EWM29161.1, cds1537 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM29161.1
Unique Name	cds1537
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002457.1:893795..895321 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM29161.1
Product	peptidyl-prolyl cis-trans isomerase-like protein
Orig transcript id	gnl\|cribi\|Naga_100007g30.6488.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002457.1	supercontig	CM002457.1:893795..895321 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Biological Process**
Term	Definition
GO:0006464	cellular protein modification process
GO:0006457	protein folding
GO:0000413	protein peptidyl-prolyl isomerization

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0003723	RNA binding
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding
GO:0003755	peptidyl-prolyl cis-trans isomerase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR024936	Cyclophilin-type_PPIase
IPR029000	Cyclophilin-like_dom
IPR012677	Nucleotide-bd_a/b_plait
IPR000504	RRM_dom
IPR002130	Cyclophilin-type_PPIase_dom

Homology

[Close]

BLAST of EWM29161.1 vs. NCBI_GenBank
Match: gi|585111681|gb|EWM29161.1| (peptidyl-prolyl cis-trans isomerase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1036.17 bits (2678), Expect = 0.000e+0
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0

Query:    1 MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLKHSRPGLVCMASSGENQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRLIDLEDEEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRPRGSTKIKSRGAGFQERSPDASTLLSASSAARAGNGGGRNGKGSGLESGPRTSVPAPKSRWEESAAGKASHGAVEVSNRKRPASPTGYQEGRGRDSGGEAGGREGRKGRREAQGERSQRSRSRSLERIRKQIRRSGSPSRERRERRDGLRERDWRDRRERSRDRSQSRELRRRR 508
            MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLKHSRPGLVCMASSGENQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRLIDLEDEEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRPRGSTKIKSRGAGFQERSPDASTLLSASSAARAGNGGGRNGKGSGLESGPRTSVPAPKSRWEESAAGKASHGAVEVSNRKRPASPTGYQEGRGRDSGGEAGGREGRKGRREAQGERSQRSRSRSLERIRKQIRRSGSPSRERRERRDGLRERDWRDRRERSRDRSQSRELRRRR
Sbjct:    1 MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLKHSRPGLVCMASSGENQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRLIDLEDEEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRPRGSTKIKSRGAGFQERSPDASTLLSASSAARAGNGGGRNGKGSGLESGPRTSVPAPKSRWEESAAGKASHGAVEVSNRKRPASPTGYQEGRGRDSGGEAGGREGRKGRREAQGERSQRSRSRSLERIRKQIRRSGSPSRERRERRDGLRERDWRDRRERSRDRSQSRELRRRR 508

[Close]

BLAST of EWM29161.1 vs. NCBI_GenBank
Match: gi|298705082|emb|CBJ28541.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 476.478 bits (1225), Expect = 5.664e-160
Identity = 229/357 (64.15%), Postives = 280/357 (78.43%), Query Frame = 0

Query:    1 MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLKHSRPGLVCMASSG-ENQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRLIDLED---EEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRPRGSTKIKSRGAGFQERSP 353
            MSVM+ET+LGE+VVDL+C+  PLAAKNFLKLCK KYYN  L YNVQQNFMIQ GDP+ TG+GGTS+YG++YGEQA++FEDEI     KH   GL+ MA+ G  N N SQF+ +MRG+DM+ LDGKHT+F +V EG++T L+EIN  +CD +GRPYRD+RILHTYVLDDPFDDP  +  ++PD SP R RPE E V  RL  L+    E D  T    E+++RE  A   AVVLEMIGDLPDA++KPPENVLFVCKLNP+TTD+DLEIIF+RFGT  +AEICRD +TGDSLNYAFVEF+ +ESCEEA+KKMNN L+DDRRI+VDFSQSVAK+W++Y  R +G  K+ S   G   + P
Sbjct:   12 MSVMIETSLGEVVVDLFCEDAPLAAKNFLKLCKIKYYNGCLFYNVQQNFMIQAGDPTATGKGGTSVYGLMYGEQARFFEDEISATSRKHDEAGLLSMANMGVPNSNGSQFFFSMRGDDMQHLDGKHTVFAKVMEGMET-LEEINGQFCDDNGRPYRDIRILHTYVLDDPFDDPPQL--VVPDESPLRDRPEEEKVALRLGALDKVSLEADERTELEREKQLREKTARSNAVVLEMIGDLPDADMKPPENVLFVCKLNPVTTDDDLEIIFTRFGT-CRAEICRDHITGDSLNYAFVEFEAIESCEEAFKKMNNVLIDDRRIRVDFSQSVAKEWSKYKGRAQGGQKLASGKGGKPAQQP 364

[Close]

BLAST of EWM29161.1 vs. NCBI_GenBank
Match: gi|325183136|emb|CCA17594.1| (peptidylprolyl cistrans isomeraselike protein putati [Albugo laibachii Nc14])

HSP 1 Score: 451.825 bits (1161), Expect = 7.610e-153
Identity = 213/347 (61.38%), Postives = 270/347 (77.81%), Query Frame = 0

Query:    1 MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLKHSRPGLVCMASSGENQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRLIDLEDEEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRPRGSTKIKSRGAG 347
            MSV+L TTLG++V+DL+  +CP+A  NFLKLCK KYYN+VL +NVQ+NFMIQTGDP+GTG+GG S+YG LYG QA +F+DE R PQLKH+R G V MA++G N NTSQFYIT   +++E+LDGKHTIFG VAEG+D ++ +IN+L+ D D RPY+DVRILHT++LDDPF DPK  +   P +SP R RPE ESV  R+   E+ ED  TAE +E+ +RE EA  RAVVLEMIGD+PDA+IKPPE VLFVCKLNP+T   DL++ F RFG   K+E+ RD  TGDSL YAFVEF + + CEEAY KMNN L+DDRRIKVDFSQSV+K WN+++ + + S    ++ +G
Sbjct:    1 MSVLLATTLGDIVIDLFTQECPIACTNFLKLCKMKYYNNVLFFNVQENFMIQTGDPTGTGKGGDSLYGQLYGAQAHFFQDEFR-PQLKHNRKGTVAMANTGPNTNTSQFYITTHNDNLEYLDGKHTIFGHVAEGID-IIDKINQLFVDKDFRPYQDVRILHTFILDDPFPDPKNFQ--TPASSPTRDRPEEESVPVRMAADEEPEDERTAEEIEKSVREKEAKSRAVVLEMIGDIPDADIKPPEEVLFVCKLNPVTESSDLDMAFCRFG-ACKSEVIRDFKTGDSLCYAFVEFTEKKHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNQFSRKNKKSRVDDNQASG 342

[Close]

BLAST of EWM29161.1 vs. NCBI_GenBank
Match: gi|635372294|emb|CCI39515.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 447.203 bits (1149), Expect = 5.808e-151
Identity = 211/332 (63.55%), Postives = 261/332 (78.61%), Query Frame = 0

Query:    1 MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLKHSRPGLVCMASSGENQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRLIDLEDEEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYT 332
            MSV+L TTLG++V+DL+  +CP+A  NFLKLCK KYYN+VL +NVQ+NFMIQTGDP+GTG+GG S+YG LYG QA +F+DE     LKH+R G V MA++G N NTSQFYIT   E++E+LDGKHTIFG VAEG++ ++ +INEL+ D D RPY+DVRILHTY+LDDPF DPK  +   P +SPAR RPE ESV  R+   E+ EDG TAE +E+ +R  EA  RAVVLEMIGD+PDA+IKPPE VLFVCKLNP+T   DL++ F RFG   K+E+ RD  TGDSL YAFVEF + + CEEAY KMNN L+DDRRIKVDFSQSV+K WN+++
Sbjct:    1 MSVLLSTTLGDIVIDLFTQECPIACTNFLKLCKLKYYNNVLFFNVQENFMIQTGDPTGTGKGGDSMYGQLYGAQAHFFQDEFH-SNLKHNRKGTVAMANTGPNTNTSQFYITTSHENLEYLDGKHTIFGHVAEGIE-IIDKINELFVDKDYRPYQDVRILHTYILDDPFPDPKNFQ--APASSPARDRPEEESVPVRVAADEEPEDGRTAEEIEKSVRAKEAKSRAVVLEMIGDIPDADIKPPEEVLFVCKLNPVTESSDLDMAFCRFG-ACKSEVIRDYKTGDSLCYAFVEFTEKKHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNQFS 327

[Close]

BLAST of EWM29161.1 vs. NCBI_GenBank
Match: gi|1214688426|gb|OWZ04366.1| (Peptidyl-prolyl cis-trans isomerase [Phytophthora megakarya])

HSP 1 Score: 439.884 bits (1130), Expect = 3.338e-148
Identity = 219/345 (63.48%), Postives = 262/345 (75.94%), Query Frame = 0

Query:    1 MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLK----HSRPGLVCMASSGENQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRLIDLE--DEEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRPRGST 339
            MSV++ETTLG +V+DL+ +  PLA  NFLKLCKTKYY+  L +NVQ+NFM+QTGDP+ TG GG SIYG LYG QA++FEDE  LP++K      R GLV MAS   NQN SQFYIT R EDM +LD +HTIFGEVAEG+D VL +IN L+ D D RPY+DVRI HTYVLDDPF DPKG+++LIP +SP R RPE E V PRL   E  DE +G T + +E+ +RE EA  RAVVLEMIGDLPDA++KPPE VLFVCKLNP+T   DL++ F RFG+  K+E+ RD  TGDSL +AFVEF D + CEEAY KMNN L+DDRRIKVDFSQSV+K WN+   RP   T
Sbjct:    1 MSVLVETTLGTIVLDLFVEDAPLACTNFLKLCKTKYYHGCLFFNVQENFMVQTGDPTATGAGGDSIYGKLYGTQARFFEDE--LPKIKGRSHEDRSGLVGMASGSSNQNASQFYITTRAEDMAYLDEQHTIFGEVAEGMD-VLDQINSLFVDKDYRPYQDVRIKHTYVLDDPFPDPKGLDELIPPSSPTRERPEEEQVEPRLAADEKLDENEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCRFGS-CKSEVIRDQKTGDSLCFAFVEFTDRKDCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRRPWEKT 341

[Close]

BLAST of EWM29161.1 vs. NCBI_GenBank
Match: gi|695415014|ref|XP_009526451.1| (hypothetical protein PHYSODRAFT_264201, partial [Phytophthora sojae] >gi|348677576|gb|EGZ17393.1| hypothetical protein PHYSODRAFT_264201, partial [Phytophthora sojae])

HSP 1 Score: 434.491 bits (1116), Expect = 2.304e-147
Identity = 218/341 (63.93%), Postives = 257/341 (75.37%), Query Frame = 0

Query:    1 MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLK----HSRPGLVCMASSGENQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRLIDLE--DEEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRP 335
            MSV++ETT+G LV+DLY D+CP A  NFLKLCKTKYY+  L +NVQ+NFM+Q GDP+ TG GG SIYG LYG QA++FEDE  LP+ +     +R GL+ MAS   NQN SQFYIT R EDM +LD +HTIFGEVAEG+D VL  IN L+ D D RPY+DVRI HTYVLDDP  DPKG+E+LIP +SP R RPE E V PRL   E  DE +G T + +E+ +RE EA  RAVVLEMIGDLPDA++KPPE VLFVCKLNP+T   DL++ F RFG   KAE+ RD  TGDSL +AFVEF D   CEEAY KMNN L+DDRRIKVDFSQSV+K WN+   RP
Sbjct:    1 MSVLVETTVGALVLDLYVDECPRACTNFLKLCKTKYYHGCLFFNVQENFMVQAGDPTATGGGGDSIYGQLYGAQARFFEDE--LPKARGKTHEARSGLLGMASGSANQNASQFYITTRAEDMAYLDEQHTIFGEVAEGMD-VLATINSLFVDNDYRPYQDVRIKHTYVLDDPLPDPKGLEELIPPSSPTRERPEQEQVEPRLAADEKLDENEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCRFGP-CKAEVIRDQKTGDSLCFAFVEFMDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRRP 337

[Close]

BLAST of EWM29161.1 vs. NCBI_GenBank
Match: gi|301109355|ref|XP_002903758.1| (peptidyl-prolyl cis-trans isomerase-like protein [Phytophthora infestans T30-4] >gi|262096761|gb|EEY54813.1| peptidyl-prolyl cis-trans isomerase-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 439.499 bits (1129), Expect = 3.445e-147
Identity = 218/345 (63.19%), Postives = 260/345 (75.36%), Query Frame = 0

Query:    1 MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLK----HSRPGLVCMASSGENQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRLIDLE--DEEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRPRGST 339
            MSV++ETTLG LV+DL+ + CPLA  NFLKLCKTKYY+  L +NVQ+NFM+Q GDP+ TG GG SIYG LYG QA+YFEDE  LP+ K      R GL+ MAS+  NQN SQFYIT R EDM +LD +H+IFGEVAEG+D VL +IN L+ D D RPY+DVRI HTYVLDDPF DPKG+++LIP +SP R RPE E V PRL   E  DE +G T + +E+ +RE EA  RAVVLEMIGDLPDA+++PPE VLFVCKLNP+T   DL++ F RFG   K+E+ RD  TGDSL +AFVEF D   CEEAY KMNN L+DDRRIKVDFSQSV+K WN+   RP   T
Sbjct:    1 MSVLVETTLGALVLDLFVEDCPLACTNFLKLCKTKYYHGCLFFNVQENFMVQAGDPTATGTGGDSIYGKLYGAQARYFEDE--LPKTKGRSHEDRSGLLGMASASANQNASQFYITTRAEDMAYLDEQHSIFGEVAEGMD-VLDKINALFVDKDYRPYQDVRIKHTYVLDDPFPDPKGLDELIPPSSPTRERPEEEQVEPRLAADEKLDENEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVRPPEEVLFVCKLNPVTESADLDMAFCRFGP-CKSEVIRDQKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRRPWEKT 341

[Close]

BLAST of EWM29161.1 vs. NCBI_GenBank
Match: gi|570979808|gb|ETP40680.1| (hypothetical protein F442_12035, partial [Phytophthora parasitica P10297])

HSP 1 Score: 439.113 bits (1128), Expect = 9.758e-147
Identity = 220/345 (63.77%), Postives = 259/345 (75.07%), Query Frame = 0

Query:    1 MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLK----HSRPGLVCMASSGENQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRLIDLE--DEEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRPRGST 339
            MSV++ETTLG LV+DL+ + CPLA  NFLKLCKTKYY+  L +NVQ+NFM+Q GDP+ TG GG SIYG LYG QA++FEDE  LP+ K      R GLV MASS  NQN SQFYIT R EDM +LD +HTIFGEVAEG+D VL  IN L+ D D RP++DVRI HTYVLDDPF DPKG+++LIP +SP R RPE E V PRL   E  DE +G T + +E+ +RE EA  RAVVLEMIGDLPDA++KPPE VLFVCKLNP+T   DL++ F RFG   K+E+ RD  TGDSL +AFVEF D   CEEAY KMNN L+DDRRIKVDFSQSV+K WN+   RP   T
Sbjct:    1 MSVLVETTLGALVLDLFVEDCPLACTNFLKLCKTKYYHGCLFFNVQENFMVQAGDPTATGTGGDSIYGKLYGAQARFFEDE--LPKTKGRSHEDRSGLVGMASSSANQNASQFYITTRAEDMAYLDDQHTIFGEVAEGMD-VLDNINALFVDKDYRPFQDVRIKHTYVLDDPFPDPKGLDELIPPSSPTRERPEEEQVEPRLAADEKLDENEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCRFGP-CKSEVIRDHKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRRPWEKT 341

[Close]

BLAST of EWM29161.1 vs. NCBI_GenBank
Match: gi|566019918|gb|ETI42829.1| (hypothetical protein F443_12119 [Phytophthora parasitica P1569])

HSP 1 Score: 441.425 bits (1134), Expect = 1.311e-146
Identity = 220/345 (63.77%), Postives = 259/345 (75.07%), Query Frame = 0

Query:    1 MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLK----HSRPGLVCMASSGENQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRLIDLE--DEEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRPRGST 339
            MSV++ETTLG LV+DL+ + CPLA  NFLKLCKTKYY+  L +NVQ+NFM+Q GDP+ TG GG SIYG LYG QA++FEDE  LP+ K      R GLV MASS  NQN SQFYIT R EDM +LD +HTIFGEVAEG+D VL  IN L+ D D RP++DVRI HTYVLDDPF DPKG+++LIP +SP R RPE E V PRL   E  DE +G T + +E+ +RE EA  RAVVLEMIGDLPDA++KPPE VLFVCKLNP+T   DL++ F RFG   K+E+ RD  TGDSL +AFVEF D   CEEAY KMNN L+DDRRIKVDFSQSV+K WN+   RP   T
Sbjct:    1 MSVLVETTLGALVLDLFVEDCPLACTNFLKLCKTKYYHGCLFFNVQENFMVQAGDPTATGTGGDSIYGKLYGAQARFFEDE--LPKTKGRSHEDRSGLVGMASSSANQNASQFYITTRAEDMAYLDDQHTIFGEVAEGMD-VLDNINALFVDKDYRPFQDVRIKHTYVLDDPFPDPKGLDELIPPSSPTRERPEEEQVEPRLAADEKLDENEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCRFGP-CKSEVIRDHKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRRPWEKT 341

[Close]

BLAST of EWM29161.1 vs. NCBI_GenBank
Match: gi|567957251|gb|ETK82856.1| (hypothetical protein L915_11837 [Phytophthora parasitica])

HSP 1 Score: 441.425 bits (1134), Expect = 1.838e-146
Identity = 219/341 (64.22%), Postives = 258/341 (75.66%), Query Frame = 0

Query:    1 MSVMLETTLGELVVDLYCDKCPLAAKNFLKLCKTKYYNDVLVYNVQQNFMIQTGDPSGTGRGGTSIYGMLYGEQAKYFEDEIRLPQLK----HSRPGLVCMASSGENQNTSQFYITMRGEDMEFLDGKHTIFGEVAEGLDTVLKEINELYCDTDGRPYRDVRILHTYVLDDPFDDPKGIEDLIPDASPARGRPEAESVNPRLIDLE--DEEDGLTAEALEERIREVEANKRAVVLEMIGDLPDAEIKPPENVLFVCKLNPITTDEDLEIIFSRFGTGVKAEICRDPVTGDSLNYAFVEFDDVESCEEAYKKMNNALVDDRRIKVDFSQSVAKQWNRYTMRP 335
            MSV++ETTLG LV+DL+ + CPLA  NFLKLCKTKYY+  L +NVQ+NFM+Q GDP+ TG GG SIYG LYG QA++FEDE  LP+ K      R GLV MASS  NQN SQFYIT R EDM +LD +HTIFGEVAEG+D VL  IN L+ D D RP++DVRI HTYVLDDPF DPKG+++LIP +SP R RPE E V PRL   E  DE +G T + +E+ +RE EA  RAVVLEMIGDLPDA++KPPE VLFVCKLNP+T   DL++ F RFG   K+E+ RD  TGDSL +AFVEF D   CEEAY KMNN L+DDRRIKVDFSQSV+K WN+   RP
Sbjct:    1 MSVLVETTLGALVLDLFVEDCPLACTNFLKLCKTKYYHGCLFFNVQENFMVQAGDPTATGTGGDSIYGKLYGAQARFFEDE--LPKTKGRSHEDRSGLVGMASSSANQNASQFYITTRAEDMAYLDDQHTIFGEVAEGMD-VLDNINALFVDKDYRPFQDVRIKHTYVLDDPFPDPKGLDELIPPSSPTRERPEEEQVEPRLAADEKLDENEGRTEQEIEKAVREKEAKSRAVVLEMIGDLPDADVKPPEEVLFVCKLNPVTESADLDMAFCRFGP-CKSEVIRDHKTGDSLCFAFVEFTDRRHCEEAYFKMNNVLLDDRRIKVDFSQSVSKLWNKVKRRP 337

The following BLAST results are available for this feature:

BLAST of EWM29161.1 vs. NCBI_GenBank

BLAST of EWM29161.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585111681\|gb\|EWM29161.1\|	0.000e+0	100.00	peptidyl-prolyl cis-trans isomerase-like protein [...	[more]
gi\|298705082\|emb\|CBJ28541.1\|	5.664e-160	64.15	conserved unknown protein [Ectocarpus siliculosus]	[more]
gi\|325183136\|emb\|CCA17594.1\|	7.610e-153	61.38	peptidylprolyl cistrans isomeraselike protein puta...	[more]
gi\|635372294\|emb\|CCI39515.1\|	5.808e-151	63.55	unnamed protein product [Albugo candida]	[more]
gi\|1214688426\|gb\|OWZ04366.1\|	3.338e-148	63.48	Peptidyl-prolyl cis-trans isomerase [Phytophthora ...	[more]
gi\|695415014\|ref\|XP_009526451.1\|	2.304e-147	63.93	hypothetical protein PHYSODRAFT_264201, partial [P...	[more]
gi\|301109355\|ref\|XP_002903758.1\|	3.445e-147	63.19	peptidyl-prolyl cis-trans isomerase-like protein [...	[more]
gi\|570979808\|gb\|ETP40680.1\|	9.758e-147	63.77	hypothetical protein F442_12035, partial [Phytopht...	[more]
gi\|566019918\|gb\|ETI42829.1\|	1.311e-146	63.77	hypothetical protein F443_12119 [Phytophthora para...	[more]
gi\|567957251\|gb\|ETK82856.1\|	1.838e-146	64.22	hypothetical protein L915_11837 [Phytophthora para...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna1540	rna1540	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications