EWM29177.1, cds1502 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29177.1 vs. NCBI_GenBank
Match: gi|585111697|gb|EWM29177.1| (deah (asp-glu-ala-his) box polypeptide 35 [Nannochloropsis gaditana]) HSP 1 Score: 1461.05 bits (3781), Expect = 0.000e+0 Identity = 709/709 (100.00%), Postives = 709/709 (100.00%), Query Frame = 0
Query: 1 MAFWKPGTAAPQLGLERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALGGMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAFSTLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKGRESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYKPKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYGAPAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAYGGGKGTSISTSTNIC 709
MAFWKPGTAAPQLGLERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALGGMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAFSTLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKGRESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYKPKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYGAPAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAYGGGKGTSISTSTNIC
Sbjct: 1 MAFWKPGTAAPQLGLERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALGGMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAFSTLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKGRESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYKPKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYGAPAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAYGGGKGTSISTSTNIC 709
BLAST of EWM29177.1 vs. NCBI_GenBank
Match: gi|298708735|emb|CBJ30697.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 738.028 bits (1904), Expect = 0.000e+0 Identity = 378/718 (52.65%), Postives = 500/718 (69.64%), Query Frame = 0
Query: 3 FWKPGTAAPQLGLERPTGLSETEAGDTIGYNPHY-RLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEH---------------LNALG-GMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAF-STLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKGRESRTIQEA--AMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYKPKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYGAPAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAYGGGKGT 700
FWKPGT+ P GLER G D P +LP + Q+ LPI R R ++L+A+++++ +VLVGETG GK+TQ+PQYLHE+GWT G+R V+CTQPRRVAA TVA RVAEEMG +LG VGY+VRFDSRV G T++KF TDG+LLRE + DPLL+AYSV++LDEAHER++Y D+L GLLKK+ ++R ELR++++SAT DAE FRDFFET T ++ + TI+SI GRQH VDV Y K NY+R+AVD L++ SE GDVL+FLPG EEID AV +++H A G G + VLP +S+LP + QMK +P +R R+++ AT IAETS+TI+ IR+++D GF++LP YD GF +L+TT S+ASA QRAGRAGR PGKC RL TEE + + L A T PE+QRS+L+W++L LKALGID ++ F+F++ P+AE ++R LELLYALGALDD CRLT LG MAEFPVEP LAK L +++DF C E+ALT+ A+L VQN + +P+G + AM E A +GDH+T L ++ ++E G +EWC E+ LN R+L RA EIR QL RY +++ P G +SC DD ALRRC++ GFF N A+L DGRY TVRD VA+H +SVLA +G+P EWI++N++ TS+ F RD S + P WL+ELAPHFY + G G+
Sbjct: 4 FWKPGTSGPG-GLERGDGSESLHIVD-----PKLSKLPLQTQRHALPIYRHRNSVLFAVQKHRAIVLVGETGCGKTTQIPQYLHEAGWTAGNRAVVCTQPRRVAAFTVATRVAEEMGSRLGETVGYSVRFDSRV---GPATKVKFCTDGMLLREMMLDPLLTAYSVVMLDEAHERTIYNDILFGLLKKIMRKRKELRVIVASATLDAEQFRDFFETNTNNNANANTA-------TILSIQGRQHPVDVLYTEKPVSNYVRAAVDAALAVHSSEPVGDVLIFLPGAEEIDAAVEMLRDHAPQSATSGKWGGWGGSTAKGVGEGGPLQVLPFYSALPINTQMKVFEP-TRQGVRRIVVATTIAETSVTIDRIRYVIDPGFIRLPFYDPAQGFGALLTTLTSKASAKQRAGRAGRVSPGKCLRLMTEEDYHAQLPAQTIPEMQRSDLSWVVLLLKALGIDDILHFEFLSPPAAETMIRALELLYALGALDDSCRLTEPLGMTMAEFPVEPCLAKFLASAWDFGCVEDALTVAAMLSVQNPFVHPRGGGRERRERVREAMEEFAVTEGDHITYLNVFNSFDETGNDSEWCKENCLNHRALVRAGEIRQQLSRYCKKFAPPGQHVSSCGDDVNALRRCLVAGFFANVAKLSPDGRYRTVRDSTVVAIHPSSVLAHFGSPPEWILFNEISKTSQLFARDVSVVDPRWLIELAPHFYEFRGAGGS 704
BLAST of EWM29177.1 vs. NCBI_GenBank
Match: gi|947213060|ref|XP_014441642.1| (PREDICTED: probable ATP-dependent RNA helicase DHX35 [Tupaia chinensis]) HSP 1 Score: 691.034 bits (1782), Expect = 0.000e+0 Identity = 348/699 (49.79%), Postives = 479/699 (68.53%), Query Frame = 0
Query: 1 MAFWKPGTAAPQLGL-ERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALG--GMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAFSTLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKGRESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYK-PKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYGAPAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAYG 695
+ FW+PGT P + + E L+E +G TI YNP+ L +QQ+ LP+ + R +ILY +E Y+TVV+VGETG GKSTQ+PQYL E+GWT RVV TQPRRVAA+TVA RVAEE G LG VGY +RFD D TRIKF+TDG+L+RE + DPLL+ YSVI+LDEAHER++YTD+ +GLLKK++K+R +LR++++SAT DAE FRDFF +E S+ + I+++ GR VD+FYL +Y++S VDTV+ I ++EG GD+L FL G EE++ V + E AL GM+ + VLP+++ LP QMK + SR V RKVI ATN+AETS+TI GI +++DCGFVKL Y+ RT E LV VS+ASA QRAGR GR GKC+RLYTEEAF L T PE+QRSNLA +ILQLKALGID V+ F F++ P A+++++ LELLYALG LD CRLT LG ++AEFP+ P AK+LL S +F C++E L++ A++Q+QN++ P ++S+ I+ + A +GDHLT+L +Y + + ++++WC EHFLN + L RA +R QL++ L +++ PK S D + + RC+++GFF NAAR S G Y T+RD H + +H SVL P W++YN+V+ TS+ ++RD + I+ WL+ELAPHFY G
Sbjct: 8 VKFWRPGTEGPGVSISEERQSLTEN-SGTTIVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLA--TRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAERFRDFFN-------QNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVDTVVKIHQTEGDGDILAFLTGQEEVESVVAMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFKRVSRSV-RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIR--VHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPK----KSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG 688
BLAST of EWM29177.1 vs. NCBI_GenBank
Match: gi|637297622|ref|XP_003220640.2| (PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X2 [Anolis carolinensis]) HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0 Identity = 346/698 (49.57%), Postives = 475/698 (68.05%), Query Frame = 0
Query: 1 MAFWKPGTAAPQLGLERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALG--GMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAFSTLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKGRESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYK-PKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYGAPAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAYG 695
M FWKPGT P + L ++ YNP+ L +QQ+ LP+ + R +ILY +E Y+T+V+VGETG GKSTQ+PQYL E+GWT R+V TQPRRVA +++A RVAEE G LG VGY +RFD D TRIKF+TDG+L+RE + DPLL+ YSVI+LDEAHER++YTD+ +GLLKKV+K+R +LR++++SAT DAE FRDFF +E S+ S S I+++ GR VDVFY+ +Y++S V+TV+ I ++EG GD+L FL G EE++ V + E L GM+ + VLP+++ LP QMK + S +V RKVI ATNIAETS+TI GI F++DCGFVKL Y+ +T E LV VS+ASA QRAGRAGR GKC+RLYTEE F L T PE+QRSNLA +ILQLKALGID V+ F F++ P A+++++ LELLYALG LD CRLT LG ++AEFP+ P AK+LL S +F C++E L++ A++Q+QN++ P ++S+ I+E + A +GDHLT+L +Y + + +S++WC +HFLN + L RA +R QL++ L ++K PK SC D + + RC+++GFF NAAR S G Y T+RD H + +H TSVL P W+VYN+V+ TS+ ++RD + I+ WL+ELAPHFY G
Sbjct: 8 MKFWKPGTDGPGVNLSEERQSPAESGCVSVIYNPYVSLSIEQQRQKLPVFKLRNHILYLVENYQTLVIVGETGCGKSTQIPQYLMEAGWTAEGRIVGVTQPRRVACVSIAGRVAEERGALLGHEVGYCIRFDDCTDPQA--TRIKFLTDGMLVREMMADPLLTRYSVIMLDEAHERTLYTDIAIGLLKKVQKKRGDLRLIVASATLDAEKFRDFFN-------QNETSDPSKDTSMILTVEGRTFPVDVFYIQSPVPDYVKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARILARTGMKKHLRVLPMYAGLPASEQMKVFERVSHNV-RKVIVATNIAETSITINGISFVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNHSGKCYRLYTEEDFEKLPQSTIPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDKYCRLTEPLGIRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFIIPPNQKSQAIREH--RKFAVEEGDHLTMLNVYEAFIKHNKSSQWCQDHFLNYKGLVRATAVREQLKKLLVKFKVPK----KSCEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPTSVLYA-EKPPRWVVYNEVIQTSKYYMRDVTTIESAWLLELAPHFYQQG 688
BLAST of EWM29177.1 vs. NCBI_GenBank
Match: gi|795108381|ref|XP_011830355.1| (PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Mandrillus leucophaeus] >gi|795478546|ref|XP_011892408.1| PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Cercocebus atys]) HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0 Identity = 347/699 (49.64%), Postives = 482/699 (68.96%), Query Frame = 0
Query: 1 MAFWKPGTAAPQLGL-ERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALG--GMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAFSTLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKGRESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYK-PKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYGAPAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAYG 695
+ FW+PGT P + + E L+E +G T+ YNP+ L +QQ+ LP+ + R +ILY +E Y+TVV+VGETG GKSTQ+PQYL E+GWT RVV TQPRRVAA+TVA RVAEE G LG VGY +RFD D+ TRIKF+TDG+L+RE + DPLL+ YSVI+LDEAHER++YTD+ +GLLKK++K+R +LR++++SAT DA+ FRDFF +E S+ + S I+++ GR VDVFYL +Y++S V+TV+ I ++EG GD+L FL G EE++ V + E AL GM+ + VLP+++ LP QMK + SR V RKVI ATN+AETS+TI GI +++DCGFVKL Y+ RT E LV VS+ASA QRAGR GR+ GKC+RLYTEEAF L T PE+QRSNLA +ILQLKALGID V+ F F++ P A+++++ LELLYALG LD CRLT LG ++AEFP+ P AK+LL S +F C++E L++ A++Q+QN++ P ++S+ I+ + A +GDHLT+L +Y + + ++++WC EHFLN + L RA +R QL++ L +++ PK S D + + RC+++GFF NAAR S G Y T+RD H + +H SVL P W++YN+V+ TS+ ++RD + I+ WL+ELAPHFY G
Sbjct: 8 VKFWRPGTEGPGVSISEERQSLTEN-SGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLA--TRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFN-------QNETSDPARDTSVILTVEGRTFPVDVFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV-RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSQAIR--VHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPK----KSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG 688
BLAST of EWM29177.1 vs. NCBI_GenBank
Match: gi|556959575|ref|XP_005990471.1| (PREDICTED: probable ATP-dependent RNA helicase DHX35 [Latimeria chalumnae]) HSP 1 Score: 689.878 bits (1779), Expect = 0.000e+0 Identity = 349/700 (49.86%), Postives = 482/700 (68.86%), Query Frame = 0
Query: 1 MAFWKPGTAAPQLGLERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFY-LSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALG--GMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAFSTLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKGRESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYK-PKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYG-APAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAYG 695
M FWKPGT P + + AG T+ YNP+ L +QQ+ LP+ + R +ILY +E Y+TVV+VGETG GKSTQ+PQYL E+GWT +VV TQPRRVAA++VA RVAEE G LG VGY++RFD D TRIKF+TDG+L+RE + DPLL YSV++LDEAHER++YTD+L+GLLKK++K+R +LR++++SAT DAE F++FF +E ++ N I++I GR VD+FY LS P +Y+++ V+TV+ I ++E GD+L FL G EE++ V V E AL GM+ + VLP+++ LP+ QMK + S +V RKV+ ATNIAETS+TI GI F++DCGFVKL Y T ESLV VS+ASA QRAGRAGR GKC+R++TEE F L + T PE+QRSNLA +ILQLKALGID V+ F F++ P A+++++ LELLYALG +D+ C+LT LG +MAEFP+ P AK+LL S F C+EE L++ A++Q+QNV+ P ++++ QE + A +GDHLT+L +Y + + +S++WC EHFLN + L RA +R QL+R L ++K PK S D + + RC+++GFF NAA+L G Y T+RD H + +H TSVL YG P +W+VYN+V+ TS ++RD + ++P WL+ELAPHFY G
Sbjct: 8 MKFWKPGTEGPGSSISEDRQSTTETAGTTVVYNPYASLSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGKVVGVTQPRRVAAVSVAGRVAEERGAVLGHEVGYSIRFDDCSDPQA--TRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERTLYTDILIGLLKKIQKKRGDLRLIVASATLDAEKFKEFFN-------RNETNDPINDTCAIMTIQGRTFPVDIFYTLSPVP-DYVKATVETVMKIHQNETDGDILAFLTGQEEVERVVAMVIEQARALSRSGMKKHLRVLPMYAGLPYSEQMKVFERVSHNV-RKVVVATNIAETSITINGIVFVIDCGFVKLRAYHPETAIESLVVVPVSQASAKQRAGRAGRNRSGKCYRVFTEEDFEKLPSATVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLYALGGVDEHCQLTDPLGLRMAEFPLNPMYAKMLLESGKFGCSEEILSVAAMMQIQNVFVTPPNQKAQAAQE--HRKFAVSEGDHLTMLNVYEAFIKHEKSSQWCQEHFLNYKGLVRATAVREQLKRLLSKFKLPK----TSSEGDPDPVLRCIVSGFFGNAAKLHYTGSYRTIRDDHELHIHPTSVL--YGEKPPQWVVYNEVIQTSRYYMRDITAVEPSWLLELAPHFYQQG 688
BLAST of EWM29177.1 vs. NCBI_GenBank
Match: gi|402882527|ref|XP_003904791.1| (PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Papio anubis]) HSP 1 Score: 689.878 bits (1779), Expect = 0.000e+0 Identity = 346/699 (49.50%), Postives = 482/699 (68.96%), Query Frame = 0
Query: 1 MAFWKPGTAAPQLGL-ERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALG--GMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAFSTLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKGRESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYK-PKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYGAPAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAYG 695
+ FW+PGT P + + E L+E +G T+ YNP+ L +QQ+ LP+ + R +ILY +E Y+TVV+VGETG GKSTQ+PQYL E+GWT RVV TQPRRVAA+TVA RVAEE G LG VGY +RFD D+ TRIKF+TDG+L+RE + DPLL+ YSVI+LDEAHER++YTD+ +GLLKK++K+R +LR++++SAT DA+ FRDFF +E S+ + S I+++ GR VD+FYL +Y++S V+TV+ I ++EG GD+L FL G EE++ V + E AL GM+ + VLP+++ LP QMK + SR V RKVI ATN+AETS+TI GI +++DCGFVKL Y+ RT E LV VS+ASA QRAGR GR+ GKC+RLYTEEAF L T PE+QRSNLA +ILQLKALGID V+ F F++ P A+++++ LELLYALG LD CRLT LG ++AEFP+ P AK+LL S +F C++E L++ A++Q+QN++ P ++S+ I+ + A +GDHLT+L +Y + + ++++WC EHFLN + L RA +R QL++ L +++ PK S D + + RC+++GFF NAAR S G Y T+RD H + +H SVL P W++YN+V+ TS+ ++RD + I+ WL+ELAPHFY G
Sbjct: 8 VKFWRPGTEGPGVSISEERQSLTEN-SGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLA--TRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFN-------QNETSDPARDTSVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV-RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSQAIR--VHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAVTVREQLKKLLVKFQVPK----KSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG 688
BLAST of EWM29177.1 vs. NCBI_GenBank
Match: gi|544465671|ref|XP_005569055.1| (PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Macaca fascicularis] >gi|795454815|ref|XP_011764991.1| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Macaca nemestrina] >gi|966966503|ref|XP_001088680.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Macaca mulatta] >gi|355563138|gb|EHH19700.1| hypothetical protein EGK_02412 [Macaca mulatta] >gi|355784490|gb|EHH65341.1| hypothetical protein EGM_02087 [Macaca fascicularis]) HSP 1 Score: 689.878 bits (1779), Expect = 0.000e+0 Identity = 346/699 (49.50%), Postives = 482/699 (68.96%), Query Frame = 0
Query: 1 MAFWKPGTAAPQLGL-ERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALG--GMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAFSTLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKGRESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYK-PKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYGAPAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAYG 695
+ FW+PGT P + + E L+E +G T+ YNP+ L +QQ+ LP+ + R +ILY +E Y+TVV+VGETG GKSTQ+PQYL E+GWT RVV TQPRRVAA+TVA RVAEE G LG VGY +RFD D+ TRIKF+TDG+L+RE + DPLL+ YSVI+LDEAHER++YTD+ +GLLKK++K+R +LR++++SAT DA+ FRDFF +E S+ + S I+++ GR VD+FYL +Y++S V+TV+ I ++EG GD+L FL G EE++ V + E AL GM+ + VLP+++ LP QMK + SR V RKVI ATN+AETS+TI GI +++DCGFVKL Y+ RT E LV VS+ASA QRAGR GR+ GKC+RLYTEEAF L T PE+QRSNLA +ILQLKALGID V+ F F++ P A+++++ LELLYALG LD CRLT LG ++AEFP+ P AK+LL S +F C++E L++ A++Q+QN++ P ++S+ I+ + A +GDHLT+L +Y + + ++++WC EHFLN + L RA +R QL++ L +++ PK S D + + RC+++GFF NAAR S G Y T+RD H + +H SVL P W++YN+V+ TS+ ++RD + I+ WL+ELAPHFY G
Sbjct: 8 VKFWRPGTEGPGVSISEERQSLTEN-SGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLA--TRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFN-------QNETSDPARDTSVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV-RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSQAIR--VHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPK----KSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG 688
BLAST of EWM29177.1 vs. NCBI_GenBank
Match: gi|403290669|ref|XP_003936432.1| (PREDICTED: probable ATP-dependent RNA helicase DHX35 [Saimiri boliviensis boliviensis] >gi|1044340338|ref|XP_017367451.1| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Cebus capucinus imitator]) HSP 1 Score: 689.493 bits (1778), Expect = 0.000e+0 Identity = 346/699 (49.50%), Postives = 481/699 (68.81%), Query Frame = 0
Query: 1 MAFWKPGTAAPQLGL-ERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALG--GMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAFSTLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKGRESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYK-PKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYGAPAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAYG 695
+ FW+PGT P + + E L+E +G T+ YNP+ L +QQ+ LP+ + R +ILY +E Y+TVV+VGETG GKSTQ+PQYL E+GWT RVV TQPRRVAA+TVA RVAEE G LG VGY +RFD D+ TRIKF+TDG+L+RE + DPLL+ YSVI+LDEAHER++YTD+ +GLLKK++K+R +LR++++SAT DAE FRDFF +E S+ + I+++ GR VD+FYL +Y++S V+TV+ I ++EG GD+L FL G EE++ V + E AL GM+ + VLP+++ LP QMK + SR V RKVI ATN+AETS+TI GI +++DCGFVKL Y+ RT E LV VS+ASA QRAGR GR+ GKC+RLYTEEAF L T PE+QRSNLA +ILQLKALGID V+ F F++ P A+++++ LELLYALG LD CRLT LG ++AEFP+ P AK+LL S +F C++E L++ A++Q+QN++ P ++S+ I+ + A +GDHLT+L +Y + + ++++WC EHFLN + L RA +R QL++ L +++ PK S D + + RC+++GFF NAAR S G Y T+RD H + +H SVL P W++YN+V+ TS+ ++RD + I+ WL+ELAPHFY G
Sbjct: 8 VKFWRPGTEGPGVSISEERQSLAEN-SGTTVVYNPYASLSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLA--TRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFN-------QNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV-RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSQAIR--VHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPK----KSSEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG 688
BLAST of EWM29177.1 vs. NCBI_GenBank
Match: gi|1012017693|ref|XP_016008793.1| (PREDICTED: probable ATP-dependent RNA helicase DHX35 [Rousettus aegyptiacus]) HSP 1 Score: 689.108 bits (1777), Expect = 0.000e+0 Identity = 347/699 (49.64%), Postives = 479/699 (68.53%), Query Frame = 0
Query: 1 MAFWKPGTAAPQLGL-ERPTGLSETEAGDTIGYNPHYRLPFKQQKLLLPIARARENILYALERYKTVVLVGETGSGKSTQVPQYLHESGWTQGDRVVLCTQPRRVAAITVAARVAEEMGCKLGGIVGYAVRFDSRVDEGGSRTRIKFVTDGLLLRETLYDPLLSAYSVIILDEAHERSMYTDVLLGLLKKVRKRRPELRIMISSATADAETFRDFFETFTYKGVSSEQSEGSNHDSTIVSITGRQHAVDVFYLSKAPRNYLRSAVDTVLSIIESEGRGDVLVFLPGMEEIDEAVVTVKEHLNALG--GMENVVLVLPLHSSLPHHLQMKALQPPSRHVERKVIFATNIAETSLTIEGIRFIVDCGFVKLPVYDVRTGFESLVTTSVSRASATQRAGRAGRTGPGKCFRLYTEEAFSTLSAHTTPEVQRSNLAWMILQLKALGIDQVMTFDFIAQPSAEALMRGLELLYALGALDDRCRLTPDLGEKMAEFPVEPRLAKLLLASFDFHCTEEALTLVALLQVQNVWTNPKGRESRTIQEAAMAELASRDGDHLTLLAIYREWEEAGRSTEWCSEHFLNPRSLTRAREIRGQLRRYLERYK-PKGSVFASCVDDSEALRRCVLTGFFFNAARLKSDGRYYTVRDGHPVALHSTSVLAKYGAPAEWIVYNDVVITSEPFLRDCSRIQPLWLMELAPHFYAYG 695
+ FW+PGT P + + E L+E A T+ YNP+ L +QQ+ LP+ + R +ILY +E Y+TVV+VGETG GKSTQ+PQYL E+GWT RVV TQPRRVAA+TVA RVA+E G LG VGY +RFD D TRIKF+TDG+L+RE + DPLL+ YS I+LDEAHER++YTD+ +GLLKK++K+R +LR++++SAT DAE FRDFF +E S+ + I+++ GR VD+FYL +Y++S V+TV+ I ++EG GD+L FL G EE++ AV + E ALG GM+ + VLP+++ LP QMK + SR V RKVI ATN+AETS+TI GI +++DCGFVKL Y+ RT E LV VS+ASA QRAGR GR GKC+RLYTEEAF L T PE+QRSNLA +ILQLKALGID V+ F F++ P A+++++ LELLYALG LD CRLT LG ++AEFP+ P AK+LL S +F C++E L++ A++Q+QN++ P ++S+ I+ A + A +GDHLT+L +Y + + +++ WC EHFLN + L RA +R QL++ L +++ PK S D + + RC+++GFF NAAR S G Y T+RD H + +H SVL P W++YN+V+ TS+ ++RD + I+ WL+ELAPHFY G
Sbjct: 8 VKFWRPGTEGPGVSISEERQSLAENSA-TTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDSLA--TRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFN-------QNETSDPTMDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETAVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSV-RKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIR--AHRKFAVEEGDHLTMLNVYEAFIKHNKNSRWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPK----KSSEGDPDPVLRCIISGFFANAARFHSTGAYRTIRDDHELHIHPASVLYA-EKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG 688 The following BLAST results are available for this feature:
BLAST of EWM29177.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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