EWM29103.1, cds1577 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29103.1 vs. NCBI_GenBank
Match: gi|585111622|gb|EWM29103.1| (glutathione peroxidase [Nannochloropsis gaditana]) HSP 1 Score: 513.457 bits (1321), Expect = 0.000e+0 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0 Query: 1 MSFDTCKQMHFSGRCIAALATSSLALSNSISLARSRSSPAFVSTRAVSLLATQLSASSSSHSRHLSTKMSAASSLYDFTVKDANGQDFNLGELKDKKAVLVVNVASQCGFTPQYKGLQELQDKYGPKGFTVLAFPCNQFGGQEPDAAPQVCQFAKDRFKATFPIMDKVDVNGNNAAPVFNFLKEQQPGFLTNAVKWNFSKWLIKDGKPIKRYGPQEKPESIEKDVPQGLRLCPLNGVGEGGGITQMDG 248 MSFDTCKQMHFSGRCIAALATSSLALSNSISLARSRSSPAFVSTRAVSLLATQLSASSSSHSRHLSTKMSAASSLYDFTVKDANGQDFNLGELKDKKAVLVVNVASQCGFTPQYKGLQELQDKYGPKGFTVLAFPCNQFGGQEPDAAPQVCQFAKDRFKATFPIMDKVDVNGNNAAPVFNFLKEQQPGFLTNAVKWNFSKWLIKDGKPIKRYGPQEKPESIEKDVPQGLRLCPLNGVGEGGGITQMDG Sbjct: 1 MSFDTCKQMHFSGRCIAALATSSLALSNSISLARSRSSPAFVSTRAVSLLATQLSASSSSHSRHLSTKMSAASSLYDFTVKDANGQDFNLGELKDKKAVLVVNVASQCGFTPQYKGLQELQDKYGPKGFTVLAFPCNQFGGQEPDAAPQVCQFAKDRFKATFPIMDKVDVNGNNAAPVFNFLKEQQPGFLTNAVKWNFSKWLIKDGKPIKRYGPQEKPESIEKDVPQGLRLCPLNGVGEGGGITQMDG 248
BLAST of EWM29103.1 vs. NCBI_GenBank
Match: gi|37930463|gb|AAP69867.1| (glutathione peroxidase 1 [Lotus japonicus]) HSP 1 Score: 187.578 bits (475), Expect = 8.252e-56 Identity = 109/235 (46.38%), Postives = 147/235 (62.55%), Query Frame = 0 Query: 6 CKQMHFSGRCI---AALATSSL---ALSNS-ISLARSRSSPAFVSTR--AVSLLATQLSASSSSHSRHLSTKMSAASSLYDFTVKDANGQDFNLGELKDKKAVLVVNVASQCGFT-PQYKGLQELQDKYGPKGFTVLAFPCNQFGGQEPDAAPQVCQFAKDRFKATFPIMDKVDVNGNNAAPVFNFLKEQQPGFLTNAVKWNFSKWLI-KDGKPIKRYGPQEKPESIEKDVPQGL 229 C ++ F R I A L++SSL SNS I+L+RS S +T SL++T S + S + M+A +S+YDFTVKDA G D NLG+ K K +L+VNVASQCG T Y L +L +KY KG +L FPCNQFG QEP Q+ +F RFKA FP+ DKVDVNG++AAP++ +LK + G + +KWNFSK+L+ K+G ++RY P P SIEKD+ + L Sbjct: 3 CTRILFFSRTIRFAAPLSSSSLHSFVFSNSPITLSRSYHSSLLTTTSFPIKSLVST--STTPFSFTLRPDHTMAAPTSVYDFTVKDARGNDVNLGDYKGK-VLLIVNVASQCGLTNSNYTELSQLYEKYKSKGLEILGFPCNQFGAQEPGDNEQIQEFVCTRFKAEFPVFDKVDVNGDSAAPLYKYLKSSKGGLFGDKIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDLVKLL 234
BLAST of EWM29103.1 vs. NCBI_GenBank
Match: gi|242073970|ref|XP_002446921.1| (probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Sorghum bicolor] >gi|48374968|gb|AAT42166.1| putative glutathione peroxidase [Sorghum bicolor] >gi|241938104|gb|EES11249.1| hypothetical protein SORBI_3006G173900 [Sorghum bicolor] >gi|530278482|gb|AGT16461.1| phospholipid-hydroperoxide glutathione peroxidase [Saccharum hybrid cultivar R570] >gi|1068954338|gb|AOR16598.1| glutathione peroxidase [Saccharum arundinaceum] >gi|1070930327|gb|OEL20212.1| putative phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Dichanthelium oligosanthes]) HSP 1 Score: 184.882 bits (468), Expect = 1.446e-55 Identity = 89/162 (54.94%), Postives = 118/162 (72.84%), Query Frame = 0 Query: 70 SAASSLYDFTVKDANGQDFNLGELKDKKAVLVVNVASQCGFT-PQYKGLQELQDKYGPKGFTVLAFPCNQFGGQEPDAAPQVCQFAKDRFKATFPIMDKVDVNGNNAAPVFNFLKEQQPGFLTNAVKWNFSKWLI-KDGKPIKRYGPQEKPESIEKDVPQGL 229 S+A+S++DFTVKDA+G+D +L K K +L+VNVASQCG T Y L +L +KY +GF +LAFPCNQFGGQEP ++ QFA RFKA +PI DKVDVNGNNAAP++ FLK + G +++KWNFSK+L+ K+G+ + RY P P SIEKD+ + L Sbjct: 5 SSATSVHDFTVKDASGKDVDLSTYKGK-VLLIVNVASQCGLTNSNYTELAQLYEKYKDQGFEILAFPCNQFGGQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGNNAAPIYKFLKSSKGGLFGDSIKWNFSKFLVDKEGRVVDRYAPTTSPLSIEKDIKKLL 165
BLAST of EWM29103.1 vs. NCBI_GenBank
Match: gi|159470005|ref|XP_001693150.1| (glutathione peroxidase [Chlamydomonas reinhardtii] >gi|158277408|gb|EDP03176.1| glutathione peroxidase [Chlamydomonas reinhardtii]) HSP 1 Score: 184.882 bits (468), Expect = 3.235e-55 Identity = 91/158 (57.59%), Postives = 113/158 (71.52%), Query Frame = 0 Query: 73 SSLYDFTVKDANGQDFNLGELKDKKAVLVVNVASQCGFTPQYKGLQELQDKYGPKGFTVLAFPCNQFGGQEPDAAPQVCQFAKDRFKATFPIMDKVDVNGNNAAPVFNFLKEQQPGFLTNAVKWNFSKWLI-KDGKPIKRYGPQEKPESIEKDVPQGL 229 S Y F VKD +G++F L LKDK AVLVVN+AS CGFTPQY LQ+LQDKYG +GF VL FPCNQFG QEP + + QFAK + TFP+M KVDVNG A P+F++LK Q+ G LT+ +KWNFSK+LI K+G + RYG P S+E D+ + L Sbjct: 44 SEFYQFQVKDIDGKNFKLSSLKDK-AVLVVNLASACGFTPQYAELQDLQDKYGKQGFVVLGFPCNQFGAQEPGSNQTIKQFAKSNYGVTFPLMSKVDVNGPGAEPLFDWLKTQKGGLLTSDIKWNFSKFLINKEGDVVGRYGSTSSPLSLENDIKKAL 200
BLAST of EWM29103.1 vs. NCBI_GenBank
Match: gi|703130084|ref|XP_010104520.1| (Phospholipid hydroperoxide glutathione peroxidase 1 [Morus notabilis] >gi|587913304|gb|EXC01121.1| Phospholipid hydroperoxide glutathione peroxidase 1 [Morus notabilis]) HSP 1 Score: 186.037 bits (471), Expect = 4.246e-55 Identity = 93/168 (55.36%), Postives = 117/168 (69.64%), Query Frame = 0 Query: 60 SHSRHLSTKMSAASSLYDFTVKDANGQDFNLGELKDKKAVLVVNVASQCGFTP-QYKGLQELQDKYGPKGFTVLAFPCNQFGGQEPDAAPQVCQFAKDRFKATFPIMDKVDVNGNNAAPVFNFLKEQQPGFLTNAVKWNFSKWLI-KDGKPIKRYGPQEKPESIEKDV 225 S S + + + SLYDFTVKD +G+D +LG+ K K +L+VNVAS+CG TP Y L L +KY +GF +LAFPCNQFGGQEP + P++ QFA RFKA FPI DKVDVNG N APV+ FLK GFL + VKWNF K+L+ K+GK ++RY P P IEKD+ Sbjct: 64 SRSPGIYARAATEKSLYDFTVKDIDGKDVSLGKFKGK-VLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDVVKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDL 230
BLAST of EWM29103.1 vs. NCBI_GenBank
Match: gi|1072910352|ref|XP_018447003.1| (PREDICTED: probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Raphanus sativus]) HSP 1 Score: 185.652 bits (470), Expect = 4.985e-55 Identity = 98/195 (50.26%), Postives = 121/195 (62.05%), Query Frame = 0 Query: 37 SSPAFVSTRAVSLLATQLSASSSSHSRHLSTKMSAASSLYDFTVKDANGQDFNLGELKDKKAVLVVNVASQCGFT-PQYKGLQELQDKYGPKGFTVLAFPCNQFGGQEPDAAPQVCQFAKDRFKATFPIMDKVDVNGNNAAPVFNFLKEQQPGFLTNAVKWNFSKWLI-KDGKPIKRYGPQEKPESIEKDVPQGL 229 + P F S R V L T S S HS S S S+YDFTVKDA G D +L K K +L+VNVASQCG T Y L +L KY GF +LAFPCNQFG QEP + ++ QFA RFKA +PI DKVDVNG+ AAP++ FLK + G + +KWNF+K+L+ KDG + RY P P SIEKD+ + L Sbjct: 43 AKPLFTSHRQVPLSTTGAKLSKSEHSMATS---SEPKSIYDFTVKDAKGNDVDLSTYKGK-VLLIVNVASQCGLTNSNYTELAQLYQKYKDHGFEILAFPCNQFGNQEPGSNEEIVQFACTRFKAEYPIFDKVDVNGDTAAPIYKFLKSSKGGLFGDGIKWNFAKFLVDKDGNVVDRYAPTTSPLSIEKDLKKLL 233
BLAST of EWM29103.1 vs. NCBI_GenBank
Match: gi|290995873|ref|XP_002680507.1| (predicted protein [Naegleria gruberi] >gi|284094128|gb|EFC47763.1| predicted protein [Naegleria gruberi]) HSP 1 Score: 182.956 bits (463), Expect = 5.536e-55 Identity = 84/163 (51.53%), Postives = 116/163 (71.17%), Query Frame = 0 Query: 69 MSAASSLYDFTVKDANGQDFNLGELKDKKAVLVVNVASQCGFTPQYKGLQELQDKYGPKGFTVLAFPCNQFGGQEPDAAPQVCQFAKDRFKATFPIMDKVDVNGNNAAPVFNFLKEQQPGFLTNAVKWNFSKWLI-KDGKPIKRYGPQEKPESIEKDVPQGLR 230 MS S Y FTVKDA+ D ++ + K K V++VNVAS+CGFT QY +QE+ +KY +GF VLAFPCNQFG QEP ++C FA+ +FK TF I DK++VNG+ P++NFLK++ GFL +AVKWNF+K+L+ K GK +KRY P P+ +E D+ + L+ Sbjct: 1 MSTDSDFYSFTVKDADLNDVSMADYKGK-VVMIVNVASRCGFTKQYDEIQEVYNKYKDQGFEVLAFPCNQFGSQEPGTNEEICTFARTKFKVTFKIFDKINVNGSETIPLYNFLKKEGAGFLVDAVKWNFTKFLVSKSGKVLKRYAPNTSPKDMEDDIQKLLK 162
BLAST of EWM29103.1 vs. NCBI_GenBank
Match: gi|1002263182|ref|XP_015635940.1| (PREDICTED: probable phospholipid hydroperoxide glutathione peroxidase [Oryza sativa Japonica Group] >gi|21360380|gb|AAM47493.1| glutathione peroxidase 1 [Oryza sativa] >gi|113565095|dbj|BAF15438.1| Os04g0556300 [Oryza sativa Japonica Group] >gi|215693018|dbj|BAG88438.1| unnamed protein product [Oryza sativa Japonica Group] >gi|222629338|gb|EEE61470.1| hypothetical protein OsJ_15735 [Oryza sativa Japonica Group] >gi|937915513|dbj|BAS90432.1| Os04g0556300 [Oryza sativa Japonica Group]) HSP 1 Score: 183.341 bits (464), Expect = 5.698e-55 Identity = 88/161 (54.66%), Postives = 118/161 (73.29%), Query Frame = 0 Query: 71 AASSLYDFTVKDANGQDFNLGELKDKKAVLVVNVASQCGFT-PQYKGLQELQDKYGPKGFTVLAFPCNQFGGQEPDAAPQVCQFAKDRFKATFPIMDKVDVNGNNAAPVFNFLKEQQPGFLTNAVKWNFSKWLI-KDGKPIKRYGPQEKPESIEKDVPQGL 229 +A+S++DFTVKDA+G+D NL K K +L+VNVASQCG T Y L +L +KY +GF +LAFPCNQFGGQEP + ++ QFA RFKA +PI DKVDVNGNNAAP++ +LK + G +++KWNFSK+L+ K+G+ + RY P P SIEKD+ + L Sbjct: 6 SATSVHDFTVKDASGKDVNLSTYKGK-VLLIVNVASQCGLTNSNYTELSQLYEKYKVQGFEILAFPCNQFGGQEPGSNEEIVQFACTRFKAEYPIFDKVDVNGNNAAPLYKYLKSNKGGLFGDSIKWNFSKFLVDKEGRVVDRYAPTTSPLSIEKDIKKLL 165
BLAST of EWM29103.1 vs. NCBI_GenBank
Match: gi|659073789|ref|XP_008437254.1| (PREDICTED: probable phospholipid hydroperoxide glutathione peroxidase [Cucumis melo]) HSP 1 Score: 184.496 bits (467), Expect = 1.775e-54 Identity = 98/189 (51.85%), Postives = 127/189 (67.20%), Query Frame = 0 Query: 44 TRAVSLLATQLSASSSSHSRHLSTKMS-AASSLYDFTVKDANGQDFNLGELKDKKAVLVVNVASQCGFT-PQYKGLQELQDKYGPKGFTVLAFPCNQFGGQEPDAAPQVCQFAKDRFKATFPIMDKVDVNGNNAAPVFNFLKEQQPGFLTNAVKWNFSKWLI-KDGKPIKRYGPQEKPESIEKDVPQGL 229 TR VS + ++ S +S +R T + + +S++DFTVKDA G D +L K K +L+VNVASQCG T Y L +L +KY GF +LAFPCNQFGGQEP + ++ QFA RFKA +PI DKVDVNGNNAAP++ FLK + G +A+KWNFSK+L+ KDG + RY P P SIEKDV + L Sbjct: 51 TRFVSPINSRSSLIASFLTRLDHTMATPSKTSVHDFTVKDAKGNDVDLSAYKGK-VLLIVNVASQCGLTNSNYTELSQLYEKYKGHGFEILAFPCNQFGGQEPGSNEEIVQFACTRFKAEYPIFDKVDVNGNNAAPLYKFLKSSKGGLFGDAIKWNFSKFLVDKDGNVVDRYAPTTSPLSIEKDVKKLL 238
BLAST of EWM29103.1 vs. NCBI_GenBank
Match: gi|743852899|ref|XP_011029376.1| (PREDICTED: LOW QUALITY PROTEIN: probable phospholipid hydroperoxide glutathione peroxidase, partial [Populus euphratica]) HSP 1 Score: 184.111 bits (466), Expect = 1.964e-54 Identity = 103/220 (46.82%), Postives = 133/220 (60.45%), Query Frame = 0 Query: 18 ALATSSLALSNSISLARSRSSPAFVSTRAVSLLATQLSASSSS------HSRHLSTKMSAASSLYDFTVKDANGQDFNLGELKDKKAVLVVNVASQCGFT-PQYKGLQELQDKYGPKGFTVLAFPCNQFGGQEPDAAPQVCQFAKDRFKATFPIMDKVDVNGNNAAPVFNFLKEQQPGFLTNAVKWNFSKWLI-KDGKPIKRYGPQEKPESIEKDVPQGL 229 AL +S LS +S R+ + + VSL++ L +S H S+A S++DFTVKDA G D +L K K +L+VNVASQCG T Y L +L DKY +G +LAFPCNQFG QEP Q+ +FA RFKA +PI DKVDVNG NAAP++ FLK + G +++KWNFSK+L+ KDGK + RY P P SIEKDV + L Sbjct: 14 ALNVASFLLSKLLSFNSXRTLSSSLHNSPVSLISLSLXTENSRPLLGNLRFNHSVASQSSAQSVHDFTVKDARGNDVDLSIYKGK-VLLIVNVASQCGLTNSNYTELTQLYDKYKDQGLDILAFPCNQFGSQEPGNNEQIVEFACTRFKADYPIFDKVDVNGKNAAPIYKFLKSSKGGLFGDSIKWNFSKFLVDKDGKVVDRYAPTTSPLSIEKDVKKLL 232 The following BLAST results are available for this feature:
BLAST of EWM29103.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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