EWM29203.1, cds1545 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29203.1 vs. NCBI_GenBank
Match: gi|585111723|gb|EWM29203.1| (heat shock protein [Nannochloropsis gaditana]) HSP 1 Score: 1102.43 bits (2850), Expect = 0.000e+0 Identity = 537/537 (100.00%), Postives = 537/537 (100.00%), Query Frame = 0
Query: 1 MGLRGPPPLPYRRQGVGEKLHWDQSSCLSGLGSTAISRHSSSSFCSLDFAYHLWIDELDDKQDDRGCLIKSNRMAVSREEELRREASPPPAAYEDDNALSEPASPAARTARGSRGVDLEAGMNSKQDARQRTFLRGLETGQGSTGSQIGASHAASCVGLKSEREMRNLLSFEWALLKKGVPSSRPPLFFFLLWVFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLLADRLPDRYEWIIGFATAVLVGLMFSLGLLRLTLAHVKWGGPQIEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCHGPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVLVAVYVNLMIWWLLPTDPARVNLTDLGLNNDFPLPVSPAFVCADPSSSSVTRETKDKTKHCAMAGSGIACEAMVKSGGGGRRRWSSSRWRGRLKGLLMKVLHLSAINIRLLLGAYQNVLSDMRQHMEPPIPT 537
MGLRGPPPLPYRRQGVGEKLHWDQSSCLSGLGSTAISRHSSSSFCSLDFAYHLWIDELDDKQDDRGCLIKSNRMAVSREEELRREASPPPAAYEDDNALSEPASPAARTARGSRGVDLEAGMNSKQDARQRTFLRGLETGQGSTGSQIGASHAASCVGLKSEREMRNLLSFEWALLKKGVPSSRPPLFFFLLWVFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLLADRLPDRYEWIIGFATAVLVGLMFSLGLLRLTLAHVKWGGPQIEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCHGPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVLVAVYVNLMIWWLLPTDPARVNLTDLGLNNDFPLPVSPAFVCADPSSSSVTRETKDKTKHCAMAGSGIACEAMVKSGGGGRRRWSSSRWRGRLKGLLMKVLHLSAINIRLLLGAYQNVLSDMRQHMEPPIPT
Sbjct: 1 MGLRGPPPLPYRRQGVGEKLHWDQSSCLSGLGSTAISRHSSSSFCSLDFAYHLWIDELDDKQDDRGCLIKSNRMAVSREEELRREASPPPAAYEDDNALSEPASPAARTARGSRGVDLEAGMNSKQDARQRTFLRGLETGQGSTGSQIGASHAASCVGLKSEREMRNLLSFEWALLKKGVPSSRPPLFFFLLWVFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLLADRLPDRYEWIIGFATAVLVGLMFSLGLLRLTLAHVKWGGPQIEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCHGPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVLVAVYVNLMIWWLLPTDPARVNLTDLGLNNDFPLPVSPAFVCADPSSSSVTRETKDKTKHCAMAGSGIACEAMVKSGGGGRRRWSSSRWRGRLKGLLMKVLHLSAINIRLLLGAYQNVLSDMRQHMEPPIPT 537
BLAST of EWM29203.1 vs. NCBI_GenBank
Match: gi|585103057|gb|EWM22532.1| (hypothetical protein Naga_100290g2 [Nannochloropsis gaditana]) HSP 1 Score: 232.646 bits (592), Expect = 2.308e-67 Identity = 114/263 (43.35%), Postives = 168/263 (63.88%), Query Frame = 0
Query: 160 KSEREMRNLLSFEWALLKKGVPSSRPPLFFFLLWVFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLLADRLPDRYEWIIGFATAVLVGLMFSLGLLRLTLAHVKWGGPQ--IEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCHGPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVLVAVYVNLMIWWLLP 420
K +E+ EWALLK+ + FF+ EY +L HN+VY+L+GK+WG GPPPPL DLG+M A P Y W++GF +L+G++ L L RL L +V WG P+ +E R+ + +P+P + +RACQ +++G+ LRV++F+ TL PNPA YCH P WDPP+ + EI RI GSCGDLLFS HT H M +ML V R+AP + L++ +M ++ +S+LAFK+HY+ D++ A+Y ++++W L P
Sbjct: 113 KKWKEIEWQGRLEWALLKQ---EWKWIAMFFV----AEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIGMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVLLWMLTP 368
BLAST of EWM29203.1 vs. NCBI_GenBank
Match: gi|553190962|ref|XP_005855301.1| (heat shock protein [Nannochloropsis gaditana CCMP526] >gi|422293757|gb|EKU21057.1| heat shock protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 211.075 bits (536), Expect = 2.180e-61 Identity = 98/217 (45.16%), Postives = 145/217 (66.82%), Query Frame = 0
Query: 192 LWVFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLLADRLPDRYEWIIGFATAVLVGLMFSLGLLRLTLAHVKWGGPQ--IEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCHGPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVL 406
+++ EY +L HN+VY+L+GK+WG GPPPPL DLG+M A P Y W++GF +L+ ++ L L RL L +V WG P+ +E R+ + +P+P + +RACQ +++G+ LRV++F+ TL PNPA YCH P WDPP+ + EI RI GSCGDLLFS HT H M +ML V R+AP + L++ +M ++ +S+LAFK+HY+ D++
Sbjct: 1 MFLVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIAMVLVLCLGRLLLNNVPWGCPETVLEKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIV 217
BLAST of EWM29203.1 vs. NCBI_GenBank
Match: gi|695382129|ref|XP_009517302.1| (hypothetical protein PHYSODRAFT_469105 [Phytophthora sojae] >gi|348690213|gb|EGZ30027.1| hypothetical protein PHYSODRAFT_469105 [Phytophthora sojae]) HSP 1 Score: 99.3673 bits (246), Expect = 3.954e-19 Identity = 78/300 (26.00%), Postives = 135/300 (45.00%), Query Frame = 0
Query: 159 LKSEREMRNLLSFEWALLKKGVPSSRPPLFFFLLWVFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLLADRLPDRYEWIIGFATAVLVGLMFS-------LGLLRLTLAHVKWGGPQIEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCH---------------------GPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVLVAVYVNLMIWWLLPTDPARVNLTD 430
L+ + N + E LLK+ P V ++YVH HN Y++QG V+ L DLG L+++ + GFA ++ L+F+ + +L + L + G P+ V +V++R +S+ + R ++FLVT +P+PA +C PD++PP +GE+FTR+ CGDL+FS HT + + L+L + +Y P + + + ++A ++A + HYT DV A+Y+ + W +L +N D
Sbjct: 7 LRDKESFINYVKIEIQLLKQEWKIILP-------CVIMQYVHAIFHNLAYYIQGNYLTVEQRFT-LHDLGYELMSE--------LTGFAASISDILVFAAVFGPAIVLVLTIPLFRQEPGRPRYLV----------------IVLKRCLLQLSICLVFRCISFLVTALPSPADHCELKFNETCLAANPDDPVPCVIPNPDFNPP-TIGELFTRLDSLTGCGDLMFSSHTIYTVSLILTIWKYWPN-KYGITIMVCVQIIIAFLIVASRKHYTLDVFSALYIVPLFWLVLEAYHKDINSKD 272
BLAST of EWM29203.1 vs. NCBI_GenBank
Match: gi|953500208|emb|CEG38849.1| (Uncharacterized conserved protein [Plasmopara halstedii]) HSP 1 Score: 97.0561 bits (240), Expect = 2.861e-18 Identity = 78/286 (27.27%), Postives = 124/286 (43.36%), Query Frame = 0
Query: 159 LKSEREMRNLLSFEWALLKKGVPSSRPPLFFFLLWVFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLLADRLPDRYEWIIGFATAVLVGLMFS-------LGLLRLTLAHVKWGGPQIEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCH---------------------GPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVLVAVYVNLMIW 416
L+ + N + E LL K P V ++YVH HN Y++QGK + L DLG L+ + + GFA + L+F+ + +L + L + G P+ V +V++R+ S+ + R+++FLVT +P A +C PD+DPP EIFTR+ CGDL+FS HT + + L+L V ++ P R + + +A ++A + HYT DV A+YV +IW
Sbjct: 35 LRDKASFINYVKIELQLLSKEWKIILP-------CVIMQYVHAIFHNLAYYIQGKYLSTEQRFT-LHDLGFELMPE--------LTGFAADISEILVFAAIFGPAIILILTIPLFRQEPGRPRYLV----------------IVLKRSLMQFSICLFFRIISFLVTALPGSADHCELKFDDSCLALNPGDPVSCVVPNPDFDPPS-TSEIFTRLNALKGCGDLMFSSHTIYTVSLILTVWKFWPN-RYGITIMVSVQIAIAFLIVASRKHYTLDVFTALYVVPLIW 286
BLAST of EWM29203.1 vs. NCBI_GenBank
Match: gi|325189569|emb|CCA24055.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 95.9005 bits (237), Expect = 6.199e-18 Identity = 71/263 (27.00%), Postives = 123/263 (46.77%), Query Frame = 0
Query: 194 VFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLLADRLPDRYEWIIGFATAVLVGLMFSLGLLRLTLAHVKWGGPQIEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCH---------------------GPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMT----LLALSLLAFKSHYTSDVLVAVYVNLMIWWLLPTDPARVNLTDL 431
+ ++Y+H HN+ Y++QG + V+ L DLG L+ P+ + ++ G +F+ +L ++ V P P ++++++R +S+ + LR+ +F++T +P+PA +C PD++PP V + FT+I CGDL+FS HT + + L+L V +Y P L IG M +A ++A + HY+ DV A+YV MIW LL +N D+
Sbjct: 46 ILMQYLHSVFHNWAYYIQGNVLSVEQRVM-LYDLGYALM----PELTGTAAHLSEYLVFGAVFAPTILLISSVLVLKQNP-------------LRPRFIAIILKRLLLQISIALVLRICSFMITSLPSPAEHCRLVFDEACKAANPNDYMKCVIPNPDFEPP-TVSQFFTKIDALRGCGDLMFSSHTIYTLSLILSVCKYWP-----HPLLIGVMVSVQIAIAFLIVASRKHYSIDVFTALYVVPMIWLLLDAYMHDINHKDV 284
BLAST of EWM29203.1 vs. NCBI_GenBank
Match: gi|294938997|ref|XP_002782283.1| (hypothetical protein Pmar_PMAR020859 [Perkinsus marinus ATCC 50983] >gi|239893822|gb|EER14078.1| hypothetical protein Pmar_PMAR020859 [Perkinsus marinus ATCC 50983]) HSP 1 Score: 92.8189 bits (229), Expect = 3.842e-16 Identity = 75/272 (27.57%), Postives = 120/272 (44.12%), Query Frame = 0
Query: 165 MRNLLSFEWALLKKGVPSSRPPLFFFLLWVFVEYVHLTAHNYVYFLQGKIWGVDGP----PPPLPDLGLMLLADRLPDRYEW------IIGFATAVLVGLMFSLGLLRLTLAHVKWGGPQIEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCHGPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVLVAVYVNLMIW----WLLPTD 422
MR EW + KKG + + ++ +H HN VY L G+ +GV GP P+ D+ L P+ EW II + T VL+G+ ++L L P ++ R S+ R+ +F+ T++P PA +C +++PP GEIF RI +G C DL+FSGH + + + + RYA + + K ++ L + ++A + H T DV+VA Y IW + +P D
Sbjct: 395 MRLAWPVEWTIFKKGA------WWGIVFFIITLLIHNWVHNCVYMLAGQ-YGVYGPYGRPGNPVVDILFELFG---PEPAEWSPAPGDIILYVT-VLMGVFYALRPLLFPF-----------------------PFRTMNILWRWTVVASLATYARLASFIFTILPGPAEHCSEANFNPPTTAGEIFARIFVSGGCSDLIFSGHMLYVITVTCALFRYA-EHWSIKYFALVLNILQGILIIASRRHNTVDVVVAAYSVPCIWCTFAYFVPND 631
BLAST of EWM29203.1 vs. NCBI_GenBank
Match: gi|673034196|ref|XP_008871059.1| (hypothetical protein H310_07470 [Aphanomyces invadans] >gi|574473030|gb|ETW00034.1| hypothetical protein H310_07470 [Aphanomyces invadans]) HSP 1 Score: 88.5817 bits (218), Expect = 1.509e-15 Identity = 80/309 (25.89%), Postives = 132/309 (42.72%), Query Frame = 0
Query: 187 LFFFLLWVFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLLADRLPDRYEWIIGFATAVLVGLMFSLG-LLRLTLAHVKWGGPQIEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCH------------------------GPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVLVAVYVNLMIWWLLPTDPARVNLTDLGLNNDFPLPVSPAFVCADPSSSSVTRETKDKTKHCAMAG 470
L F L W +Y+H HN Y++Q K+ P L DLG LL P+ E + ++ G +F LL +++ +K P + P SL+ +R ++ + LR ++F+VT +P PAA+C PD+ PP G IF + CGDL+FS HT++ + ++L V +Y + L + + A ++A + HY+ DV+ A+YV M+W+LL +N D ++ + + A+ P SS + C M
Sbjct: 34 LLFGLAW---QYIHNIFHNTAYWMQSKLSLAQRMP--LYDLGFELL----PELTESEAHVSEYLVFGGIFGPSILLFVSVLVIKPSSP------------SAPPRFFSLIAKRVLLQTALCLMLRCISFMVTSLPGPAAHCRPTFNQTCIDAFPNDPSASFRCVVPNPDFQPPMTAGTIFGHVDALNGCGDLMFSSHTTYTLSMILAVWKYW-RSVPLLVLMLVLQIITAFFIVAARKHYSLDVIAALYVVPMVWFLLEAYHKDLNHADAVVSRE---SIQNAYGLDIPHESSRLESNQATLVQCEMTA 317
BLAST of EWM29203.1 vs. NCBI_GenBank
Match: gi|675176591|ref|XP_008897180.1| (hypothetical protein PPTG_05390 [Phytophthora parasitica INRA-310] >gi|566011216|gb|ETI34127.1| hypothetical protein F443_19294 [Phytophthora parasitica P1569] >gi|567948756|gb|ETK74497.1| hypothetical protein L915_18717 [Phytophthora parasitica] >gi|568006920|gb|ETL81166.1| hypothetical protein L917_18444 [Phytophthora parasitica] >gi|568036759|gb|ETM34361.1| hypothetical protein L914_18532 [Phytophthora parasitica] >gi|568102970|gb|ETN17641.1| hypothetical protein PPTG_05390 [Phytophthora parasitica INRA-310] >gi|570314995|gb|ETO62943.1| hypothetical protein F444_19242 [Phytophthora parasitica P1976] >gi|570969043|gb|ETP32162.1| hypothetical protein F442_19069 [Phytophthora parasitica P10297] >gi|970664624|gb|KUG01498.1| hypothetical protein AM587_10008099 [Phytophthora nicotianae]) HSP 1 Score: 87.8113 bits (216), Expect = 2.520e-15 Identity = 75/299 (25.08%), Postives = 123/299 (41.14%), Query Frame = 0
Query: 159 LKSEREMRNLLSFEWALLKKGVPSSRPPLFFFLLWVFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLL------ADRLPDRYEWIIGFATAVLVGLMFSLGLLRLTLAHVKWGGPQIEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCH---------------------GPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVLVAVYVNLMIWWLLPTDPARVNLTD 430
L+ + N + E LL K P VF++Y H HN Y++Q + L DLG L+ A L D + FA A+ L+ ++ L R + P + + ++R +S+ + R ++FLVT +P PA +C P+++PP +GE+FTR+ CGDL+FS HT + + +L V +Y P + + +T +A ++A + HYT DV A+Y+ + W L +N D
Sbjct: 7 LRDKENFINYVKIELQLLAKEWKIILP-------CVFMQYAHAIFHNLAYYIQAHYLSTEQRFT-LHDLGYELMGELTGWASDLSDILVFATIFAPAI--ALVLTIPLFR---------------------QEPGRPRYLVITLKRCLLQLSICLVFRCISFLVTALPGPADHCELKFNDTCLAANPDDPVPCVVPNPEFNPPS-IGELFTRLDSLNGCGDLMFSSHTIYTVSFILTVWKYWPNKYGISIMVLVQIT-IAFLIVASRKHYTLDVFSALYIVPLFWLALEAYHKDINNKD 272
BLAST of EWM29203.1 vs. NCBI_GenBank
Match: gi|813175700|ref|XP_012205002.1| (hypothetical protein SPRG_09859 [Saprolegnia parasitica CBS 223.65] >gi|641530083|gb|KDO24225.1| hypothetical protein SPRG_09859 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 86.6557 bits (213), Expect = 6.954e-15 Identity = 71/269 (26.39%), Postives = 116/269 (43.12%), Query Frame = 0
Query: 187 LFFFLLWVFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLLADRLPDRYEWIIGFATAVLVGLMFSLGLLRLTLAHVKWGGPQIEVRDADNQHKTTLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCH---------------------GPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVLVAVYVNLMIWWLLPTDPARVNLTDLGLN 434
L F LLW +Y+H HN Y++Q ++ V P L D+G LL P+ E + ++ G +F ++ L P I+ ++ N V+++ +R ++ + R +FLVT +P A +C PD+ PP F I CGDL+FS HT + M +L + +Y K A + +A ++A + HYT DV+ A+Y+ M+W+L A +N D G+
Sbjct: 34 LLFGLLW---QYLHNILHNLAYWIQSRLTPVQRTP--LYDVGFNLL----PEFTESQAKVSEYLVFGCIFGPSIVLLA------SVPFIKPKENGNVRY------VAVIAKRFLFHTAMCLFFRCCSFLVTALPGSAPHCRPMFNQTCLDANPINPFSCEVPNPDFQPPTTTSYYFFHIDALNGCGDLMFSSHTMYTMTFILTLFKYW-KSTALLVFMLCIQIAIAFCIVAARKHYTLDVISALYIVPMVWFLQDAYFADINHKDQGVT 280 The following BLAST results are available for this feature:
BLAST of EWM29203.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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