EWM30516.1, cds169 (CDS) Nannochloropsis gaditana

Overview
NameEWM30516.1
Unique Namecds169
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:446011..449646 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30516.1
Productmulti-sensor hybrid histidine kinase
Orig transcript idgnl|cribi|Naga_100013g50.9804.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:446011..449646 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0004871obsolete signal transducer activity
GO:0000155phosphorelay sensor kinase activity
GO:0016772transferase activity, transferring phosphorus-containing groups
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0000160phosphorelay signal transduction system
GO:0007165signal transduction
GO:0016310phosphorylation
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR011006CheY-like_superfamily
IPR009082Sig_transdc_His_kinase_dimeric
IPR005467Sig_transdc_His_kinase_core
IPR003594HATPase_C
IPR001789Sig_transdc_resp-reg_receiver
IPR003661EnvZ-like_dim/P
IPR004358Sig_transdc_His_kin-like_C
Homology
BLAST of EWM30516.1 vs. NCBI_GenBank
Match: gi|585113180|gb|EWM30516.1| (multi-sensor hybrid histidine kinase [Nannochloropsis gaditana])

HSP 1 Score: 2462.95 bits (6382), Expect = 0.000e+0
Identity = 1211/1211 (100.00%), Postives = 1211/1211 (100.00%), Query Frame = 0
Query:    1 MHRDALDASSLLPETFFTTNLHRNAWVHVLGFLPTTMRHRDPRGRWAADGGAPTSYSLGPSAAPLPSSTQAEVLFDGRDKEDVDCHHHSLEERARRTVFTCAWCALCLAGSNVLGSKVLSLGGTALFWPGPPIVAMLLVLSPLFMQRWLASTAFAVYLVMILLDFGKLNECLFLNVLFMVTDATEVFVVMTCLRAVLGIAPVSIIRTGVGINAILLFPLVLAPLKAGLNALLIYMCYGALNLPLSETLVIWLIGDLFTDFFVVYSVLVVRYYLQLYLIKVKEMKMCEREGRKEPEDAGRAETANAIGMGGSLRVPHGGPGESSMGGAGRTTPALTNGESIYHFTQTRYENGGWGQEEGDEEESEKEWGSDDSEYEDEEEDEEEDEEDEEEEEEEDEEDEEEEWKFENGGREIEPAESRNEEDAGSSDVPGKWSPYAPGSGVSHHRANGVRPDMVAKTDALGPGIPSNAAAVQQAGHPVKAWLHSPRMLWDVTAFVFFLSVSILTSFATILNHTRIARQPLFYLGSRLLFPVTGYVTVRYGQLVSCFIVGVVAISMLVTDFLLNEEQKTYGSVYITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESFFRGGPSMETMEVEEEEVAMPAAAGGPDCYSLPATGGGGGMRGGEMTGYFEDASQLPPGGQRHRGVGAASPYLSPGLPTTNSVSGVHTGFNAGLAPGAGVRSQQYLAGASPPPLHVSSAETKAGSHPFPPVLPPPHRNYKAKGHGLGLAITKQLVDLLHGKITVRSSLGLGSLFSILLPAEVAEGSSYEESLAGPGGGGGGGRADDPPPVRDLKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALSSIDPSFDLILLDLQLPDMHGIDVLKTLRKHADPLLAAMPIVVVSALVLDREKQECAQAGADGFITKPVKLGLLRQEIRSLWDSGRLRRREEREETGAEEHAAEERPAGERSGKEGGNSGIED 1211
            MHRDALDASSLLPETFFTTNLHRNAWVHVLGFLPTTMRHRDPRGRWAADGGAPTSYSLGPSAAPLPSSTQAEVLFDGRDKEDVDCHHHSLEERARRTVFTCAWCALCLAGSNVLGSKVLSLGGTALFWPGPPIVAMLLVLSPLFMQRWLASTAFAVYLVMILLDFGKLNECLFLNVLFMVTDATEVFVVMTCLRAVLGIAPVSIIRTGVGINAILLFPLVLAPLKAGLNALLIYMCYGALNLPLSETLVIWLIGDLFTDFFVVYSVLVVRYYLQLYLIKVKEMKMCEREGRKEPEDAGRAETANAIGMGGSLRVPHGGPGESSMGGAGRTTPALTNGESIYHFTQTRYENGGWGQEEGDEEESEKEWGSDDSEYEDEEEDEEEDEEDEEEEEEEDEEDEEEEWKFENGGREIEPAESRNEEDAGSSDVPGKWSPYAPGSGVSHHRANGVRPDMVAKTDALGPGIPSNAAAVQQAGHPVKAWLHSPRMLWDVTAFVFFLSVSILTSFATILNHTRIARQPLFYLGSRLLFPVTGYVTVRYGQLVSCFIVGVVAISMLVTDFLLNEEQKTYGSVYITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESFFRGGPSMETMEVEEEEVAMPAAAGGPDCYSLPATGGGGGMRGGEMTGYFEDASQLPPGGQRHRGVGAASPYLSPGLPTTNSVSGVHTGFNAGLAPGAGVRSQQYLAGASPPPLHVSSAETKAGSHPFPPVLPPPHRNYKAKGHGLGLAITKQLVDLLHGKITVRSSLGLGSLFSILLPAEVAEGSSYEESLAGPGGGGGGGRADDPPPVRDLKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALSSIDPSFDLILLDLQLPDMHGIDVLKTLRKHADPLLAAMPIVVVSALVLDREKQECAQAGADGFITKPVKLGLLRQEIRSLWDSGRLRRREEREETGAEEHAAEERPAGERSGKEGGNSGIED
Sbjct:    1 MHRDALDASSLLPETFFTTNLHRNAWVHVLGFLPTTMRHRDPRGRWAADGGAPTSYSLGPSAAPLPSSTQAEVLFDGRDKEDVDCHHHSLEERARRTVFTCAWCALCLAGSNVLGSKVLSLGGTALFWPGPPIVAMLLVLSPLFMQRWLASTAFAVYLVMILLDFGKLNECLFLNVLFMVTDATEVFVVMTCLRAVLGIAPVSIIRTGVGINAILLFPLVLAPLKAGLNALLIYMCYGALNLPLSETLVIWLIGDLFTDFFVVYSVLVVRYYLQLYLIKVKEMKMCEREGRKEPEDAGRAETANAIGMGGSLRVPHGGPGESSMGGAGRTTPALTNGESIYHFTQTRYENGGWGQEEGDEEESEKEWGSDDSEYEDEEEDEEEDEEDEEEEEEEDEEDEEEEWKFENGGREIEPAESRNEEDAGSSDVPGKWSPYAPGSGVSHHRANGVRPDMVAKTDALGPGIPSNAAAVQQAGHPVKAWLHSPRMLWDVTAFVFFLSVSILTSFATILNHTRIARQPLFYLGSRLLFPVTGYVTVRYGQLVSCFIVGVVAISMLVTDFLLNEEQKTYGSVYITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESFFRGGPSMETMEVEEEEVAMPAAAGGPDCYSLPATGGGGGMRGGEMTGYFEDASQLPPGGQRHRGVGAASPYLSPGLPTTNSVSGVHTGFNAGLAPGAGVRSQQYLAGASPPPLHVSSAETKAGSHPFPPVLPPPHRNYKAKGHGLGLAITKQLVDLLHGKITVRSSLGLGSLFSILLPAEVAEGSSYEESLAGPGGGGGGGRADDPPPVRDLKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALSSIDPSFDLILLDLQLPDMHGIDVLKTLRKHADPLLAAMPIVVVSALVLDREKQECAQAGADGFITKPVKLGLLRQEIRSLWDSGRLRRREEREETGAEEHAAEERPAGERSGKEGGNSGIED 1211          
BLAST of EWM30516.1 vs. NCBI_GenBank
Match: gi|553180010|ref|XP_005852803.1| (histidine kinase, partial [Nannochloropsis gaditana CCMP526] >gi|553195796|ref|XP_005856210.1| histidine kinase, partial [Nannochloropsis gaditana CCMP526] >gi|422292858|gb|EKU20160.1| histidine kinase, partial [Nannochloropsis gaditana CCMP526] >gi|422295733|gb|EKU23032.1| histidine kinase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1058.51 bits (2736), Expect = 0.000e+0
Identity = 518/518 (100.00%), Postives = 518/518 (100.00%), Query Frame = 0
Query:  389 EEEEEEDEEDEEEEWKFENGGREIEPAESRNEEDAGSSDVPGKWSPYAPGSGVSHHRANGVRPDMVAKTDALGPGIPSNAAAVQQAGHPVKAWLHSPRMLWDVTAFVFFLSVSILTSFATILNHTRIARQPLFYLGSRLLFPVTGYVTVRYGQLVSCFIVGVVAISMLVTDFLLNEEQKTYGSVYITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESFFRGGPSMETMEVEEEEVAMPAAAGGPDCYSLPATGGGGGMRGGEMTGYFEDASQLPPGGQRHRGVG 906
            EEEEEEDEEDEEEEWKFENGGREIEPAESRNEEDAGSSDVPGKWSPYAPGSGVSHHRANGVRPDMVAKTDALGPGIPSNAAAVQQAGHPVKAWLHSPRMLWDVTAFVFFLSVSILTSFATILNHTRIARQPLFYLGSRLLFPVTGYVTVRYGQLVSCFIVGVVAISMLVTDFLLNEEQKTYGSVYITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESFFRGGPSMETMEVEEEEVAMPAAAGGPDCYSLPATGGGGGMRGGEMTGYFEDASQLPPGGQRHRGVG
Sbjct:    1 EEEEEEDEEDEEEEWKFENGGREIEPAESRNEEDAGSSDVPGKWSPYAPGSGVSHHRANGVRPDMVAKTDALGPGIPSNAAAVQQAGHPVKAWLHSPRMLWDVTAFVFFLSVSILTSFATILNHTRIARQPLFYLGSRLLFPVTGYVTVRYGQLVSCFIVGVVAISMLVTDFLLNEEQKTYGSVYITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESFFRGGPSMETMEVEEEEVAMPAAAGGPDCYSLPATGGGGGMRGGEMTGYFEDASQLPPGGQRHRGVG 518          
BLAST of EWM30516.1 vs. NCBI_GenBank
Match: gi|585111304|gb|EWM28872.1| (multi-sensor hybrid histidine kinase [Nannochloropsis gaditana])

HSP 1 Score: 233.417 bits (594), Expect = 3.057e-59
Identity = 129/281 (45.91%), Postives = 184/281 (65.48%), Query Frame = 0
Query:  525 SRLLFPVTGYVTVRYGQLVSCFIVGVVAISMLVTDFLLNEEQKTYGSV----YITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRL 801
            SRL+ P+ G+VT R+GQ  SC  + V A  +            TYG +     +T        L+ P ++V+++WS+++LAVALAE+QD L LL  +N QLL Q +EL++AKL A++ALS+KTEFFARVS+EFRTPLN++LGF+EE+ +   P              +R+ YI+ +GESLLR+VDDILELFRLSS       Q L+++ + VDI ++F T+CDLV+VI+ ++     +  DP+LPRY+ +D+ RFSQLVMNL+ NA K S   GG + +RL
Sbjct:  343 SRLMIPLLGFVTFRFGQFGSCVALIVAAAGIFTV---------TYGQLDRGDRLTDIFYQIDLLLGPIVVVLITWSMTFLAVALAEKQDGLSLLEKRNFQLLVQGRELQQAKLEAQRALSAKTEFFARVSYEFRTPLNIILGFAEEIKRQDLP----------PYVQERIGYIITSGESLLRIVDDILELFRLSS-------QRLQIDESLVDIHAYFTTMCDLVQVITDKSQRRLERVQDPSLPRYVFLDKIRFSQLVMNLSSNAAK-STGTGGRIVLRL 596          

HSP 2 Score: 136.346 bits (342), Expect = 1.090e-28
Identity = 68/144 (47.22%), Postives = 99/144 (68.75%), Query Frame = 0
Query: 1052 LKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALSSIDPS---FDLILLDLQLPDMHGIDVLKTLRKHADPLLAAMPIVVVSALVLDREKQECAQAGADGFITKPVKLGLLRQEIRSLWDSGRLRRRE--EREETGAEEHA 1190
            L+I++VED+L NQ+VLGGML++D H V FVET   AL  +      FD+ LLD++LPD HG+ VL  +R H  P +A MP+VVV+A+ +D E+  C + GAD F+TKP++LG LR  + +L+  GR++ RE  +  E G E++A
Sbjct:  899 LRIMAVEDLLPNQMVLGGMLREDSHSVQFVETAFGALEMLSRHPGHFDVALLDIELPDAHGVTVLTRIRSHPSPRIAGMPVVVVTAVAMDGERNRCYRHGADDFVTKPIRLGTLRASLLALYKRGRIKPREGIKVVEDGKEDNA 1042          

HSP 3 Score: 66.6254 bits (161), Expect = 2.946e-7
Identity = 42/178 (23.60%), Postives = 82/178 (46.07%), Query Frame = 0
Query:   98 VFTCAWCALCLAGSNVLGSKVLSLGGTALFWPGPPIVAMLLVLSPLFMQRWLASTAFAVYLVMILLDFGKLNECLFLNVLFMVTDATEVFVVMTCLRAVLGIAPVSIIRTGVGINAILLFPLVLAPLKAGLNA-LLIYMCYGALNLPLSETLVI-WLIGDLFTDFFVVYSVLVVRYYL 273
            + T  W +L L  + V  + ++  GG  L W   P   +LL +       +  +    V L  + L  G+++       + +V D   + +    LR ++    + I+RT   +  ++L+ L++ P  + +N  +++ +    +       LV+ WL+GD F  +F VY+VLV RY +
Sbjct:  101 LLTALWSSLILTAAVVASAHIVLSGGVVLLWFLTPASTLLLCIQARACWPYTFTAIVGVELTAVCLGHGRISRDSLAAFIIIVVDLLNISLGTLLLRPLVA-GSIHIVRTSTFVRYLVLYVLLITPAFSLVNGGIIVLLPSNNITWMGGRQLVVAWLLGDFFATYFTVYAVLVFRYTI 277          
BLAST of EWM30516.1 vs. NCBI_GenBank
Match: gi|553183571|ref|XP_005853923.1| (histidine kinase [Nannochloropsis gaditana CCMP526] >gi|422295135|gb|EKU22434.1| histidine kinase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 195.667 bits (496), Expect = 3.191e-47
Identity = 128/320 (40.00%), Postives = 185/320 (57.81%), Query Frame = 0
Query:  491 VTAFVFFLSVSILTSFATILNHTRIARQPLFYLG----SRLLFPVTGYVTVRYGQLVSCFIVGVVAISMLVTDFLLNEEQKTYGSV----YITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQDTLRLLRDKNAQLLAQEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFS-QLVMNLAFNACKYSRPAGGVVSIRL 801
            V  +   L V+ + + A   + T     P  +LG    SRL+ P+ G+VT R+GQ  SC  + V A  +            TYG +     +T        L+ P ++V+++WS+++LAVALAE+QD L LL  +N QLL Q +EL++AKL A++ALS+KTEFFARVS+EFRTPLN++LGF+EE+ +   P              +R+ YI+ +GESLLR+VDDILELFRLSS       Q L+++ + VDI ++F T+CDLV+VI+ ++            P       G  +  LVMNL+ NA K S   GG + +RL
Sbjct:  309 VVEYAGVLVVTYMVAHAVATSST----SPRDHLGPRIVSRLMIPLLGFVTFRFGQFGSCVALIVAAAGIFTV---------TYGQLDRGDRLTDIFYQIDLLLGPIVVVLITWSMTFLAVALAEKQDGLSLLEKRNFQLLVQGRELQQAKLEAQRALSAKTEFFARVSYEFRTPLNIILGFAEEIKRQDLP----------PYVQERIGYIITSGESLLRIVDDILELFRLSS-------QRLQIDESLVDIHAYFITMCDLVQVITDKS------------PAPAGTGSGSLAPTLVMNLSSNAAK-STGTGGRIVLRL 585          

HSP 2 Score: 136.346 bits (342), Expect = 9.860e-29
Identity = 68/144 (47.22%), Postives = 99/144 (68.75%), Query Frame = 0
Query: 1052 LKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALSSIDPS---FDLILLDLQLPDMHGIDVLKTLRKHADPLLAAMPIVVVSALVLDREKQECAQAGADGFITKPVKLGLLRQEIRSLWDSGRLRRRE--EREETGAEEHA 1190
            L+I++VED+L NQ+VLGGML++D H V FVET   AL  +      FD+ LLD++LPD HG+ VL  +R H  P +A MP+VVV+A+ +D E+  C + GAD F+TKP++LG LR  + +L+  GR++ RE  +  E G E++A
Sbjct:  888 LRIMAVEDLLPNQMVLGGMLREDSHSVQFVETAFGALEMLSRHPGHFDVALLDIELPDAHGVTVLTRIRSHPSPRIAGMPVVVVTAVAMDGERNRCYRHGADDFVTKPIRLGTLRASLLALYKRGRIKPREGIKVVEDGKEDNA 1031          

HSP 3 Score: 66.2402 bits (160), Expect = 3.221e-7
Identity = 42/178 (23.60%), Postives = 82/178 (46.07%), Query Frame = 0
Query:   98 VFTCAWCALCLAGSNVLGSKVLSLGGTALFWPGPPIVAMLLVLSPLFMQRWLASTAFAVYLVMILLDFGKLNECLFLNVLFMVTDATEVFVVMTCLRAVLGIAPVSIIRTGVGINAILLFPLVLAPLKAGLNA-LLIYMCYGALNLPLSETLVI-WLIGDLFTDFFVVYSVLVVRYYL 273
            + T  W +L L  + V  + ++  GG  L W   P   +LL +       +  +    V L  + L  G+++       + +V D   + +    LR ++    + I+RT   +  ++L+ L++ P  + +N  +++ +    +       LV+ WL+GD F  +F VY+VLV RY +
Sbjct:  101 LLTALWSSLILTAAVVASAHIVLSGGVVLLWFLTPASTLLLCIQARACWPYTFTAIVGVELTAVCLGHGRISRDSLAAFIIIVVDLLNISLGTLLLRPLVA-GSIHIVRTSTFVRYLVLYVLLITPAFSLVNGGIIVLLPSNNITWMGGRQLVVAWLLGDFFATYFTVYAVLVFRYTI 277          
BLAST of EWM30516.1 vs. NCBI_GenBank
Match: gi|1174927435|ref|WP_081600655.1| (hypothetical protein [beta proteobacterium L13])

HSP 1 Score: 134.806 bits (338), Expect = 2.643e-28
Identity = 150/560 (26.79%), Postives = 243/560 (43.39%), Query Frame = 0
Query:  627 ELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESFFRGGPSMET--------MEVEEEEVAMPAAAGGPDCYSLPATGGGGGMRGGEMTGYFEDASQLPPGG--------QRHRGVGAASPYLSPGLPTTNSVSGVHTGFNAGLAPGAGV-RSQQYLAGASPPPLHVSSAETKAGSHPFPPVLPPPHRNYKAKGHGLGLAITKQLV-----DLLHGKITVRSSLGLGS-------LFSILLPAEVAEGSSYEESLAGPGGGGGGGRADDPPPVRDLKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALS-SIDPSFDLILLDLQLPDMHGIDVLKTLRKHADPLLAAMPIVVVSALVLDREKQECAQAGADGFITKP 1156
            EL++A   AE+A  +K+ F AR+SHE RTP+N ++G S   ++             +    D +Q I  AG SLL +++DIL+  R     S+ G   L++   A  + SF G++ D +        L  I  + P +PR L  D  R  Q+++NL  NA K++    GVV + ++     +    G +TL   V D G GI      R+F+ F +   S+          + + ++ VA  A  G  +  S P   G G      +T  +E  ++L P G         RH G+   +  +  GL           G N   A G G  R+  Y  G   P + V+              LP    N  A  H   LA  ++LV     D+L   I  R S  +         L   L PA++ +   +E+    P  G     A +   ++  +IL  ED ++N+ +   +L++ G  V   E G  A+  ++   FD +L+D+ +P M G++  + +R      L  +PI+ V+A   D  +QE  +AG D  ++KP
Sbjct:  299 ELQQAVRHAEEANRAKSGFLARMSHEIRTPMNAIIGLSNLALQHSS----------SPRERDYLQKIHHAGNSLLVIINDILDFSR-----SEIGT--LQLEQRAFKLESFIGSLTDQLRPQLDSKQLELIIDIAPDVPRVLSGDTVRLGQILLNLLNNAVKFTD--SGVVCLHISRHAQ-QATEDGVVTLSFAVSDTGIGIDEAHLTRLFQPFTQADESITRRYGGTGLGLAICQQLVA--AMGGKIEAASSP---GNGSCFSFAITLPYEAGTELAPLGAKSTALLIHRHEGIRENTSDMLQGL-----------GLNVISASGIGTARAMLYQHGDITPGILVAE-------------LP---ENATAAEH---LANLRRLVPGREPDIL--LIAARYSGSVADDDSPVPLLVKPLSPAQLRQAILHEQQ---PQTGQASQTASNGGCLQGKQILLAEDNVINRQIACELLEEAGASVSCAENGQQAVEMALHGLFDAVLMDVHMPVMDGMEASRQIRSQG---LTTLPIIAVTAHAFDAARQEALEAGMDEHLSKP 795          
BLAST of EWM30516.1 vs. NCBI_GenBank
Match: gi|938272281|gb|KPQ07391.1| (Signal transduction histidine kinase [Rhodobacteraceae bacterium HLUCCA12])

HSP 1 Score: 131.339 bits (329), Expect = 4.240e-27
Identity = 160/588 (27.21%), Postives = 240/588 (40.82%), Query Frame = 0
Query:  614 LRDKNAQLLAQEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYS--RPAGGVVSIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESFFRGGPSM---------------ETMEVEEEEVAMPAAAGGPDCY--SLPATGGGGGMRGGEMTGYFEDASQLPPG-GQRHRGVGAASPYLSPGLPTTNSVSGVHTGFNAGLAPGAGVRSQQYLAGASPPPL---HVSSAETKAGSHPFPP-------VLPPPHRNYKAKGHGLGLAITKQLVDLLHGKITVRSSLGLGSLFSILLPAEVAEGSSYEESLAGPGGGGGGGRADDPPPVRDLKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALSSIDPS-FDLILLDLQLPDMHGIDVLKTLRKH----ADPLLAAMPIVVVSALVLDREKQECAQAGADGFITKPVKLGLLRQEI 1166
            LRD + +L A+   L  A+ +AEQA  +K+ F A +SHE RTPLN VLGF+E L              L ++ A  +Q++ ++ + LL ++D++L+L ++ +         L +     D+P+       ++   + +  +     +DPALPR ++ D  R  Q+V NL  NA K+S      G V +R    G          TL L  +DNG G+   V+ RIF+ F +G  S+                 +E  E  + + +A G    +  SLP            + G  E A   PP     H  +  ++ Y S  L    ++   H G      P AG       +GASPP      V  A      HP  P       +  P H    A   G  L       D L   +     LGL +      PA    G+ ++     P                   IL VED  +NQ V+   L   G      + G  ALS ++ + + LIL DL +P M G  +   +R      A  L  ++ IV ++A VL  E     +AG DGF+TKP  L  L + I
Sbjct:  599 LRDISLRLAAEADRL--ARTSAEQANQAKSIFLATMSHEIRTPLNAVLGFAEVLSHS----------RLDSDQAGLLQHMRSSAQHLLGLIDNVLDLSKIEANE-------LTIERERFDLPALILDNARVLGGFALQRNVRISLFIDPALPRLVVGDPSRLRQVVYNLLGNAIKFSAGHDGQGHVKLRARMTGATTP------TLDLSFEDNGIGMTEAVRARIFQPFVQGEESITRRFGGTGLGLTITRRIVEKMEGAITLDSAPGRGSTFRVSLP------------LEGTSEPAEARPPRLSGLHCLIVESTVYPSDDL----ALYLHHEGARVTRLPSAG-------SGASPPVFTDADVVIAAPDGTDHPALPSDVPEVLICDPRHTETDA-AQGTCLRPDLLTCDSLVKAVNRACGLGLRATQDSQRPATTDAGTRFDARCYQP-------------------ILVVEDDPMNQKVILRQLDLLGLSADLAKNGAEALSMLEKARYGLILADLHMPVMDGYAMTAAIRSREAIDAVELARSISIVALTANVLSDEIGRTRKAGFDGFLTKPTTLVQLAETI 1118          
BLAST of EWM30516.1 vs. NCBI_GenBank
Match: gi|916336621|ref|WP_051071667.1| (hybrid sensor histidine kinase/response regulator [Azoarcus sp. KH32C])

HSP 1 Score: 127.872 bits (320), Expect = 2.186e-26
Identity = 103/280 (36.79%), Postives = 146/280 (52.14%), Query Frame = 0
Query:  567 KTYGSVYITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQ--DTLRLLRDKNAQLLAQEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESFFRGG 844
            KT+ SV+     T+  ALV     V V+    Y     AER+   T+ ++RD   +LL +E EL +AK  AE A  +K+EF + +SHE RTPLN ++GFS+ L  P  P D  Q   L        QYI+  G+ LLR++DDIL+L ++ S     GG  L ++ T  D         +  E +++   +  +  L   LP  ++ID  RF Q+++NL  NA KY+RP G    +RLT E    DGR     LR+ V D G GIP E    +F+ F R G
Sbjct:  278 KTHASVF-GELCTIGSALVH----VEVNSMGLYGETGQAERKFIGTVGVIRDITERLLFEE-ELNQAKEMAETASRAKSEFLSSMSHELRTPLNAIMGFSQLLDSPEAPLDDNQKQCL--------QYIVDGGKHLLRLIDDILDLAKIES-----GGNTLDIHST--DPAPLLKFALEASEKLARPRQVAVVAELPERLPN-VMIDATRFRQVMLNLLSNAIKYNRPEG---EVRLTAE--TRDGR-----LRVSVSDTGHGIPVERMPELFQPFNRLG 525          

HSP 2 Score: 67.781 bits (164), Expect = 9.201e-8
Identity = 56/193 (29.02%), Postives = 98/193 (50.78%), Query Frame = 0
Query:  981 KGHGLGLAITKQLVDLLHGKITVRSSLGLGSLFSILLPAEVAEGSSYEESLAGPGGGGGGGRADDPPPVRDLKILSVEDILVNQIVLGGMLQQDGHRV--VFVETGTAALSSIDPSF----DLILLDLQLPDMHGIDVLKTLRKHADPLLAAMPIVVVSALVLDREKQECAQAGADGFITKPVKLGLLRQEIR 1167
            +G G+GL ITK+LV+ + G+I V S +G+GS F    P +       E++   P             P R + IL VED  +N +    ++Q+   RV  + +    +A   ID +     DLIL+D++LP + G+D ++ L+  + P    +P++ V+A  +  + +    AG   ++TKP+ L  L + +R
Sbjct:  532 EGTGIGLVITKRLVESMGGEIGVDSDVGVGSTFWAEFPVDPTPELDIEDAEEVPSRDFIATL----DPGRPVNILYVEDNPINAL----LMQRSLARVPGLVLHIRESAEEGIDFAHHHCPDLILMDVRLPGISGVDAVRILK--SIPETCDIPVIAVTADAMLHDIRNARDAGFHAYLTKPIDLDTLYERLR 714          
BLAST of EWM30516.1 vs. NCBI_GenBank
Match: gi|358637112|dbj|BAL24409.1| (hypothetical protein AZKH_2096 [Azoarcus sp. KH32C])

HSP 1 Score: 127.872 bits (320), Expect = 2.197e-26
Identity = 103/280 (36.79%), Postives = 146/280 (52.14%), Query Frame = 0
Query:  567 KTYGSVYITSFSTLFQALVCPTLIVIVSWSISYLAVALAERQ--DTLRLLRDKNAQLLAQEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESFFRGG 844
            KT+ SV+     T+  ALV     V V+    Y     AER+   T+ ++RD   +LL +E EL +AK  AE A  +K+EF + +SHE RTPLN ++GFS+ L  P  P D  Q   L        QYI+  G+ LLR++DDIL+L ++ S     GG  L ++ T  D         +  E +++   +  +  L   LP  ++ID  RF Q+++NL  NA KY+RP G    +RLT E    DGR     LR+ V D G GIP E    +F+ F R G
Sbjct:  294 KTHASVF-GELCTIGSALVH----VEVNSMGLYGETGQAERKFIGTVGVIRDITERLLFEE-ELNQAKEMAETASRAKSEFLSSMSHELRTPLNAIMGFSQLLDSPEAPLDDNQKQCL--------QYIVDGGKHLLRLIDDILDLAKIES-----GGNTLDIHST--DPAPLLKFALEASEKLARPRQVAVVAELPERLPN-VMIDATRFRQVMLNLLSNAIKYNRPEG---EVRLTAE--TRDGR-----LRVSVSDTGHGIPVERMPELFQPFNRLG 541          

HSP 2 Score: 68.1662 bits (165), Expect = 8.939e-8
Identity = 56/193 (29.02%), Postives = 98/193 (50.78%), Query Frame = 0
Query:  981 KGHGLGLAITKQLVDLLHGKITVRSSLGLGSLFSILLPAEVAEGSSYEESLAGPGGGGGGGRADDPPPVRDLKILSVEDILVNQIVLGGMLQQDGHRV--VFVETGTAALSSIDPSF----DLILLDLQLPDMHGIDVLKTLRKHADPLLAAMPIVVVSALVLDREKQECAQAGADGFITKPVKLGLLRQEIR 1167
            +G G+GL ITK+LV+ + G+I V S +G+GS F    P +       E++   P             P R + IL VED  +N +    ++Q+   RV  + +    +A   ID +     DLIL+D++LP + G+D ++ L+  + P    +P++ V+A  +  + +    AG   ++TKP+ L  L + +R
Sbjct:  548 EGTGIGLVITKRLVESMGGEIGVDSDVGVGSTFWAEFPVDPTPELDIEDAEEVPSRDFIATL----DPGRPVNILYVEDNPINAL----LMQRSLARVPGLVLHIRESAEEGIDFAHHHCPDLILMDVRLPGISGVDAVRILK--SIPETCDIPVIAVTADAMLHDIRNARDAGFHAYLTKPIDLDTLYERLR 730          
BLAST of EWM30516.1 vs. NCBI_GenBank
Match: gi|1149994351|ref|WP_077921020.1| (hybrid sensor histidine kinase/response regulator [Spirosoma sp. 209])

HSP 1 Score: 127.102 bits (318), Expect = 9.605e-26
Identity = 71/223 (31.84%), Postives = 128/223 (57.40%), Query Frame = 0
Query:  624 QEKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRLTNEGPVEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESFFRGGPS 846
            Q  ELR+AKL AEQA  +K+EF A +SHE RTPLN V+GF++ ++K        Q++++ +++A+          +LL +++DIL+  ++ +         L +++  VD+         ++   +++ GL  + +L   LPR++ +D  R  Q+++NL  NA K++    G + +++    P+ D R   +T R +V+D G GI PE+++RIFE+F +  PS
Sbjct:  653 QRDELRKAKLLAEQASMAKSEFLANMSHEIRTPLNGVIGFTDLVLKTSLNATQHQYLSIVSQSAN----------ALLSIINDILDFSKIEAGK-------LELSVEKVDLYELSSQAAGIITYQAQQKGLEMLLNLPTNLPRFVHVDSVRLKQVLVNLLGNAVKFTE--RGEIELKI---KPLTDSRQPLVTYRFEVRDTGIGIQPEMQERIFEAFSQADPS 853          
BLAST of EWM30516.1 vs. NCBI_GenBank
Match: gi|1180673500|ref|WP_084158680.1| (hypothetical protein [Desulfovibrio alcoholivorans])

HSP 1 Score: 124.405 bits (311), Expect = 2.137e-25
Identity = 89/242 (36.78%), Postives = 128/242 (52.89%), Query Frame = 0
Query:  602 VALAERQDTLRLLRDKNAQLLAQ-EKELREAKLAAEQALSSKTEFFARVSHEFRTPLNVVLGFSEELIKPPPPGDGGQWVALTAETADRVQYILAAGESLLRVVDDILELFRLSSTHSQKGGQLLRVNMTAVDIPSFFGTVCDLVEVISKENGLHFIKHLDPALPRYLIIDRGRFSQLVMNLAFNACKYSRPAGGVVSIRLTNEGP--VEDGRPGFITLRLDVQDNGPGIPPEVKDRIFESF 840
            VA  ER  TL L+  ++  L  Q E+ L EA+ AA  A  +KTEF A +SHE RTP++++LG +E L          +  AL  E A  +  + +AG+ LL +++DIL++       SQ     L +   + D  +  G V D++ V  +E GL F   LD  LP  ++ D  R  Q+++NL +NA K++  A G +++  T  G      G PG   LRLDV D G GI PE  DRIF  F
Sbjct:  274 VAFIERGRTLSLVAARDLTLRKQYEQRLAEARDAAMNANRAKTEFLANMSHEIRTPMHIILGMAELL----------RETALAPEQARYLTSLESAGQVLLHLINDILDI-------SQIEANKLELRPQSFDPAALVGQVRDMMAVAVEEKGLSFTVRLDAKLPARMVNDPDRVRQVLLNLLWNAVKFT--AAGGIALEATRCGAPGAPSGAPG---LRLDVTDTGVGIAPEDCDRIFAPF 493          

HSP 2 Score: 77.411 bits (189), Expect = 9.993e-11
Identity = 58/184 (31.52%), Postives = 95/184 (51.63%), Query Frame = 0
Query:  979 KAKGHGLGLAITKQLVDLLHGKITVRSSLGLGSLFSILLPAEVAE--GSSYEESLAGPGGGGGGGRADDPPPVRDLKILSVEDILVNQIVLGGMLQQDGHRVVFVETGTAALSSIDP-SFDLILLDLQLPDMHGIDVLKTLRK-HADPLLAAMPIVVVSALVLDREKQECAQAGADGFITKPVK 1158
            +  G GLGLAI K LV+ + G I+V S  G GS F+  LP+   E   +S  ES   P       R          ++L VED L N+ ++   L ++ + + F  TG  AL+   P  FD++L+D+++P++ G    + +R+  A       P++++SA      +++   AG D F+TKPV+
Sbjct:  501 RPTGTGLGLAICKSLVERMGGAISVDSVPGQGSRFTCTLPSLSGEKHDASRRESATSPTPPPLARRR---------RLLLVEDSLANREMVRLFLDKEPYDIAFASTGVEALTRFAPGRFDIVLMDMEMPELDGCAATEAIRRVEAVSRAPRTPVLMLSAHAFADYERKALAAGCDAFLTKPVR 675          
The following BLAST results are available for this feature:
BLAST of EWM30516.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113180|gb|EWM30516.1|0.000e+0100.00multi-sensor hybrid histidine kinase [Nannochlorop... [more]
gi|553180010|ref|XP_005852803.1|0.000e+0100.00histidine kinase, partial [Nannochloropsis gaditan... [more]
gi|585111304|gb|EWM28872.1|3.057e-5945.91multi-sensor hybrid histidine kinase [Nannochlorop... [more]
gi|553183571|ref|XP_005853923.1|3.191e-4740.00histidine kinase [Nannochloropsis gaditana CCMP526... [more]
gi|1174927435|ref|WP_081600655.1|2.643e-2826.79hypothetical protein [beta proteobacterium L13][more]
gi|938272281|gb|KPQ07391.1|4.240e-2727.21Signal transduction histidine kinase [Rhodobactera... [more]
gi|916336621|ref|WP_051071667.1|2.186e-2636.79hybrid sensor histidine kinase/response regulator ... [more]
gi|358637112|dbj|BAL24409.1|2.197e-2636.79hypothetical protein AZKH_2096 [Azoarcus sp. KH32C... [more]
gi|1149994351|ref|WP_077921020.1|9.605e-2631.84hybrid sensor histidine kinase/response regulator ... [more]
gi|1180673500|ref|WP_084158680.1|2.137e-2536.78hypothetical protein [Desulfovibrio alcoholivorans... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna169rna169Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications