EWM30672.1, cds15 (CDS) Nannochloropsis gaditana

Overview
NameEWM30672.1
Unique Namecds15
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:48607..48914 -
Alignment locationCM002455.1:48246..48372 -
Alignment locationCM002455.1:48001..48056 -
Alignment locationCM002455.1:47724..47819 -
Alignment locationCM002455.1:47506..47584 -
Alignment locationCM002455.1:47252..47310 -
Alignment locationCM002455.1:47087..47138 -
Alignment locationCM002455.1:46790..46904 -
Alignment locationCM002455.1:46641..46694 -
Alignment locationCM002455.1:46411..46519 -
Alignment locationCM002455.1:45467..46264 -
Alignment locationCM002455.1:45133..45238 -
Alignment locationCM002455.1:44839..44940 -
Alignment locationCM002455.1:44587..44720 -
Alignment locationCM002455.1:43877..44363 -
Alignment locationCM002455.1:43492..43619 -
Alignment locationCM002455.1:43176..43386 -
Alignment locationCM002455.1:42819..43048 -
Alignment locationCM002455.1:42504..42698 -
Alignment locationCM002455.1:42194..42302 -
Alignment locationCM002455.1:41711..41967 -
Alignment locationCM002455.1:40527..41533 -
Alignment locationCM002455.1:40282..40379 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30672.1
Productconserved uncharacterized protein
Orig transcript idgnl|cribi|Naga_100091g2.5721.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:48607..48914 -
CM002455.1supercontigCM002455.1:48246..48372 -
CM002455.1supercontigCM002455.1:48001..48056 -
CM002455.1supercontigCM002455.1:47724..47819 -
CM002455.1supercontigCM002455.1:47506..47584 -
CM002455.1supercontigCM002455.1:47252..47310 -
CM002455.1supercontigCM002455.1:47087..47138 -
CM002455.1supercontigCM002455.1:46790..46904 -
CM002455.1supercontigCM002455.1:46641..46694 -
CM002455.1supercontigCM002455.1:46411..46519 -
CM002455.1supercontigCM002455.1:45467..46264 -
CM002455.1supercontigCM002455.1:45133..45238 -
CM002455.1supercontigCM002455.1:44839..44940 -
CM002455.1supercontigCM002455.1:44587..44720 -
CM002455.1supercontigCM002455.1:43877..44363 -
CM002455.1supercontigCM002455.1:43492..43619 -
CM002455.1supercontigCM002455.1:43176..43386 -
CM002455.1supercontigCM002455.1:42819..43048 -
CM002455.1supercontigCM002455.1:42504..42698 -
CM002455.1supercontigCM002455.1:42194..42302 -
CM002455.1supercontigCM002455.1:41711..41967 -
CM002455.1supercontigCM002455.1:40527..41533 -
CM002455.1supercontigCM002455.1:40282..40379 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011333BTB/POZ_fold
IPR011043Gal_Oxase/kelch_b-propeller
IPR017986WD40_repeat_dom
IPR015915Kelch-typ_b-propeller
IPR013069BTB_POZ
IPR015943WD40/YVTN_repeat-like_dom
IPR000210BTB/POZ-like
IPR001680WD40_repeat
Homology
BLAST of EWM30672.1 vs. NCBI_GenBank
Match: gi|585113368|gb|EWM30672.1| (conserved uncharacterized protein [Nannochloropsis gaditana])

HSP 1 Score: 3357 bits (8703), Expect = 0.000e+0
Identity = 1638/1638 (100.00%), Postives = 1638/1638 (100.00%), Query Frame = 0
Query:    1 MNDWRTDVLCEGKGFHPRQFEYSPHVPDRLVFGTIRGEVVICEGSPNSRSAKACGRRKDVEPHAGRGMQVREGDRRGAKRIVRQLGNSTETHFAKHDYDSILGLSWLKKHPSKLLVGSSAGVIQLCDIEREAWETENAIVLTYEEFDRLTSLHGNCDDTCVLVSGYSHTVQLYDTQTGAIVRRFEGIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRCAGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLKGLPKTGLADNYTRAYYTASGRAILSGSSEEQDVRVHCAQTGDALASFEAYPGRRHHSLYVQSLRGDPLCDHRFSILVNYRDASFPLEIISIDMLGDGHSHTLQAATSALFPFPSPRPLPSIPEGKLDIVPMSSSLAFRGPDGNGGHAELSSCESLSRGREGQKETMDVEQEDTMEKEKEEKETMDISSFFPSARLRDFLHDLYREDVKGQGHGPPMEEQELAWLGIVKDESDGGGEGKRGEMMYFRVHLPIVCARSLFIKEAAARVLVAPSFSPRPSASSSPFSPAPRVIIPLPLRYSARGSEDQEIATSESVSGHLPSLHVVFETVLYYLYTDELPSLHIEAKDSDAVLDMLPFLEALLMIAQEMEISRLFTLVEARLKEMVAVPTCLPLYALARRVKARQLETFLAYFAACHQELLAVHFCSSPLLPSLLKSVEIMMEKEGGYQFVASTDSSEPETESGDFDRQEGREAAEEARLDLHVEALDGERRTNQEGGHVHEAEKEEEEVEKQEMEQSGNETEYGKGPGQAHPRSPPVGASIPTHMGHTATFLHLYPSDSFAASSPCKDSIGTAPFMSPSSLPACPPASPLPLMVVLGVGSRRSCLSFCSLLLYNTRKKRWNRVQASGPLKSIPPSLVGHTTVPLDDPFSRQDPRRRLLVFGGAHYTRSEEDALGLMEPFYLLSIPSLSWARYHPHDEVGKVVVDASLRRVAFHRGLSVAARNRHTMVARHFPRKDDQREQLKTEMWVFGGLSISHRAALQDTLLLSYFEGGRGCSGQEGRFEWSLPEVEGTPPQPRWSHGAVLLPGKEEEGGDRMLILGGVSTEVIFNDLHCARLETISPASFPSSAPSSSSPLSCSRLRRKIVWEKVDVVNGSEQGARYGHTMTLLDRRHIAVLGGVSEIGVNVPISDMLKILVIDSLSLTEGLVCHWKTYPTIYRPLPATAADALPSTLDAPALRRLAIPPPRSQHSVVWCPPEGPKAGGRGHIGPQGRLLVFGGVRDTHDNFAAGKDSDVYELEFLCGHAALWAAEADQRERGGWSLERRSREARFFGREGQAGSETMHIRDFPHVFSPVGGLTEERALQKYQVVIASRPRASIVALPKEPPVFLLPSTLALDLLQLLGFGEGRQWGRDGGRVCDVYRRTVGVTGEEAGSVGEGGREGVLEGREAGQTTAEVVWAHKSFLRRRCPYFQAMLSSGMREASDPIISLGDVSPPVLRALLLYLYTDTLQVTAEIQTVLLPLLLLAHRYGLHPLMQMCSAYVRRALTDRAPCADVLEWSDVFHLVDIKRMCMSVQVMRGWNEGGGKEGSCEGEKEEGLSERLKRQLHEFKRGLSWEKASRGEDVSMLALTTNQMCLCDYVKTMTSGKQN 1638
            MNDWRTDVLCEGKGFHPRQFEYSPHVPDRLVFGTIRGEVVICEGSPNSRSAKACGRRKDVEPHAGRGMQVREGDRRGAKRIVRQLGNSTETHFAKHDYDSILGLSWLKKHPSKLLVGSSAGVIQLCDIEREAWETENAIVLTYEEFDRLTSLHGNCDDTCVLVSGYSHTVQLYDTQTGAIVRRFEGIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRCAGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLKGLPKTGLADNYTRAYYTASGRAILSGSSEEQDVRVHCAQTGDALASFEAYPGRRHHSLYVQSLRGDPLCDHRFSILVNYRDASFPLEIISIDMLGDGHSHTLQAATSALFPFPSPRPLPSIPEGKLDIVPMSSSLAFRGPDGNGGHAELSSCESLSRGREGQKETMDVEQEDTMEKEKEEKETMDISSFFPSARLRDFLHDLYREDVKGQGHGPPMEEQELAWLGIVKDESDGGGEGKRGEMMYFRVHLPIVCARSLFIKEAAARVLVAPSFSPRPSASSSPFSPAPRVIIPLPLRYSARGSEDQEIATSESVSGHLPSLHVVFETVLYYLYTDELPSLHIEAKDSDAVLDMLPFLEALLMIAQEMEISRLFTLVEARLKEMVAVPTCLPLYALARRVKARQLETFLAYFAACHQELLAVHFCSSPLLPSLLKSVEIMMEKEGGYQFVASTDSSEPETESGDFDRQEGREAAEEARLDLHVEALDGERRTNQEGGHVHEAEKEEEEVEKQEMEQSGNETEYGKGPGQAHPRSPPVGASIPTHMGHTATFLHLYPSDSFAASSPCKDSIGTAPFMSPSSLPACPPASPLPLMVVLGVGSRRSCLSFCSLLLYNTRKKRWNRVQASGPLKSIPPSLVGHTTVPLDDPFSRQDPRRRLLVFGGAHYTRSEEDALGLMEPFYLLSIPSLSWARYHPHDEVGKVVVDASLRRVAFHRGLSVAARNRHTMVARHFPRKDDQREQLKTEMWVFGGLSISHRAALQDTLLLSYFEGGRGCSGQEGRFEWSLPEVEGTPPQPRWSHGAVLLPGKEEEGGDRMLILGGVSTEVIFNDLHCARLETISPASFPSSAPSSSSPLSCSRLRRKIVWEKVDVVNGSEQGARYGHTMTLLDRRHIAVLGGVSEIGVNVPISDMLKILVIDSLSLTEGLVCHWKTYPTIYRPLPATAADALPSTLDAPALRRLAIPPPRSQHSVVWCPPEGPKAGGRGHIGPQGRLLVFGGVRDTHDNFAAGKDSDVYELEFLCGHAALWAAEADQRERGGWSLERRSREARFFGREGQAGSETMHIRDFPHVFSPVGGLTEERALQKYQVVIASRPRASIVALPKEPPVFLLPSTLALDLLQLLGFGEGRQWGRDGGRVCDVYRRTVGVTGEEAGSVGEGGREGVLEGREAGQTTAEVVWAHKSFLRRRCPYFQAMLSSGMREASDPIISLGDVSPPVLRALLLYLYTDTLQVTAEIQTVLLPLLLLAHRYGLHPLMQMCSAYVRRALTDRAPCADVLEWSDVFHLVDIKRMCMSVQVMRGWNEGGGKEGSCEGEKEEGLSERLKRQLHEFKRGLSWEKASRGEDVSMLALTTNQMCLCDYVKTMTSGKQN
Sbjct:    1 MNDWRTDVLCEGKGFHPRQFEYSPHVPDRLVFGTIRGEVVICEGSPNSRSAKACGRRKDVEPHAGRGMQVREGDRRGAKRIVRQLGNSTETHFAKHDYDSILGLSWLKKHPSKLLVGSSAGVIQLCDIEREAWETENAIVLTYEEFDRLTSLHGNCDDTCVLVSGYSHTVQLYDTQTGAIVRRFEGIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRCAGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLKGLPKTGLADNYTRAYYTASGRAILSGSSEEQDVRVHCAQTGDALASFEAYPGRRHHSLYVQSLRGDPLCDHRFSILVNYRDASFPLEIISIDMLGDGHSHTLQAATSALFPFPSPRPLPSIPEGKLDIVPMSSSLAFRGPDGNGGHAELSSCESLSRGREGQKETMDVEQEDTMEKEKEEKETMDISSFFPSARLRDFLHDLYREDVKGQGHGPPMEEQELAWLGIVKDESDGGGEGKRGEMMYFRVHLPIVCARSLFIKEAAARVLVAPSFSPRPSASSSPFSPAPRVIIPLPLRYSARGSEDQEIATSESVSGHLPSLHVVFETVLYYLYTDELPSLHIEAKDSDAVLDMLPFLEALLMIAQEMEISRLFTLVEARLKEMVAVPTCLPLYALARRVKARQLETFLAYFAACHQELLAVHFCSSPLLPSLLKSVEIMMEKEGGYQFVASTDSSEPETESGDFDRQEGREAAEEARLDLHVEALDGERRTNQEGGHVHEAEKEEEEVEKQEMEQSGNETEYGKGPGQAHPRSPPVGASIPTHMGHTATFLHLYPSDSFAASSPCKDSIGTAPFMSPSSLPACPPASPLPLMVVLGVGSRRSCLSFCSLLLYNTRKKRWNRVQASGPLKSIPPSLVGHTTVPLDDPFSRQDPRRRLLVFGGAHYTRSEEDALGLMEPFYLLSIPSLSWARYHPHDEVGKVVVDASLRRVAFHRGLSVAARNRHTMVARHFPRKDDQREQLKTEMWVFGGLSISHRAALQDTLLLSYFEGGRGCSGQEGRFEWSLPEVEGTPPQPRWSHGAVLLPGKEEEGGDRMLILGGVSTEVIFNDLHCARLETISPASFPSSAPSSSSPLSCSRLRRKIVWEKVDVVNGSEQGARYGHTMTLLDRRHIAVLGGVSEIGVNVPISDMLKILVIDSLSLTEGLVCHWKTYPTIYRPLPATAADALPSTLDAPALRRLAIPPPRSQHSVVWCPPEGPKAGGRGHIGPQGRLLVFGGVRDTHDNFAAGKDSDVYELEFLCGHAALWAAEADQRERGGWSLERRSREARFFGREGQAGSETMHIRDFPHVFSPVGGLTEERALQKYQVVIASRPRASIVALPKEPPVFLLPSTLALDLLQLLGFGEGRQWGRDGGRVCDVYRRTVGVTGEEAGSVGEGGREGVLEGREAGQTTAEVVWAHKSFLRRRCPYFQAMLSSGMREASDPIISLGDVSPPVLRALLLYLYTDTLQVTAEIQTVLLPLLLLAHRYGLHPLMQMCSAYVRRALTDRAPCADVLEWSDVFHLVDIKRMCMSVQVMRGWNEGGGKEGSCEGEKEEGLSERLKRQLHEFKRGLSWEKASRGEDVSMLALTTNQMCLCDYVKTMTSGKQN 1638          
BLAST of EWM30672.1 vs. NCBI_GenBank
Match: gi|299116722|emb|CBN76281.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 285.804 bits (730), Expect = 4.156e-76
Identity = 138/235 (58.72%), Postives = 179/235 (76.17%), Query Frame = 0
Query:  133 WETENAIVLTYEEFDRLTSLHGNCDDTCVLVSGYSHTVQLYDTQTGAIVRRFEGIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRC-AGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLKGLPKTGLADNYTRAYYTASGRAILSGSSEEQDVRVHCAQTGDALASFEAYPGRRHHSLYVQSLRGDPLCDHRFSILVNYRDASFPLEIISIDML 366
            +  E  IV  +  F++LTS+H N  D  +L SGY++ V+L+D  TG +VR F+ +H DHINISRFANHSP +FA+SSFDK++K WD R  A   P+YT  SE GHVM+ FSP+DV LL S VDN++ Q  A+DGR+ + L  +PKTGL +N+TR+YYT+SGR ILSGSSEEQ VR++CAQTG  + S E YPGR+H SLYVQSLRGDP  D +FS+LVNYRD ++PLEI+++DML
Sbjct:  168 FSEEGRIVTEFSLFEKLTSVHINSTDDQMLASGYTYGVKLFDLSTGQVVRDFKDVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFSPDDVFLLTSAVDNEVKQYLALDGRLHMDLD-VPKTGLDENFTRSYYTSSGRLILSGSSEEQTVRLYCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYRDTAYPLEIVNVDML 401          
BLAST of EWM30672.1 vs. NCBI_GenBank
Match: gi|922418452|ref|XP_013608773.1| (PREDICTED: uncharacterized protein LOC106315547 isoform X2 [Brassica oleracea var. oleracea])

HSP 1 Score: 264.618 bits (675), Expect = 6.812e-71
Identity = 155/365 (42.47%), Postives = 212/365 (58.08%), Query Frame = 0
Query:   11 EGKGFHPRQFEYSPHVPDRLVFGTIRGEVVICEGSPNSRSAKACGRRKDVEPHAGRGMQVREGDRRGAKRIVRQLGNSTETHFAKHDYDSILGLSWLKKHPSKLLVGSSAGVIQLCDIEREAWETENAIV------LTYEEFDRLTSLHGNCDDTCVLVSGYSHTVQLYDTQTGAIVRRFEGIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRCAGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLKGLPKTGLADNYTRAYYTASGRAILSGSSEEQDVRVHCAQTGDAL--ASFEAYPGRRHHSLYVQSLRGDPLCDHRFSILVNYRDASFPLEIISIDMLG 367
            EG+   PRQFEY P  P  +V+GT+ GEVV+     N  S K                            I+R +     +H A+    SILGL WL+ +PS ++ GS+ G ++L DI++ A  T NA        +T+++FD+LTS+H N  D   L SGYS  V LYD  +G  ++ F  +H +HIN+ +F+NHSP +FA+SSFDK +KLWDLR   ++P YTA S +G+VMVCFSP+D +LL S VDN++ QL  VDGR+ L+   +P TG + NYTR+YY      I+SGS +E  VRV CAQTG  L   S E + G     ++VQSLRGDP  D   S+L  Y   S   EI+ ++ML 
Sbjct:  403 EGRSLSPRQFEYHPLDPSLMVYGTLDGEVVVL----NHESGK----------------------------ILRYI----PSHGAQ---SSILGLCWLRTYPSMVIAGSANGSLKLYDIQK-ASSTLNATTHTASGSVTFDDFDQLTSVHVNSTDKLFLASGYSKDVALYDIGSGTRLQVFANMHQEHINVVKFSNHSPSIFATSSFDKDVKLWDLRQDPSQPCYTASSNKGNVMVCFSPDDRYLLTSAVDNEVRQLLTVDGRLHLNFDIVP-TGSSMNYTRSYYMNGNDYIISGSCDESMVRVCCAQTGRRLRDVSLE-WNGSEFSMMFVQSLRGDPFRDFNMSVLATYTRPSSVSEIVKVNMLA 725          
BLAST of EWM30672.1 vs. NCBI_GenBank
Match: gi|923504676|ref|XP_013650558.1| (PREDICTED: uncharacterized protein LOC106355015 isoform X2 [Brassica napus])

HSP 1 Score: 264.233 bits (674), Expect = 8.445e-71
Identity = 154/365 (42.19%), Postives = 208/365 (56.99%), Query Frame = 0
Query:   11 EGKGFHPRQFEYSPHVPDRLVFGTIRGEVVICEGSPNSRSAKACGRRKDVEPHAGRGMQVREGDRRGAKRIVRQLGNSTETHFAKHDYDSILGLSWLKKHPSKLLVGSSAGVIQLCDIEREAWETENAIV------LTYEEFDRLTSLHGNCDDTCVLVSGYSHTVQLYDTQTGAIVRRFEGIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRCAGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLKGLPKTGLADNYTRAYYTASGRAILSGSSEEQDVRVHCAQTGDAL--ASFEAYPGRRHHSLYVQSLRGDPLCDHRFSILVNYRDASFPLEIISIDMLG 367
            EG+   PRQFEY P  P  +V+GT+ GEVV+                     +   G  +R     GA+                    SILGL WLK +PS ++ GS+ G ++L DI++ A  T NA        +T++EFD+LTS+H N  D   L SGYS  V LYD  +G  ++ F  +H +HIN+ +F+NHSP +FA+SSFDK +KLWDLR   ++P YTA S +G+VMVCFSP+D +LLAS VDN++ QL  VDGR+ L+   +P TG + NYTR+YY      I+SGS +E  VRV CAQTG  L   S E   G     ++VQSLRGDP  +   S+L  Y   S   EI+ ++ML 
Sbjct:  403 EGRSLSPRQFEYHPLDPSLMVYGTLDGEVVVL--------------------NHENGKILRYIPSYGAQ-------------------SSILGLCWLKTYPSMVIAGSANGSLKLYDIQK-ASSTLNATTHTASGSVTFDEFDQLTSVHVNSTDKLFLASGYSKDVALYDIGSGTRLQVFASMHQEHINVVKFSNHSPSIFATSSFDKDVKLWDLRQDPSQPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVRQLLTVDGRLHLNFDIVP-TGSSMNYTRSYYMNGNDYIISGSCDESMVRVCCAQTGRRLRDVSLEG-NGSEFSMMFVQSLRGDPFREFNMSVLATYTRPSSVSEIVKVNMLA 725          
BLAST of EWM30672.1 vs. NCBI_GenBank
Match: gi|1109282268|ref|XP_019165474.1| (PREDICTED: uncharacterized protein LOC109161506 isoform X1 [Ipomoea nil])

HSP 1 Score: 265.774 bits (678), Expect = 9.805e-71
Identity = 150/370 (40.54%), Postives = 209/370 (56.49%), Query Frame = 0
Query:   11 EGKGFHPRQFEYSPHVPDRLVFGTIRGEVVICEGSPNSRSAKACGRRKDVEPHAGRGMQVREGDRRGAKRIVRQLGNSTETHFAKHDYDSILGLSWLKKHPSKLLVGSSAGVIQLCDIEREAWET----ENAIVLTYEEFDRLTSLHGNCDDTCVLVSGYSHTVQLYDTQTGAIVRRFEGIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRCAGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLKGLPKTGLADNYTRAYYTASGRAILSGSSEEQDVRVHCAQTGDALASFEAYPGRRHHSLYVQSLRGDPLCDHRFSILVNYRDASFPLEIISIDMLGDGHSHTLQA 376
            E +GF PRQFEY P     +VFGT+ GEVV+     N  S K  G                          +  LG            +S+LGL WLKKHPSK++ GS  G+++L DI+     T    ++A  +T+++FD+LTS+H N  D   L SGYS  V LYD  +G  ++ F+ +H +HIN+ +F+NHSP +FA+SSFD+ +KLWDLR     P YTA S +G+VMVCFSP+D +LL S VDN++ QL AVDGR+ L   G+  TG + NYTR+YY      ++SGS +E  +R+ CAQTG  L            S++VQSLRGDP  D   S L  Y   S   EI+ +++L     + +++
Sbjct:  472 ERRGFRPRQFEYHPSDASLMVFGTLDGEVVVL----NHESEKVIGH-------------------------IPSLGA----------MNSVLGLCWLKKHPSKVIAGSDNGLLRLYDIQCMTMTTTGAYQSASSVTFDDFDQLTSVHANSTDELFLASGYSKHVALYDISSGKRLQVFDDMHQEHINVVKFSNHSPSIFATSSFDQDVKLWDLRQKPIHPCYTASSSRGNVMVCFSPDDHYLLVSAVDNEVKQLLAVDGRLHLDF-GIASTGSSQNYTRSYYMNGRDYVISGSCDEHVIRICCAQTGRRLRDVSLEGKGSGASMFVQSLRGDPFRDFNMSFLAAYTRPSSVSEIVKVNLLASNDQYRVRS 801          
BLAST of EWM30672.1 vs. NCBI_GenBank
Match: gi|727548374|ref|XP_010447107.1| (PREDICTED: uncharacterized protein LOC104729800 [Camelina sativa])

HSP 1 Score: 264.618 bits (675), Expect = 1.505e-70
Identity = 153/357 (42.86%), Postives = 209/357 (58.54%), Query Frame = 0
Query:   17 PRQFEYSPHVPDRLVFGTIRGEVVICEGSPNSRSAKACGRRKDVEPHAGRGMQVREGDRRGAKRIVRQLGNSTETHFAKHDYDSILGLSWLKKHPSKLLVGSSAGVIQLCDIER-EAWETENAIV----LTYEEFDRLTSLHGNCDDTCVLVSGYSHTVQLYDTQTGAIVRRFEGIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRCAGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLKGLPKTGLADNYTRAYYTASGRAILSGSSEEQDVRVHCAQTGDALASFEAYPGRRHHS-LYVQSLRGDPLCDHRFSILVNYRDASFPLEIISIDMLG 367
            PRQFEY P  P  +VFGT+ GEVV+     N  S K                            IVR +     +H ++    SILGL WLK +PS ++ GS+ G ++L DI++  +  T N+      +T++EFD+LTS+H N  D   L SGYS  V LYD  +G  ++ F  +H +HIN+ +F+NH+P LFA+SSFDK +KLWDLR   TRP YTA S +G+VMVCFSP+D +LLAS VDN++ QL  VDGR+ L+ + +P+   + NYTR+YY      I+SGS +E  +RV CAQTG  L        R   S +YVQSLRGDP  D   S+L  Y  +S   EI+ +++L 
Sbjct:  444 PRQFEYHPLDPSLMVFGTLDGEVVVL----NHESGK----------------------------IVRYIS----SHGSQ---SSILGLCWLKIYPSMVIAGSANGSLKLYDIQKASSVVTSNSHFTSGSVTFDEFDQLTSVHANSTDQLFLASGYSKDVALYDIGSGTRLQVFANMHQEHINVVKFSNHTPFLFATSSFDKDVKLWDLRQEPTRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVRQLLTVDGRLHLNFEIVPRVS-SMNYTRSYYMNGNDYIISGSCDENVIRVCCAQTGRRLRDVTLEGNRSEFSMMYVQSLRGDPFRDFNMSVLAAYTRSSSVSEIVKVNLLA 760          
BLAST of EWM30672.1 vs. NCBI_GenBank
Match: gi|922418450|ref|XP_013608765.1| (PREDICTED: uncharacterized protein LOC106315547 isoform X1 [Brassica oleracea var. oleracea])

HSP 1 Score: 263.848 bits (673), Expect = 1.641e-70
Identity = 155/368 (42.12%), Postives = 212/368 (57.61%), Query Frame = 0
Query:   11 EGKGFHPRQFEYSPHVPDRLVFGTIRGEVVICEGSPNSRSAKACGRRKDVEPHAGRGMQVREGDRRGAKRIVRQLGNSTETHFAKHDYDSILGLSWLKKHPSKLLVGSSAGVIQLCDIEREAWETENAIV------LTYEEFDRLTSLHGNCDDTCVLVSGYSHTVQLYDTQTGAIVRRFEGIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRCAGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLKGLPKTGLADNYTRAYYTASGRAILSGSSEEQDVRVHCAQTGDAL--ASFE---AYPGRRHHSLYVQSLRGDPLCDHRFSILVNYRDASFPLEIISIDMLG 367
            EG+   PRQFEY P  P  +V+GT+ GEVV+     N  S K                            I+R +     +H A+    SILGL WL+ +PS ++ GS+ G ++L DI++ A  T NA        +T+++FD+LTS+H N  D   L SGYS  V LYD  +G  ++ F  +H +HIN+ +F+NHSP +FA+SSFDK +KLWDLR   ++P YTA S +G+VMVCFSP+D +LL S VDN++ QL  VDGR+ L+   +P TG + NYTR+YY      I+SGS +E  VRV CAQTG  L   S E    + G     ++VQSLRGDP  D   S+L  Y   S   EI+ ++ML 
Sbjct:  403 EGRSLSPRQFEYHPLDPSLMVYGTLDGEVVVL----NHESGK----------------------------ILRYI----PSHGAQ---SSILGLCWLRTYPSMVIAGSANGSLKLYDIQK-ASSTLNATTHTASGSVTFDDFDQLTSVHVNSTDKLFLASGYSKDVALYDIGSGTRLQVFANMHQEHINVVKFSNHSPSIFATSSFDKDVKLWDLRQDPSQPCYTASSNKGNVMVCFSPDDRYLLTSAVDNEVRQLLTVDGRLHLNFDIVP-TGSSMNYTRSYYMNGNDYIISGSCDESMVRVCCAQTGRRLRDVSLEFGLQWNGSEFSMMFVQSLRGDPFRDFNMSVLATYTRPSSVSEIVKVNMLA 729          
BLAST of EWM30672.1 vs. NCBI_GenBank
Match: gi|976926981|gb|KVI10818.1| (WD40 repeat-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 265.388 bits (677), Expect = 2.193e-70
Identity = 152/361 (42.11%), Postives = 206/361 (57.06%), Query Frame = 0
Query:   11 EGKGFHPRQFEYSPHVPDRLVFGTIRGEVVICEGSPNSRSAKACGRRKDVEPHAGRGMQVREGDRRGAKRIVRQLGNSTETHFAKHDYDSILGLSWLKKHPSKLLVGSSAGVIQLCDIER----EAWETENAIVLTYEEFDRLTSLHGNCDDTCVLVSGYSHTVQLYDTQTGAIVRRFEGIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRCAGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLKGLPKTGLADNYTRAYYTASGRAILSGSSEEQDVRVHCAQTGDALASFEAYPGRRHHSLYVQSLRGDPLCDHRFSILVNYRDASFPLEIISIDMLG 367
            +G+ F PRQFEY P   + +V GT+ GEVV+                                    +++IVR +     +H A    +S+LGL WLKK+PSKL+ GS  G+++L DI+     +A    +A  + ++EFD+LTS+H N  D   L SGYS  V LYD  TG  ++ F  +H +HIN+ +FANHSP +FA+SSFD  +K+WDLR     P YTA S +G+VMVCFSP+D +LL S VDN++ QL AVDGR+ L   G+  TG + NYTR+YY      ILSGS +E  VR+ CAQTG  L            S++VQSLRGDP  D   S+L  Y   S   EI+ ++ML 
Sbjct:  510 DGRKFRPRQFEYHPSNSNLMVIGTLDGEVVVVN--------------------------------HESEKIVRYI----PSHGA---MNSVLGLCWLKKYPSKLISGSDNGLLKLYDIQHISSTDAGIYPSAASVAFDEFDQLTSVHVNSLDELFLASGYSKHVALYDINTGKRLQVFTDMHQEHINVVKFANHSPSMFATSSFDHDVKMWDLRQKPIHPCYTASSSRGNVMVCFSPDDHYLLTSAVDNEVKQLLAVDGRLHLDF-GIAATGSSQNYTRSYYMNGRDYILSGSCDEHVVRICCAQTGRRLRDISLEGKSSGSSMFVQSLRGDPFRDFNLSVLAAYLSPSSSPEIVKVNMLS 830          
BLAST of EWM30672.1 vs. NCBI_GenBank
Match: gi|565450307|ref|XP_006285695.1| (hypothetical protein CARUB_v10007165mg [Capsella rubella] >gi|482554400|gb|EOA18593.1| hypothetical protein CARUB_v10007165mg [Capsella rubella])

HSP 1 Score: 263.848 bits (673), Expect = 2.417e-70
Identity = 161/377 (42.71%), Postives = 219/377 (58.09%), Query Frame = 0
Query:   17 PRQFEYSPHVPDRLVFGTIRGEVVICEGSPNSRSAKACGRRKDVEPHAGRGMQVREGDRRGAKRIVRQLGNSTETHFAKHDYDSILGLSWLKKHPSKLLVGSSAGVIQLCDIER-EAWETENAIV----LTYEEFDRLTSLHGNCDDTCVLVSGYSHTVQLYDTQTGAIVRRFEGIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRCAGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLKGLPKTGLADNYTRAYYTASGRAILSGSSEEQDVRVHCAQTGDAL--ASFEAYPGRRHHSLYVQSLRGDPLCDHRFSILVNYRDASFPLEIISIDMLGDGHSHTLQAATSALFPFPS 386
            PRQFEY P  P  +VFGT+ GEVV+     N  S K                            IVR +     +H ++    SILGL WLK +PS ++ GS+ G ++L DI++  +  T N+ V    +T+++FD+LTS+H N  D   L SGYS  V LYD  +G  ++ F  +H +HIN+ +F+NHSP LFA+SSFDK +KLWDLR   +RP YTA S +G+VMVCFSP+D +LLAS VDN++ QL  VDGR+ L+ + +P+   + NYTR+YY      I+SGS +E  VRV CAQTG  L   + E   G     ++VQSLRGDP  D   S+L  Y  +S   EI+ ++ML  G   T + A   L  FPS
Sbjct:  445 PRQFEYHPLDPSLMVFGTLDGEVVVL----NHESGK----------------------------IVRYI----PSHGSQ---SSILGLCWLKLYPSMVIAGSANGSLKLYDIQKASSVVTTNSHVTSGSVTFDDFDQLTSVHANSTDQLFLASGYSKDVALYDIGSGTRLQVFANMHQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRLEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVRQLLTVDGRLHLNFEIVPRVS-SMNYTRSYYMNGNDYIISGSCDENVVRVCCAQTGRRLRDVTLEG-NGSDFSMMFVQSLRGDPFRDFNMSVLAAYTRSSSVSEIVKVNMLA-GRDSTEEEA-HGLRSFPS 778          
BLAST of EWM30672.1 vs. NCBI_GenBank
Match: gi|1208504279|gb|OWM65665.1| (hypothetical protein CDL15_Pgr017162 [Punica granatum])

HSP 1 Score: 261.536 bits (667), Expect = 2.472e-70
Identity = 151/361 (41.83%), Postives = 202/361 (55.96%), Query Frame = 0
Query:   11 EGKGFHPRQFEYSPHVPDRLVFGTIRGEVVICEGSPNSRSAKACGRRKDVEPHAGRGMQVREGDRRGAKRIVRQLGNSTETHFAKHDYDSILGLSWLKKHPSKLLVGSSAGVIQLCDIEREAWET-----ENAIVLTYEEFDRLTSLHGNCDDTCVLVSGYSHTVQLYDTQTGAIVRRFEGIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRCAGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLKGLPKTGLADNYTRAYYTASGRAILSGSSEEQDVRVHCAQTGDALASFEAYPGRRHHSLYVQSLRGDPLCDHRFSILVNYRDASFPLEIISIDML 366
            E +   PRQFEY P  PD +VFGT+ GE+V+     NS + K         P AG                                 +SILGLSWLKK+PS L+ GS  G ++L DI+ +          N +  T+ +F++LTS+H N  D   L SGYS  + LYD  TG  +  F  +H + IN+++FA HSP +FA+SSFD+ +K+WDLR    RP YTA S +G++M CFSP+D++LL S VDN++ QL AVDGR   + +  P TG + NYTR+YY      I+SGS +EQ VRV CAQTG  L       G   +SLY+QSLRGDP  D   S+L      S  LEI+ I++L
Sbjct:  352 ETRQLRPRQFEYHPSEPDLMVFGTLDGEIVVI----NSENRKIVS----FLPSAGTD-------------------------------NSILGLSWLKKYPSMLIAGSDNGSLKLFDIDSKQPNISDQFHNNYVKATFNDFEQLTSVHVNSTDEQFLASGYSRDLALYDIGTGKRIELFTDLHREPINVAKFAYHSPFMFATSSFDRDVKMWDLRQKMVRPCYTASSSRGNIMACFSPDDLYLLVSAVDNEVKQLLAVDGRPHTNFEIAP-TGSSHNYTRSYYMNGRDYIISGSCDEQVVRVCCAQTGRRLRDVYVEDGESGNSLYIQSLRGDPFRDFHLSVLAASTRLSSKLEIMKINLL 672          
The following BLAST results are available for this feature:
BLAST of EWM30672.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113368|gb|EWM30672.1|0.000e+0100.00conserved uncharacterized protein [Nannochloropsis... [more]
gi|299116722|emb|CBN76281.1|4.156e-7658.72conserved unknown protein [Ectocarpus siliculosus][more]
gi|922418452|ref|XP_013608773.1|6.812e-7142.47PREDICTED: uncharacterized protein LOC106315547 is... [more]
gi|923504676|ref|XP_013650558.1|8.445e-7142.19PREDICTED: uncharacterized protein LOC106355015 is... [more]
gi|1109282268|ref|XP_019165474.1|9.805e-7140.54PREDICTED: uncharacterized protein LOC109161506 is... [more]
gi|727548374|ref|XP_010447107.1|1.505e-7042.86PREDICTED: uncharacterized protein LOC104729800 [C... [more]
gi|922418450|ref|XP_013608765.1|1.641e-7042.12PREDICTED: uncharacterized protein LOC106315547 is... [more]
gi|976926981|gb|KVI10818.1|2.193e-7042.11WD40 repeat-containing protein [Cynara cardunculus... [more]
gi|565450307|ref|XP_006285695.1|2.417e-7042.71hypothetical protein CARUB_v10007165mg [Capsella r... [more]
gi|1208504279|gb|OWM65665.1|2.472e-7041.83hypothetical protein CDL15_Pgr017162 [Punica grana... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna15rna15Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications