EWM29011.1, cds1662 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29011.1 vs. NCBI_GenBank
Match: gi|585111519|gb|EWM29011.1| (uncharacterized protein Naga_102472g1 [Nannochloropsis gaditana]) HSP 1 Score: 181.415 bits (459), Expect = 5.025e-58 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 Query: 1 MWPSTCQREGRACLDPDYPQHSRRPLMPVDERQDFLLLERIWRFLRAGRLDDAIDLCLRCGQYWRAASISGGDPWEVFVPEEEKRTKA 88 MWPSTCQREGRACLDPDYPQHSRRPLMPVDERQDFLLLERIWRFLRAGRLDDAIDLCLRCGQYWRAASISGGDPWEVFVPEEEKRTKA Sbjct: 1 MWPSTCQREGRACLDPDYPQHSRRPLMPVDERQDFLLLERIWRFLRAGRLDDAIDLCLRCGQYWRAASISGGDPWEVFVPEEEKRTKA 88
BLAST of EWM29011.1 vs. NCBI_GenBank
Match: gi|196009778|ref|XP_002114754.1| (hypothetical protein TRIADDRAFT_28194 [Trichoplax adhaerens] >gi|190582816|gb|EDV22888.1| hypothetical protein TRIADDRAFT_28194, partial [Trichoplax adhaerens]) HSP 1 Score: 67.781 bits (164), Expect = 2.313e-11 Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 0 Query: 14 LDPDYPQHSRRPLMPVDERQDFLLLERIWRFLRAGRLDDAIDLCLRCGQYWRAASISGGDPW 75 +DPD P S PLM +DE D LL+ I+R +RAG++ A ++C+RCGQ WRAA++ G W Sbjct: 73 MDPDAPIRSGLPLMDLDEEDDARLLKHIFRLVRAGQVTKAQEVCIRCGQAWRAATLEGWKMW 134
BLAST of EWM29011.1 vs. NCBI_GenBank
Match: gi|922869377|gb|KOO35516.1| (nuclear pore complex protein nup107 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 67.0106 bits (162), Expect = 4.157e-11 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0 Query: 12 ACLDPDYPQHSRRPLMPVDERQDFLLLERIWRFLRAGRLDDAIDLCLRCGQYWRAASISGGDPWEVFVPEE 82 + LDPD P ++ L P DE LL +W+ +RAG+LDDA LC R GQ+WRAA+++GG+P+ + P E Sbjct: 276 SSLDPDAPFKEKKQLDPEDEAAQAELLRLLWQRVRAGKLDDAQALCRRSGQHWRAATLAGGEPYH-YNPSE 345
BLAST of EWM29011.1 vs. NCBI_GenBank
Match: gi|926771858|ref|XP_013894403.1| (Nuclear pore complex protein [Monoraphidium neglectum] >gi|761962403|gb|KIY95383.1| Nuclear pore complex protein [Monoraphidium neglectum]) HSP 1 Score: 67.0106 bits (162), Expect = 5.193e-11 Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 0 Query: 14 LDPDYPQHSRRPLMPVDERQDFLLLERIWRFLRAGRLDDAIDLCLRCGQYWRAASISGGDPW 75 LDPD P L D+R + L ++W+ +RAG+L A DLC RCGQ WRAA++SGG PW Sbjct: 201 LDPDAPSRGATALRGEDQRNEERLAAQLWQLMRAGKLQQAQDLCRRCGQDWRAAALSGGGPW 262
BLAST of EWM29011.1 vs. NCBI_GenBank
Match: gi|568022164|gb|ETL96242.1| (hypothetical protein L917_06153 [Phytophthora parasitica]) HSP 1 Score: 65.855 bits (159), Expect = 1.191e-10 Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = 0 Query: 10 GRACLDPD-YPQHSRRPLMPVDERQDFLLLERIWRFLRAGRLDDAIDLCLRCGQYWRAASISGGDP 74 G +DPD + ++P D + L++ +W ++RAGR+DDAIDLC+R GQ WRAAS+SGG+P Sbjct: 473 GDVQMDPDAVVRDGDAHILPDDLEDEAELMKALWLYVRAGRMDDAIDLCIRLGQSWRAASLSGGNP 538
BLAST of EWM29011.1 vs. NCBI_GenBank
Match: gi|970648711|gb|KUF88182.1| (Nuclear pore complex protein [Phytophthora nicotianae]) HSP 1 Score: 65.855 bits (159), Expect = 1.213e-10 Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = 0 Query: 10 GRACLDPD-YPQHSRRPLMPVDERQDFLLLERIWRFLRAGRLDDAIDLCLRCGQYWRAASISGGDP 74 G +DPD + ++P D + L++ +W ++RAGR+DDAIDLC+R GQ WRAAS+SGG+P Sbjct: 443 GDVQMDPDAVVRDGDAHILPDDLEDEAELMKALWLYVRAGRMDDAIDLCIRLGQSWRAASLSGGNP 508
BLAST of EWM29011.1 vs. NCBI_GenBank
Match: gi|675166133|ref|XP_008891951.1| (hypothetical protein PPTG_02577 [Phytophthora parasitica INRA-310] >gi|568108097|gb|ETN22721.1| hypothetical protein PPTG_02577 [Phytophthora parasitica INRA-310]) HSP 1 Score: 65.855 bits (159), Expect = 1.214e-10 Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = 0 Query: 10 GRACLDPD-YPQHSRRPLMPVDERQDFLLLERIWRFLRAGRLDDAIDLCLRCGQYWRAASISGGDP 74 G +DPD + ++P D + L++ +W ++RAGR+DDAIDLC+R GQ WRAAS+SGG+P Sbjct: 473 GDVQMDPDAVVRDGDAHILPDDLEDEAELMKALWLYVRAGRMDDAIDLCIRLGQSWRAASLSGGNP 538
BLAST of EWM29011.1 vs. NCBI_GenBank
Match: gi|570330598|gb|ETO78546.1| (hypothetical protein F444_06530 [Phytophthora parasitica P1976]) HSP 1 Score: 65.855 bits (159), Expect = 1.226e-10 Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = 0 Query: 10 GRACLDPD-YPQHSRRPLMPVDERQDFLLLERIWRFLRAGRLDDAIDLCLRCGQYWRAASISGGDP 74 G +DPD + ++P D + L++ +W ++RAGR+DDAIDLC+R GQ WRAAS+SGG+P Sbjct: 473 GDVQMDPDAVVRDGDAHILPDDLEDEAELMKALWLYVRAGRMDDAIDLCIRLGQSWRAASLSGGNP 538
BLAST of EWM29011.1 vs. NCBI_GenBank
Match: gi|567964172|gb|ETK89663.1| (hypothetical protein L915_06346 [Phytophthora parasitica] >gi|567992886|gb|ETL43073.1| hypothetical protein L916_06283 [Phytophthora parasitica] >gi|568052534|gb|ETM49408.1| hypothetical protein L914_06276 [Phytophthora parasitica] >gi|570954286|gb|ETP19543.1| hypothetical protein F441_06474 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 65.855 bits (159), Expect = 1.226e-10 Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = 0 Query: 10 GRACLDPD-YPQHSRRPLMPVDERQDFLLLERIWRFLRAGRLDDAIDLCLRCGQYWRAASISGGDP 74 G +DPD + ++P D + L++ +W ++RAGR+DDAIDLC+R GQ WRAAS+SGG+P Sbjct: 473 GDVQMDPDAVVRDGDAHILPDDLEDEAELMKALWLYVRAGRMDDAIDLCIRLGQSWRAASLSGGNP 538
BLAST of EWM29011.1 vs. NCBI_GenBank
Match: gi|566026709|gb|ETI49620.1| (hypothetical protein F443_06470 [Phytophthora parasitica P1569]) HSP 1 Score: 65.855 bits (159), Expect = 1.226e-10 Identity = 31/66 (46.97%), Postives = 45/66 (68.18%), Query Frame = 0 Query: 10 GRACLDPD-YPQHSRRPLMPVDERQDFLLLERIWRFLRAGRLDDAIDLCLRCGQYWRAASISGGDP 74 G +DPD + ++P D + L++ +W ++RAGR+DDAIDLC+R GQ WRAAS+SGG+P Sbjct: 473 GDVQMDPDAVVRDGDAHILPDDLEDEAELMKALWLYVRAGRMDDAIDLCIRLGQSWRAASLSGGNP 538 The following BLAST results are available for this feature:
BLAST of EWM29011.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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