.100e-67 Identity = 116/221 (52.49%), Postives = 141/221 (63.80%), Query Frame = 0
Query: 77 LTPYQDAWDTQHRLVDGKLASLADSSHGKAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAPAALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQEAWERQGKTGKLQVQDVTPLMVKAFEEVFGVALDSVQD 297
LTPY AW Q LV AD D LLL++HPP YTLG G++P + FDP + +++ ERGGE T+H PGQ++ YP+L+L Y+QDLHWYLR LEEV+IR LA G+ G R G TGVW+EGRKVAA+G+KV RWITMHG ALN+ P +E FRHIVPCGIGD+PVGSL E +Q V + AF EVFGV L D
Sbjct: 31 LTPYAMAWQWQQALV-------ADRRANPNLEDVLLLLEHPPVYTLGQGASPDFLKFDPAASE---VQVWRVERGGEVTYHCPGQIIGYPILNLHQYRQDLHWYLRQLEEVLIRVLAGYGLSGERLAGFTGVWLEGRKVAAIGIKVSRWITMHGFALNVCPDLEGFRHIVPCGIGDKPVGSLAEF------VPGIQPDQVRVAIAVAFSEVFGVTLKEPDD 235
BLAST of EWM28973.1 vs. NCBI_GenBank
Match: gi|1057119267|ref|WP_068515019.1| (octanoyltransferase [Leptolyngbya sp. O-77]) HSP 1 Score: 217.238 bits (552), Expect = 9.794e-67 Identity = 113/220 (51.36%), Postives = 147/220 (66.82%), Query Frame = 0
Query: 73 WSDRLTPYQDAWDTQHRLVDGKLASLADSSHGKAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAPAALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQEAWERQGKTGKLQVQDVTPLMVKAFEEVFGVAL 292
W L PY+ AW+ Q V+ +L +S D LLL++HPP YTLG G+T + FD + A + + ERGGE T+HGPGQLV YP+L+LRHY+QDLHWYLR LEEV+IR +AP G+ GGR +GLTGVWV+GRKV A+G+KV RW+TMHG +LN+ P M F IVPCGIGDRPVG L + W ++ V +V + ++F EVF V +
Sbjct: 17 WEAGLVPYKTAWEWQRSHVN-RLIQRPNSP------DLLLLLEHPPVYTLGQGATLDFVKFDL---ERTDAEIHRVERGGEVTYHGPGQLVGYPILNLRHYRQDLHWYLRQLEEVLIRAIAPFGLAGGRIDGLTGVWVDGRKVGAIGIKVSRWVTMHGFSLNVCPEMRGFGVIVPCGIGDRPVGCLAD-W-----IPEITVAEVQGAIAQSFAEVFEVTI 220
BLAST of EWM28973.1 vs. NCBI_GenBank
Match: gi|298714386|emb|CBJ27443.1| (lipoyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 223.402 bits (568), Expect = 9.962e-67 Identity = 121/219 (55.25%), Postives = 157/219 (71.69%), Query Frame = 0
Query: 78 TPYQDAWDTQHRLVDGKLASLA----DSSHGKAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAP-AALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQEAWERQGKTGKLQVQDVTPLMVKAFEEVFGVA 291
TPY D W+ Q + LA LA D S A D +LL QH +TLGTGS+ N+ F+P++ AP + +TERGGE T+HGPGQ+V YP+++LR Y++D+HWYLRALEE VIRTLA LG++G R EGLTGVWVEGRKVAAVGV+VKRWITMHG++LN+ P +E+FR IVP GI +R V SL E +G+ L + V L++++FEEVFGV+
Sbjct: 184 TPYNDGWEWQKQ----NLARLAERPDDLSSPDAELDRVLLTQHNAVFTLGTGSSLDNLRFEPDE---APFGEVVRTERGGEVTYHGPGQIVMYPIVNLRRYRKDIHWYLRALEETVIRTLAKLGLKGERIEGLTGVWVEGRKVAAVGVRVKRWITMHGLSLNVRPKLEHFRDIVPWGIEERTVSSL-EFLCAEGE--DLSMDRVGRLLLESFEEVFGVS 392
BLAST of EWM28973.1 vs. NCBI_GenBank
Match: gi|553731757|ref|WP_023066429.1| (lipoyl(octanoyl) transferase [Lyngbya aestuarii] >gi|550816011|gb|ERT07416.1| lipoyl(octanoyl) transferase [Lyngbya aestuarii BL J]) HSP 1 Score: 217.238 bits (552), Expect = 1.002e-66 Identity = 117/220 (53.18%), Postives = 145/220 (65.91%), Query Frame = 0
Query: 77 LTPYQDAWDTQHRLVDGKLASLADSSHGKAAFDSLLLVQHPPTYTLGTGSTPSNILFDPNDPQNAPAALFKTERGGEATWHGPGQLVAYPVLDLRHYKQDLHWYLRALEEVVIRTLAPLGVRGGREEGLTGVWVEGRKVAAVGVKVKRWITMHGVALNIDPPMEYFRHIVPCGIGDRPVGSLQEAWERQGKTGKLQVQDVTPLMVKAFEEVFGVALDSVQ 296
L PYQ AW Q LV H ++ D LLL++HPP YTLG G+ P I F+PN QNA L++ ERGGE T+H PGQLV YP+L+LR ++QDLHWYLR LEEV+IR LA GV+G R GLTGVW+ +KVAA+G+KV RWITMHG A+N+ P +E F HIVPCGI DR VG L E + +++V + KAF EVFGV L V+
Sbjct: 19 LVPYQIAWQWQKSLVQ------RHKQHPESD-DVLLLLEHPPVYTLGQGADPKFIKFNPNS-QNA--ELYRVERGGEVTYHCPGQLVGYPILNLRRHQQDLHWYLRQLEEVIIRVLAVYGVKGDRIAGLTGVWIADKKVAAIGIKVSRWITMHGFAINVCPDLEGFEHIVPCGISDRAVGRLIEF------IPTVALEEVRSQVQKAFAEVFGVELIIVE 222 The following BLAST results are available for this feature:
BLAST of EWM28973.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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