EWM29030.1, cds1632 (CDS) Nannochloropsis gaditana

Overview
NameEWM29030.1
Unique Namecds1632
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1122757..1125182 +
Alignment locationCM002457.1:1125339..1126521 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29030.1
Productdna-directed rna polymerase ii subunit rpb2
Orig transcript idgnl|cribi|Naga_100071g5.7948.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1122757..1125182 +
CM002457.1supercontigCM002457.1:1125339..1126521 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0032549ribonucleoside binding
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: INTERPRO
TermDefinition
IPR007121RNA_pol_bsu_CS
IPR015712DNA-dir_RNA_pol_su2
IPR007644RNA_pol_bsu_protrusion
IPR007645RNA_pol_Rpb2_3
IPR007642RNA_pol_Rpb2_2
IPR007641RNA_pol_Rpb2_7
IPR007120DNA-dir_RNA_pol_su2_6
IPR007646RNA_pol_Rpb2_4
IPR007647RNA_pol_Rpb2_5
IPR014724RNA_pol_RPB2_OB-fold
Homology
BLAST of EWM29030.1 vs. NCBI_GenBank
Match: gi|585111548|gb|EWM29030.1| (dna-directed rna polymerase ii subunit rpb2 [Nannochloropsis gaditana])

HSP 1 Score: 2505.32 bits (6492), Expect = 0.000e+0
Identity = 1202/1202 (100.00%), Postives = 1202/1202 (100.00%), Query Frame = 0
Query:    1 MDDFDDDFDDLDETTSATSGAGGDTTGDEGEGSLGMGGEAEEISQDDAWVVISAFFDEKGLVRQQLDSYDSFLEVGLQECVDDAGDIVVTSEPQYGPGAEEQDLLKRYKISFGQVYMSSPNFPEADRETHLLWPADARIRNLTYGCNLYTDVTVRVVQLDERGNETEEQREWEYEQEHLGRMPLMILSRYCVLAKASGRELMEQNECIYDQGGYFIINGSEKVIIAQERMSNNDVYCFRRKQPHKYSWVCETRSNQVKGSRSTSTMYLQIYAPGRQKANCINANIAHIREEIPVVVVFRALGFVTDKDILSHIVYDLRDEEMLDRFRASLEEAEVIKERNLALDFIGKRGSIENAGRAKRIQYAKLILQKEMLPHVGTEENVETRKAFFLGYTVHKMLMCSLGRAEEDDRDHYGKKRLDLAGVLIRGLFHQLFLRLCKDVRRYIRSCLNEAKNFNITQAIKSRIITDGLKYSLATGNWGDRLTATRAGVSQVLNRLTYAASLSHLRRLNTPLGREGKQAKPRQLHNSHWGMVCPAETPEGHAVGLVKNLALMAYISKESPSVPILEVLTEYGTEGLDETLPSEIALPTVTRIFCNGNWVGIHRKPMVLMKNLLDTRRNNDIPPDVSIINAISEQELRIYTDAGRVLRPLFVVESGGKRLKIKKRHIRQLAPMKDYTFTNLLQDGLVEYIDTEEEETCMVAMDPGDLTLEGSPRTYTHCEIHPSMILGVVASVIPFPDHNQSPRNTYQSAMGKQAMGVYTSAYQNRMDTMAHVLHYPQRPLVTTKAMEYLKFRELPSGTNAVVAIMIYSGYNQEDSLIMNQSAIDRGFFRSSFYRCYQDEEKGRGAGGSLLSSETFEIPTRDTTEGMRFGSYEGLDEDGLCPPGVRVNGGDILIGKTSPIMSSGADGTVNRLSKKDGSTSMRTQESGIVDRVVLTTNEKGFKFVKVRIRNVRIPQIGDKFSSRHGQKGTIGMTYRQEDMPFTQQGITPDIIVNPHAIPSRMTIGQLVECLTGKVSSLAGSEGDGTAFNTSLTVDNVARVLHSLGYQRHGNETLHSGMTGRQLTAKIFIGPTFYQRLKHLVDDKIHSRARGPVAMLTRQPLEGRGRDGGLRMGEMERDCLISHGAAAFIRDRLFLNSDPYRVHVCDVCGLIAKANLRTGDFMCLSCKEKNRISQIFMPYACKLLFQELMSMCIAPRMFTSTKGR 1202
            MDDFDDDFDDLDETTSATSGAGGDTTGDEGEGSLGMGGEAEEISQDDAWVVISAFFDEKGLVRQQLDSYDSFLEVGLQECVDDAGDIVVTSEPQYGPGAEEQDLLKRYKISFGQVYMSSPNFPEADRETHLLWPADARIRNLTYGCNLYTDVTVRVVQLDERGNETEEQREWEYEQEHLGRMPLMILSRYCVLAKASGRELMEQNECIYDQGGYFIINGSEKVIIAQERMSNNDVYCFRRKQPHKYSWVCETRSNQVKGSRSTSTMYLQIYAPGRQKANCINANIAHIREEIPVVVVFRALGFVTDKDILSHIVYDLRDEEMLDRFRASLEEAEVIKERNLALDFIGKRGSIENAGRAKRIQYAKLILQKEMLPHVGTEENVETRKAFFLGYTVHKMLMCSLGRAEEDDRDHYGKKRLDLAGVLIRGLFHQLFLRLCKDVRRYIRSCLNEAKNFNITQAIKSRIITDGLKYSLATGNWGDRLTATRAGVSQVLNRLTYAASLSHLRRLNTPLGREGKQAKPRQLHNSHWGMVCPAETPEGHAVGLVKNLALMAYISKESPSVPILEVLTEYGTEGLDETLPSEIALPTVTRIFCNGNWVGIHRKPMVLMKNLLDTRRNNDIPPDVSIINAISEQELRIYTDAGRVLRPLFVVESGGKRLKIKKRHIRQLAPMKDYTFTNLLQDGLVEYIDTEEEETCMVAMDPGDLTLEGSPRTYTHCEIHPSMILGVVASVIPFPDHNQSPRNTYQSAMGKQAMGVYTSAYQNRMDTMAHVLHYPQRPLVTTKAMEYLKFRELPSGTNAVVAIMIYSGYNQEDSLIMNQSAIDRGFFRSSFYRCYQDEEKGRGAGGSLLSSETFEIPTRDTTEGMRFGSYEGLDEDGLCPPGVRVNGGDILIGKTSPIMSSGADGTVNRLSKKDGSTSMRTQESGIVDRVVLTTNEKGFKFVKVRIRNVRIPQIGDKFSSRHGQKGTIGMTYRQEDMPFTQQGITPDIIVNPHAIPSRMTIGQLVECLTGKVSSLAGSEGDGTAFNTSLTVDNVARVLHSLGYQRHGNETLHSGMTGRQLTAKIFIGPTFYQRLKHLVDDKIHSRARGPVAMLTRQPLEGRGRDGGLRMGEMERDCLISHGAAAFIRDRLFLNSDPYRVHVCDVCGLIAKANLRTGDFMCLSCKEKNRISQIFMPYACKLLFQELMSMCIAPRMFTSTKGR
Sbjct:    1 MDDFDDDFDDLDETTSATSGAGGDTTGDEGEGSLGMGGEAEEISQDDAWVVISAFFDEKGLVRQQLDSYDSFLEVGLQECVDDAGDIVVTSEPQYGPGAEEQDLLKRYKISFGQVYMSSPNFPEADRETHLLWPADARIRNLTYGCNLYTDVTVRVVQLDERGNETEEQREWEYEQEHLGRMPLMILSRYCVLAKASGRELMEQNECIYDQGGYFIINGSEKVIIAQERMSNNDVYCFRRKQPHKYSWVCETRSNQVKGSRSTSTMYLQIYAPGRQKANCINANIAHIREEIPVVVVFRALGFVTDKDILSHIVYDLRDEEMLDRFRASLEEAEVIKERNLALDFIGKRGSIENAGRAKRIQYAKLILQKEMLPHVGTEENVETRKAFFLGYTVHKMLMCSLGRAEEDDRDHYGKKRLDLAGVLIRGLFHQLFLRLCKDVRRYIRSCLNEAKNFNITQAIKSRIITDGLKYSLATGNWGDRLTATRAGVSQVLNRLTYAASLSHLRRLNTPLGREGKQAKPRQLHNSHWGMVCPAETPEGHAVGLVKNLALMAYISKESPSVPILEVLTEYGTEGLDETLPSEIALPTVTRIFCNGNWVGIHRKPMVLMKNLLDTRRNNDIPPDVSIINAISEQELRIYTDAGRVLRPLFVVESGGKRLKIKKRHIRQLAPMKDYTFTNLLQDGLVEYIDTEEEETCMVAMDPGDLTLEGSPRTYTHCEIHPSMILGVVASVIPFPDHNQSPRNTYQSAMGKQAMGVYTSAYQNRMDTMAHVLHYPQRPLVTTKAMEYLKFRELPSGTNAVVAIMIYSGYNQEDSLIMNQSAIDRGFFRSSFYRCYQDEEKGRGAGGSLLSSETFEIPTRDTTEGMRFGSYEGLDEDGLCPPGVRVNGGDILIGKTSPIMSSGADGTVNRLSKKDGSTSMRTQESGIVDRVVLTTNEKGFKFVKVRIRNVRIPQIGDKFSSRHGQKGTIGMTYRQEDMPFTQQGITPDIIVNPHAIPSRMTIGQLVECLTGKVSSLAGSEGDGTAFNTSLTVDNVARVLHSLGYQRHGNETLHSGMTGRQLTAKIFIGPTFYQRLKHLVDDKIHSRARGPVAMLTRQPLEGRGRDGGLRMGEMERDCLISHGAAAFIRDRLFLNSDPYRVHVCDVCGLIAKANLRTGDFMCLSCKEKNRISQIFMPYACKLLFQELMSMCIAPRMFTSTKGR 1202          
BLAST of EWM29030.1 vs. NCBI_GenBank
Match: gi|813157781|ref|XP_012202239.1| (DNA-directed RNA polymerase II subunit RPB2 [Saprolegnia parasitica CBS 223.65] >gi|641533149|gb|KDO27151.1| DNA-directed RNA polymerase II subunit RPB2 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 1553.88 bits (4022), Expect = 0.000e+0
Identity = 746/1169 (63.82%), Postives = 914/1169 (78.19%), Query Frame = 0
Query:   43 ISQDDAWVVISAFFDEKGLVRQQLDSYDSFLEVGLQECVDDAGDIVVTSEPQYGPGAEEQDLLKR-YKISFGQVYMSSPNFPEADRETHLLWPADARIRNLTYGCNLYTDVTVRVVQLDERGNETEEQREWEYE-QEHLGRMPLMILSRYCVLAKASGRELMEQNECIYDQGGYFIINGSEKVIIAQERMSNNDVYCFRRKQPHKYSWVCETRSNQVKGSRSTSTMYLQIYAPGRQKANC----INANIAHIREEIPVVVVFRALGFVTDKDILSHIVYDLRDEEMLDRFRASLEEAEVIKERNLALDFIGKRGSIENAGRAKRIQYAKLILQKEMLPHVGTEENVETRKAFFLGYTVHKMLMCSLGRAEEDDRDHYGKKRLDLAGVLIRGLFHQLFLRLCKDVRRYIRSCLNEAKNFNITQAIKSRIITDGLKYSLATGNWGDRLTATRAGVSQVLNRLTYAASLSHLRRLNTPLGREGKQAKPRQLHNSHWGMVCPAETPEGHAVGLVKNLALMAYISKESPSVPILEVLTEYGTEGLDETLPSEIALPTVTRIFCNGNWVGIHRKPMVLMKNLLDTRRNNDIPPDVSIINAISEQELRIYTDAGRVLRPLFVVESGGKRLKIKKRHIRQLAPMK--DYTFTNLLQDGLVEYIDTEEEETCMVAMDPGDLTLEGSPRT-YTHCEIHPSMILGVVASVIPFPDHNQSPRNTYQSAMGKQAMGVYTSAYQNRMDTMAHVLHYPQRPLVTTKAMEYLKFRELPSGTNAVVAIMIYSGYNQEDSLIMNQSAIDRGFFRSSFYRCYQDEEK-----GRGAGGSLLSSETFEIPTRDTTEGMRFGSYEGLDEDGLCPPGVRVNGGDILIGKTSPIMSSGADGTVNRLSKKDGSTSMRTQESGIVDRVVLTTNEKGFKFVKVRIRNVRIPQIGDKFSSRHGQKGTIGMTYRQEDMPFTQQGITPDIIVNPHAIPSRMTIGQLVECLTGKVSSLAGSEGDGTAFNTSLTVDNVARVLHSLGYQRHGNETLHSGMTGRQLTAKIFIGPTFYQRLKHLVDDKIHSRARGPVAMLTRQPLEGRGRDGGLRMGEMERDCLISHGAAAFIRDRLFLNSDPYRVHVCDVCGLIAKANLRTGDFMCLSCKEKNRISQIFMPYACKLLFQELMSMCIAPRMFT 1197
            +SQ+DAW VISA+F+EKGLVRQQLDS+D F++  +QE +DD+  I +T E QY PG +   +    Y+I FGQ+Y+S P   E+D  T +++P +AR+RNLTY   LY DVT    Q      E ++  E E+  +E +G +P+M+ S+YCVL   + +EL E NEC+YDQGGYFIINGSEKV+IAQERMSNN VYCF++    KYSWVCETRS+   G R TSTMY+Q+Y     K+      I A I +IR++IPVV++FRALGFV D++IL HI YD  D E+++RF+ SLEEA VI+E+ +ALDFIG+RGS  N  +A R++YA+ ILQKEMLPHVG E++ ET+KA+FLGY VHK+LMCSLGR  EDDRDHYG KRLDLAG L+ GLF  LF +L KDV+ Y++ C++  ++F ++ AIKS+ I++GL+YSLATGNWG + TA++AGVSQVLNRLTYA+SLSHLRRLNTPLGREGKQAKPRQLHN+HWGM+CPAETPEG AVGLVKNLALMAYIS  SP  PILE L E+ TE L+E  P  I  PT T+IF NGNWVG+HR+P  L+K L   RR  DI  +VS+I  + ++ELRIYTDAGRV RPLF+VE    +L ++K H+ +L   K  ++ + NLL +G+VE IDTEEEE CM+AM+P DL     PR  YTHCEIHPSMILG+ AS+IPFPDHNQSPRNTYQSAMGKQAMG+YTS ++ RMDTMA++L+YPQ+PLVTT+AMEYL FRELPSG NA+VAI  Y+GYNQEDSLIMNQSAIDRG FRS+FYRCY D+E+     G G G   L+ E FE P+R T   ++ GSY  LD DGL  PG RV+G DI+IGKTSP+ +S  +G   R  K+D ST++RT E+GI+D V+LTTN +GFKF KVR RN+RIPQIGDKF+SRHGQKGTIGMTYRQEDMPFT +G+ PDIIVNPHAIPSRMTIG L+ECL GKVSS  G EGD T F T +TV  ++  LHSLGYQRHGNE L++G TGR+L A+IFIGPTFYQRLKH+VDDKIHSR+RGPV MLTRQPLEGR R+GGLRMGEMERDCLISHG+A F+ DRLF NSD YRVHVCD+CG+IA ANLR   F C +C+ K +ISQ+ +PY+CKLLFQELM+M IAPR+FT
Sbjct:    9 VSQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELIDDSRSIRITPEAQYNPGQKATKVSDTIYQIQFGQIYLSKPTMTESDGSTSVMFPHEARLRNLTYAAPLYVDVTCEKFQAGTVPIEEQDPYEREHTPKEFIGSVPIMLRSQYCVLTNKTDKELTELNECVYDQGGYFIINGSEKVLIAQERMSNNHVYCFKKSSVSKYSWVCETRSHVEHGVRPTSTMYVQMYTKSGGKSAVSGHQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFSDIELMERFKPSLEEAFVIQEQEVALDFIGRRGSAINVSKADRLRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRIGEDDRDHYGNKRLDLAGPLLGGLFRILFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWATENLEEIKPQII--PTATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDAEVSVIRDLMQKELRIYTDAGRVCRPLFIVEQ--NQLLLQKNHVVKLQNHKHTNFRWHNLLTEGVVELIDTEEEEVCMIAMEPKDLL---QPRQLYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNFRARMDTMANILNYPQKPLVTTRAMEYLHFRELPSGVNAIVAIATYTGYNQEDSLIMNQSAIDRGLFRSTFYRCYVDQERNKSPHGMGGGAGFLNCEEFEKPSRATCLRLKHGSYHKLDNDGLVAPGTRVSGSDIIIGKTSPLPASDENGMEMRHQKRDASTTLRTHENGIIDSVMLTTNAEGFKFTKVRFRNIRIPQIGDKFASRHGQKGTIGMTYRQEDMPFTIEGVNPDIIVNPHAIPSRMTIGHLIECLLGKVSSQTGDEGDATPF-TDVTVQAISDTLHSLGYQRHGNEVLYNGHTGRRLQAQIFIGPTFYQRLKHMVDDKIHSRSRGPVTMLTRQPLEGRAREGGLRMGEMERDCLISHGSANFLMDRLFANSDAYRVHVCDLCGIIAIANLRKMTFECRTCRNKTQISQVHIPYSCKLLFQELMAMSIAPRLFT 1169          
BLAST of EWM29030.1 vs. NCBI_GenBank
Match: gi|698794892|ref|XP_009830475.1| (hypothetical protein H257_06806 [Aphanomyces astaci] >gi|574114051|gb|ETV79539.1| hypothetical protein H257_06806 [Aphanomyces astaci])

HSP 1 Score: 1553.11 bits (4020), Expect = 0.000e+0
Identity = 746/1170 (63.76%), Postives = 920/1170 (78.63%), Query Frame = 0
Query:   43 ISQDDAWVVISAFFDEKGLVRQQLDSYDSFLEVGLQECVDDAGDIVVTSEPQYGPGAEEQDLLKR-YKISFGQVYMSSPNFPEADRETHLLWPADARIRNLTYGCNLYTDVTVRVVQLDERGNETEEQREWEYE---QEHLGRMPLMILSRYCVLAKASGRELMEQNECIYDQGGYFIINGSEKVIIAQERMSNNDVYCFRRKQPHKYSWVCETRSNQVKGSRSTSTMYLQIYAPGRQKANC----INANIAHIREEIPVVVVFRALGFVTDKDILSHIVYDLRDEEMLDRFRASLEEAEVIKERNLALDFIGKRGSIENAGRAKRIQYAKLILQKEMLPHVGTEENVETRKAFFLGYTVHKMLMCSLGRAEEDDRDHYGKKRLDLAGVLIRGLFHQLFLRLCKDVRRYIRSCLNEAKNFNITQAIKSRIITDGLKYSLATGNWGDRLTATRAGVSQVLNRLTYAASLSHLRRLNTPLGREGKQAKPRQLHNSHWGMVCPAETPEGHAVGLVKNLALMAYISKESPSVPILEVLTEYGTEGLDETLPSEIALPTVTRIFCNGNWVGIHRKPMVLMKNLLDTRRNNDIPPDVSIINAISEQELRIYTDAGRVLRPLFVVESGGKRLKIKKRHIRQLAPMK--DYTFTNLLQDGLVEYIDTEEEETCMVAMDPGDLTLEGSPRTYTHCEIHPSMILGVVASVIPFPDHNQSPRNTYQSAMGKQAMGVYTSAYQNRMDTMAHVLHYPQRPLVTTKAMEYLKFRELPSGTNAVVAIMIYSGYNQEDSLIMNQSAIDRGFFRSSFYRCYQDEEK-----GRGAGGSLLSSETFEIPTRDTTEGMRFGSYEGLDEDGLCPPGVRVNGGDILIGKTSPIMSSGADGTVNRLSKKDGSTSMRTQESGIVDRVVLTTNEKGFKFVKVRIRNVRIPQIGDKFSSRHGQKGTIGMTYRQEDMPFTQQGITPDIIVNPHAIPSRMTIGQLVECLTGKVSSLAGSEGDGTAFNTSLTVDNVARVLHSLGYQRHGNETLHSGMTGRQLTAKIFIGPTFYQRLKHLVDDKIHSRARGPVAMLTRQPLEGRGRDGGLRMGEMERDCLISHGAAAFIRDRLFLNSDPYRVHVCDVCGLIAKANLRTGDFMCLSCKEKNRISQIFMPYACKLLFQELMSMCIAPRMFT 1197
            +SQ+DAW VISA+F+EKGLVRQQLDS+D F++  +QE +DD+ DI +T E QY PG +   +    Y+I FGQ+Y+S     E+D  T +++P +AR+RNLTY   LY DVT +  Q        EEQ  +E E   +E +G +P+M+ S+YCVL   S +EL E NEC+YDQGGYF+INGSEKV+IAQERMSNN VYCF++    KYSWVCETRS+  +G R TSTMY+Q+YA    K+      I A I +IR++IPVV++FRALGFV D++IL HI YD  D E+++RF+ SLEEA VI+E+ +ALDFIG+RGS  N  +A R++YA+ ILQKEMLPHVG E++ ET+KA+FLGY VHK+LMCSLGR  EDDRDHYG KRLDLAG L+ GLF  LF +L KDV+ Y++ C++  ++F ++ AIKS+ I++GL+YSLATGNWG + TA++AGVSQVLNRLTYA+SLSHLRRLNTPLGREGKQAKPRQLHN+HWGM+CPAETPEG AVGLVKNLALMAYIS  SP  PILE L E+ TE L+E + ++I +PT T+IF NGNWVG+HR+P  L+K L   RR  DI  +VS+I  + ++ELRIYTDAGRV RPLF+VE+   RL ++K+H+ +L   K   + + NLL +G+VE IDTEEEE CM+AM+P D  L  +   YTHCEIHPSMILG+ AS+IPFPDHNQSPRNTYQSAMGKQAMG+Y+S ++ RMDTMA++L+YPQ+PLVTT+AMEYL FRELPSG NA+VAI  Y+GYNQEDSLIMNQSAIDRG FRS+FYRCY D+E+     G G G   L+SE FE PTR T   ++ GSY  LD DGL  PG RV+G DI+IGKT P+ S+  +G   R  K+D ST++RT E+GI+D V+LTTN +GFKF KVR RN+RIPQIGDKF+SRHGQKGTIGMTYRQEDMPFT +G+TPDI+VNPHAIPSRMTIG L+ECL GKVSS  G EGD T F T +TV  ++  LHSLGYQR GNE L++G TGR+L A+IFIGPTFYQRLKH+VDDKIHSR+RGPV MLTRQPLEGR R+GGLRMGEMERDCLISHG+A F+ DRLF NSD YRVHVCD+CG+IA ANLR   F C +C+ K +ISQ+ +PY+CKLLFQELM+M IAPR+FT
Sbjct:    9 VSQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELIDDSRDIRITPEAQYNPGQKTNRVTDTIYQIQFGQIYLSKCTMTESDGSTSVMFPHEARLRNLTYSAPLYVDVTCQKYQAGTV--PIEEQDPYEEETTAKEFIGSIPIMLRSKYCVLTDKSDKELTELNECVYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKSSISKYSWVCETRSHVERGVRPTSTMYVQMYAKSGGKSAVSGHQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFTDVELMERFKPSLEEAFVIQEQEVALDFIGRRGSAVNVSKADRLRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRLGEDDRDHYGNKRLDLAGPLLGGLFRVLFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWSTENLEE-ITAQI-IPTATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDAEVSVIRDLMQKELRIYTDAGRVCRPLFIVENN--RLLLQKQHVVKLQNHKHTQFRWQNLLTEGVVELIDTEEEEVCMIAMEPKD--LRNARSLYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYSSNFRARMDTMANILNYPQKPLVTTRAMEYLHFRELPSGVNAIVAIATYTGYNQEDSLIMNQSAIDRGLFRSTFYRCYVDQERNKSPHGIGGGSGFLNSEEFEKPTRATCLRLKHGSYHKLDADGLVAPGTRVSGSDIIIGKTCPLPSNDENGLEARHQKRDASTTLRTHENGIIDSVMLTTNAEGFKFTKVRFRNIRIPQIGDKFASRHGQKGTIGMTYRQEDMPFTIEGVTPDIVVNPHAIPSRMTIGHLIECLLGKVSSQTGDEGDATPF-TDVTVQAISDTLHSLGYQRFGNEVLYNGHTGRRLQAQIFIGPTFYQRLKHMVDDKIHSRSRGPVTMLTRQPLEGRAREGGLRMGEMERDCLISHGSANFLMDRLFANSDAYRVHVCDLCGIIAIANLRKMTFECRTCRNKTQISQVHIPYSCKLLFQELMAMSIAPRLFT 1169          
BLAST of EWM29030.1 vs. NCBI_GenBank
Match: gi|669154024|ref|XP_008612574.1| (DNA-directed RNA polymerase II subunit RPB2 [Saprolegnia diclina VS20] >gi|530735537|gb|EQC33779.1| DNA-directed RNA polymerase II subunit RPB2 [Saprolegnia diclina VS20])

HSP 1 Score: 1551.57 bits (4016), Expect = 0.000e+0
Identity = 745/1169 (63.73%), Postives = 913/1169 (78.10%), Query Frame = 0
Query:   43 ISQDDAWVVISAFFDEKGLVRQQLDSYDSFLEVGLQECVDDAGDIVVTSEPQYGPGAEEQDLLKR-YKISFGQVYMSSPNFPEADRETHLLWPADARIRNLTYGCNLYTDVTVRVVQLDERGNETEEQREWEYE-QEHLGRMPLMILSRYCVLAKASGRELMEQNECIYDQGGYFIINGSEKVIIAQERMSNNDVYCFRRKQPHKYSWVCETRSNQVKGSRSTSTMYLQIYAPGRQKANC----INANIAHIREEIPVVVVFRALGFVTDKDILSHIVYDLRDEEMLDRFRASLEEAEVIKERNLALDFIGKRGSIENAGRAKRIQYAKLILQKEMLPHVGTEENVETRKAFFLGYTVHKMLMCSLGRAEEDDRDHYGKKRLDLAGVLIRGLFHQLFLRLCKDVRRYIRSCLNEAKNFNITQAIKSRIITDGLKYSLATGNWGDRLTATRAGVSQVLNRLTYAASLSHLRRLNTPLGREGKQAKPRQLHNSHWGMVCPAETPEGHAVGLVKNLALMAYISKESPSVPILEVLTEYGTEGLDETLPSEIALPTVTRIFCNGNWVGIHRKPMVLMKNLLDTRRNNDIPPDVSIINAISEQELRIYTDAGRVLRPLFVVESGGKRLKIKKRHIRQLAPMK--DYTFTNLLQDGLVEYIDTEEEETCMVAMDPGDLTLEGSPRT-YTHCEIHPSMILGVVASVIPFPDHNQSPRNTYQSAMGKQAMGVYTSAYQNRMDTMAHVLHYPQRPLVTTKAMEYLKFRELPSGTNAVVAIMIYSGYNQEDSLIMNQSAIDRGFFRSSFYRCYQDEEK-----GRGAGGSLLSSETFEIPTRDTTEGMRFGSYEGLDEDGLCPPGVRVNGGDILIGKTSPIMSSGADGTVNRLSKKDGSTSMRTQESGIVDRVVLTTNEKGFKFVKVRIRNVRIPQIGDKFSSRHGQKGTIGMTYRQEDMPFTQQGITPDIIVNPHAIPSRMTIGQLVECLTGKVSSLAGSEGDGTAFNTSLTVDNVARVLHSLGYQRHGNETLHSGMTGRQLTAKIFIGPTFYQRLKHLVDDKIHSRARGPVAMLTRQPLEGRGRDGGLRMGEMERDCLISHGAAAFIRDRLFLNSDPYRVHVCDVCGLIAKANLRTGDFMCLSCKEKNRISQIFMPYACKLLFQELMSMCIAPRMFT 1197
            +SQ+DAW VISA+F+EKGLVRQQLDS+D F++  +QE +DD+  I +T E QY PG +   +    Y+I FGQ+Y+S P   E+D  T +++P +AR+RNLTY   LY DVT    Q      E ++  E E+  +E +G +P+M+ S+YCVL   + +EL E NEC+YDQGGYFIINGSEKV+IAQERMSNN VYCF++    KYSWVCETRS+   G R TSTMY+Q+Y     K+      I A I +IR++IPVV++FRALGFV D++IL HI YD  D E+++RF+ SLEEA VI+E+ +ALDFIG+RGS  N  +A R++YA+ ILQKEMLPHVG E++ ET+KA+FLGY VHK+LMCSLGR  EDDRDHYG KRLDLAG L+ GLF  LF +L KDV+ Y++ C++  ++F ++ AIKS+ I++GL+YSLATGNWG + TA++AGVSQVLNRLTYA+SLSHLRRLNTPLGREGKQAKPRQLHN+HWGM+CPAETPEG AVGLVKNLALMAYIS  SP  PILE L E+ TE L+E  P  I  P  T+IF NGNWVG+HR+P  L+K L   RR  DI  +VS+I  + ++ELRIYTDAGRV RPLF+VE    +L ++K H+ +L   K  ++ + NLL +G+VE IDTEEEE CM+AM+P DL     PR  YTHCEIHPSMILG+ AS+IPFPDHNQSPRNTYQSAMGKQAMG+YTS ++ RMDTMA++L+YPQ+PLVTT+AMEYL FRELPSG NA+VAI  Y+GYNQEDSLIMNQSAIDRG FRS+FYRCY D+E+     G G G   L+ E FE P+R T   ++ GSY  LD DGL  PG RV+G DI+IGKTSP+ +S  +G   R  K+D ST++RT E+GI+D V+LTTN +GFKF KVR RN+RIPQIGDKF+SRHGQKGTIGMTYRQEDMPFT +G+ PDIIVNPHAIPSRMTIG L+ECL GKVSS  G EGD T F T +TV  ++  LHSLGYQRHGNE L++G TGR+L A+IFIGPTFYQRLKH+VDDKIHSR+RGPV MLTRQPLEGR R+GGLRMGEMERDCLISHG+A F+ DRLF NSD YRVHVCD+CG+IA ANLR   F C +C+ K +ISQ+ +PY+CKLLFQELM+M IAPR+FT
Sbjct:    9 VSQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELIDDSRSIRITPEAQYNPGQKANKVSDTIYQIQFGQIYLSKPTMTESDGSTSVMFPHEARLRNLTYAAPLYVDVTCEKYQAGTVPIEEQDPYEREHTPKEFIGSVPIMLRSQYCVLTNKTDKELTELNECVYDQGGYFIINGSEKVLIAQERMSNNHVYCFKKSSVSKYSWVCETRSHVEHGVRPTSTMYVQMYTKSGGKSAVSGHQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFSDIELMERFKPSLEEAFVIQEQEVALDFIGRRGSAINVSKADRLRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRIGEDDRDHYGNKRLDLAGPLLGGLFRILFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWATENLEEIKPQII--PQATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDAEVSVIRDLMQKELRIYTDAGRVCRPLFIVEQN--QLLLQKNHVVKLQNHKHTNFRWHNLLTEGVVELIDTEEEEVCMIAMEPKDLL---QPRQLYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYTSNFRARMDTMANILNYPQKPLVTTRAMEYLHFRELPSGVNAIVAIATYTGYNQEDSLIMNQSAIDRGLFRSTFYRCYVDQERNKSPHGMGGGAGFLNCEEFEKPSRATCLRLKHGSYHKLDNDGLVAPGTRVSGSDIIIGKTSPLPASDENGMEMRHQKRDASTTLRTHENGIIDSVMLTTNAEGFKFTKVRFRNIRIPQIGDKFASRHGQKGTIGMTYRQEDMPFTIEGVNPDIIVNPHAIPSRMTIGHLIECLLGKVSSQTGDEGDATPF-TDVTVQAISDTLHSLGYQRHGNEVLYNGHTGRRLQAQIFIGPTFYQRLKHMVDDKIHSRSRGPVTMLTRQPLEGRAREGGLRMGEMERDCLISHGSANFLMDRLFANSDAYRVHVCDLCGIIAIANLRKMTFECRTCRNKTQISQVHIPYSCKLLFQELMAMSIAPRLFT 1169          
BLAST of EWM29030.1 vs. NCBI_GenBank
Match: gi|1173942543|gb|OQR91522.1| (DNA-directed RNA polymerase II [Achlya hypogyna])

HSP 1 Score: 1550.8 bits (4014), Expect = 0.000e+0
Identity = 747/1169 (63.90%), Postives = 915/1169 (78.27%), Query Frame = 0
Query:   43 ISQDDAWVVISAFFDEKGLVRQQLDSYDSFLEVGLQECVDDAGDIVVTSEPQYGPGAEE-QDLLKRYKISFGQVYMSSPNFPEADRETHLLWPADARIRNLTYGCNLYTDVTVRVVQLDERGNETEEQREWEY-EQEHLGRMPLMILSRYCVLAKASGRELMEQNECIYDQGGYFIINGSEKVIIAQERMSNNDVYCFRRKQPHKYSWVCETRSNQVKGSRSTSTMYLQIYAPGRQKANC----INANIAHIREEIPVVVVFRALGFVTDKDILSHIVYDLRDEEMLDRFRASLEEAEVIKERNLALDFIGKRGSIENAGRAKRIQYAKLILQKEMLPHVGTEENVETRKAFFLGYTVHKMLMCSLGRAEEDDRDHYGKKRLDLAGVLIRGLFHQLFLRLCKDVRRYIRSCLNEAKNFNITQAIKSRIITDGLKYSLATGNWGDRLTATRAGVSQVLNRLTYAASLSHLRRLNTPLGREGKQAKPRQLHNSHWGMVCPAETPEGHAVGLVKNLALMAYISKESPSVPILEVLTEYGTEGLDETLPSEIALPTVTRIFCNGNWVGIHRKPMVLMKNLLDTRRNNDIPPDVSIINAISEQELRIYTDAGRVLRPLFVVESGGKRLKIKKRHIRQLAPMK--DYTFTNLLQDGLVEYIDTEEEETCMVAMDPGDLTLEGSPRT-YTHCEIHPSMILGVVASVIPFPDHNQSPRNTYQSAMGKQAMGVYTSAYQNRMDTMAHVLHYPQRPLVTTKAMEYLKFRELPSGTNAVVAIMIYSGYNQEDSLIMNQSAIDRGFFRSSFYRCYQDEEK-----GRGAGGSLLSSETFEIPTRDTTEGMRFGSYEGLDEDGLCPPGVRVNGGDILIGKTSPIMSSGADGTVNRLSKKDGSTSMRTQESGIVDRVVLTTNEKGFKFVKVRIRNVRIPQIGDKFSSRHGQKGTIGMTYRQEDMPFTQQGITPDIIVNPHAIPSRMTIGQLVECLTGKVSSLAGSEGDGTAFNTSLTVDNVARVLHSLGYQRHGNETLHSGMTGRQLTAKIFIGPTFYQRLKHLVDDKIHSRARGPVAMLTRQPLEGRGRDGGLRMGEMERDCLISHGAAAFIRDRLFLNSDPYRVHVCDVCGLIAKANLRTGDFMCLSCKEKNRISQIFMPYACKLLFQELMSMCIAPRMFT 1197
            +SQ+DAW VISA+F+EKGLVRQQLDS+D F++  +QE +DD+  I +T E QY PG ++  D +  Y+I FGQ+Y+S P   E+D  T +++P +AR+RNLTY   LY DVT    Q      E ++  E E+  +E +G +P+M+ S+YCVL   + +EL E NEC+YDQGGYFIINGSEKV+IAQERMSNN VYCF++    KYSWVCETRS+   G R TSTMY+Q+Y     K+      I A I +IR++IPVV++FRALGFV D++IL HI YD  D E+++RF+ SLEEA VI+E+ +ALDFIG+RGS  N  +A R++YA+ ILQKEMLPHVG E++ ET+KA+FLGY VHK+LMCSLGR  EDDRDHYG KRLDLAG L+ GLF  LF +L KDV+ Y++ C++  ++F ++ AIKS+ I++GL+YSLATGNWG + TA++AGVSQVLNRLTYA+SLSHLRRLNTPLGREGKQAKPRQLHN+HWGM+CPAETPEG AVGLVKNLALMAYIS  SP  PILE L E+ TE L+E  P  I  P  T+IF NGNWVG+HR+P  L+K L   RR  DI  +VS+I  +  +ELRIYTDAGRV RPLF+VE    +L ++K H+ +L   K  ++ + NLL +G+VE IDTEEEE CM+AM+P DL     PR  YTHCEIHPSMILG+ AS+IPFPDHNQSPRNTYQSAMGKQAMG+Y+S ++ RMDTMA++L+YPQ+PLVTT+AMEYL FRELPSG NA+VAI  Y+GYNQEDSLIMNQSAIDRG FRS+FYRCY D+E+     G G G   L+ E FE PTR T   ++ GSY  LD DGL  PG RV+G DI+IGKTSP+ +S  +G   R  K+D ST++RT E+GI+D V+LTTN +GFKF KVR RN+RIPQIGDKF+SRHGQKGTIGMTYRQEDMPFT +G+TPDIIVNPHAIPSRMTIG L+ECL GKVSS  G EGD T F T +TV  ++  LHSLGYQRHGNE L++G TGR+L A+IFIGPTFYQRLKH+VDDKIHSR+RGPV MLTRQPLEGR R+GGLRMGEMERDCLISHG+A F+ DRLF NSD YRVHVCD+CG+IA ANLR   F C +C+ K +ISQ+ +PY+CKLLFQELM+M IAPR+FT
Sbjct:    7 VSQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELIDDSRSIRITPEAQYNPGQKKVSDTI--YQIQFGQIYLSKPTMTESDGSTSVMFPHEARLRNLTYAAPLYVDVTCEKYQAGTVPIEEQDPYEREHTAKEFIGSVPIMLRSQYCVLTNKTDKELTELNECVYDQGGYFIINGSEKVLIAQERMSNNHVYCFKKSSVSKYSWVCETRSHVEHGVRPTSTMYVQMYTKSGGKSAVSGHQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFSDIELMERFKPSLEEAFVIQEQEVALDFIGRRGSAINVSKADRLRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRIGEDDRDHYGNKRLDLAGPLLGGLFRILFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWATENLEEIKPQII--PQATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDAEVSVIRDLMHKELRIYTDAGRVCRPLFIVEQN--QLLLQKTHVVKLQNHKHTNFRWHNLLTEGVVELIDTEEEEVCMIAMEPKDLR---QPRQLYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYSSNFRARMDTMANILNYPQKPLVTTRAMEYLHFRELPSGVNAIVAIATYTGYNQEDSLIMNQSAIDRGLFRSTFYRCYVDQERNKSPHGMGGGAGFLNCEEFEKPTRATCLRLKHGSYHKLDNDGLVAPGTRVSGNDIIIGKTSPLPTSDENGMEVRHQKRDASTTLRTHENGIIDSVMLTTNAEGFKFTKVRFRNIRIPQIGDKFASRHGQKGTIGMTYRQEDMPFTIEGVTPDIIVNPHAIPSRMTIGHLIECLLGKVSSQTGDEGDATPF-TDVTVQAISDTLHSLGYQRHGNEVLYNGHTGRRLQAQIFIGPTFYQRLKHMVDDKIHSRSRGPVTMLTRQPLEGRAREGGLRMGEMERDCLISHGSANFLMDRLFANSDAYRVHVCDLCGIIAIANLRKMTFECRTCRNKTQISQVHIPYSCKLLFQELMAMSIAPRLFT 1165          
BLAST of EWM29030.1 vs. NCBI_GenBank
Match: gi|673041019|ref|XP_008874470.1| (hypothetical protein H310_10011 [Aphanomyces invadans] >gi|574469680|gb|ETV96693.1| hypothetical protein H310_10011 [Aphanomyces invadans])

HSP 1 Score: 1550.03 bits (4012), Expect = 0.000e+0
Identity = 746/1168 (63.87%), Postives = 919/1168 (78.68%), Query Frame = 0
Query:   43 ISQDDAWVVISAFFDEKGLVRQQLDSYDSFLEVGLQECVDDAGDIVVTSEPQYGPGAEEQDLLKR-YKISFGQVYMSSPNFPEADRETHLLWPADARIRNLTYGCNLYTDVTVRVVQLDERG-NETEEQREWEYEQEHLGRMPLMILSRYCVLAKASGRELMEQNECIYDQGGYFIINGSEKVIIAQERMSNNDVYCFRRKQPHKYSWVCETRSNQVKGSRSTSTMYLQIYAPGRQKANC----INANIAHIREEIPVVVVFRALGFVTDKDILSHIVYDLRDEEMLDRFRASLEEAEVIKERNLALDFIGKRGSIENAGRAKRIQYAKLILQKEMLPHVGTEENVETRKAFFLGYTVHKMLMCSLGRAEEDDRDHYGKKRLDLAGVLIRGLFHQLFLRLCKDVRRYIRSCLNEAKNFNITQAIKSRIITDGLKYSLATGNWGDRLTATRAGVSQVLNRLTYAASLSHLRRLNTPLGREGKQAKPRQLHNSHWGMVCPAETPEGHAVGLVKNLALMAYISKESPSVPILEVLTEYGTEGLDETLPSEIALPTVTRIFCNGNWVGIHRKPMVLMKNLLDTRRNNDIPPDVSIINAISEQELRIYTDAGRVLRPLFVVESGGKRLKIKKRHIRQLAPMK--DYTFTNLLQDGLVEYIDTEEEETCMVAMDPGDLTLEGSPRTYTHCEIHPSMILGVVASVIPFPDHNQSPRNTYQSAMGKQAMGVYTSAYQNRMDTMAHVLHYPQRPLVTTKAMEYLKFRELPSGTNAVVAIMIYSGYNQEDSLIMNQSAIDRGFFRSSFYRCYQDEEK-----GRGAGGSLLSSETFEIPTRDTTEGMRFGSYEGLDEDGLCPPGVRVNGGDILIGKTSPIMSSGADGTVNRLSKKDGSTSMRTQESGIVDRVVLTTNEKGFKFVKVRIRNVRIPQIGDKFSSRHGQKGTIGMTYRQEDMPFTQQGITPDIIVNPHAIPSRMTIGQLVECLTGKVSSLAGSEGDGTAFNTSLTVDNVARVLHSLGYQRHGNETLHSGMTGRQLTAKIFIGPTFYQRLKHLVDDKIHSRARGPVAMLTRQPLEGRGRDGGLRMGEMERDCLISHGAAAFIRDRLFLNSDPYRVHVCDVCGLIAKANLRTGDFMCLSCKEKNRISQIFMPYACKLLFQELMSMCIAPRMFT 1197
            +SQ+DAW VISA+F+EKGLVRQQLDS+D F++  +QE +DD+ DI +T E QY PG +   +    Y+I FGQ+Y+S     E+D  T +++P +AR+RNLTY   LY DVT +  Q       E E   E    +E +G +P+M+ S+YCVL   S +EL E NEC+YDQGGYF+INGSEKV+IAQERMSNN VYCF++    KYSWVCETRS+  +G+R TSTMY+Q+YA    K+      I A I +IR++IPVV++FRALGFV D++IL HI YD  D E+++RF+ SLEEA VI+E+ +ALDFIG+RGS  N  +A R++YA+ ILQKEMLPHVG E++ ET+KA+FLGY VHK+LMCSLGR  EDDRDHYG KRLDLAG L+ GLF  LF +L KDV+ Y++ C++  ++F ++ AIKS+ I++GL+YSLATGNWG + TA++AGVSQVLNRLTYA+SLSHLRRLNTPLGREGKQAKPRQLHN+HWGM+CPAETPEG AVGLVKNLALMAYIS  SP  PILE L E+ TE L+E + ++I +PT T+IF NGNWVG+HR+P  L+K L   RR  DI  +VS+I  + ++ELRIYTDAGRV RPLF+VE+   RL ++K+H+ +L   K   + + NLL +G+VE IDTEEEE CM+AM+P D  L  +   YTHCEIHPSMILG+ AS+IPFPDHNQSPRNTYQSAMGKQAMG+Y+S ++ RMDTMA++L+YPQ+PLVTT+AMEYL FRELPSG NA+VAI  Y+GYNQEDSLIMNQSAIDRG FRS+FYRCY D+E+     G G G   ++SE FE PTR T   ++ GSY  LD DGL  PG RV+G DI+IGKTSP+ SS  +G   R  K+D ST++RT E+GI+D V+LTTN +GFKF KVR RN+RIPQIGDKF+SRHGQKGTIGMTYRQEDMPFT +G+TPDIIVNPHAIPSRMTIG L+ECL GKVSS  G EGD T F T +TV  ++  LHSLGYQR GNE L++G TGR+L A+IFIGPTFYQRLKH+VDDKIHSR+RGPV MLTRQPLEGR R+GGLRMGEMERDCLISHG+A F+ DRLF NSD YRVHVCD+CG+IA ANLR   F C +C+ K +ISQ+ +PY+CKLLFQELM+M IAPR+FT
Sbjct:    9 VSQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQELIDDSRDIRITPEAQYNPGQKSNRVTDTIYQIQFGQIYLSKCTMTESDGSTSVMFPHEARLRNLTYSAPLYVDVTCQKFQAGTVPIEEQEPYEEETTAKEFIGSIPIMLRSKYCVLTDKSDKELTELNECVYDQGGYFVINGSEKVLIAQERMSNNHVYCFKKSSISKYSWVCETRSHVERGARPTSTMYVQMYAKSGGKSAVSGHQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFTDVELMERFKPSLEEAFVIQEQEVALDFIGRRGSAVNVSKADRLRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRLGEDDRDHYGNKRLDLAGPLLGGLFRVLFKKLTKDVKGYLQKCVDAGRDFQLSLAIKSKTISNGLRYSLATGNWGMQKTASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAKPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWSTENLEE-ITAQI-IPTATKIFVNGNWVGVHREPNELVKTLRSLRRCVDIDAEVSVIRDLMQKELRIYTDAGRVCRPLFIVEN--NRLLLQKQHVVKLQNHKHTHFRWQNLLTEGVVELIDTEEEEVCMIAMEPKD--LRNARSLYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYSSNFRARMDTMANILNYPQKPLVTTRAMEYLHFRELPSGVNAIVAIATYTGYNQEDSLIMNQSAIDRGLFRSTFYRCYVDQERNKSPHGIGGGSGFMNSEEFEKPTRATCMRLKHGSYHKLDADGLVAPGTRVSGSDIIIGKTSPLPSSDENGLEARHQKRDASTTLRTHENGIIDSVMLTTNAEGFKFTKVRFRNIRIPQIGDKFASRHGQKGTIGMTYRQEDMPFTIEGVTPDIIVNPHAIPSRMTIGHLIECLLGKVSSQTGDEGDATPF-TDVTVQAISDTLHSLGYQRFGNEVLYNGHTGRRLQAQIFIGPTFYQRLKHMVDDKIHSRSRGPVTMLTRQPLEGRAREGGLRMGEMERDCLISHGSANFLMDRLFANSDAYRVHVCDLCGIIAIANLRKMTFECRTCRNKTQISQVHIPYSCKLLFQELMAMSIAPRLFT 1169          
BLAST of EWM29030.1 vs. NCBI_GenBank
Match: gi|1214696920|gb|OWZ10318.1| (DNA-directed RNA polymerase II [Phytophthora megakarya])

HSP 1 Score: 1547.33 bits (4005), Expect = 0.000e+0
Identity = 751/1190 (63.11%), Postives = 917/1190 (77.06%), Query Frame = 0
Query:   24 DTTGDEGEGSLGMGGEAEEISQDDAWVVISAFFDEKGLVRQQLDSYDSFLEVGLQECVDDAGDIVVTSEPQYGPGAEEQDLLKRYKISFGQVYMSSPNFPEADRETHLLWPADARIRNLTYGCNLYTDVTVRVVQLDERG----NETEEQREWEYEQEHLGRMPLMILSRYCVLAKASGRELMEQNECIYDQGGYFIINGSEKVIIAQERMSNNDVYCFRRKQPHKYSWVCETRSNQVKGSRSTSTMYLQIYAPGRQKA----NCINANIAHIREEIPVVVVFRALGFVTDKDILSHIVYDLRDEEMLDRFRASLEEAEVIKERNLALDFIGKRGSIENAGRAKRIQYAKLILQKEMLPHVGTEENVETRKAFFLGYTVHKMLMCSLGRAEEDDRDHYGKKRLDLAGVLIRGLFHQLFLRLCKDVRRYIRSCLNEAKNFNITQAIKSRIITDGLKYSLATGNWGDRLTATRAGVSQVLNRLTYAASLSHLRRLNTPLGREGKQAKPRQLHNSHWGMVCPAETPEGHAVGLVKNLALMAYISKESPSVPILEVLTEYGTEGLDETLPSEIALPTVTRIFCNGNWVGIHRKPMVLMKNLLDTRRNNDIPPDVSIINAISEQELRIYTDAGRVLRPLFVVESGGKRLKIKKRHIRQLAPMK--DYTFTNLLQDGLVEYIDTEEEETCMVAMDPGDLTLEGSPRTYTHCEIHPSMILGVVASVIPFPDHNQSPRNTYQSAMGKQAMGVYTSAYQNRMDTMAHVLHYPQRPLVTTKAMEYLKFRELPSGTNAVVAIMIYSGYNQEDSLIMNQSAIDRGFFRSSFYRCYQDEEKGRGAGGSLL------SSETFEIPTRDTTEGMRFGSYEGLDEDGLCPPGVRVNGGDILIGKTSPIMSSGADGTVNRLSKKDGSTSMRTQESGIVDRVVLTTNEKGFKFVKVRIRNVRIPQIGDKFSSRHGQKGTIGMTYRQEDMPFTQQGITPDIIVNPHAIPSRMTIGQLVECLTGKVSSLAGSEGDGTAFNTSLTVDNVARVLHSLGYQRHGNETLHSGMTGRQLTAKIFIGPTFYQRLKHLVDDKIHSRARGPVAMLTRQPLEGRGRDGGLRMGEMERDCLISHGAAAFIRDRLFLNSDPYRVHVCDVCGLIAKANLRTGDFMCLSCKEKNRISQIFMPYACKLLFQELMSMCIAPRMFT 1197
            DT  D+  G LG+      +SQ+DAW VIS++F+EKGLVRQQLDS+D F++  +QE VDD+  I +  E QY PG  + +    Y ISFGQ+Y+S P   EAD  T +++P +AR+RNLTY   LY DV  +  Q    G     + +   + E  +E +G +P+M+ S+YCVL   + +EL E NEC+YDQGGYFIINGSEKV+IAQERMSNN VYCFR+    KYSWVCETRS+   G R TSTMY+Q+Y     K+    N I A I +IR++IPVV++FRALGFV D++IL HI YD  D E+++RF++SLEEA VI+E+ +ALDFIG+RGS  N  +A RI+YA+ ILQKEMLPHVG E++ ET+KA+FLGY VHK+LMCSLGR  EDDRDHYG KRLDLAG L+ GLF  LF +L KDV+ +++ C++  K+FN+T AI+SR IT+GL+YSLATGNWG + +A++AGVSQVLNRLTYA+SLSHLRRLNTPLGREGKQA+PRQLHN+HWGM+CPAETPEG AVGLVKNLALMAYIS  SP  PILE L E+ TE L+E  P  I  P  T+IF NGNWVG+HR+P  L++ L   RR  DI  +VS+I  +  +ELRIYTDAGRV RPLF+VE    +L ++K  + +L   K  +Y + NLL DG+VE IDTEEEE CM+AM+P D+   GS + +THCEIHPSMILG+ AS+IPFPDHNQSPRNTYQSAMGKQAMG+Y S ++ RMDTMA+VL+YPQ+PLVTT+AMEYL FRELPSG NA+V I  Y+GYNQEDSLIMNQSAIDRGFFRS+FYRCY D+E+ +   G         + E FE P+R+   G+R GSY  LD DGL  PG RV+G DI+IGKTSP+  S       R  K+D ST++R+ E+GI+D V+LTTN  GFKF KVR RN+RIPQIGDKF+SRHGQKGTIGMTYRQEDMPFT +GITPDIIVNPHAIPSRMT+G LVECL GKVSS  G EGD T F T +TV  +A  LH+LGYQ+HGNE L+SG TGR+LTA+IFIGPTFYQRLKH+VDDKIHSR+RGPV MLTRQP+EGR R+GGLRMGEMERDCLISHG+A F+ DRLF NSD YRVHVCD+CG+IA ANLR   F C +C+ K +ISQ+ +PY+CKLLFQELMSM IAPR+FT
Sbjct:   10 DTERDDA-GDLGLA-TGSAVSQEDAWAVISSYFEEKGLVRQQLDSFDEFIQNTMQELVDDSRSIRINPEAQYAPGQAKTNTDTIYNISFGQIYLSKPTMTEADGSTSVMFPHEARLRNLTYSAPLYVDVVCQKYQAPSSGPANLEDMDPYDQVETPKEFIGMVPIMLRSQYCVLTHKTDKELTELNECVYDQGGYFIINGSEKVLIAQERMSNNHVYCFRKNAASKYSWVCETRSHVEHGVRPTSTMYVQMYQKSGGKSAITGNQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFSDAELMERFKSSLEEAFVIQEQEVALDFIGRRGSAINVSKADRIRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRIGEDDRDHYGNKRLDLAGPLLGGLFRILFKKLTKDVKSFLQKCVDNGKDFNLTLAIRSRTITNGLRYSLATGNWGMQKSASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAQPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWATENLEEIKPQII--PHSTKIFVNGNWVGVHREPNELIRTLRSLRRCVDIDAEVSVIRDLMNKELRIYTDAGRVCRPLFIVED--NQLLLQKEQVVKLQNHKITNYRWHNLLTDGVVELIDTEEEEVCMIAMEPKDVG-TGS-QIHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYCSNFRARMDTMANVLNYPQKPLVTTRAMEYLHFRELPSGINAIVGIASYTGYNQEDSLIMNQSAIDRGFFRSTFYRCYIDQERNKSPHGGPGGGAGGSNCEEFEKPSRENCLGLRHGSYHKLDNDGLVAPGTRVSGNDIIIGKTSPLPQSEDSSLEQRHQKRDASTALRSHENGIIDSVMLTTNADGFKFTKVRFRNIRIPQIGDKFASRHGQKGTIGMTYRQEDMPFTVEGITPDIIVNPHAIPSRMTVGHLVECLLGKVSSQTGDEGDATPF-TDVTVQAIADTLHNLGYQKHGNEVLYSGHTGRRLTAQIFIGPTFYQRLKHMVDDKIHSRSRGPVTMLTRQPMEGRAREGGLRMGEMERDCLISHGSANFLMDRLFANSDAYRVHVCDICGIIAIANLRKMTFECRTCRNKTQISQVHIPYSCKLLFQELMSMSIAPRLFT 1190          
BLAST of EWM29030.1 vs. NCBI_GenBank
Match: gi|301101902|ref|XP_002900039.1| (DNA-directed RNA polymerase II 135 kDa polypeptide [Phytophthora infestans T30-4] >gi|262102614|gb|EEY60666.1| DNA-directed RNA polymerase II 135 kDa polypeptide [Phytophthora infestans T30-4])

HSP 1 Score: 1547.33 bits (4005), Expect = 0.000e+0
Identity = 748/1190 (62.86%), Postives = 918/1190 (77.14%), Query Frame = 0
Query:   24 DTTGDEGEGSLGMGGEAEEISQDDAWVVISAFFDEKGLVRQQLDSYDSFLEVGLQECVDDAGDIVVTSEPQYGPGAEEQDLLKRYKISFGQVYMSSPNFPEADRETHLLWPADARIRNLTYGCNLYTDVTVRVVQLDERG----NETEEQREWEYEQEHLGRMPLMILSRYCVLAKASGRELMEQNECIYDQGGYFIINGSEKVIIAQERMSNNDVYCFRRKQPHKYSWVCETRSNQVKGSRSTSTMYLQIYAPGRQKA----NCINANIAHIREEIPVVVVFRALGFVTDKDILSHIVYDLRDEEMLDRFRASLEEAEVIKERNLALDFIGKRGSIENAGRAKRIQYAKLILQKEMLPHVGTEENVETRKAFFLGYTVHKMLMCSLGRAEEDDRDHYGKKRLDLAGVLIRGLFHQLFLRLCKDVRRYIRSCLNEAKNFNITQAIKSRIITDGLKYSLATGNWGDRLTATRAGVSQVLNRLTYAASLSHLRRLNTPLGREGKQAKPRQLHNSHWGMVCPAETPEGHAVGLVKNLALMAYISKESPSVPILEVLTEYGTEGLDETLPSEIALPTVTRIFCNGNWVGIHRKPMVLMKNLLDTRRNNDIPPDVSIINAISEQELRIYTDAGRVLRPLFVVESGGKRLKIKKRHIRQLAPMK--DYTFTNLLQDGLVEYIDTEEEETCMVAMDPGDLTLEGSPRTYTHCEIHPSMILGVVASVIPFPDHNQSPRNTYQSAMGKQAMGVYTSAYQNRMDTMAHVLHYPQRPLVTTKAMEYLKFRELPSGTNAVVAIMIYSGYNQEDSLIMNQSAIDRGFFRSSFYRCYQDEEKGRG------AGGSLLSSETFEIPTRDTTEGMRFGSYEGLDEDGLCPPGVRVNGGDILIGKTSPIMSSGADGTVNRLSKKDGSTSMRTQESGIVDRVVLTTNEKGFKFVKVRIRNVRIPQIGDKFSSRHGQKGTIGMTYRQEDMPFTQQGITPDIIVNPHAIPSRMTIGQLVECLTGKVSSLAGSEGDGTAFNTSLTVDNVARVLHSLGYQRHGNETLHSGMTGRQLTAKIFIGPTFYQRLKHLVDDKIHSRARGPVAMLTRQPLEGRGRDGGLRMGEMERDCLISHGAAAFIRDRLFLNSDPYRVHVCDVCGLIAKANLRTGDFMCLSCKEKNRISQIFMPYACKLLFQELMSMCIAPRMFT 1197
            DT  D+  G +G+      +SQ+DAW VIS++F+EKGLVRQQLDS+D F++  +QE VDD+  I +  E QY PG  + +    Y ISFGQ+Y+S P   EAD  T +++P +AR+RNLTY   LY DV  +  Q    G     + E   + E  +E +G +P+M+ S+YCVL   + +EL E NEC+YDQGGYFIINGSEKV+IAQERMSNN VYCFR+    KYSWVCETRS+   G R TSTMY+Q+Y  G  K+    N I A I +IR++IPVV++FRALGFV D++IL HI YD  D E+++RF++SLEEA VI+E+ +ALDFIG+RGS  N  +A RI+YA+ ILQKEMLPHVG E++ ET+KA+FLGY VHK+LMCSLGR  EDDRDHYG KRLDLAG L+ GLF  LF +L KDV+ +++ C++  K+FN+T AI+SR IT+GL+YSLATGNWG + +A++AGVSQVLNRLTYA+SLSHLRRLNTPLGREGKQA+PRQLHN+HWGM+CPAETPEG AVGLVKNLALMAYIS  SP  PILE L E+ TE L+E  P  I  P  T+IF NGNWVG+HR+P  L++ L   RR  DI  +VS+I  +  +ELRIYTDAGRV RPLF+VE    +L ++K  + +L   K  +Y + NLL DG+VE IDTEEEE CM+AM+P D+   GS + +THCEIHPSMILG+ AS+IPFPDHNQSPRNTYQSAMGKQAMG+Y S ++ RMDTMA+VL+YPQ+PLVTT+AMEYL FRELPSG NA+V I  Y+GYNQEDSLIMNQSAIDRGFFRS+FYRCY D+E+ +        G    + E FE P+R+   G+R GSY  LD DGL  PG RV+G DI+IGKTSP+  S       R  K+D ST++R+ E+GI+D V+LTTN  GFKF KVR RN+R+PQIGDKF+SRHGQKGTIGMTYRQEDMPFT +GITPDI+VNPHAIPSRMT+G LVECL GKVSS  G EGD T F T +TV  +A  LH+LGYQ+HGNE ++SG TGR+LTA+IFIGPTFYQRLKH+VDDKIHSR+RGPV MLTRQP+EGR R+GGLRMGEMERDCLISHG+A F+ DRLF NSD YRVHVCD+CG+IA ANLR   F C +C+ K +ISQ+ +PY+CKLLFQELM+M IAPR+FT
Sbjct:   10 DTERDDA-GDMGLAA-GSAVSQEDAWAVISSYFEEKGLVRQQLDSFDEFIQNTMQELVDDSRSIRINPEAQYAPGQAKTNTDTIYNISFGQIYLSKPTMTEADGSTSVMFPHEARLRNLTYSAPLYVDVVCQKYQAPSSGPANLEDMEPYDQVETPKEFIGMVPIMLRSQYCVLTHKTDKELTELNECVYDQGGYFIINGSEKVLIAQERMSNNHVYCFRKNAASKYSWVCETRSHVEHGVRPTSTMYVQMYQKGGGKSAITGNQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFSDAELMERFKSSLEEAFVIQEQEVALDFIGRRGSAINVSKADRIRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRIGEDDRDHYGNKRLDLAGPLLGGLFRILFKKLTKDVKSFLQKCVDNGKDFNLTLAIRSRTITNGLRYSLATGNWGMQKSASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAQPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWATENLEEIKPQII--PHSTKIFVNGNWVGVHREPNELIRTLRSLRRCVDIDAEVSVIRDLMNKELRIYTDAGRVCRPLFIVED--NQLLLQKEQVVKLQNHKITNYRWHNLLTDGVVELIDTEEEEVCMIAMEPKDVG-TGS-QIHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYCSNFRARMDTMANVLNYPQKPLVTTRAMEYLHFRELPSGINAIVGIASYTGYNQEDSLIMNQSAIDRGFFRSTFYRCYIDQERNKSPHGGPGGGAGGANCEEFEKPSRENCLGLRHGSYHKLDNDGLVAPGTRVSGNDIIIGKTSPLPQSEDSSLEQRHQKRDASTALRSHENGIIDSVMLTTNADGFKFTKVRFRNIRVPQIGDKFASRHGQKGTIGMTYRQEDMPFTVEGITPDIVVNPHAIPSRMTVGHLVECLLGKVSSQTGDEGDATPF-TDVTVQAIADTLHNLGYQKHGNEVMYSGHTGRRLTAQIFIGPTFYQRLKHMVDDKIHSRSRGPVTMLTRQPMEGRAREGGLRMGEMERDCLISHGSANFLMDRLFANSDAYRVHVCDICGIIAIANLRKMTFECRTCRNKTQISQVHIPYSCKLLFQELMAMSIAPRLFT 1190          
BLAST of EWM29030.1 vs. NCBI_GenBank
Match: gi|953486038|emb|CEG50216.1| (dna-directed rna polymerase ii 135 kda polypeptide [Plasmopara halstedii])

HSP 1 Score: 1546.95 bits (4004), Expect = 0.000e+0
Identity = 751/1190 (63.11%), Postives = 915/1190 (76.89%), Query Frame = 0
Query:   24 DTTGDEGEGSLGMGGEAEEISQDDAWVVISAFFDEKGLVRQQLDSYDSFLEVGLQECVDDAGDIVVTSEPQYGPGAEEQDLLKRYKISFGQVYMSSPNFPEADRETHLLWPADARIRNLTYGCNLYTDVTVRVVQLDERGNETEEQR----EWEYEQEHLGRMPLMILSRYCVLAKASGRELMEQNECIYDQGGYFIINGSEKVIIAQERMSNNDVYCFRRKQPHKYSWVCETRSNQVKGSRSTSTMYLQIYAPGRQKA----NCINANIAHIREEIPVVVVFRALGFVTDKDILSHIVYDLRDEEMLDRFRASLEEAEVIKERNLALDFIGKRGSIENAGRAKRIQYAKLILQKEMLPHVGTEENVETRKAFFLGYTVHKMLMCSLGRAEEDDRDHYGKKRLDLAGVLIRGLFHQLFLRLCKDVRRYIRSCLNEAKNFNITQAIKSRIITDGLKYSLATGNWGDRLTATRAGVSQVLNRLTYAASLSHLRRLNTPLGREGKQAKPRQLHNSHWGMVCPAETPEGHAVGLVKNLALMAYISKESPSVPILEVLTEYGTEGLDETLPSEIALPTVTRIFCNGNWVGIHRKPMVLMKNLLDTRRNNDIPPDVSIINAISEQELRIYTDAGRVLRPLFVVESGGKRLKIKKRHIRQLAPMK--DYTFTNLLQDGLVEYIDTEEEETCMVAMDPGDLTLEGSPRTYTHCEIHPSMILGVVASVIPFPDHNQSPRNTYQSAMGKQAMGVYTSAYQNRMDTMAHVLHYPQRPLVTTKAMEYLKFRELPSGTNAVVAIMIYSGYNQEDSLIMNQSAIDRGFFRSSFYRCYQDEEKGRG------AGGSLLSSETFEIPTRDTTEGMRFGSYEGLDEDGLCPPGVRVNGGDILIGKTSPIMSSGADGTVNRLSKKDGSTSMRTQESGIVDRVVLTTNEKGFKFVKVRIRNVRIPQIGDKFSSRHGQKGTIGMTYRQEDMPFTQQGITPDIIVNPHAIPSRMTIGQLVECLTGKVSSLAGSEGDGTAFNTSLTVDNVARVLHSLGYQRHGNETLHSGMTGRQLTAKIFIGPTFYQRLKHLVDDKIHSRARGPVAMLTRQPLEGRGRDGGLRMGEMERDCLISHGAAAFIRDRLFLNSDPYRVHVCDVCGLIAKANLRTGDFMCLSCKEKNRISQIFMPYACKLLFQELMSMCIAPRMFT 1197
            DT  +  E  L  G     +SQ+DAW VIS++F+EKGLVRQQLDS+D F++  +QE VDD+  I +  E QY PG  + +    Y ISFGQ+Y+S P   EAD  T +++P +AR+RNLTY   LY DV  +  Q    G    E      + E  +E +G +P+M+ S+YCVL   + +EL E NECIYDQGGYFIINGSEKV+IAQERMSNN VYCFR+    KYSWVCETRS+   G R TSTMY+Q+Y  G  K+    N I A I +IR++IPVV++FRALGFV D++IL HI YD  D E+++RF++SLEEA VI+E+ +ALDFIG+RGS  N  +A RI+YA+ ILQKEMLPHVG E++ ET+KA+FLGY VHK+LMCSLGR  EDDRDHYG KRLDLAG L+  LF  LF +L KDV+ +++ C++  K+FN+T AI+SR IT+GL+YSLATGNWG + +A++AGVSQVLNRLTYA+SLSHLRRLNTPLGREGKQA+PRQLHN+HWGM+CPAETPEG AVGLVKNLALMAYIS  SP  PILE L E+ TE L+E  P  I  P  T+IF NGNWVG+HR+P  L++ L   RR  DI  +VS+I  +  +ELRIYTDAGRV RPLF+VE    +L ++K  + +L   K  +Y + NLL DG+VE IDTEEEE CM+AM+P D+ + GS + +THCEIHPSMILG+ AS+IPFPDHNQSPRNTYQSAMGKQAMG+Y S ++ RMDTMA+VL+YPQ+PLVTT+AMEYL FRELPSG NA+V I  Y+GYNQEDSLIMNQSAIDRGFFRS+FYRCY D+E+ +        G    + E FE P+RD   G+R GSY  LD DGL  PG RV+G DI+IGKTSP+  S       R  K+D ST++R+ E+GI+D V+LTTN  GFKF KVR RN+RIPQIGDKF+SRHGQKGTIGMTYRQEDMPFT +GITPDI+VNPHAIPSRMT+G LVECL GKVSS  G EGD T F T +TV  +A  LH+LGYQ+HGNE ++SG TGR+LTA+IFIGPTFYQRLKH+VDDKIHSR+RGPV MLTRQP+EGR R+GGLRMGEMERDCLISHG+A F+ DRLF NSD YRVHVCD+CG+IA ANLR   F C +C+ K +ISQ+ +PY+CKLLFQELMSM IAPR+FT
Sbjct:   10 DTERENHELGLAPGAS---VSQEDAWAVISSYFEEKGLVRQQLDSFDEFIQNTMQELVDDSRSIRINPEAQYAPGQAKTNTDTIYNISFGQIYLSKPTMTEADGSTSVMFPHEARLRNLTYSAPLYVDVVCQKYQAPTSGPANLEDMDPYDQVETPKEFIGMVPIMLRSQYCVLTHKTDKELTELNECIYDQGGYFIINGSEKVLIAQERMSNNHVYCFRKNAASKYSWVCETRSHVEHGVRPTSTMYVQMYQKGGGKSAITGNQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFSDAELMERFKSSLEEAFVIQEQEVALDFIGRRGSAINVSKADRIRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRIGEDDRDHYGNKRLDLAGPLLGSLFRVLFKKLTKDVKSFLQKCVDNGKDFNLTLAIRSRTITNGLRYSLATGNWGMQKSASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAQPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWATENLEEIKPQII--PHSTKIFVNGNWVGVHREPNELIRTLRSLRRCVDIDAEVSVIRDLMNKELRIYTDAGRVCRPLFIVED--NQLLLQKEQVVKLQNHKITNYCWHNLLTDGVVELIDTEEEEVCMIAMEPKDVGI-GS-QIHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYCSNFRARMDTMANVLNYPQKPLVTTRAMEYLHFRELPSGINAIVGIASYTGYNQEDSLIMNQSAIDRGFFRSTFYRCYVDQERNKSPHGGPGGGAGGANCEEFEKPSRDNCLGLRHGSYHKLDNDGLVAPGTRVSGNDIIIGKTSPLPVSEDSSLEQRHQKRDASTALRSHENGIIDSVMLTTNADGFKFTKVRFRNIRIPQIGDKFASRHGQKGTIGMTYRQEDMPFTVEGITPDIVVNPHAIPSRMTVGHLVECLLGKVSSQTGDEGDATPF-TDVTVQAIADTLHNLGYQKHGNEVMYSGHTGRRLTAQIFIGPTFYQRLKHMVDDKIHSRSRGPVTMLTRQPMEGRAREGGLRMGEMERDCLISHGSANFLMDRLFANSDAYRVHVCDICGIIAIANLRKMTFECRTCRNKTQISQVHIPYSCKLLFQELMSMSIAPRLFT 1189          
BLAST of EWM29030.1 vs. NCBI_GenBank
Match: gi|675162763|ref|XP_008890266.1| (hypothetical protein PPTG_00604 [Phytophthora parasitica INRA-310] >gi|566033987|gb|ETI56898.1| hypothetical protein F443_00723 [Phytophthora parasitica P1569] >gi|567971664|gb|ETK96668.1| hypothetical protein L915_00666 [Phytophthora parasitica] >gi|567999997|gb|ETL50027.1| hypothetical protein L916_00665 [Phytophthora parasitica] >gi|568029164|gb|ETM03095.1| hypothetical protein L917_00629 [Phytophthora parasitica] >gi|568059788|gb|ETM56354.1| hypothetical protein L914_00657 [Phytophthora parasitica] >gi|568109566|gb|ETN24173.1| hypothetical protein PPTG_00604 [Phytophthora parasitica INRA-310] >gi|570337682|gb|ETO85630.1| hypothetical protein F444_00713 [Phytophthora parasitica P1976] >gi|570961694|gb|ETP26673.1| hypothetical protein F441_00707 [Phytophthora parasitica CJ01A1] >gi|570998445|gb|ETP54668.1| hypothetical protein F442_00675 [Phytophthora parasitica P10297] >gi|970628914|gb|KUF76345.1| DNA-directed RNA polymerase [Phytophthora nicotianae])

HSP 1 Score: 1546.18 bits (4002), Expect = 0.000e+0
Identity = 749/1190 (62.94%), Postives = 917/1190 (77.06%), Query Frame = 0
Query:   24 DTTGDEGEGSLGMGGEAEEISQDDAWVVISAFFDEKGLVRQQLDSYDSFLEVGLQECVDDAGDIVVTSEPQYGPGAEEQDLLKRYKISFGQVYMSSPNFPEADRETHLLWPADARIRNLTYGCNLYTDVTVRVVQLDERG----NETEEQREWEYEQEHLGRMPLMILSRYCVLAKASGRELMEQNECIYDQGGYFIINGSEKVIIAQERMSNNDVYCFRRKQPHKYSWVCETRSNQVKGSRSTSTMYLQIYAPGRQKA----NCINANIAHIREEIPVVVVFRALGFVTDKDILSHIVYDLRDEEMLDRFRASLEEAEVIKERNLALDFIGKRGSIENAGRAKRIQYAKLILQKEMLPHVGTEENVETRKAFFLGYTVHKMLMCSLGRAEEDDRDHYGKKRLDLAGVLIRGLFHQLFLRLCKDVRRYIRSCLNEAKNFNITQAIKSRIITDGLKYSLATGNWGDRLTATRAGVSQVLNRLTYAASLSHLRRLNTPLGREGKQAKPRQLHNSHWGMVCPAETPEGHAVGLVKNLALMAYISKESPSVPILEVLTEYGTEGLDETLPSEIALPTVTRIFCNGNWVGIHRKPMVLMKNLLDTRRNNDIPPDVSIINAISEQELRIYTDAGRVLRPLFVVESGGKRLKIKKRHIRQLAPMK--DYTFTNLLQDGLVEYIDTEEEETCMVAMDPGDLTLEGSPRTYTHCEIHPSMILGVVASVIPFPDHNQSPRNTYQSAMGKQAMGVYTSAYQNRMDTMAHVLHYPQRPLVTTKAMEYLKFRELPSGTNAVVAIMIYSGYNQEDSLIMNQSAIDRGFFRSSFYRCYQDEEKGRG------AGGSLLSSETFEIPTRDTTEGMRFGSYEGLDEDGLCPPGVRVNGGDILIGKTSPIMSSGADGTVNRLSKKDGSTSMRTQESGIVDRVVLTTNEKGFKFVKVRIRNVRIPQIGDKFSSRHGQKGTIGMTYRQEDMPFTQQGITPDIIVNPHAIPSRMTIGQLVECLTGKVSSLAGSEGDGTAFNTSLTVDNVARVLHSLGYQRHGNETLHSGMTGRQLTAKIFIGPTFYQRLKHLVDDKIHSRARGPVAMLTRQPLEGRGRDGGLRMGEMERDCLISHGAAAFIRDRLFLNSDPYRVHVCDVCGLIAKANLRTGDFMCLSCKEKNRISQIFMPYACKLLFQELMSMCIAPRMFT 1197
            DT  D+  G +G+      +SQ+DAW VIS++F+EKGLVRQQLDS+D F++  +QE VDD+  I +  E QY PG  + +    Y ISFGQ+Y+S P   EAD  T +++P +AR+RNLTY   LY DV  +  Q    G     + E   + E  +E +G +P+M+ S+YCVL   + +EL E NEC+YDQGGYFIINGSEKV+IAQERMSNN VYCFR+    KYSWVCETRS+   G R TSTMY+Q+Y     K+    N I A I +IR++IPVV++FRALGFV D++IL HI YD  D E+++RF++SLEEA VI+E+ +ALDFIG+RGS  N  +A RI+YA+ ILQKEMLPHVG E++ ET+KA+FLGY VHK+LMCSLGR  EDDRDHYG KRLDLAG L+ GLF  LF +L KDV+ +++ C++  K+FN+T AI+SR IT+GL+YSLATGNWG + +A++AGVSQVLNRLTYA+SLSHLRRLNTPLGREGKQA+PRQLHN+HWGM+CPAETPEG AVGLVKNLALMAYIS  SP  PILE L E+ TE L+E  P  I  P  T+IF NGNWVG+HR+P  L++ L   RR  DI  +VS+I  +  +ELRIYTDAGRV RPLF+VE    +L ++K  + +L   K  +Y + NLL DG+VE IDTEEEE CM+AM+P D+   GS + +THCEIHPSMILG+ AS+IPFPDHNQSPRNTYQSAMGKQAMG+Y S ++ RMDTMA+VL+YPQ+PLVTT+AMEYL FRELPSG NA+V I  Y+GYNQEDSLIMNQSAIDRGFFRS+FYRCY D+E+ +        G    + E FE P+R+   G+R GSY  LD DGL  PG RV+G DI+IGKTSP+  S       R  K+D ST++R+ E+GI+D V+LTTN  GFKF KVR RN+RIPQIGDKF+SRHGQKGTIGMTYRQEDMPFT +GITPDIIVNPHAIPSRMT+G LVECL GKVSS  G EGD T F T +TV  +A  LH+LGYQ+HGNE ++SG TGR+LTA+IFIGPTFYQRLKH+VDDKIHSR+RGPV MLTRQP+EGR R+GGLRMGEMERDCLISHG+A F+ DRLF NSD YRVHVCD+CG+IA ANLR   F C +C+ K +ISQ+ +PY+CKLLFQELM+M IAPR+FT
Sbjct:   10 DTERDDA-GDMGLSA-GSAVSQEDAWAVISSYFEEKGLVRQQLDSFDEFIQNTMQELVDDSRSIRINPEAQYAPGQAKTNTDTIYNISFGQIYLSKPTMTEADGSTSVMFPHEARLRNLTYSAPLYVDVVCQKYQAPASGPANLEDMEPYDQVETPKEFIGMVPIMLRSQYCVLTHKTDKELTELNECVYDQGGYFIINGSEKVLIAQERMSNNHVYCFRKNAASKYSWVCETRSHVEHGVRPTSTMYVQMYQKSGGKSAITGNQIRAVIPYIRQDIPVVIIFRALGFVADREILEHICYDFSDAELMERFKSSLEEAFVIQEQEVALDFIGRRGSAINVSKADRIRYAQDILQKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRIGEDDRDHYGNKRLDLAGPLLGGLFRILFKKLTKDVKSFLQKCVDNGKDFNLTLAIRSRTITNGLRYSLATGNWGMQKSASKAGVSQVLNRLTYASSLSHLRRLNTPLGREGKQAQPRQLHNTHWGMICPAETPEGQAVGLVKNLALMAYISVGSPQAPILEFLEEWATENLEEIKPQII--PHSTKIFVNGNWVGVHREPNELIRTLRSLRRCVDIDAEVSVIRDLMNKELRIYTDAGRVCRPLFIVED--NQLLLQKEQVVKLQNHKITNYCWHNLLTDGVVELIDTEEEEVCMIAMEPKDVG-TGS-QIHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYCSNFRARMDTMANVLNYPQKPLVTTRAMEYLHFRELPSGINAIVGIASYTGYNQEDSLIMNQSAIDRGFFRSTFYRCYIDQERNKSPHGGPGGGAGGANCEEFEKPSRENCLGLRHGSYHKLDNDGLVAPGTRVSGNDIIIGKTSPLPQSEDSSLEQRHQKRDASTALRSHENGIIDSVMLTTNADGFKFTKVRFRNIRIPQIGDKFASRHGQKGTIGMTYRQEDMPFTVEGITPDIIVNPHAIPSRMTVGHLVECLLGKVSSQTGDEGDATPF-TDVTVQAIADTLHNLGYQKHGNEVMYSGHTGRRLTAQIFIGPTFYQRLKHMVDDKIHSRSRGPVTMLTRQPMEGRAREGGLRMGEMERDCLISHGSANFLMDRLFANSDAYRVHVCDICGIIAIANLRKMTFECRTCRNKTQISQVHIPYSCKLLFQELMAMSIAPRLFT 1190          
The following BLAST results are available for this feature:
BLAST of EWM29030.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111548|gb|EWM29030.1|0.000e+0100.00dna-directed rna polymerase ii subunit rpb2 [Nanno... [more]
gi|813157781|ref|XP_012202239.1|0.000e+063.82DNA-directed RNA polymerase II subunit RPB2 [Sapro... [more]
gi|698794892|ref|XP_009830475.1|0.000e+063.76hypothetical protein H257_06806 [Aphanomyces astac... [more]
gi|669154024|ref|XP_008612574.1|0.000e+063.73DNA-directed RNA polymerase II subunit RPB2 [Sapro... [more]
gi|1173942543|gb|OQR91522.1|0.000e+063.90DNA-directed RNA polymerase II [Achlya hypogyna][more]
gi|673041019|ref|XP_008874470.1|0.000e+063.87hypothetical protein H310_10011 [Aphanomyces invad... [more]
gi|1214696920|gb|OWZ10318.1|0.000e+063.11DNA-directed RNA polymerase II [Phytophthora megak... [more]
gi|301101902|ref|XP_002900039.1|0.000e+062.86DNA-directed RNA polymerase II 135 kDa polypeptide... [more]
gi|953486038|emb|CEG50216.1|0.000e+063.11dna-directed rna polymerase ii 135 kda polypeptide... [more]
gi|675162763|ref|XP_008890266.1|0.000e+062.94hypothetical protein PPTG_00604 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1636rna1636Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications