EWM29198.1, cds1559 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29198.1 vs. NCBI_GenBank
Match: gi|585111718|gb|EWM29198.1| (ribosome biogenesis gtpase [Nannochloropsis gaditana]) HSP 1 Score: 1919.05 bits (4970), Expect = 0.000e+0 Identity = 949/949 (100.00%), Postives = 949/949 (100.00%), Query Frame = 0
Query: 1 MAPHLSGLNFHSLVKRSSAAALLFSLFIMKLPCVGAFQGVVRVWSSAVAPSRAAVLTSFMSPKRHVLKRMPISALCRRSTIMASRKAGAGQGEHEAEGEGISPESISSTGSNAGGKGIGRGPRNRRKIAVSAEEEEFSALSDSRTSVSEEKDSIRRPRVISRPPSRPVKRTMTINPNWRAHGGPENSIKGPEEAASSSSGTAGSGKARVGKNGPRGASPLGAEVPRYVEDEDEDGITFPKDMVIRGLDSQSYEEARRQAVLSDDEGEEEEWADEGVMVEEEEGEDFDEEEEEEDFDEEEEEEDFDEGDEEEEDGAHLPPVRPVSMEERLRLAESGNIFNPYVARMHTRAGTGEGPSGEAEDPGPMDGGGLRFLEEDVSPGEKREEARRAQAPSLPVKFQYKVVVGAGTCPGCGNAFQTKNESSPGFLPPDVYERLQAQMTALRPGAPRKPRPDAPPLSKSAAGALRKKTETRGEEGDLFQGLSAEEEVEMLLSGKSREEFEIERAAGRGREAQGGEVDLDLDEEGKEEKEGEGREGEEGGEGEEEEEEFRAVICQRCHKLKHYGDVEDALRPGWSANELLTPERFRELVSVVRRKRCAVVCLVDIFDFHGSLLYNLPRIVGSNPVLVAVNKADLLPADFSQDRVRIWVKQELEKVGMTDVSTRDIHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLIELGRSGGDAQRKKKKKQGEQSKGGSLVTTSALPGTTLDFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMLEGRPFLFTFYVSNEVKLHQTATDRAGEFLDSHLGELISPPFTQERRAAMGPWVPRDFEIEGTGWKTSAVDIVISGLGWISVTGALDCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAVKSDKQKGSSR 949
MAPHLSGLNFHSLVKRSSAAALLFSLFIMKLPCVGAFQGVVRVWSSAVAPSRAAVLTSFMSPKRHVLKRMPISALCRRSTIMASRKAGAGQGEHEAEGEGISPESISSTGSNAGGKGIGRGPRNRRKIAVSAEEEEFSALSDSRTSVSEEKDSIRRPRVISRPPSRPVKRTMTINPNWRAHGGPENSIKGPEEAASSSSGTAGSGKARVGKNGPRGASPLGAEVPRYVEDEDEDGITFPKDMVIRGLDSQSYEEARRQAVLSDDEGEEEEWADEGVMVEEEEGEDFDEEEEEEDFDEEEEEEDFDEGDEEEEDGAHLPPVRPVSMEERLRLAESGNIFNPYVARMHTRAGTGEGPSGEAEDPGPMDGGGLRFLEEDVSPGEKREEARRAQAPSLPVKFQYKVVVGAGTCPGCGNAFQTKNESSPGFLPPDVYERLQAQMTALRPGAPRKPRPDAPPLSKSAAGALRKKTETRGEEGDLFQGLSAEEEVEMLLSGKSREEFEIERAAGRGREAQGGEVDLDLDEEGKEEKEGEGREGEEGGEGEEEEEEFRAVICQRCHKLKHYGDVEDALRPGWSANELLTPERFRELVSVVRRKRCAVVCLVDIFDFHGSLLYNLPRIVGSNPVLVAVNKADLLPADFSQDRVRIWVKQELEKVGMTDVSTRDIHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLIELGRSGGDAQRKKKKKQGEQSKGGSLVTTSALPGTTLDFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMLEGRPFLFTFYVSNEVKLHQTATDRAGEFLDSHLGELISPPFTQERRAAMGPWVPRDFEIEGTGWKTSAVDIVISGLGWISVTGALDCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAVKSDKQKGSSR
Sbjct: 1 MAPHLSGLNFHSLVKRSSAAALLFSLFIMKLPCVGAFQGVVRVWSSAVAPSRAAVLTSFMSPKRHVLKRMPISALCRRSTIMASRKAGAGQGEHEAEGEGISPESISSTGSNAGGKGIGRGPRNRRKIAVSAEEEEFSALSDSRTSVSEEKDSIRRPRVISRPPSRPVKRTMTINPNWRAHGGPENSIKGPEEAASSSSGTAGSGKARVGKNGPRGASPLGAEVPRYVEDEDEDGITFPKDMVIRGLDSQSYEEARRQAVLSDDEGEEEEWADEGVMVEEEEGEDFDEEEEEEDFDEEEEEEDFDEGDEEEEDGAHLPPVRPVSMEERLRLAESGNIFNPYVARMHTRAGTGEGPSGEAEDPGPMDGGGLRFLEEDVSPGEKREEARRAQAPSLPVKFQYKVVVGAGTCPGCGNAFQTKNESSPGFLPPDVYERLQAQMTALRPGAPRKPRPDAPPLSKSAAGALRKKTETRGEEGDLFQGLSAEEEVEMLLSGKSREEFEIERAAGRGREAQGGEVDLDLDEEGKEEKEGEGREGEEGGEGEEEEEEFRAVICQRCHKLKHYGDVEDALRPGWSANELLTPERFRELVSVVRRKRCAVVCLVDIFDFHGSLLYNLPRIVGSNPVLVAVNKADLLPADFSQDRVRIWVKQELEKVGMTDVSTRDIHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLIELGRSGGDAQRKKKKKQGEQSKGGSLVTTSALPGTTLDFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMLEGRPFLFTFYVSNEVKLHQTATDRAGEFLDSHLGELISPPFTQERRAAMGPWVPRDFEIEGTGWKTSAVDIVISGLGWISVTGALDCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAVKSDKQKGSSR 949
BLAST of EWM29198.1 vs. NCBI_GenBank
Match: gi|1210516878|dbj|GAX24367.1| (hypothetical protein FisN_4Lh492 [Fistulifera solaris]) HSP 1 Score: 408.297 bits (1048), Expect = 6.465e-126 Identity = 246/704 (34.94%), Postives = 384/704 (54.55%), Query Frame = 0
Query: 259 AVLSDDEGEEEEWADEGVMVEEEEGE-DFDEE------EEEEDFDEEEEEEDFDEGDEEEEDGAHLPPVRPVSMEERLRLAESGNIFNPYVARMHTRAGTGEGPSGEAEDPGPMDGGGLRFLEEDVSPGEKREEARRA-QAPSLPVKFQYKVVVGAGTCPGCGNAFQTKNESSPGFLPPDVYERLQAQMTALRPGAPRKPRPDAPPLSKSAAGALRKKTETRGEEGDLFQGLSAEEEVEMLLSGKSREEFEIERAAGRGREAQGGEVDLDLDEEGKEEKEGEGREGEEGGEGEEEEEEFRAVICQRCHKLKHYGDVEDALRPGWSANELLTPERFRELVSVVRRKRCAVVCLVDIFDFHGSLLYNLPRIVGSNPVLVAVNKADLLPADFSQDRVRIWVKQELEKVGMTDVSTR--DIHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLIELGRSGGDAQRKKKKKQGEQSKGGSLVTTSALPGTTLDFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMLEG-RPFLFTFYVSNEVKLHQTATDRAGEFLDSHLGELISPPFTQ--ERRAAMGPWVPRDFEIEGTGWKTSAVDIVISGLGWISVTGALDCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAVKSDKQKGSSR 949
A +DD+ E+++ADE +V++ +G ++DE + ++ + E FD D ++ + L E+L+ + + +A A T E +G+ P +D + +DV + + A Q +L K+V A TC CG FQ+ +ES PG+LPP+ ++ LQ ++ L + + D+ + E+E+E L+ +E + + ++DLD EK+ VIC+RCH L+++G VE+ LRPGW+ +++ E+F EL+ +R K +V LVD+FDF GS+L L I G NPV++A NKADLLP R WV++ELE +G+ ++ + L+SCKTG V +L +Q+A + D+YVIG+AN GKST INR++ RS + RK++ +G VTTS LPGTTL FI+VDLGD LYDTPGL++P T LL +ELK V+P KR+ +T R++ GK VL+GGL R+++++ +PFLFTF+VSN++KLH T+ D+A +F+ H G +++PP ER +G + EIEG+GWK +A DI I+GLGW++VTGA KV++ P+++G+ +R PLMP++ W +TAK+TG +AV+ + S +
Sbjct: 99 AFFADDDTFEDDFADEDFLVDDIDGSFEYDEHFPLTGRNDIQNLESGEVLGRFDLSDFTDDADSRL-----FERSEQLQGTSDDDSMDARIA-----AATSELRTGKVSVPKQLDDYAKQLSADDVGALRYSTDGQIAKQKENLS-----KLVTNAMTCSACGVDFQSTSESRPGYLPPEKFD-LQVKLGKLEEMQRLQEKADS-------------------------DSWTPEDEIEWLIQTSGKENLP---HSDNYIDINTMAEEMDLDFSKVSEKK---------------------VICKRCHGLQNFGKVEETLRPGWTKEPMISQEKFLELLRPLREKTAVIVALVDLFDFSGSVLPELDMIAGDNPVILAANKADLLPLKMGTLRAENWVRRELEYLGVKSLANIGGSVRLVSCKTGVGVDKMLDKARQLAEELGCDIYVIGSANAGKSTLINRILGGYRSHDEEPRKRRAGNANARRGQ--VTTSPLPGTTLRFIKVDLGDGRFLYDTPGLLVPGTFTQLLTADELKMVVPSKRVEPITFRIEPGKCVLIGGLARIELMDDCKPFLFTFFVSNDIKLHPTSVDKASDFVKKHAGGILTPPLAPGIERMEQIGDFEEHVVEIEGSGWKEAAADITITGLGWVAVTGAGPAKVKICVPKSIGISVRPPLMPFDMWESTAKYTGNKAVRKISKSSSGK 735
BLAST of EWM29198.1 vs. NCBI_GenBank
Match: gi|1210515050|dbj|GAX26013.1| (hypothetical protein FisN_4Hh492 [Fistulifera solaris]) HSP 1 Score: 407.912 bits (1047), Expect = 8.240e-126 Identity = 258/762 (33.86%), Postives = 404/762 (53.02%), Query Frame = 0
Query: 203 GSGKARVGKNGPRGASPLG--AEVPRYVEDEDEDGITFPKDMVIR--GLDSQSYEEARRQAVLSDDEGEEEEWADEGVMVEEEEGEDFDEEEE-----EEDFDEEEEEEDFDEGDEEEEDGAHLPPVRPVSMEERLRLAESGNIFNPYVARMHTRAGTGEGPSGEAEDPGPMDGGGLRFLEEDV-SPGEKREEARRAQAPSLPVKFQYKVVVGAGTCPGCGNAFQTKNESSPGFLPPDVYERLQAQMTALRPGAPRKPRPDAPPLSKSAAGALRKKTETRGEEGDLFQGLSAEEEVEMLLSGKSREEFEIERAAGRGREAQGGEVDLDLDEEGKEEKEGEGREGEEGGEGEEEEEEFRAVICQRCHKLKHYGDVEDALRPGWSANELLTPERFRELVSVVRRKRCAVVCLVDIFDFHGSLLYNLPRIVGSNPVLVAVNKADLLPADFSQDRVRIWVKQELEKVGMTDVSTR--DIHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLIELGRSGGDAQRKKKKKQGEQSKGGSLVTTSALPGTTLDFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMLEG-RPFLFTFYVSNEVKLHQTATDRAGEFLDSHLGELISPPFT--QERRAAMGPWVPRDFEIEGTGWKTSAVDIVISGLGWISVTGALDCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAVKSDKQKGSSR 949
S A G P+ + P G +V +E D + D + R G DS A +DD+ E+E+ADE + ++ + + F+ E+ E F E E F D D R + E+++ + +A A T E +G+ P +D +F +DV + G E Q +L K+V A TC CG FQ+ +E+ PG+LPP+ ++ L+ +++ L + + D+ + E+E+E L+ +E + + +D++ +E + + E + VIC+RCH L+++G V++ LRPGW+ +++ E+F EL+ +R K +V LVD+FDF GS+L L I G NPV++A NKADLLP+ R WV++ELE +G+ ++ + L+SCKTG + +L +Q+A +R D+YVIG+AN GKST IN ++ RS RK++ +G VTTS LPGTTL FI+VDLGD LYDTPGL++P T LL +ELK V+P KR+ +T R++ GK VL+GGL R+++++ +PFLFTF+VSN++KLH T+ D+A +F+ H G +++PP T ER +G + EIEG+GWK +A DI I+GLGW++VTGA KV++ P+++G+ +R PLMP++ W +TAK+TG +AV+ + S +
Sbjct: 46 ASADASEGPGQPKASRPKGKKIKVVEKIEQHHLDKLAQAFDELARKDGFDSSG-------AFFADDDTFEDEFADEDFLADDID-DSFEYNEQFPLTGENGFQNLESGEVFSRFDLS--DFTDDVDSRLIERSEQIQRTSDDDSMEARIA-----AATSELRTGKFSVPEQLDEYARQFSADDVGALGYVAEGQIAKQRENLT-----KLVTNAMTCSACGVDFQSTSENRPGYLPPEKFD-LRVKLSKLEEMQRLQEKADS-------------------------DSWTPEDEIEWLIQTSGKEN------------SPNSDNYIDINTMAEEMELDLSKLSE------------KKVICKRCHGLQNFGKVDETLRPGWTKEPMISQEKFLELLRPLREKTAVIVALVDLFDFSGSVLPELDMIAGDNPVILAANKADLLPSKMGTLRAENWVRRELEYLGVKSLANIGGSVRLVSCKTGVGIDKMLDKARQLAEERDCDIYVIGSANAGKSTLINHILGGYRSHDGEPRKRRAGNANARRGQ--VTTSPLPGTTLRFIKVDLGDGRFLYDTPGLLVPGTFTQLLTADELKMVVPSKRVEPITFRIEPGKCVLIGGLARIELMDDCKPFLFTFFVSNDIKLHPTSVDKASDFVKKHAGGILTPPLTPGVERMEQIGDFEEHVVEIEGSGWKEAAADITITGLGWVAVTGAGPAKVKICVPKSIGISVRPPLMPFDMWESTAKYTGNKAVRKTSKSSSGK 735
BLAST of EWM29198.1 vs. NCBI_GenBank
Match: gi|299116827|emb|CBN74939.1| (Lrc5, mitochondrial YqeH-related GTPase [Ectocarpus siliculosus]) HSP 1 Score: 398.282 bits (1022), Expect = 3.395e-122 Identity = 193/402 (48.01%), Postives = 265/402 (65.92%), Query Frame = 0
Query: 550 RAVICQRCHKLKHYGDVEDALRPGWSANELLTPERFRELVSVVRRKRCAVVCLVDIFDFHGSLLYNLPRIVGSNPVLVAVNKADLLPADFSQDRVRIWVKQELEKVGMTDVSTRDIHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLIELGRSGGDAQRKKKKKQGEQSKGGSLVTTSALPGTTLDFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMLEGRPFLFTFYVSNEVKLHQTATDRAGEFLDSHL--GELISPPFTQERRAAMGPWVPRDFEIEGTGWKTSAVDIVISGLGWISVTGALDCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAVKSDKQKGSSR 949
+ ++CQRC++L++YG VED LRPG+S ++LLTP+RF EL+ +R++RC ++ LVD+FDFHG+ LYNLP+I G+NPVLVA NK DLLP D + RV WV+ + + G+ D+ RD+HL+SCK G + PL+R + + + V G VT S++PGTTLDF++VDLGDK +LYDTPGL+LPH +T+ LN EEL+A IP+K+++HVT R+ EGK VL+GGL R++++ GRPFL TF+VSN+V+LH T R + L H+ G++I PPF ER +GP VP DF+I G GW+ SA D+VI+GLGW+SVTGA +RV AP V V R PL+PYE+W TTAK+TG VK ++K R
Sbjct: 374 KLLVCQRCYRLRNYGSVEDTLRPGFSDSDLLTPQRFLELLGSIRKQRCLIIYLVDLFDFHGTFLYNLPKITGNNPVLVAGNKVDLLPKDLKRQRVTKWVRDKCRESGLPDMEMRDVHLVSCKHGVGIPPLMRKGGKGGGRGGKAPAVAGRG--------------------------------------VTVSSVPGTTLDFLKVDLGDKRALYDTPGLLLPHTLTSRLNAEELRAAIPKKKVDHVTFRVGEGKVVLVGGLARVEVVTGRPFLLTFFVSNDVRLHPTDARRVDDMLSEHVGKGQMIFPPFDPERVDELGPLVPTDFDIMGAGWRESAADVVIAGLGWVSVTGAGPVTLRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKKGRKKQGRR 737
BLAST of EWM29198.1 vs. NCBI_GenBank
Match: gi|397620424|gb|EJK65712.1| (hypothetical protein THAOC_13399 [Thalassiosira oceanica]) HSP 1 Score: 391.349 bits (1004), Expect = 3.726e-121 Identity = 218/573 (38.05%), Postives = 330/573 (57.59%), Query Frame = 0
Query: 383 REEARRAQAPSLPVKFQYKVVVGAGTCPGCGNAFQTKNESSPGFLPPDVYERLQAQMTALRPGAPRKPRPDAPPLSKSAAGALRKKTETRGEEGDLFQGLSAEEEVEMLLSGKSREEFEIERAAGRGREAQGGEVDLDLDEEGKEEKEGEGREGEEGGEGEEEEEEFRAVICQRCHKLKHYGDVEDALRPGWSANELLTPERFRELVSVVRRKRCAVVCLVDIFDFHGSLLYNLPRIVGSNPVLVAVNKADLLPADFSQDRVRIWVKQELEKVGMTDVSTRD--IHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLIELGRSGGDAQRKKKKKQGEQSKGGSLVTTSALPGTTLDFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDML-EGRPFLFTFYVSNEVKLHQTATDRAGEFLDSHLGELISPPFT--QERRAAMGPWVPRDFEIEGTGWKTSAVDIVISGLGWISVTGALDCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAV-KSDKQKGSSR 949
R EA + P + +++++ G+ TCP CG+ FQ +E PG+LPPD +E Q ++ + + R +E D S E+EV+ LL E + ++ +A E+ LDL+E K + VIC+RCH L+++G VE LRPGW+ L+ E+FR+L+ ++ K ++ LVD+FDF GS+L L +I G NPV++A NKADLLP++ R WV++ELE + + ++ + L+SCKTG + L+ + +A ++ D+YV+GAAN GKS G +++ K + G +K VTTS LPGTTL FI+VDL LYDTPGL++P +T L EELK V+P+KR+ VT R++ GK L+GGL R++++ + +PFLFTF+V+NE+KLH T++ +A +F+ SH+G+L++PP Q R +G + + E++G GWK +A DI + GLGW++VTGA KVR+ P+ +GV LR PLMP++ W TTAK+TG R+V KS K + R
Sbjct: 96 RREANPFGSDETPRRAKFQILTGSMTCPACGSDFQDTDEMKPGYLPPDKFET-QVKLKQI-------------------------EDIQRQQEKDDSDEWSPEDEVDWLLRQSGVEG--QDDSSSIDIDALADEMGLDLEELAK-----------------------KKVICKRCHGLQNFGTVEKNLRPGWTDEPTLSQEQFRKLLMPLQNKVAVIIALVDLFDFSGSVLPELDKIAGDNPVILAANKADLLPSEMGHVRAENWVRRELEYLDVNSIANIGGAVRLVSCKTGYGISALMEKAQSLAEEKECDIYVVGAANAGKSY-----------DGASKKNGKMRAGNANKWKGSVTTSPLPGTTLQFIKVDLSGGKVLYDTPGLLVPGCLTERLTPEELKIVVPKKRVEPVTFRIQAGKCALVGGLARVELIGDCKPFLFTFFVANEIKLHLTSSLKADDFISSHVGKLLTPPLEPGQARLEEIGEFEYHEIEVQGEGWKQAAADITLRGLGWVAVTGAGRAKVRIGVPKGIGVSLRPPLMPFDVWETTAKYTGGRSVRKSGKSRTGKR 606
BLAST of EWM29198.1 vs. NCBI_GenBank
Match: gi|219127817|ref|XP_002184124.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404355|gb|EEC44302.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 392.889 bits (1008), Expect = 1.402e-120 Identity = 219/572 (38.29%), Postives = 332/572 (58.04%), Query Frame = 0
Query: 383 REEARRAQAPSLPVKFQYKVVVGAGTCPGCGNAFQTKNESSPGFLPPDVYERLQAQMTALRPGAPRKPRPDAPPLSKSAAGALRK--KTETRGEEGDLFQGLSAEEEVEMLLS--GKSREEFEIERAAGRGREAQGGEVDLDLDEEGKEEKEGEGREGEEGGEGEEEEEEFRAVICQRCHKLKHYGDVEDALRPGWSANELLTPERFRELVSVVRRKRCAVVCLVDIFDFHGSLLYNLPRIVGSNPVLVAVNKADLLPADFSQDRVRIWVKQELEKVGMTDVSTR--DIHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLI---ELGRSGGDAQRKKKKKQGEQSKGGSLVTTSALPGTTLDFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDML-EGRPFLFTFYVSNEVKLHQTATDRAGEFLDSHLGELISPPFT--QERRAAMGPWVPRDFEIEGTGWKTSAVDIVISGLGWISVTGALDCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAVKSD 942
R EA P K ++++V + +C CG+ FQ NE PG+LPP+ + +++A G + + K + + E+ + + E+E+E L+ GK E++ ++ GE+ LDL E K + VIC+RCH L+++G V+D+LRPGW+ LL+ E+FREL+ ++ K +V LVD+FDF GS+L L I G NPV++A NKADLLP++ + R WV++ELE +G+ ++ + L+SCKTG + LL + +A + D+YV+GAAN GKST +N ++ ++ RS G K + G ++ VTTS LPGTTL FI+VDLG SLYDTPGL++ +T LL EELK V+P+K I VTLRL GK VL+GGL R++++ + RPF+FTF+V+NE+KLH T +RA EF+ H G +++PP +R +G + +I+G GWK +A DI ++GLGW++VTGA +V++ P+ +GV +R PLMP++ W +K+TG RAV +
Sbjct: 189 RTEANPFGNDETPRKERFQLVTNSMSCSACGSDFQCHNEDRPGYLPPEKFA------------------------TQTALGKIEQMQKLQDKAEKAEW----TPEDEIEWLIQTQGKKDPNKEMQEVPQIDVDSLAGEMGLDLVELSK-----------------------KMVICKRCHGLQNFGKVQDSLRPGWTKEPLLSQEKFRELLRPIKEKPAVIVALVDLFDFSGSVLPELDEIAGENPVILAANKADLLPSEMGRVRAESWVRRELEYLGVKSLAGMRGAVRLVSCKTGAGINDLLEKARGLAEEIDGDIYVVGAANAGKSTLLNFVLGQDKVNRSPG------KARAGNRNAFKGAVTTSPLPGTTLKFIKVDLGGGRSLYDTPGLLVLGTVTQLLTPEELKIVVPKKPIEPVTLRLSTGKCVLVGGLARIELIGDSRPFMFTFFVANEIKLHPTDIERADEFVLKHAGGMLTPPLAPGPKRMEEIGEFEDHIVDIQGAGWKEAAADISLTGLGWVAVTGAGTAQVKISVPKGIGVSVRPPLMPFDIWKVASKYTGSRAVNYN 703
BLAST of EWM29198.1 vs. NCBI_GenBank
Match: gi|546308055|ref|XP_005713542.1| (unnamed protein product [Chondrus crispus] >gi|507109937|emb|CDF33723.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 361.688 bits (927), Expect = 5.054e-111 Identity = 182/423 (43.03%), Postives = 261/423 (61.70%), Query Frame = 0
Query: 553 ICQRCHKLKHYGDVEDALR-------PGWSANEL-----------------LTPERFRELVSVVRRKRCAVVCLVDIFDFHGSLLYNLPRIVGS-NPVLVAVNKADLLPADFSQDRVRIWVKQELEKVGMTDVSTRDIHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLIELGRSGGDAQRKKKKKQGEQSKGG-SLVTTSALPGTTLDFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMLEGRPFLFTFYVSNEVKLHQTATDRAGEFLDSHLGELISPPFTQERRAAMGPWVPRDFEIEGTGWKTSAVDIVISGLGWISVTGALDCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAVKSDKQKGSSR 949
+CQRC++L HYG +E LR P + L L+P +FR + +R ++ LVDIFDFHG+ + ++ I+G NP+++AVNK DLLP ++ RV W+K E +G+ DV+ IHL+S G V L+ ++A+QRR D+YVIGAANVGKS+FINRL+ + + G+ R K + + K +TTS +PGTTLD I + LG KV+LYDTPGL++ HQ+T L+ +EL+AV+P K + +VT RL EGK++ +GGL RL+++ G+PF FT + + VK+H D A EFL H+G+ ++PPF++E +G W + F EG WK S VDIV+SGLGWISVTG ++R+ P VGV R PLMP+ET +K+TG AV + + SS+
Sbjct: 90 VCQRCYRLTHYGKIESHLRVKPKRTFPLPRTSSLSDKTDIEKESSGDGLSELSPRKFRRTLERLRNVNAVIIFLVDIFDFHGTFIPSVEDIIGQKNPIILAVNKVDLLPKNYKASRVEGWIKHECSVMGLHDVA--GIHLVSSTKGTGVGELVADALRIAKQRRSDVYVIGAANVGKSSFINRLMRIRKGKGNGSRSKDDGRPRRDKTSLGTITTSVVPGTTLDVIRIPLGGKVNLYDTPGLMISHQLTNFLDAKELRAVLPSKSVENVTFRLAEGKAIYIGGLARLEVVSGKPFFFTCFFAPTVKIHPGRADGAHEFLHRHVGDFLTPPFSEEGLEKLGEWTSKSFTAEGQSWKKSCVDIVLSGLGWISVTGPGKVRLRIWVPRGVGVFTREPLMPFETDVGVSKYTGSTAVNRKQMRKSSK 510
BLAST of EWM29198.1 vs. NCBI_GenBank
Match: gi|545707817|ref|XP_005706222.1| (GTP-binding protein [Galdieria sulphuraria] >gi|452822685|gb|EME29702.1| GTP-binding protein [Galdieria sulphuraria]) HSP 1 Score: 337.035 bits (863), Expect = 2.386e-101 Identity = 172/413 (41.65%), Postives = 254/413 (61.50%), Query Frame = 0
Query: 553 ICQRCHKLKHYGDVEDALRPGWSANE-----LLTPERFRELVSVVRRKRCAVVCLVDIFDFHGSLLYNLPRIVGSNPVLVAVNKADLLPADFSQDRVRIWVKQELEKVGMTDVSTRDIHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLIELG---RSGGDAQRKKKKKQGEQS----------KGGSLVTTSALPGTTLDFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMLEGRPFLFTFYVSNEVKLHQTATDRAGEFLDSHLGELISPPFTQERRAAMGPWVPRDFEIEGTGWKTSAVDIVISGLGWISVTGALDCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAVKSDKQKGS 947
+CQRC+ + H VED L+ G + + L + + F + + + KRC +V +VDIFDF GS + LP I G+NPV++ VNK DLLP D + R+ +W+K + E G+T + IH +SC + + ++ + D+YV+G NVGKSTFINRL+ ++G + KQG+ S K +TTS PGTTL+ I + G S+YDTPG+I PHQIT LL +EE+K V+P+KR+ V+ RL EGK + GGL RL+ML+G+PF FT ++SNEVK+H + T +A E L++H+G L+ PP + + +G + ++FE++G GW S+ DIVISGLGW++VTG KVRV+AP+ VGV LR P+ P+E +K+TG +A +++ S
Sbjct: 137 VCQRCYYMVHRTLVEDQLKIGATEDSTNKDILHSLKLFEQRLENICSKRCIIVYMVDIFDFDGSFVSRLPFITGNNPVILIVNKIDLLPKDINIGRLYVWLKNQCEARGLTKI--HRIHFVSCTKDYRMGETKADIIRLVQYLNADVYVVGCTNVGKSTFINRLLSNTVEKKTGQELLNYLGLKQGQFSLTELKRAFKDKKDPQLTTSCFPGTTLNPIRIHFGRSHSMYDTPGIIQPHQITHLLTSEEIKMVLPKKRVRVVSFRLMEGKCIHFGGLARLEMLQGKPFFFTVFMSNEVKVHPSTTAKAEELLETHVGGLLQPPISWRKYKELGNFKAKEFEVDGVGWLQSSHDIVISGLGWVAVTGCGRLKVRVVAPKGVGVFLREPIAPFEVLKGVSKYTGYKAFAGNRETRS 547
BLAST of EWM29198.1 vs. NCBI_GenBank
Match: gi|470522798|ref|XP_004354073.1| (ribosome biogenesis GTPase YqeH, putative [Acanthamoeba castellanii str. Neff] >gi|440803475|gb|ELR24376.1| ribosome biogenesis GTPase YqeH, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 288.5 bits (737), Expect = 7.247e-83 Identity = 161/398 (40.45%), Postives = 232/398 (58.29%), Query Frame = 0
Query: 544 EEEEEFRAVICQRCHKLKHYGDVEDALRPGWSANELLTPERFRELVSVVRRKRCAVVCLVDIFDFHGSLLYNLPRIVGSNPVLVAVNKADLLPADFSQDRVRIWVKQELEKVGMTDVSTRDIHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLIELGRSGGDAQRKKKKKQGEQSKGGSLVTTSALPGTTLDFIEVDLGDKVS--------LYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDMLEGR-PFLFTFYVSNEVKLHQTATDRAGEFLDSHLGELISPPFTQERRAAMGPWVPRDFEIEGT----GWKTSAVDIVISGLGWISV---TGALDCKVRVMAPEAVGVRLRSPLMPYE 925
++EE A +CQRCH L+H+G V P E +E + ++ + C VV +VDIFDF GS + + I G+NPV++ NK DLLP +R++IW+K+ ++G+ +V R +HLIS K+G V L R ++Q+ ++R D+YV+G NVGKST INRLI + G QG + + +L+TTS +PGTTL+ I LG K + LYDTPG+I HQ+ LLN EEL +P++RI VT RL GK++ GGL RLD ++G P T ++S E+K+H T+ +A + + H G L+ PP +ER + ++ +D IE G K S DIV SGLGW S+ T D +R ++PE VG+ LR PLMP+E
Sbjct: 35 KQEERGLAPVCQRCHSLRHHGIVTPLKVPY---------EEVKEHLKLISDQSCLVVKIVDIFDFSGSFINDFRGITGNNPVVLVGNKLDLLPVGAKPERIQIWLKRLATEMGLKNV--RSVHLISAKSGEGVHSLSRKIEQLRKER--DVYVVGCTNVGKSTLINRLISINTKGTYNSLTVHIVQGPKKR--NLITTSIVPGTTLNLISFPLGGKKAFKMGKRAFLYDTPGVINKHQMANLLNMEELSITLPKRRIQPVTYRLVPGKALFFGGLGRLDYVDGPGPLYLTLFLSKELKVHPTSIAKADDVMSKHAGTLLVPPLGEERAKQLPEFIAKDIHIEADEERGGLKKSFADIVFSGLGWTSLVTPTFDRDIHLRSLSPEGVGIFLREPLMPFE 417
BLAST of EWM29198.1 vs. NCBI_GenBank
Match: gi|1072227618|gb|OEU12357.1| (hypothetical protein FRACYDRAFT_172393 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 257.684 bits (657), Expect = 8.101e-75 Identity = 123/280 (43.93%), Postives = 190/280 (67.86%), Query Frame = 0
Query: 665 IHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLIELGRSGGDAQRK--KKKKQGEQSKGGSLVTTSALPGTTLDFIEVDLGDKVSLYDTPGLILPHQITTLLNTEELKAVIPQKRINHVTLRLKEGKSVLLGGLVRLDML-EGRPFLFTFYVSNEVKLHQTATDRAGEFLDSHLGELISPPFT--QERRAAMGPWVPRDFEIEGTGWKTSAVDIVISGLGWISVTGALDCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAV 939
+ L+SCKTG+ + +L K++A + D+YV+GAAN GKST IN + L R+ D + K K + G +++ +TTS LPGTTL FI++DLGD ++YDTPGL++P IT LL EEL+ V P+K++ +T R+ GK VL+GGL +++++ + +PFL TF+V+N++KLH T + RA EF+ H G +++PP ER A +G + E++G GWK +A DI ++GLGWI+VTGA K+++ P+ +G+ +R PLMP++ W A++TG +AV
Sbjct: 13 VRLVSCKTGDGISDMLDKAKELANEVNGDIYVVGAANAGKSTLINYI--LSRNSSDKKEKPTMKIRAGNRNQQKGELTTSPLPGTTLKFIKIDLGDGQNIYDTPGLLVPGTITQLLTPEELRVVCPKKKVEPITFRVASGKCVLIGGLAKIEVIGDSKPFLLTFFVANDIKLHPTDSSRADEFVRKHTGTILTPPLEPGPERMAEIGEFDTHTIELDGAGWKEAAADISLTGLGWIAVTGAGKVKLKISVPKGIGIAVRPPLMPFDIWEVAARYTGSKAV 290 The following BLAST results are available for this feature:
BLAST of EWM29198.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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