EWM29156.1, cds1536 (CDS) Nannochloropsis gaditana

Overview
NameEWM29156.1
Unique Namecds1536
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:891680..891724 -
Alignment locationCM002457.1:891561..891584 -
Alignment locationCM002457.1:891319..891459 -
Alignment locationCM002457.1:889456..891123 -

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Properties
Property NameValue
Protein idEWM29156.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100007g31.6483.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:891680..891724 -
CM002457.1supercontigCM002457.1:891561..891584 -
CM002457.1supercontigCM002457.1:891319..891459 -
CM002457.1supercontigCM002457.1:889456..891123 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29156.1 vs. NCBI_GenBank
Match: gi|585111676|gb|EWM29156.1| (hypothetical protein Naga_100007g31 [Nannochloropsis gaditana])

HSP 1 Score: 1284.63 bits (3323), Expect = 0.000e+0
Identity = 625/625 (100.00%), Postives = 625/625 (100.00%), Query Frame = 0 
Query:    1 MDIYYPKDNAVSHGKVHELLDAEAMKRGEPLAEESIRWLLELHGEMFLIEQHYSIRTRTRRLALNGTPVAEFSDVEPMVDFQLGTTNIRMSFTVRGKGIVYELLVNGVRFEDLTQALPSPIASCAEGSGMTFGEPLTHHRLGLLPPHLIQFQPQPAMDMIAMAHVESSLSSPYSHPRHRRNSTFGSIISLLEETTAVLPALDSSPSFTALPGRHSRHPSTASRHRHFNLEVNAIQDDVYSALMSGTELIGRERAGRGTQSMEGLKLAETESGAFCENTTSVATTLSSMASWKNAAVTNPSEGMIGFGVAFTTASGMDTRLLSHEQQPISKEAARQCSRQDPVAITSAEYHGQCESSAVAHVECPTMPLKEDEGPRQAQAHRGSGNIGALLPHGAGILQPHSIMQAHEGVVDLPSRLSDPKTDDNRAVARRRREPSDCQGIQQQQQLQLEREQQPFHPLASFASSSNLQCRDGAKAAEDAEPLRRPRLKMAKTSPTVRPARPTAHIRRRSHGSIDDLKSVGDRAMMAELASIPVEEEVEAVKEEYALFHGGHDSANNGKGQSFAQERRFQHLKEPPTLLRSLSASDVMERPPNLKILVPAPPTSIARGGLAGRNLKSLGVALSQPR 625
            MDIYYPKDNAVSHGKVHELLDAEAMKRGEPLAEESIRWLLELHGEMFLIEQHYSIRTRTRRLALNGTPVAEFSDVEPMVDFQLGTTNIRMSFTVRGKGIVYELLVNGVRFEDLTQALPSPIASCAEGSGMTFGEPLTHHRLGLLPPHLIQFQPQPAMDMIAMAHVESSLSSPYSHPRHRRNSTFGSIISLLEETTAVLPALDSSPSFTALPGRHSRHPSTASRHRHFNLEVNAIQDDVYSALMSGTELIGRERAGRGTQSMEGLKLAETESGAFCENTTSVATTLSSMASWKNAAVTNPSEGMIGFGVAFTTASGMDTRLLSHEQQPISKEAARQCSRQDPVAITSAEYHGQCESSAVAHVECPTMPLKEDEGPRQAQAHRGSGNIGALLPHGAGILQPHSIMQAHEGVVDLPSRLSDPKTDDNRAVARRRREPSDCQGIQQQQQLQLEREQQPFHPLASFASSSNLQCRDGAKAAEDAEPLRRPRLKMAKTSPTVRPARPTAHIRRRSHGSIDDLKSVGDRAMMAELASIPVEEEVEAVKEEYALFHGGHDSANNGKGQSFAQERRFQHLKEPPTLLRSLSASDVMERPPNLKILVPAPPTSIARGGLAGRNLKSLGVALSQPR
Sbjct:    1 MDIYYPKDNAVSHGKVHELLDAEAMKRGEPLAEESIRWLLELHGEMFLIEQHYSIRTRTRRLALNGTPVAEFSDVEPMVDFQLGTTNIRMSFTVRGKGIVYELLVNGVRFEDLTQALPSPIASCAEGSGMTFGEPLTHHRLGLLPPHLIQFQPQPAMDMIAMAHVESSLSSPYSHPRHRRNSTFGSIISLLEETTAVLPALDSSPSFTALPGRHSRHPSTASRHRHFNLEVNAIQDDVYSALMSGTELIGRERAGRGTQSMEGLKLAETESGAFCENTTSVATTLSSMASWKNAAVTNPSEGMIGFGVAFTTASGMDTRLLSHEQQPISKEAARQCSRQDPVAITSAEYHGQCESSAVAHVECPTMPLKEDEGPRQAQAHRGSGNIGALLPHGAGILQPHSIMQAHEGVVDLPSRLSDPKTDDNRAVARRRREPSDCQGIQQQQQLQLEREQQPFHPLASFASSSNLQCRDGAKAAEDAEPLRRPRLKMAKTSPTVRPARPTAHIRRRSHGSIDDLKSVGDRAMMAELASIPVEEEVEAVKEEYALFHGGHDSANNGKGQSFAQERRFQHLKEPPTLLRSLSASDVMERPPNLKILVPAPPTSIARGGLAGRNLKSLGVALSQPR 625
The following BLAST results are available for this feature:
BLAST of EWM29156.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111676|gb|EWM29156.1|0.000e+0100.00hypothetical protein Naga_100007g31 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1539rna1539Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications