EWM28995.1, cds1672 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28995.1 vs. NCBI_GenBank
Match: gi|585111494|gb|EWM28995.1| (serine threonine protein kinase, partial [Nannochloropsis gaditana]) HSP 1 Score: 595.504 bits (1534), Expect = 0.000e+0 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
Query: 1 MEPPQGAEPAMSLDESNGSHQATASNLPRRGGLTQNSHNHSLASFASHEGLPTGEAGGGAGKRGMIGGHAASTAVAVVPVGKDGVVEHSPQGRYVRFNTRLDACAYKEIWKAFDTSEGVEVAWNTLFLEEVPRSDKKRILNEIRILEKIDHDNIITFYTSWYNRHTKQIVFITELMNNHNNGSLYAFVQPIPILRWRIVKRWLRQILEGLAFLHSQDPPIIHRNINCENIFIIANTGELKIGDLGLSTVSQRAESCVGTAPFMAPELFEEDYDEKVGVTPLSPPSL 286
MEPPQGAEPAMSLDESNGSHQATASNLPRRGGLTQNSHNHSLASFASHEGLPTGEAGGGAGKRGMIGGHAASTAVAVVPVGKDGVVEHSPQGRYVRFNTRLDACAYKEIWKAFDTSEGVEVAWNTLFLEEVPRSDKKRILNEIRILEKIDHDNIITFYTSWYNRHTKQIVFITELMNNHNNGSLYAFVQPIPILRWRIVKRWLRQILEGLAFLHSQDPPIIHRNINCENIFIIANTGELKIGDLGLSTVSQRAESCVGTAPFMAPELFEEDYDEKVGVTPLSPPSL
Sbjct: 1 MEPPQGAEPAMSLDESNGSHQATASNLPRRGGLTQNSHNHSLASFASHEGLPTGEAGGGAGKRGMIGGHAASTAVAVVPVGKDGVVEHSPQGRYVRFNTRLDACAYKEIWKAFDTSEGVEVAWNTLFLEEVPRSDKKRILNEIRILEKIDHDNIITFYTSWYNRHTKQIVFITELMNNHNNGSLYAFVQPIPILRWRIVKRWLRQILEGLAFLHSQDPPIIHRNINCENIFIIANTGELKIGDLGLSTVSQRAESCVGTAPFMAPELFEEDYDEKVGVTPLSPPSL 286
BLAST of EWM28995.1 vs. NCBI_GenBank
Match: gi|224006365|ref|XP_002292143.1| (mitogen activated protein kinase-like protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220972662|gb|EED90994.1| mitogen activated protein kinase-like protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 228.024 bits (580), Expect = 1.861e-70 Identity = 104/197 (52.79%), Postives = 157/197 (79.70%), Query Frame = 0
Query: 85 VVEHSPQGRYVRFNTRLDACAYKEIWKAFDTSEGVEVAWNTLFLEEVPRSDKKRILNEIRILEKIDHDNIITFYTSWYNRHTKQIVFITELMNNHNNGSLYAFVQPIPILRWRIVKRWLRQILEGLAFLHSQDPPIIHRNINCENIFIIANTGELKIGDLGLST-VSQRAE-SCV-GTAPFMAPELFEEDYDEKVGV 278
+VE SP RY+RF +L + AYK++++A+DT EG+EVAWN + L VP++++ RI+NE+R+LE++ H NII+F+ SW NR T++++F+TE++ ++G+L +FVQ + ++RW+I KRW QIL+GL +LHSQDPPIIHR++ C+NIFI +G+L+IGD GLST +S++ + SCV GT FMAPEL++E+Y+EKV V
Sbjct: 6 IVEKSPAERYIRFKEKLGSGAYKDVYRAYDTIEGIEVAWNVVKLGGVPKAERIRIVNEVRLLERLHHPNIISFHGSWVNRETERVIFVTEIL---SSGTLKSFVQKVQLIRWKIFKRWAIQILKGLEYLHSQDPPIIHRDLKCDNIFINGTSGDLRIGDFGLSTAISKKNQVSCVLGTPEFMAPELYDENYNEKVDV 199
BLAST of EWM28995.1 vs. NCBI_GenBank
Match: gi|970658354|gb|KUF96127.1| (hypothetical protein AM588_10005978 [Phytophthora nicotianae]) HSP 1 Score: 237.269 bits (604), Expect = 5.112e-70 Identity = 103/201 (51.24%), Postives = 155/201 (77.11%), Query Frame = 0
Query: 83 DGVVEHSPQGRYVRFNTRLDACAYKEIWKAFDTSEGVEVAWNTLFLEEVPRSDKKRILNEIRILEKIDHDNIITFYTSWYNRHTKQIVFITELMNNHNNGSLYAFVQPIPILRWRIVKRWLRQILEGLAFLHSQDPPIIHRNINCENIFIIANTGELKIGDLGLST---VSQR--AESCVGTAPFMAPELFEEDYDEKVGV 278
D +EHSP+GRY+RF+ RL AYK ++KA+DT +G++VAWN + + +P ++K RI+ E+++L+K++H NII FY SW+++ Q+VFITE+M +G+L ++++ + ++W+I+KRW QILEGL +LHSQ+PP+IHR++ C+NIF+ NTG+L+IGDLGLST V +R A+S +GT FMAPEL++E YDEKV V
Sbjct: 13 DRPMEHSPRGRYIRFDIRLGTGAYKSVYKAYDTDQGIDVAWNAIDIGLLPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSKEKNQVVFITEIM---TSGTLKSYIKRVQFIKWKIIKRWCIQILEGLHYLHSQNPPVIHRDLKCDNIFVNGNTGDLRIGDLGLSTQLAVDKRSKAQSVLGTPEFMAPELYDESYDEKVDV 210
BLAST of EWM28995.1 vs. NCBI_GenBank
Match: gi|953488020|emb|CEG48037.1| (wnk protein kinase [Plasmopara halstedii]) HSP 1 Score: 240.736 bits (613), Expect = 7.684e-69 Identity = 104/201 (51.74%), Postives = 155/201 (77.11%), Query Frame = 0
Query: 83 DGVVEHSPQGRYVRFNTRLDACAYKEIWKAFDTSEGVEVAWNTLFLEEVPRSDKKRILNEIRILEKIDHDNIITFYTSWYNRHTKQIVFITELMNNHNNGSLYAFVQPIPILRWRIVKRWLRQILEGLAFLHSQDPPIIHRNINCENIFIIANTGELKIGDLGLST---VSQR--AESCVGTAPFMAPELFEEDYDEKVGV 278
D VEHSP+GRY+RF+ RL AYK ++KA+DT +G++VAWN + + +P ++K RI+ E+++L+K++H NII FY SW+++ Q+VFITE+M +G+L ++++ + ++W+I+KRW QILEGL +LHSQ+PP+IHR++ C+NIF+ NTG+L+IGDLGLST V +R A+S +GT FMAPEL++E YDEKV V
Sbjct: 13 DRPVEHSPRGRYIRFDIRLGTGAYKSVYKAYDTDQGIDVAWNAIDIGLLPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSKEKNQVVFITEIM---TSGTLKSYIKRVQFIKWKIIKRWCIQILEGLHYLHSQNPPVIHRDLKCDNIFVNGNTGDLRIGDLGLSTQLAVDKRSKAQSVLGTPEFMAPELYDESYDEKVDV 210
BLAST of EWM28995.1 vs. NCBI_GenBank
Match: gi|301101122|ref|XP_002899650.1| (serine/threonine protein kinase [Phytophthora infestans T30-4] >gi|262103958|gb|EEY62010.1| serine/threonine protein kinase [Phytophthora infestans T30-4]) HSP 1 Score: 238.81 bits (608), Expect = 1.060e-68 Identity = 103/201 (51.24%), Postives = 155/201 (77.11%), Query Frame = 0
Query: 83 DGVVEHSPQGRYVRFNTRLDACAYKEIWKAFDTSEGVEVAWNTLFLEEVPRSDKKRILNEIRILEKIDHDNIITFYTSWYNRHTKQIVFITELMNNHNNGSLYAFVQPIPILRWRIVKRWLRQILEGLAFLHSQDPPIIHRNINCENIFIIANTGELKIGDLGLST---VSQR--AESCVGTAPFMAPELFEEDYDEKVGV 278
D +EHSP+GRY+RF+ RL AYK ++KA+DT +G++VAWN + + +P ++K RI+ E+++L+K++H NII FY SW+++ Q+VFITE+M +G+L ++++ + ++W+I+KRW QILEGL +LHSQ+PP+IHR++ C+NIF+ NTG+L+IGDLGLST V +R A+S +GT FMAPEL++E YDEKV V
Sbjct: 13 DRPMEHSPRGRYIRFDIRLGTGAYKSVYKAYDTDQGIDVAWNAIDIGLLPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSKEKNQVVFITEIM---TSGTLKSYIKRVQFIKWKIIKRWCIQILEGLHYLHSQNPPVIHRDLKCDNIFVNGNTGDLRIGDLGLSTQLAVDKRSKAQSVLGTPEFMAPELYDESYDEKVDV 210
BLAST of EWM28995.1 vs. NCBI_GenBank
Match: gi|695415641|ref|XP_009526621.1| (hypothetical protein PHYSODRAFT_502916 [Phytophthora sojae] >gi|348677746|gb|EGZ17563.1| hypothetical protein PHYSODRAFT_502916 [Phytophthora sojae]) HSP 1 Score: 239.195 bits (609), Expect = 1.151e-68 Identity = 103/201 (51.24%), Postives = 155/201 (77.11%), Query Frame = 0
Query: 83 DGVVEHSPQGRYVRFNTRLDACAYKEIWKAFDTSEGVEVAWNTLFLEEVPRSDKKRILNEIRILEKIDHDNIITFYTSWYNRHTKQIVFITELMNNHNNGSLYAFVQPIPILRWRIVKRWLRQILEGLAFLHSQDPPIIHRNINCENIFIIANTGELKIGDLGLST---VSQR--AESCVGTAPFMAPELFEEDYDEKVGV 278
D VEHSP+GRY+RF+ RL AYK ++KA+DT +G++VAWN + + +P ++K RI+ E+++L+K++H NII FY SW+++ Q+VFITE+M +G+L ++++ + ++W+I+KRW QILEGL +LHSQ+PP+IHR++ C+NIF+ NTG+L+IGDLGLST V +R A+S +GT FMAPEL++E YDEKV +
Sbjct: 13 DRPVEHSPRGRYIRFDIRLGMGAYKSVYKAYDTDQGIDVAWNAIDIGLLPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSKEKNQVVFITEIM---TSGTLKSYIKRVQFIKWKIIKRWCIQILEGLHYLHSQNPPVIHRDLKCDNIFVNGNTGDLRIGDLGLSTQLAVDKRSKAQSVLGTPEFMAPELYDESYDEKVDI 210
BLAST of EWM28995.1 vs. NCBI_GenBank
Match: gi|568048493|gb|ETM45541.1| (WNK protein kinase [Phytophthora parasitica]) HSP 1 Score: 239.58 bits (610), Expect = 1.957e-68 Identity = 103/201 (51.24%), Postives = 155/201 (77.11%), Query Frame = 0
Query: 83 DGVVEHSPQGRYVRFNTRLDACAYKEIWKAFDTSEGVEVAWNTLFLEEVPRSDKKRILNEIRILEKIDHDNIITFYTSWYNRHTKQIVFITELMNNHNNGSLYAFVQPIPILRWRIVKRWLRQILEGLAFLHSQDPPIIHRNINCENIFIIANTGELKIGDLGLST---VSQR--AESCVGTAPFMAPELFEEDYDEKVGV 278
D +EHSP+GRY+RF+ RL AYK ++KA+DT +G++VAWN + + +P ++K RI+ E+++L+K++H NII FY SW+++ Q+VFITE+M +G+L ++++ + ++W+I+KRW QILEGL +LHSQ+PP+IHR++ C+NIF+ NTG+L+IGDLGLST V +R A+S +GT FMAPEL++E YDEKV V
Sbjct: 13 DRPMEHSPRGRYIRFDIRLGTGAYKSVYKAYDTDQGIDVAWNAIDIGLLPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSKEKNQVVFITEIM---TSGTLKSYIKRVQFIKWKIIKRWCIQILEGLHYLHSQNPPVIHRDLKCDNIFVNGNTGDLRIGDLGLSTQLAVDKRSKAQSVLGTPEFMAPELYDESYDEKVDV 210
BLAST of EWM28995.1 vs. NCBI_GenBank
Match: gi|567960130|gb|ETK85694.1| (WNK protein kinase [Phytophthora parasitica] >gi|567988853|gb|ETL39123.1| WNK protein kinase [Phytophthora parasitica] >gi|570950311|gb|ETP15568.1| WNK protein kinase [Phytophthora parasitica CJ01A1] >gi|570983888|gb|ETP43631.1| WNK protein kinase [Phytophthora parasitica P10297]) HSP 1 Score: 239.195 bits (609), Expect = 2.078e-68 Identity = 103/201 (51.24%), Postives = 155/201 (77.11%), Query Frame = 0
Query: 83 DGVVEHSPQGRYVRFNTRLDACAYKEIWKAFDTSEGVEVAWNTLFLEEVPRSDKKRILNEIRILEKIDHDNIITFYTSWYNRHTKQIVFITELMNNHNNGSLYAFVQPIPILRWRIVKRWLRQILEGLAFLHSQDPPIIHRNINCENIFIIANTGELKIGDLGLST---VSQR--AESCVGTAPFMAPELFEEDYDEKVGV 278
D +EHSP+GRY+RF+ RL AYK ++KA+DT +G++VAWN + + +P ++K RI+ E+++L+K++H NII FY SW+++ Q+VFITE+M +G+L ++++ + ++W+I+KRW QILEGL +LHSQ+PP+IHR++ C+NIF+ NTG+L+IGDLGLST V +R A+S +GT FMAPEL++E YDEKV V
Sbjct: 13 DRPMEHSPRGRYIRFDIRLGTGAYKSVYKAYDTDQGIDVAWNAIDIGLLPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSKEKNQVVFITEIM---TSGTLKSYIKRVQFIKWKIIKRWCIQILEGLHYLHSQNPPVIHRDLKCDNIFVNGNTGDLRIGDLGLSTQLAVDKRSKAQSVLGTPEFMAPELYDESYDEKVDV 210
BLAST of EWM28995.1 vs. NCBI_GenBank
Match: gi|568018059|gb|ETL92236.1| (WNK protein kinase [Phytophthora parasitica]) HSP 1 Score: 239.195 bits (609), Expect = 2.131e-68 Identity = 103/201 (51.24%), Postives = 155/201 (77.11%), Query Frame = 0
Query: 83 DGVVEHSPQGRYVRFNTRLDACAYKEIWKAFDTSEGVEVAWNTLFLEEVPRSDKKRILNEIRILEKIDHDNIITFYTSWYNRHTKQIVFITELMNNHNNGSLYAFVQPIPILRWRIVKRWLRQILEGLAFLHSQDPPIIHRNINCENIFIIANTGELKIGDLGLST---VSQR--AESCVGTAPFMAPELFEEDYDEKVGV 278
D +EHSP+GRY+RF+ RL AYK ++KA+DT +G++VAWN + + +P ++K RI+ E+++L+K++H NII FY SW+++ Q+VFITE+M +G+L ++++ + ++W+I+KRW QILEGL +LHSQ+PP+IHR++ C+NIF+ NTG+L+IGDLGLST V +R A+S +GT FMAPEL++E YDEKV V
Sbjct: 13 DRPMEHSPRGRYIRFDIRLGTGAYKSVYKAYDTDQGIDVAWNAIDIGLLPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSKEKNQVVFITEIM---TSGTLKSYIKRVQFIKWKIIKRWCIQILEGLHYLHSQNPPVIHRDLKCDNIFVNGNTGDLRIGDLGLSTQLAVDKRSKAQSVLGTPEFMAPELYDESYDEKVDV 210
BLAST of EWM28995.1 vs. NCBI_GenBank
Match: gi|566022834|gb|ETI45745.1| (WNK protein kinase [Phytophthora parasitica P1569]) HSP 1 Score: 239.195 bits (609), Expect = 2.295e-68 Identity = 103/201 (51.24%), Postives = 155/201 (77.11%), Query Frame = 0
Query: 83 DGVVEHSPQGRYVRFNTRLDACAYKEIWKAFDTSEGVEVAWNTLFLEEVPRSDKKRILNEIRILEKIDHDNIITFYTSWYNRHTKQIVFITELMNNHNNGSLYAFVQPIPILRWRIVKRWLRQILEGLAFLHSQDPPIIHRNINCENIFIIANTGELKIGDLGLST---VSQR--AESCVGTAPFMAPELFEEDYDEKVGV 278
D +EHSP+GRY+RF+ RL AYK ++KA+DT +G++VAWN + + +P ++K RI+ E+++L+K++H NII FY SW+++ Q+VFITE+M +G+L ++++ + ++W+I+KRW QILEGL +LHSQ+PP+IHR++ C+NIF+ NTG+L+IGDLGLST V +R A+S +GT FMAPEL++E YDEKV V
Sbjct: 13 DRPMEHSPRGRYIRFDIRLGTGAYKSVYKAYDTDQGIDVAWNAIDIGLLPSTEKTRIIQEVQLLQKLEHKNIINFYGSWFSKEKNQVVFITEIM---TSGTLKSYIKRVQFIKWKIIKRWCIQILEGLHYLHSQNPPVIHRDLKCDNIFVNGNTGDLRIGDLGLSTQLAVDKRSKAQSVLGTPEFMAPELYDESYDEKVDV 210 The following BLAST results are available for this feature:
BLAST of EWM28995.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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