EWM29097.1, cds1576 (CDS) Nannochloropsis gaditana

Overview
NameEWM29097.1
Unique Namecds1576
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:985540..985755 -
Alignment locationCM002457.1:985107..985309 -
Alignment locationCM002457.1:984408..984981 -
Alignment locationCM002457.1:984117..984302 -
Alignment locationCM002457.1:983966..984061 -

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Properties
Property NameValue
Protein idEWM29097.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100024g57.4355.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:985540..985755 -
CM002457.1supercontigCM002457.1:985107..985309 -
CM002457.1supercontigCM002457.1:984408..984981 -
CM002457.1supercontigCM002457.1:984117..984302 -
CM002457.1supercontigCM002457.1:983966..984061 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29097.1 vs. NCBI_GenBank
Match: gi|585111616|gb|EWM29097.1| (hypothetical protein Naga_100024g57 [Nannochloropsis gaditana])

HSP 1 Score: 870.922 bits (2249), Expect = 0.000e+0
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0 
Query:    1 MLPLNSKWLKRAQPQVLGLSIRAGTIVRRTGKRAAKQRAQLYIDRQLSTDNWPSRSASDENPSGKIIMTYQEYMPMKTICEELTSYGFSYKFGGSSPILQPWKLTESKAKKLGLLLEGERAIRRFWEEQVRPKLPDDFYKRRNVDDYMWVDEARKLLGFDGPEYKDRFATARRRDQGARTKPMRAGSAKNGAGMAEDTGGTRAHTSVSAKKAALREGRGPQEYVTSNSTKRSGTDDSRGGSRDSDNGQEVENIKKKRTLPKVEEKIHYKELLRKTLSERAGASTGKESGSRSDGLPGTKQGSHRLQSSIFTSASPHRLQKRIRNAPWMGAKEQADLFESLYARVAILSDEELRRASDLLCQGSPQMIGLVKAYLGKEANDACIVQFKRILRSLNDKQISRTWRLMLTVRGWLSKEFWKLLCVET 424
            MLPLNSKWLKRAQPQVLGLSIRAGTIVRRTGKRAAKQRAQLYIDRQLSTDNWPSRSASDENPSGKIIMTYQEYMPMKTICEELTSYGFSYKFGGSSPILQPWKLTESKAKKLGLLLEGERAIRRFWEEQVRPKLPDDFYKRRNVDDYMWVDEARKLLGFDGPEYKDRFATARRRDQGARTKPMRAGSAKNGAGMAEDTGGTRAHTSVSAKKAALREGRGPQEYVTSNSTKRSGTDDSRGGSRDSDNGQEVENIKKKRTLPKVEEKIHYKELLRKTLSERAGASTGKESGSRSDGLPGTKQGSHRLQSSIFTSASPHRLQKRIRNAPWMGAKEQADLFESLYARVAILSDEELRRASDLLCQGSPQMIGLVKAYLGKEANDACIVQFKRILRSLNDKQISRTWRLMLTVRGWLSKEFWKLLCVET
Sbjct:    1 MLPLNSKWLKRAQPQVLGLSIRAGTIVRRTGKRAAKQRAQLYIDRQLSTDNWPSRSASDENPSGKIIMTYQEYMPMKTICEELTSYGFSYKFGGSSPILQPWKLTESKAKKLGLLLEGERAIRRFWEEQVRPKLPDDFYKRRNVDDYMWVDEARKLLGFDGPEYKDRFATARRRDQGARTKPMRAGSAKNGAGMAEDTGGTRAHTSVSAKKAALREGRGPQEYVTSNSTKRSGTDDSRGGSRDSDNGQEVENIKKKRTLPKVEEKIHYKELLRKTLSERAGASTGKESGSRSDGLPGTKQGSHRLQSSIFTSASPHRLQKRIRNAPWMGAKEQADLFESLYARVAILSDEELRRASDLLCQGSPQMIGLVKAYLGKEANDACIVQFKRILRSLNDKQISRTWRLMLTVRGWLSKEFWKLLCVET 424
The following BLAST results are available for this feature:
BLAST of EWM29097.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111616|gb|EWM29097.1|0.000e+0100.00hypothetical protein Naga_100024g57 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1580rna1580Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications