EWM29068.1, cds1595 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29068.1 vs. NCBI_GenBank
Match: gi|585111586|gb|EWM29067.1| (succinate dehydrogenase flavoprotein subunit [Nannochloropsis gaditana]) HSP 1 Score: 1207.2 bits (3122), Expect = 0.000e+0 Identity = 577/577 (100.00%), Postives = 577/577 (100.00%), Query Frame = 0
Query: 1 MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 577
MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY
Sbjct: 71 MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 647
BLAST of EWM29068.1 vs. NCBI_GenBank
Match: gi|585111587|gb|EWM29068.1| (succinate dehydrogenase flavoprotein subunit [Nannochloropsis gaditana]) HSP 1 Score: 1203.35 bits (3112), Expect = 0.000e+0 Identity = 577/577 (100.00%), Postives = 577/577 (100.00%), Query Frame = 0
Query: 1 MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 577
MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY
Sbjct: 1 MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 577
BLAST of EWM29068.1 vs. NCBI_GenBank
Match: gi|676390327|ref|XP_009038442.1| (hypothetical protein AURANDRAFT_37947 [Aureococcus anophagefferens] >gi|323450812|gb|EGB06691.1| hypothetical protein AURANDRAFT_37947 [Aureococcus anophagefferens]) HSP 1 Score: 978.008 bits (2527), Expect = 0.000e+0 Identity = 467/574 (81.36%), Postives = 512/574 (89.20%), Query Frame = 0
Query: 5 EAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGS-LDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 577
EAGFKTACVTKLFPTRSHTVAAQGGINAALGNM+EDDW+WHMYDTVKGSDWLGDQDAIHYMCREAP+AV ELES+GLPFSRT+DGKIYQRAFGGQSL YGKGGQAYRC AADRTGHAMLHTLYGRSLAF+TTYF+EYFALDLIMD +G CVGI A+NMEDGTLHRI+A+NTVLATGGYGRAYFSCTSAHTCTGDGNAM LRAGL EDPEFVQFHPTGIYGAGCLITEGCRGEGGILRN+EGERFMERYAP+AKDLASRDVVSRAMTMEIREGRGVGK+ DH +LHLDHLP +LLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNH GEVI DGS +D D V+PGLFAAGEAACASVHGANRLGANSLLDIVVFGRA ALRIADIA+PG VPP+PADA ++++ D+D +RF+SG TA +RK MQKTMQ+HAAVYRT +SLAEG KI + + + D+ VTDRSL+WNTDLIE++ELRNLL NAATTM+AAEARKESRGAHARED +R D WM HT+ FD T+KTT++YRP+H TLD +E VPP RVY
Sbjct: 56 EAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWKWHMYDTVKGSDWLGDQDAIHYMCREAPQAVLELESFGLPFSRTDDGKIYQRAFGGQSLDYGKGGQAYRCCAAADRTGHAMLHTLYGRSLAFDTTYFLEYFALDLIMDDEGSCVGIVAINMEDGTLHRINASNTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGLAAEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKDADHCYLHLDHLPAELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHLGEVIRQVTGPDGSVIDHDEVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAEPGAPVPPLPADAAEKTIADVDAIRFSSGPRPTADVRKDMQKTMQDHAAVYRTAESLAEGCEKIQKNVEAFADIGVTDRSLIWNTDLIETIELRNLLPNAATTMFAAEARKESRGAHAREDTPDRLDDEWMKHTMCYFDEATNKTTVTYRPIHYETLDADECPVVPPVARVY 629
BLAST of EWM29068.1 vs. NCBI_GenBank
Match: gi|698779553|ref|XP_009822820.1| (succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Aphanomyces astaci] >gi|574122481|gb|ETV87957.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Aphanomyces astaci]) HSP 1 Score: 968.763 bits (2503), Expect = 0.000e+0 Identity = 458/577 (79.38%), Postives = 512/577 (88.73%), Query Frame = 0
Query: 4 AEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSLD---PDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 577
AEAGFKTAC+TKLFPTRSHTVAAQGGINAAL NMTEDDWRWHMYDTVKGSDWLGDQDAIHYMC+EAPRAV ELE+YGLPFSRT++GKIYQRAFGGQSL YGKGGQAYRCACAADRTGHAMLHTLYGRSLAF+T YFIEYFALDLIM+ +G C G+ ALNMEDGT+HR H NNTVLATGGYGRAYFSCTSAHTCTGDG M LRAG+P++DPEFVQFHPTGIYGAGCLITEG RGEGGILRN+EGERFMERYAP+AKDLASRDVVSRAMTMEIREGRGVGKEKDH++LHLDHLPP+LLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTN+FGEV+ P ++ PD V+ GLFAAGEAA ASVHGANRLGANSLLDIVVFGRA ALRIADI+KPG+ P+P +AG +S+ +D +R+A+G+ TA +R +MQKTMQ AAVYRTQ++LAEG VKID + ++D++VTDRSL+WNTDLIE++EL+NLL+ A+ TM+ AEARKESRGAHAREDFS RDD NWM HT+A D +T KT I+YRPVH HTLDE+E K V P RVY
Sbjct: 52 AEAGFKTACITKLFPTRSHTVAAQGGINAALANMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPRAVLELEAYGLPFSRTDEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTEYFIEYFALDLIMNDEGECCGVIALNMEDGTIHRFHTNNTVLATGGYGRAYFSCTSAHTCTGDGTGMALRAGIPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKEKDHIYLHLDHLPPELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYFGEVVVPDTTGLPDVNKTYPDKVVKGLFAAGEAASASVHGANRLGANSLLDIVVFGRAAALRIADISKPGEAKRPLPRNAGDQSLHMVDTIRYANGAIPTAELRLEMQKTMQSDAAVYRTQETLAEGVVKIDAITPKFKDIQVTDRSLIWNTDLIETIELKNLLACASATMHGAEARKESRGAHAREDFSARDDVNWMKHTLAYHDDETTKTHIAYRPVHYHTLDEDECKTVAPVARVY 628
BLAST of EWM29068.1 vs. NCBI_GenBank
Match: gi|219113829|ref|XP_002186498.1| (succinate dehydrogenase flavoprotein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209583348|gb|ACI65968.1| succinate dehydrogenase flavoprotein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 968.378 bits (2502), Expect = 0.000e+0 Identity = 454/577 (78.68%), Postives = 505/577 (87.52%), Query Frame = 0
Query: 1 MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 577
MG +EAGFKTACVTKLFPTRSHTVAAQGGINAALGNM EDDWRWHMYDTVKGSDWLGDQDAIHYMCREAP+AV ELE +G+PFSRTE+GKIYQRAFGGQSL +GKGGQAYRCA AADRTGHAMLHTLYGRSLAF+TTYFIEYFA+DL+M+ G CVG+ ALNMEDGT+HRIHA NTVLATGGYGR YFSCTSAHTCTGDGNAM +R GL +D EFVQFHPTGIYGAGCLITEGCRGEGGILRN+EGERFMERYAP+AKDLASRDVVSR+MTMEIREGRG G +KDH++LHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNH+GEVI K DG+ D V+PGLFA+GE+ACASVHGANRLGANSLLDIVVFGRA A RIA+IAKPGDK+ P+D G S+ +LDK+R+A G TA IR +MQ MQEHAAVYRT +LAEGK ID V+ ++D+ VTD+SL+WNTDL+E+LELRNLL+ A+TTMY AE RKESRGAHA ED+ RDD NWM HT++ FD T +T I YRP+H +TLDE+E K VPP RVY
Sbjct: 62 MGLSEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMGEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPKAVLELEEFGMPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGRSLAFDTTYFIEYFAMDLLMNDQGECVGVVALNMEDGTIHRIHAKNTVLATGGYGRTYFSCTSAHTCTGDGNAMAMRQGLSNQDNEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTMEIREGRGAGPKKDHIYLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVIRTKFDKDGNFSKDEVVPGLFASGESACASVHGANRLGANSLLDIVVFGRACANRIAEIAKPGDKIADGPSDVGFGSIAELDKLRYAEGHATTADIRSEMQSVMQEHAAVYRTTQTLAEGKTAIDGVVDKFKDIAVTDKSLVWNTDLVETLELRNLLACASTTMYGAENRKESRGAHAHEDYPTRDDENWMKHTLSYFDESTGRTEIKYRPIHYYTLDEDECKTVPPVARVY 638
BLAST of EWM29068.1 vs. NCBI_GenBank
Match: gi|673032278|ref|XP_008870100.1| (succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Aphanomyces invadans] >gi|574474100|gb|ETW01102.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Aphanomyces invadans]) HSP 1 Score: 965.681 bits (2495), Expect = 0.000e+0 Identity = 456/577 (79.03%), Postives = 512/577 (88.73%), Query Frame = 0
Query: 4 AEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSLD---PDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 577
AEAGFKTAC+TKLFPTRSHTVAAQGGINAAL NMTEDDWRWHMYDTVKGSDWLGDQDAIHYMC+EAPRAV ELE+YGLPFSRT++GKIYQRAFGGQSL+YGKGGQAYRCACAADRTGHAMLHTLYGRSLAF+T YFIEYFALDLIM+ G C G+ ALNMEDGT+HR H NNTVLATGGYGRAYFSCTSAHTCTGDG M LRAG+P++DPEFVQFHPTGIYGAGCLITEG RGEGGILRN+EGERFMERYAP+AKDLASRDVVSRAMTMEIREGRGVGKEKDH++LHLDHLPP+LLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNH+GEV+ P ++ PD VI GLFAAGEAA ASVHGANRLGANSLLDIVVFGRA ALRIA+I+KPG+ P+P +AG++S+ +D +R+A+G+ TA +R +MQKTMQ AAVYRTQ++LAEG KID + ++D++VTDRSL+WNTDLIE++EL+NLL+ A+ TM+ AEARKESRGAHAREDFS RDD NWM HT+A D ++ KT I+YRPVH HTLDE+E K V P RVY
Sbjct: 52 AEAGFKTACITKLFPTRSHTVAAQGGINAALANMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPRAVLELEAYGLPFSRTDEGKIYQRAFGGQSLQYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTEYFIEYFALDLIMNDQGECCGVIALNMEDGTIHRFHTNNTVLATGGYGRAYFSCTSAHTCTGDGTGMALRAGIPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKEKDHIYLHLDHLPPELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVMPDTSGLPDVNKTYPDKVIKGLFAAGEAASASVHGANRLGANSLLDIVVFGRAAALRIAEISKPGEAKRPLPRNAGEQSLHMVDSIRYANGAIPTAELRLEMQKTMQSDAAVYRTQETLAEGVQKIDAITPKFKDIRVTDRSLIWNTDLIETIELKNLLACASATMHGAEARKESRGAHAREDFSARDDVNWMKHTLAYHDDESTKTHIAYRPVHYHTLDEDECKTVAPVARVY 628
BLAST of EWM29068.1 vs. NCBI_GenBank
Match: gi|813192166|ref|XP_012207965.1| (succinate dehydrogenase flavoprotein subunit [Saprolegnia parasitica CBS 223.65] >gi|641526989|gb|KDO21309.1| succinate dehydrogenase flavoprotein subunit [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 962.985 bits (2488), Expect = 0.000e+0 Identity = 453/577 (78.51%), Postives = 508/577 (88.04%), Query Frame = 0
Query: 4 AEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKA---DGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 577
AEAG KTAC+TKLFPTRSHTVAAQGGINAAL NMTEDDWRWHMYDTVKGSDWLGDQDAIHYMC+EAPRAV ELE+YGLPFSRT+DGKIYQRAFGGQSL YGKGGQAYRCACAADRTGHAMLHTLYGRSLAF+T+YFIEYFALDLIM+ G C G+ A+NMEDG++HR H NNTVLATGGYGRAYFSCTSAHTCTGDG M +RAG+P++DPEFVQFHPTGIYGAGCLITEG RGEGGILRN+EGERFMERYAP+AKDLASRDVVSRAMTMEIREGRGVG EKDH++LHLDHLP +LLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEV+ P + PD V+ GLFAAGEAACASVHGANRLGANSLLDIVVFGRA ALRIA+I+KPG+ PMPA+AG+ S+ +D +R+A+G+ TA +R +MQKTMQ AAVYRTQ++LAEG KID+++ ++D+KVTDRSL+WNTDLIE++EL+NLL+ A+ TM+ AEARKESRGAHAREDFS RDD NWM HT+A + + T I+YRPVH HTLDE E K V P RVY
Sbjct: 56 AEAGLKTACITKLFPTRSHTVAAQGGINAALANMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPRAVLELEAYGLPFSRTDDGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTSYFIEYFALDLIMNDAGECCGVIAMNMEDGSIHRFHTNNTVLATGGYGRAYFSCTSAHTCTGDGTGMAIRAGIPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGNEKDHIYLHLDHLPAELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVVIPDTTGLPDANQMYPDKVVKGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGEAKRPMPANAGEASLSMVDSLRYANGAIPTADLRLEMQKTMQNDAAVYRTQETLAEGVQKIDKIVPKFKDIKVTDRSLIWNTDLIETIELKNLLACASATMHGAEARKESRGAHAREDFSTRDDVNWMKHTLAYHNTEEGTTHIAYRPVHYHTLDEEECKTVAPVARVY 632
BLAST of EWM29068.1 vs. NCBI_GenBank
Match: gi|568029728|gb|ETM03646.1| (succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica]) HSP 1 Score: 962.6 bits (2487), Expect = 0.000e+0 Identity = 459/577 (79.55%), Postives = 504/577 (87.35%), Query Frame = 0
Query: 4 AEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKA---DGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 577
AEAG KTAC++KLFPTRSHTVAAQGGINAALGNM+EDDWRWHMYDTVKGSDWLGDQDAIHYMCREAP AV ELE +GLPFSRTE+GKIYQR FGGQSL++GKGGQA R ACAADRTGHAMLHTLYGRSLAF+T+YFIEYFALDLIM+ G CVG+ A NMEDGT HR H NNTVLATGGYGRAYFSCTSAHTCTGDG M LRAG+P++DPEFVQFHPTGIYGAGCLITEG RGEGGILRN+EGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGK KDH+FLHLDHLPP+LL ERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGI TNH GEV+ P G L PD ++PGLFAAGEAACASVHGANRLGANSLLD+VVFGRA ALRIA++ KPG+K PMP D G +++ED+DK+R+A GS +TA +R +MQKTMQ AAVYRTQ+SL GK KIDEV+ + D+KVTDRSL+WNTDL E+LELRNLL+ A+ TM+ AEARKESRGAHAREDF+ERDD NWM HT+A D D KT I+YR V TLDENE K VPPF RVY
Sbjct: 70 AEAGLKTACISKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPEAVRELEDFGLPFSRTEEGKIYQRPFGGQSLEFGKGGQARRTACAADRTGHAMLHTLYGRSLAFDTSYFIEYFALDLIMNDAGECVGVMAFNMEDGTFHRFHTNNTVLATGGYGRAYFSCTSAHTCTGDGTGMALRAGIPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKNKDHIFLHLDHLPPELLHERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIATNHMGEVVVPDVDGLPEPGKLYPDKIVPGLFAAGEAACASVHGANRLGANSLLDLVVFGRACALRIAELTKPGEKKRPMPKDGGLKAIEDVDKLRYADGSISTAELRLEMQKTMQVDAAVYRTQESLEAGKEKIDEVVPKFNDIKVTDRSLIWNTDLTETLELRNLLACASCTMHGAEARKESRGAHAREDFTERDDVNWMKHTVAYHD-DEGKTHIAYRAVQDQTLDENECKHVPPFARVY 645
BLAST of EWM29068.1 vs. NCBI_GenBank
Match: gi|675161755|ref|XP_008889762.1| (succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica INRA-310] >gi|566034620|gb|ETI57531.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica P1569] >gi|567972279|gb|ETK97267.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica] >gi|568000605|gb|ETL50618.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica] >gi|568060415|gb|ETM56947.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica] >gi|568108971|gb|ETN23578.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica INRA-310] >gi|570338328|gb|ETO86276.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica P1976] >gi|570962322|gb|ETP27301.1| succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Phytophthora parasitica CJ01A1] >gi|970644831|gb|KUF85516.1| Succinate dehydrogenase flavoprotein subunit [Phytophthora nicotianae] >gi|970651460|gb|KUF90274.1| hypothetical protein AM588_10002730 [Phytophthora nicotianae]) HSP 1 Score: 962.6 bits (2487), Expect = 0.000e+0 Identity = 459/577 (79.55%), Postives = 504/577 (87.35%), Query Frame = 0
Query: 4 AEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKA---DGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 577
AEAG KTAC++KLFPTRSHTVAAQGGINAALGNM+EDDWRWHMYDTVKGSDWLGDQDAIHYMCREAP AV ELE +GLPFSRTE+GKIYQR FGGQSL++GKGGQA R ACAADRTGHAMLHTLYGRSLAF+T+YFIEYFALDLIM+ G CVG+ A NMEDGT HR H NNTVLATGGYGRAYFSCTSAHTCTGDG M LRAG+P++DPEFVQFHPTGIYGAGCLITEG RGEGGILRN+EGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGK KDH+FLHLDHLPP+LL ERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGI TNH GEV+ P G L PD ++PGLFAAGEAACASVHGANRLGANSLLD+VVFGRA ALRIA++ KPG+K PMP D G +++ED+DK+R+A GS +TA +R +MQKTMQ AAVYRTQ+SL GK KIDEV+ + D+KVTDRSL+WNTDL E+LELRNLL+ A+ TM+ AEARKESRGAHAREDF+ERDD NWM HT+A D D KT I+YR V TLDENE K VPPF RVY
Sbjct: 70 AEAGLKTACISKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPEAVRELEDFGLPFSRTEEGKIYQRPFGGQSLEFGKGGQARRTACAADRTGHAMLHTLYGRSLAFDTSYFIEYFALDLIMNDAGECVGVMAFNMEDGTFHRFHTNNTVLATGGYGRAYFSCTSAHTCTGDGTGMALRAGIPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKNKDHIFLHLDHLPPELLHERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIATNHMGEVVVPDVDGLPEPGKLYPDKIVPGLFAAGEAACASVHGANRLGANSLLDLVVFGRACALRIAELTKPGEKKRPMPKDGGLKAIEDVDKLRYADGSISTAELRLEMQKTMQVDAAVYRTQESLEAGKEKIDEVVPKFNDIKVTDRSLIWNTDLTETLELRNLLACASCTMHGAEARKESRGAHAREDFTERDDVNWMKHTVAYHD-DEGKTHIAYRAVQDQTLDENECKHVPPFARVY 645
BLAST of EWM29068.1 vs. NCBI_GenBank
Match: gi|1173958104|gb|OQS04518.1| (succinate dehydrogenase flavoprotein [Thraustotheca clavata]) HSP 1 Score: 961.444 bits (2484), Expect = 0.000e+0 Identity = 451/577 (78.16%), Postives = 511/577 (88.56%), Query Frame = 0
Query: 4 AEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKA---DGSLDPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 577
AEAG KTAC+TKLFPTRSHTVAAQGGINAAL NMTEDDWRWHMYDTVKGSDWLGDQDAIHYMC+EAPRAV ELE+YGLPFSRT++GKIYQRAFGGQSL +GKGGQAYRCACAADRTGHAMLHTLYGRSLAF+T+YFIEYFALDLIM+ G C G+ A+NMEDGT+HR H NNTVLATGGYGRAYFSCTSAHTCTGDG M +RAG+P++DPEFVQFHPTGIYGAGCLITEG RGEGGILRN+EGERFMERYAP+AKDLASRDVVSRAMTMEIREGRGVG+EKDH++LHLDHLP +LLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNH+GEV+ P A ++ PD V+ GLFAAGEAA ASVHGANRLGANSLLDIVVFGRA ALRIA+I+KPG+ P+P++AG+ S+ +D +R+A+G TA +R +MQKTMQ AAVYRTQ++L EG KID+++ ++D+KVTDRSL+WNTDLIE++EL+NLL+ AA+TM+ AEARKESRGAHAREDF+ RDD NWM HT+A D + T I+YRPVH HTLDENE K VPP RVY
Sbjct: 56 AEAGLKTACITKLFPTRSHTVAAQGGINAALANMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPRAVLELEAYGLPFSRTDEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTSYFIEYFALDLIMNDAGECCGVVAMNMEDGTIHRFHTNNTVLATGGYGRAYFSCTSAHTCTGDGTGMAIRAGIPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGREKDHIYLHLDHLPAELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHYGEVVVPDSSAAPDANNMYPDKVVKGLFAAGEAASASVHGANRLGANSLLDIVVFGRACALRIAEISKPGEAKRPLPSNAGEASLNMVDSLRYANGQIPTAELRLEMQKTMQNDAAVYRTQETLEEGVQKIDKIVPKFKDIKVTDRSLIWNTDLIETIELKNLLACAASTMHGAEARKESRGAHAREDFATRDDQNWMKHTLAYHDTEEGTTRITYRPVHYHTLDENECKTVPPVARVY 632 The following BLAST results are available for this feature:
BLAST of EWM29068.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|