EWM29043.1, cds1633 (CDS) Nannochloropsis gaditana

Overview
NameEWM29043.1
Unique Namecds1633
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1128390..1129453 -
Alignment locationCM002457.1:1126849..1128010 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29043.1
Productgtp cyclohydrolase ii
Orig transcript idgnl|cribi|Naga_100071g6.7961.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1128390..1129453 -
CM002457.1supercontigCM002457.1:1126849..1128010 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003935GTP cyclohydrolase II activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0009231riboflavin biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000926GTP_CycHdrlaseII_RibA
Homology
BLAST of EWM29043.1 vs. NCBI_GenBank
Match: gi|585111561|gb|EWM29043.1| (gtp cyclohydrolase ii [Nannochloropsis gaditana])

HSP 1 Score: 1494.95 bits (3869), Expect = 0.000e+0
Identity = 741/741 (100.00%), Postives = 741/741 (100.00%), Query Frame = 0
Query:    1 MATGPPIQLAFPSHAFQYTPLVRVRWQKRRRRRVCVHAPFRPGCCRTLPLLISVLFLLLLFAHCTQAFVLAPPGVDRRIVGGRKRLEDCRRRPPSFVGTREGICALGSALADRQQASSNSNGNSISFSNSNNNSNFSASTPGRPSVPLVPTRLVSTSFQPPIQQDIAPGSPGVAEARFVAECDMPTDRGNFRMRSYRCDGDYAALEPVALTHGPLGGAENVLARVHDQCLTSEVFGSKRCDCKEQLGMALDMIREEGGVVIYLQQEGRGIGLANKVAAYALQDEGLDTVDANRHLGFGDDERTYDIVPSILRDLGVESIQLMTNNPLKLECLLKLGVRVSKVVPIVVAPNVFNERYLITKAERMAHTLSPALALQRSLVVPPAPATAGMRGGDSGEKQEKADISREILLSRKRKGVRTWKGVRQPEEGEATGRKEVGPGRTDAGVSSGGREDAGLGEVEHALRSLREGRVVVLLDKTPGAASGATERAPDGENSGSDTHGIGADLVVLAHMASKETLSLFLRTISGVTYCLLPPARLTALWKGSGAAATAAGLDLKDSVLALWEEGRGNEDGSRGSSAARKRAATLRALGGGDGVGEREGAGGVRELSLSDFSSPGHVFVVSPGAAIGTAEDKAMRGLARPSSVSVRREWALEMARWMEEKADSGEWKREGGTAGVSVGVAELVDRETGEGMTVEEVAALVEEHGLAVTSVEKVARFVHERQQQITTEGTVRVEEEEEGRI 741
            MATGPPIQLAFPSHAFQYTPLVRVRWQKRRRRRVCVHAPFRPGCCRTLPLLISVLFLLLLFAHCTQAFVLAPPGVDRRIVGGRKRLEDCRRRPPSFVGTREGICALGSALADRQQASSNSNGNSISFSNSNNNSNFSASTPGRPSVPLVPTRLVSTSFQPPIQQDIAPGSPGVAEARFVAECDMPTDRGNFRMRSYRCDGDYAALEPVALTHGPLGGAENVLARVHDQCLTSEVFGSKRCDCKEQLGMALDMIREEGGVVIYLQQEGRGIGLANKVAAYALQDEGLDTVDANRHLGFGDDERTYDIVPSILRDLGVESIQLMTNNPLKLECLLKLGVRVSKVVPIVVAPNVFNERYLITKAERMAHTLSPALALQRSLVVPPAPATAGMRGGDSGEKQEKADISREILLSRKRKGVRTWKGVRQPEEGEATGRKEVGPGRTDAGVSSGGREDAGLGEVEHALRSLREGRVVVLLDKTPGAASGATERAPDGENSGSDTHGIGADLVVLAHMASKETLSLFLRTISGVTYCLLPPARLTALWKGSGAAATAAGLDLKDSVLALWEEGRGNEDGSRGSSAARKRAATLRALGGGDGVGEREGAGGVRELSLSDFSSPGHVFVVSPGAAIGTAEDKAMRGLARPSSVSVRREWALEMARWMEEKADSGEWKREGGTAGVSVGVAELVDRETGEGMTVEEVAALVEEHGLAVTSVEKVARFVHERQQQITTEGTVRVEEEEEGRI
Sbjct:    1 MATGPPIQLAFPSHAFQYTPLVRVRWQKRRRRRVCVHAPFRPGCCRTLPLLISVLFLLLLFAHCTQAFVLAPPGVDRRIVGGRKRLEDCRRRPPSFVGTREGICALGSALADRQQASSNSNGNSISFSNSNNNSNFSASTPGRPSVPLVPTRLVSTSFQPPIQQDIAPGSPGVAEARFVAECDMPTDRGNFRMRSYRCDGDYAALEPVALTHGPLGGAENVLARVHDQCLTSEVFGSKRCDCKEQLGMALDMIREEGGVVIYLQQEGRGIGLANKVAAYALQDEGLDTVDANRHLGFGDDERTYDIVPSILRDLGVESIQLMTNNPLKLECLLKLGVRVSKVVPIVVAPNVFNERYLITKAERMAHTLSPALALQRSLVVPPAPATAGMRGGDSGEKQEKADISREILLSRKRKGVRTWKGVRQPEEGEATGRKEVGPGRTDAGVSSGGREDAGLGEVEHALRSLREGRVVVLLDKTPGAASGATERAPDGENSGSDTHGIGADLVVLAHMASKETLSLFLRTISGVTYCLLPPARLTALWKGSGAAATAAGLDLKDSVLALWEEGRGNEDGSRGSSAARKRAATLRALGGGDGVGEREGAGGVRELSLSDFSSPGHVFVVSPGAAIGTAEDKAMRGLARPSSVSVRREWALEMARWMEEKADSGEWKREGGTAGVSVGVAELVDRETGEGMTVEEVAALVEEHGLAVTSVEKVARFVHERQQQITTEGTVRVEEEEEGRI 741          
BLAST of EWM29043.1 vs. NCBI_GenBank
Match: gi|551643072|ref|XP_005824331.1| (hypothetical protein GUITHDRAFT_47806, partial [Guillardia theta CCMP2712] >gi|428168406|gb|EKX37351.1| hypothetical protein GUITHDRAFT_47806, partial [Guillardia theta CCMP2712])

HSP 1 Score: 260.766 bits (665), Expect = 4.978e-79
Identity = 120/195 (61.54%), Postives = 148/195 (75.90%), Query Frame = 0
Query:  174 AEARFVAECDMPTDRGNFRMRSYRCDGDYAALEPVALTHGPLGGAENVLARVHDQCLTSEVFGSKRCDCKEQLGMALDMIREEGGVVIYLQQEGRGIGLANKVAAYALQDEGLDTVDANRHLGFGDDERTYDIVPSILRDLGVESIQLMTNNPLKLECLLKLGVRVSKVVPIVVAPNVFNERYLITKAERMAHTL 368
             +  F+AEC MPTDRG FR+RSYR  G    +EPV +  G L G E V+ RVHDQC TSEV GSKRCDCKEQL MAL+ I +  G +IY+ QEGRGIGLANK+AAY LQD GLDTVDANRHLGF DDER+YD VP+IL D+G+ S+QL+TNNP K++ L  +GV++ +  P +V PN +N +YL TKA RM+H+L
Sbjct:    1 GKTEFIAECHMPTDRGMFRLRSYRYRGA-KIMEPVVMVSGDLRGKEGVVVRVHDQCFTSEVLGSKRCDCKEQLDMALNYINQNSGAIIYMPQEGRGIGLANKIAAYQLQDNGLDTVDANRHLGFEDDERSYDCVPAILEDMGILSVQLVTNNPYKIQQLTDVGVKIDRTKPSLVEPNTYNVKYLRTKAARMSHSL 194          
BLAST of EWM29043.1 vs. NCBI_GenBank
Match: gi|299469821|emb|CBN76675.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 274.248 bits (700), Expect = 5.679e-79
Identity = 206/562 (36.65%), Postives = 276/562 (49.11%), Query Frame = 0
Query:  177 RFVAECDMPTDRGNFRMRSYRCDGDYAALEPVALTHGPLGGAENVLARVHDQCLTSEVFGSKRCDCKEQLGMALDMIREEGGVVIYLQQEGRGIGLANKVAAYALQDEGLDTVDANRHLGFGDDERTYDIVPSILRDLGVESIQLMTNNPLKLECLLKLGVRVSKVVPIVVAPNVFNERYLITKAERMAHTL-----------SPALALQRSLVVPPAPATAGMRGGDSGEKQEKADISREILLSRKRKGVRTWKGVRQPEEGEATGRKEVGPGRTDAGVSSGGREDAGLGEVEHALRSLREGRVVVLLDKTPGAASGATERAPDGENSGSDTHGIGADLVVLAHMASKETLSLFLRTISGVTYCLLPPARLTALWKGSGAAATAAGLDLKDSVLALWEEGRGNEDGSRGSSAARKRAATLRALGGGDGVGEREGAGGVRELSLSDFSSPGHVFVV--SPGAAIGTAEDKAMRGLARPSSVSVRREWALEMARWMEEKADSGEWKREGGTAGVS-VGVAELVDRETGEGMT-VEEVAALVEEHGLAVTSVEKVARFVHERQQ 723
            ++V+EC +PT RG FR+RSYR +G+  ++EPV +  G L   E V  RVHDQCLTSEV GS RCDCKEQL +ALD I E GG VIY+QQEGRGIGLANKVAAYALQD GLDTVDANRHLGF DD R+Y+ V  IL D+G++SI+LMTNNP KL+CL  +G++V   +P++VAPNV +  YL  KA RM+H L           SP+      + +P     A +RGG+S    E                          EEG A GR  V                        A+ ++R G+ VV+ D                 + G +  G   DLV  A  A+++ L+  +R  SGV    L   RL  L             D K +  A+  + +    G+    +A  RA TLRAL   +  G R            DF+ PGH+F +  +PG  +        RG           E A+++A                  AG+S VGV   +  + G+ M  V E+     EHGL +TS++ +   + ERQ+
Sbjct:  146 QYVSECLLPTPRGKFRLRSYRHEGNGRSMEPVVMVAGDLQDLEGVPVRVHDQCLTSEVLGSLRCDCKEQLELALDYISEHGGCVIYMQQEGRGIGLANKVAAYALQDGGLDTVDANRHLGFDDDLRSYEAVEHILADMGIKSIKLMTNNPFKLKCLKSMGIKVLSRIPMLVAPNVHSLAYLRAKAHRMSHVLHQLDDVEILGESPSDGATAPVALPLDEVGA-IRGGESTRGSE----------------------AEPDEEGYAFGRDSVLA----------------------AIEAVRSGKCVVVTD-----------------DEGRENEG---DLVFAAEKATEDLLAFTIRHTSGVICASLGARRLQELRL---PQMVENNEDPKMTAFAITVDAKF---GTSTGISAGDRATTLRALADPE-AGPR------------DFNRPGHIFPLRYTPGGVL-------ERG--------GHTEAAVDLATL----------------AGLSPVGVLCEITTKDGKDMARVPELKEFCAEHGLVLTSIQDMRCLIRERQR 592          
BLAST of EWM29043.1 vs. NCBI_GenBank
Match: gi|873219153|emb|CEM38204.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 253.832 bits (647), Expect = 1.170e-69
Identity = 118/200 (59.00%), Postives = 150/200 (75.00%), Query Frame = 0
Query:  169 GSPGVAEARFVAECDMPTDRGNFRMRSYRCDGDYAALEPVALTHGPLGGAENVLARVHDQCLTSEVFGSKRCDCKEQLGMALDMIREEGGVVIYLQQEGRGIGLANKVAAYALQDEGLDTVDANRHLGFGDDERTYDIVPSILRDLGVESIQLMTNNPLKLECLLKLGVRVSKVVPIVVAPNVFNERYLITKAERMAHTL 368
            G P +   +FV+EC+MPTD G FR+RSY+        + V + +G L G  +V  RVHDQC+TSE  GSKRCDCK+QL MA++ +    G VIYLQQEGRGIGLANK+AAYALQD G+DTVDANRHLGF DD R+Y+ VP ILRD+GVESI LMTNNP K++ L++LGV +  ++P+ V+PN FN +YL TK++RM H L
Sbjct:  180 GGPKIY-TKFVSECEMPTDHGVFRLRSYQHIAPDKQFDIVVMINGDLKGGMDVPVRVHDQCMTSEALGSKRCDCKDQLDMAMEYVGRNNGAVIYLQQEGRGIGLANKIAAYALQDRGMDTVDANRHLGFEDDTRSYESVPFILRDIGVESIVLMTNNPRKVKHLIQLGVNIEGIIPLRVSPNDFNRKYLETKSQRMMHVL 378          
BLAST of EWM29043.1 vs. NCBI_GenBank
Match: gi|299473629|emb|CBN78023.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 236.113 bits (601), Expect = 7.270e-68
Identity = 114/193 (59.07%), Postives = 142/193 (73.58%), Query Frame = 0
Query:  178 FVAECDMPTDRGNFRMRSYRCDGDYAALEPVALTHGPLGGAENVLARVHDQCLTSEVFGSKRCDCKEQLGMALDMIREEGG-VVIYLQQEGRGIGLANKVAAYALQDEGLDTVDANRHLGFGDDERTYDIVPSILRDLGVESIQLMTNNPLKLECLLKLGVRVSKVVPIVVAPNVFNERYLITKAERMAHTLS 369
            FV+EC +PT++GNFR+R+YR        EPV +  G + G ENV  RVHDQC TSEV GSKRCDC+EQL ++L  I+E GG  VIYL QEGRGIGLANKVAAYALQD+GLDTV+ANR LGFGDDER+Y+ V  IL D+ ++S+QLMTNNP K++ L   GV+V   +P+ V  N  N  YL  KA RM+H ++
Sbjct:  130 FVSECSLPTEKGNFRLRAYRYADGVKTHEPVVMVAGNVRGRENVPVRVHDQCQTSEVLGSKRCDCREQLDLSLRYIQEHGGGAVIYLAQEGRGIGLANKVAAYALQDDGLDTVEANRQLGFGDDERSYECVEFILGDMEIKSVQLMTNNPFKIDWLRATGVKVEGRIPVEVPANEHNHGYLEAKASRMSHLIN 322          
BLAST of EWM29043.1 vs. NCBI_GenBank
Match: gi|397585695|gb|EJK53363.1| (hypothetical protein THAOC_27219 [Thalassiosira oceanica])

HSP 1 Score: 244.588 bits (623), Expect = 8.920e-68
Identity = 176/484 (36.36%), Postives = 234/484 (48.35%), Query Frame = 0
Query:  178 FVAECDMPTDRGNFRMRSYRCDGDYAAL--------------EPVALTH----------GPLGGAENVLARVHDQCLTSEVFGSKRCDCKEQLGMALDMIREEGGVVIYLQQEGRGIGLANKVAAYALQDEGLDTVDANRHLGFGDDERTYDIVPSILRDLGVESIQLMTNNPLKLECLLKLGVRVSKVVPIVV-APNVFNERYLITKAERMAHT-------LSPALALQ----------RSLVVPPAPATAGMRGGDSGEKQEKADISREILLSRKRKGVRTWKGVRQPEEGEATGRKEVGPGRTDAGVSSGGREDAGLGEVEHALRSLREGRVVVLLDKTPGAASGATERAPDGENSGSDTHGIGADLVVLAHMASKETLSLFLRTISGVTYCLLPPARLTALWKGSGAAATAAGLDLKDSVLALWEEGRGNEDGSRGSSAARKRAATLRALGGGDGVGEREGAGGVRELSLSDFSSPGHVF 619
            FVAE ++PTD G+FR+R+YR +    AL              EP  +            G  GGA+ V  R+HDQC TSEVF S+RCDCKEQL MAL  IRE GG +IYLQQEGRGIGLANK+AAY+LQD GLDTVDAN HLGF +D RTY +VPSIL+D+G++SIQLMTNNP K+E L  LGV V   VP+VV   N +N++YL TK +RM H         SP   +           R   VPP    A     D GE+     ++  ++    + GV         ++G   GRK                       VE A+ ++  G ++V++D                EN G        D ++ A + + E ++ F+R  SGV    +   R+  L      A      D K++  ++  +    E G     +AR R  T + L  GD                SDF  PGH+F
Sbjct:  125 FVAETNLPTDIGHFRLRAYRVEEFEQALASSNPLGPGAGLGPEPCVIFASDKPPFGNRGGERGGAKAVPIRIHDQCFTSEVFRSRRCDCKEQLNMALSYIRENGGAIIYLQQEGRGIGLANKIAAYSLQDVGLDTVDANTHLGFPEDCRTYGVVPSILKDMGIDSIQLMTNNPRKVERLSSLGVDVVGTVPMVVPTANPYNKKYLETKQKRMRHANFGSMLEASPNAIMSADDSHVEFMLREANVPPEEPLAEEYIND-GEEMAANAVTVALMDDPYQSGVVAS------DDGYCFGRK----------------------SVEEAIAAVARGELIVVVDDE------------SRENEG--------DFIMAADLCTPEKMAEFIRYSSGVICIGMEGHRMDELEL---PAMVVDNEDPKETAFSVTVDAT-EEHGITTGISARDRCITSKMLANGDA-------------KASDFHRPGHIF 542          
BLAST of EWM29043.1 vs. NCBI_GenBank
Match: gi|551661245|ref|XP_005833389.1| (hypothetical protein GUITHDRAFT_86681 [Guillardia theta CCMP2712] >gi|428177530|gb|EKX46409.1| hypothetical protein GUITHDRAFT_86681 [Guillardia theta CCMP2712])

HSP 1 Score: 235.728 bits (600), Expect = 2.155e-67
Identity = 115/199 (57.79%), Postives = 141/199 (70.85%), Query Frame = 0
Query:  176 ARFVAECDMPTDRGNFRMRSYRCDG------------DYAALEPVALTHGPLGGAENVLARVHDQCLTSEVFGSKRCDCKEQLGMALDMIREEGGVVIYLQQEGRGIGLANKVAAYALQDEGLDTVDANRHL-GFGDDERTYDIVPSILRDLGVESIQLMTNNPLKLECLLKLGVRVSKVVPIVVAPNVFNERYLITKA 361
             +F+AEC++PTDRG FRMR+YR  G            ++  +EPV +        + V  RVHDQC TSEV GSKRCDCKEQL +ALD I + GG +IY+ QEGRGIGLANKVAAY LQD GLDTVDANR L GFGDDER+Y+ +P IL D+G++SIQLMTNNP K+  L +LGV ++   P VV PNV+NE+YL  K 
Sbjct:  137 TKFIAECELPTDRGVFRMRAYRYKGAKVVIREGERVLEWTEMEPVVIYKQAKKFVDPVAVRVHDQCYTSEVLGSKRCDCKEQLDLALDYINQFGGALIYMPQEGRGIGLANKVAAYHLQDGGLDTVDANRQLAGFGDDERSYECIPYILEDMGIKSIQLMTNNPFKIRQLSELGVTIAGTKPHVVKPNVYNEKYLRAKV 335          
BLAST of EWM29043.1 vs. NCBI_GenBank
Match: gi|1214693075|gb|OWZ07505.1| (GTP cyclohydrolase II [Phytophthora megakarya])

HSP 1 Score: 232.261 bits (591), Expect = 3.056e-67
Identity = 117/217 (53.92%), Postives = 151/217 (69.59%), Query Frame = 0
Query:  160 PPIQQDIAPGSPGVAE---ARFVAECDMPTDRGNFRMRSYRCDGDYAALEPVALTHGPLGGAENVLARVHDQCLTSEVFGSKRCDCKEQLGMALDMIREEGGVVIYLQQEGRGIGLANKVAAYALQDEGLDTVDANRHLGFGDDERTYDIVPSILRDLGVESIQLMTNNPLKLECLLKLGVRVSKVVPIVVAPNVFNERYLITKAERMAHTLSPALA 373
            PP+  D APG   + E     FVAE  +PTD G FR+R+YR  G     EP+A+  G + G  NV  RVHDQC TSEVFGS +CDC+EQL  A    ++ GGVVIY+ QEGRGIGLANK+ AY++Q+ GLDTVDANR LGF DD R+Y+ VP+IL+DLG++SI+L+TNNP K+  L +LG+ V   +P+V+    F++ YL  KA+RMAH L  A A
Sbjct:   13 PPVGAD-APGLTCLGEQITTTFVAETVLPTDGGMFRVRAYRSVGSLRESEPIAMITGDVRGKRNVPVRVHDQCFTSEVFGSLKCDCREQLDFAKAYTKQHGGVVIYMPQEGRGIGLANKIMAYSMQERGLDTVDANRVLGFKDDYRSYEPVPAILKDLGIQSIRLLTNNPRKIRLLSQLGITVEGRLPVVIKGGEFSQGYLTAKAKRMAHLLPGAPA 228          
BLAST of EWM29043.1 vs. NCBI_GenBank
Match: gi|675168913|ref|XP_008893341.1| (GTP cyclohydrolase II [Phytophthora parasitica INRA-310] >gi|567959489|gb|ETK85060.1| GTP cyclohydrolase II [Phytophthora parasitica] >gi|567988201|gb|ETL38482.1| GTP cyclohydrolase II [Phytophthora parasitica] >gi|568017425|gb|ETL91602.1| GTP cyclohydrolase II [Phytophthora parasitica] >gi|568047828|gb|ETM44896.1| GTP cyclohydrolase II [Phytophthora parasitica] >gi|568106930|gb|ETN21560.1| GTP cyclohydrolase II [Phytophthora parasitica INRA-310] >gi|570325800|gb|ETO73748.1| GTP cyclohydrolase II [Phytophthora parasitica P1976] >gi|570949645|gb|ETP14902.1| GTP cyclohydrolase II [Phytophthora parasitica CJ01A1] >gi|570983072|gb|ETP42970.1| GTP cyclohydrolase II [Phytophthora parasitica P10297] >gi|970636050|gb|KUF80788.1| GTP cyclohydrolase-2 [Phytophthora nicotianae] >gi|970650136|gb|KUF89238.1| hypothetical protein AM588_10003040 [Phytophthora nicotianae] >gi|970652089|gb|KUF90813.1| GTP cyclohydrolase-2 [Phytophthora nicotianae])

HSP 1 Score: 229.18 bits (583), Expect = 7.189e-66
Identity = 117/230 (50.87%), Postives = 157/230 (68.26%), Query Frame = 0
Query:  143 RPSVPLVPTRLVSTSFQP-PIQQDIAPGSPGVAE---ARFVAECDMPTDRGNFRMRSYRCDGDYAALEPVALTHGPLGGAENVLARVHDQCLTSEVFGSKRCDCKEQLGMALDMIREEGGVVIYLQQEGRGIGLANKVAAYALQDEGLDTVDANRHLGFGDDERTYDIVPSILRDLGVESIQLMTNNPLKLECLLKLGVRVSKVVPIVVAPNVFNERYLITKAERMAHTL 368
            +P  P+V    ++ SF+  P+    APG   + +     FVAE  +PTD G FR+R+YR  G     EP+A+  G + G  NV  RVHDQC TSEVFGS +CDC+EQL  A    ++ GGVVIY+ QEGRGIGLANK+ AY++Q+ GLDTVDANR LGF DD R+Y+ VP+IL+DLGV+SI+L+TNNP K+  L +LG+ V   +P+V+    F++ YL  KA+RM+H L
Sbjct:    6 KPQKPVVD---IAQSFKHVPVLDADAPGLTCLGDQVTTTFVAETALPTDGGMFRVRAYRSVGSLRESEPIAMITGDVRGKRNVPVRVHDQCFTSEVFGSLKCDCREQLDYAKAYTKQHGGVVIYMPQEGRGIGLANKIMAYSMQERGLDTVDANRVLGFKDDYRSYEPVPAILKDLGVQSIRLLTNNPRKIRLLSQLGITVEGRLPVVIKGGEFSQGYLTAKAKRMSHLL 232          
BLAST of EWM29043.1 vs. NCBI_GenBank
Match: gi|695433268|ref|XP_009531139.1| (hypothetical protein PHYSODRAFT_355010 [Phytophthora sojae] >gi|348673891|gb|EGZ13710.1| hypothetical protein PHYSODRAFT_355010 [Phytophthora sojae])

HSP 1 Score: 228.409 bits (581), Expect = 1.247e-65
Identity = 113/205 (55.12%), Postives = 145/205 (70.73%), Query Frame = 0
Query:  167 APGSPGVAE---ARFVAECDMPTDRGNFRMRSYRCDGDYAALEPVALTHGPLGGAENVLARVHDQCLTSEVFGSKRCDCKEQLGMALDMIREEGGVVIYLQQEGRGIGLANKVAAYALQDEGLDTVDANRHLGFGDDERTYDIVPSILRDLGVESIQLMTNNPLKLECLLKLGVRVSKVVPIVVAPNVFNERYLITKAERMAHTL 368
            APG   + E     FVAE  +PTD G FR+R+YR  G     EPVA+  G + G  NV  RVHDQC TSEVFGS +CDC+EQL  A    ++ GGVVIY+ QEGRGIGLANK+ AY++Q+ GLDTVDANR LGF DD R+Y+ VP+IL+DLGV+SI+L+TNNP K+  L +LG+ V   +P+V+    F++ YL  KA+RM+H L
Sbjct:   27 APGLTCLGERVTTTFVAETALPTDGGLFRVRAYRSVGSLRESEPVAMITGDVRGKRNVPVRVHDQCFTSEVFGSLKCDCREQLDYAKAYTKQHGGVVIYMPQEGRGIGLANKIMAYSMQERGLDTVDANRVLGFKDDYRSYEPVPAILKDLGVQSIRLLTNNPRKIRLLSQLGITVEGRLPVVIKGGEFSQGYLTAKAKRMSHLL 231          
The following BLAST results are available for this feature:
BLAST of EWM29043.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111561|gb|EWM29043.1|0.000e+0100.00gtp cyclohydrolase ii [Nannochloropsis gaditana][more]
gi|551643072|ref|XP_005824331.1|4.978e-7961.54hypothetical protein GUITHDRAFT_47806, partial [Gu... [more]
gi|299469821|emb|CBN76675.1|5.679e-7936.65conserved unknown protein [Ectocarpus siliculosus][more]
gi|873219153|emb|CEM38204.1|1.170e-6959.00unnamed protein product [Vitrella brassicaformis C... [more]
gi|299473629|emb|CBN78023.1|7.270e-6859.07conserved unknown protein [Ectocarpus siliculosus][more]
gi|397585695|gb|EJK53363.1|8.920e-6836.36hypothetical protein THAOC_27219 [Thalassiosira oc... [more]
gi|551661245|ref|XP_005833389.1|2.155e-6757.79hypothetical protein GUITHDRAFT_86681 [Guillardia ... [more]
gi|1214693075|gb|OWZ07505.1|3.056e-6753.92GTP cyclohydrolase II [Phytophthora megakarya][more]
gi|675168913|ref|XP_008893341.1|7.189e-6650.87GTP cyclohydrolase II [Phytophthora parasitica INR... [more]
gi|695433268|ref|XP_009531139.1|1.247e-6555.12hypothetical protein PHYSODRAFT_355010 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1637rna1637Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications