EWM29150.1, cds1490 (CDS) Nannochloropsis gaditana

Overview
NameEWM29150.1
Unique Namecds1490
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:765515..771295 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29150.1
Productpoly rna polymerase
Orig transcript idgnl|cribi|Naga_100007g88.6477.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:765515..771295 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016779nucleotidyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR002934Nucleotidyltransferase
Homology
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|585111670|gb|EWM29150.1| (poly rna polymerase [Nannochloropsis gaditana])

HSP 1 Score: 3988.34 bits (10342), Expect = 0.000e+0
Identity = 1926/1926 (100.00%), Postives = 1926/1926 (100.00%), Query Frame = 0
Query:    1 MTHDSTWQQATLLSSLWEWFSELRPDERMQALTIDDPLWIRLYLKLFKHELKSRNKKPGRHLQQQHEQQEQQRGPSSLSASCPSLVGTHSPPKQQQQHPPSCYTVKRDKINYMYGRLLKQQQQQHAAASAGNGSRALAAWGAAGDLDDLEENKGMEEDDDELDFALAAEEEEHSLIEGYRIPWSQQGDVRKRAGRKGERSNSDIDGNDMKREQGSQVTLMCADRLLQRSLRVCTLGATPLDTLTLSQPAVEDAEALYQLLRAVTDGAFLSKPLPTATAKQLSLQSSAVAAISGGGPGLSAAAVASVLSGGTGNTLNSSSPTLASHTGTTALPMVLPEAPWLQECMGEDKETIPLRYLLVSRLELSLWVAYWRRMNRCSVSGPRVPVGLKGVTEQIKHLQEFALKADPAQLAALFEGLRPAQHVLLQQQPLKMTGDKVVRCREGGEHSLDGSGSMRTAQLMMERLLLIPLHWVYQDEGKIVRRVLERIQAACADLVAQELLMEDEARSNMSTDTGSCNQAKKKKKKKQSQQQQRVKEQLRLEKQGVVPRTSLPKVGESTIDRGLGAVMSNGLRLEGTPDVDGHQMEEQLFANRRKIKGEDGVVDEEMRPFSGSSAFRIRRSTDSARKTTGLVTAVVKEDREDQGDLWEEVGRRGTVMKNPSLPPSLTSKTASAHMNSKSGDSSKQVTSKLSDTEVKDTFLQPCYAECGTGRAGGRDSTGPIEACRNVAGDNLVEEIHKVKKENGESADVSAPLRTDGAQAISTNAATILEAAGAASLVAAEDPSNSSHCPATKGCSSALSPSHTPTSPPCVPPRPLYLSSDQPAISDPTSIEPAPAFVHLMVDHAAPTDADPTPSVPSIKVCPNRVSDVTEDEKGKEMQLADRIGTEGKADAGPVDCQENAPPVDADGQTSAGVVEKARAKKKTHNRREYKQRRQMRDAISSILTGLLDKVDQIVSAGQEEMQGDHPAFRKDAFSMSDDTLHQGPLKPKYYRDGQRVDKASMNKATSRAQYAASGIKAQGIQKVPAPKSVQRQRPDQEQEYIDVHQVHCQPLASYVHQQPNGRLKYKAYDHMKGAPCCGSASLPRMCNSQHAQHFPVHGNGRAWGSQGCGGDAGVHMFPSSRLPLYPRIHQYHHNPQYYQEYPRARRGGVELCATSMGANGGQRGQLNDGSDGWKECNDHRVVFQYPLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDGYGTTTGDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRQQDRKQGGTTSSSSPEGTCSISTTTSGKSCISSSSTTSTTTSNSTGCTTGQSSAASSVAGEEEEETDNHSHSQLSDTSSNNTTARTATGSRSPALSSPASSPRFGPAVSSTTSAITSSTTPPRSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDHIIPSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRMAEGHEAGKQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGSGGGVGKRKKSKKGTDGQRQPTNSTSSVPTPKNDVLSLILGY 1926
            MTHDSTWQQATLLSSLWEWFSELRPDERMQALTIDDPLWIRLYLKLFKHELKSRNKKPGRHLQQQHEQQEQQRGPSSLSASCPSLVGTHSPPKQQQQHPPSCYTVKRDKINYMYGRLLKQQQQQHAAASAGNGSRALAAWGAAGDLDDLEENKGMEEDDDELDFALAAEEEEHSLIEGYRIPWSQQGDVRKRAGRKGERSNSDIDGNDMKREQGSQVTLMCADRLLQRSLRVCTLGATPLDTLTLSQPAVEDAEALYQLLRAVTDGAFLSKPLPTATAKQLSLQSSAVAAISGGGPGLSAAAVASVLSGGTGNTLNSSSPTLASHTGTTALPMVLPEAPWLQECMGEDKETIPLRYLLVSRLELSLWVAYWRRMNRCSVSGPRVPVGLKGVTEQIKHLQEFALKADPAQLAALFEGLRPAQHVLLQQQPLKMTGDKVVRCREGGEHSLDGSGSMRTAQLMMERLLLIPLHWVYQDEGKIVRRVLERIQAACADLVAQELLMEDEARSNMSTDTGSCNQAKKKKKKKQSQQQQRVKEQLRLEKQGVVPRTSLPKVGESTIDRGLGAVMSNGLRLEGTPDVDGHQMEEQLFANRRKIKGEDGVVDEEMRPFSGSSAFRIRRSTDSARKTTGLVTAVVKEDREDQGDLWEEVGRRGTVMKNPSLPPSLTSKTASAHMNSKSGDSSKQVTSKLSDTEVKDTFLQPCYAECGTGRAGGRDSTGPIEACRNVAGDNLVEEIHKVKKENGESADVSAPLRTDGAQAISTNAATILEAAGAASLVAAEDPSNSSHCPATKGCSSALSPSHTPTSPPCVPPRPLYLSSDQPAISDPTSIEPAPAFVHLMVDHAAPTDADPTPSVPSIKVCPNRVSDVTEDEKGKEMQLADRIGTEGKADAGPVDCQENAPPVDADGQTSAGVVEKARAKKKTHNRREYKQRRQMRDAISSILTGLLDKVDQIVSAGQEEMQGDHPAFRKDAFSMSDDTLHQGPLKPKYYRDGQRVDKASMNKATSRAQYAASGIKAQGIQKVPAPKSVQRQRPDQEQEYIDVHQVHCQPLASYVHQQPNGRLKYKAYDHMKGAPCCGSASLPRMCNSQHAQHFPVHGNGRAWGSQGCGGDAGVHMFPSSRLPLYPRIHQYHHNPQYYQEYPRARRGGVELCATSMGANGGQRGQLNDGSDGWKECNDHRVVFQYPLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDGYGTTTGDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRQQDRKQGGTTSSSSPEGTCSISTTTSGKSCISSSSTTSTTTSNSTGCTTGQSSAASSVAGEEEEETDNHSHSQLSDTSSNNTTARTATGSRSPALSSPASSPRFGPAVSSTTSAITSSTTPPRSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDHIIPSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRMAEGHEAGKQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGSGGGVGKRKKSKKGTDGQRQPTNSTSSVPTPKNDVLSLILGY
Sbjct:    1 MTHDSTWQQATLLSSLWEWFSELRPDERMQALTIDDPLWIRLYLKLFKHELKSRNKKPGRHLQQQHEQQEQQRGPSSLSASCPSLVGTHSPPKQQQQHPPSCYTVKRDKINYMYGRLLKQQQQQHAAASAGNGSRALAAWGAAGDLDDLEENKGMEEDDDELDFALAAEEEEHSLIEGYRIPWSQQGDVRKRAGRKGERSNSDIDGNDMKREQGSQVTLMCADRLLQRSLRVCTLGATPLDTLTLSQPAVEDAEALYQLLRAVTDGAFLSKPLPTATAKQLSLQSSAVAAISGGGPGLSAAAVASVLSGGTGNTLNSSSPTLASHTGTTALPMVLPEAPWLQECMGEDKETIPLRYLLVSRLELSLWVAYWRRMNRCSVSGPRVPVGLKGVTEQIKHLQEFALKADPAQLAALFEGLRPAQHVLLQQQPLKMTGDKVVRCREGGEHSLDGSGSMRTAQLMMERLLLIPLHWVYQDEGKIVRRVLERIQAACADLVAQELLMEDEARSNMSTDTGSCNQAKKKKKKKQSQQQQRVKEQLRLEKQGVVPRTSLPKVGESTIDRGLGAVMSNGLRLEGTPDVDGHQMEEQLFANRRKIKGEDGVVDEEMRPFSGSSAFRIRRSTDSARKTTGLVTAVVKEDREDQGDLWEEVGRRGTVMKNPSLPPSLTSKTASAHMNSKSGDSSKQVTSKLSDTEVKDTFLQPCYAECGTGRAGGRDSTGPIEACRNVAGDNLVEEIHKVKKENGESADVSAPLRTDGAQAISTNAATILEAAGAASLVAAEDPSNSSHCPATKGCSSALSPSHTPTSPPCVPPRPLYLSSDQPAISDPTSIEPAPAFVHLMVDHAAPTDADPTPSVPSIKVCPNRVSDVTEDEKGKEMQLADRIGTEGKADAGPVDCQENAPPVDADGQTSAGVVEKARAKKKTHNRREYKQRRQMRDAISSILTGLLDKVDQIVSAGQEEMQGDHPAFRKDAFSMSDDTLHQGPLKPKYYRDGQRVDKASMNKATSRAQYAASGIKAQGIQKVPAPKSVQRQRPDQEQEYIDVHQVHCQPLASYVHQQPNGRLKYKAYDHMKGAPCCGSASLPRMCNSQHAQHFPVHGNGRAWGSQGCGGDAGVHMFPSSRLPLYPRIHQYHHNPQYYQEYPRARRGGVELCATSMGANGGQRGQLNDGSDGWKECNDHRVVFQYPLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDGYGTTTGDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRQQDRKQGGTTSSSSPEGTCSISTTTSGKSCISSSSTTSTTTSNSTGCTTGQSSAASSVAGEEEEETDNHSHSQLSDTSSNNTTARTATGSRSPALSSPASSPRFGPAVSSTTSAITSSTTPPRSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDHIIPSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRMAEGHEAGKQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGSGGGVGKRKKSKKGTDGQRQPTNSTSSVPTPKNDVLSLILGY 1926          
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|553196269|ref|XP_005856305.1| (poly rna polymerase, partial [Nannochloropsis gaditana CCMP526] >gi|422292753|gb|EKU20055.1| poly rna polymerase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 3370.1 bits (8737), Expect = 0.000e+0
Identity = 1636/1649 (99.21%), Postives = 1638/1649 (99.33%), Query Frame = 0
Query:  278 AKQLSLQSSAVAAISGGGPGLSAAAVASVLSGGTGNTLNSSSPTLASHTGTTALPMVLPEAPWLQECMGEDKETIPLRYLLVSRLELSLWVAYWRRMNRCSVSGPRVPVGLKGVTEQIKHLQEFALKADPAQLAALFEGLRPAQHVLLQQQPLKMTGDKVVRCREGGEHSLDGSGSMRTAQLMMERLLLIPLHWVYQDEGKIVRRVLERIQAACADLVAQELLMEDEARSNMSTDTGSCNQAKKKKKKKQSQQQQRVKEQLRLEKQGVVPRTSLPKVGESTIDRGLGAVMSNGLRLEGTPDVDGHQMEEQLFANRRKIKGEDGVVDEEMRPFSGSSAFRIRRSTDSARKTTGLVTAVVKEDREDQGDLWEEVGRRGTVMKNPSLPPSLTSKTASAHMNSKSGDSSKQVTSKLSDTEVKDTFLQPCYAECGTGRAGGRDSTGPIEACRNVAGDNLVEEIHKVKKENGESADVSAPLRTDGAQAISTNAATILEAAGAASLVAAEDPSNSSHCPATKGCSSALSPSHTPTSPPCVPPRPLYLSSDQPAISDPTSIEPAPAFVHLMVDHAAPTDADPTPSVPSIKVCPNRVSDVTEDEKGKEMQLADRIGTEGKADAGPVDCQENAPPVDADGQTSAGVVEKARAKKKTHNRREYKQRRQMRDAISSILTGLLDKVDQIVSAGQEEMQGDHPAFRKDAFSMSDDTLHQGPLKPKYYRDGQRVDKASMNKATSRAQYAASGIKAQGIQKVPAPKSVQRQRPDQEQEYIDVHQVHCQPLASYVHQQPNGRLKYKAYDHMKGAPCCGSASLPRMCNSQHAQHFPVHGNGRAWGSQGCGGDAGVHMFPSSRLPLYPRIHQYHHNPQYYQEYPRARRGGVELCATSMGANGGQRGQLNDGSDGWKECNDHRVVFQYPLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDGYGTTTGDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRQQDRKQGGTTSSSSPEGTCSISTTTSGKSCISSSSTTSTTTSNSTGCTTGQSSAASSVAGEEEEETDNHSHSQLSDTSSNNTTARTATGSRSPALSSPASSPRFGPAVSSTTSAITSSTTPPRSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDHIIPSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRMAEGHEAGKQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGSGGGVGKRKKSKKGTDGQRQPTNSTSSVPTPKNDVLSLILGY 1926
            AKQLSLQSSAVAAISGGGPGLSAAAVASVLSGGTGNTLNSSSPTLASHTGTTALPMVLPEAPWLQECMGEDKETIPLRYLLVSRLELSLWVAYWRRMNRCSVSGPRVPVGLKGVTEQIKHLQEFALKADPAQLAALFEGLRPAQHVLLQQQPLKMTGDKVVRCREGGEHSLDGSGSMRTAQLMMERLLLIPLHWVYQDEGKIVRRVLERIQAACADLVAQELLMEDEARSNMSTDTGSCNQAKKKKKKKQSQQQQRVKEQLRLEKQGVVPRTSLPKVGESTIDRGLGAVMSNGLRLEGTPDVDGHQMEEQLFANRR IKGEDGVVDEEMRPFSGSSAFRIRRSTDSARKTTGLVTAVVKEDREDQ DLWEEVGRRGTVMK PSLPPSLTSKTASAHMNSKSGDSSKQVTSK SDTEVKDT LQPCYAECGTGRAGGRDSTGPIEACRNVAGDNLVEEIHKVKKENGESADVSAPLRTDGAQAISTNAATILEAAGAASLVAAEDPSNSSHCPATKGCSSALSPSHTPTSPPCVPPRPLYLSSDQPAISDPTSIEPAPAFVHLMVDHAAPTDADPT SVPSIKVCPNRVSDVTEDEKGKEMQLADRIGTEGKADAGPVDCQENAPPVDADGQTSAGVVEKARAKKKTHNRREYKQRRQMRDAISSILTGLLDKVDQIVSAGQEEMQGDHPAFRKDAFSMSDDTLHQG LKPKYYRDGQRVDKASMNKATSRAQYAASGIKAQGIQKVPAPKSVQRQRPDQEQEYIDVHQVHC+PLASYVHQQPNGRLKYKAYDHMKGAPCCGSASLPRMCNSQHAQHFPVHGNGRAWGSQGCGGDAGVHMFPSSRLPLYPRIHQYHHNPQYYQEYPRARRGGVELCATSMGANGGQRGQLNDGSDGWKECNDHRVVFQYPLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDGYGTTTGDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRQQDRKQGGTTSSSSPEGTCSISTTTSGKSCISSSSTTSTTTSNSTGCTTGQSSAASSVAGEEEEETDNHSHSQLSDTSSNNTTARTATGSRSPALSSPASSPRFGPAVSSTTSAITSSTTPPRSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATT VPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDH I SKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRMAEGHEAGKQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGSGGGVGKRKKS KGT+GQRQPTNSTSSVPTPKNDVLSLILGY
Sbjct:    1 AKQLSLQSSAVAAISGGGPGLSAAAVASVLSGGTGNTLNSSSPTLASHTGTTALPMVLPEAPWLQECMGEDKETIPLRYLLVSRLELSLWVAYWRRMNRCSVSGPRVPVGLKGVTEQIKHLQEFALKADPAQLAALFEGLRPAQHVLLQQQPLKMTGDKVVRCREGGEHSLDGSGSMRTAQLMMERLLLIPLHWVYQDEGKIVRRVLERIQAACADLVAQELLMEDEARSNMSTDTGSCNQAKKKKKKKQSQQQQRVKEQLRLEKQGVVPRTSLPKVGESTIDRGLGAVMSNGLRLEGTPDVDGHQMEEQLFANRR-IKGEDGVVDEEMRPFSGSSAFRIRRSTDSARKTTGLVTAVVKEDREDQDDLWEEVGRRGTVMKKPSLPPSLTSKTASAHMNSKSGDSSKQVTSKHSDTEVKDTLLQPCYAECGTGRAGGRDSTGPIEACRNVAGDNLVEEIHKVKKENGESADVSAPLRTDGAQAISTNAATILEAAGAASLVAAEDPSNSSHCPATKGCSSALSPSHTPTSPPCVPPRPLYLSSDQPAISDPTSIEPAPAFVHLMVDHAAPTDADPTSSVPSIKVCPNRVSDVTEDEKGKEMQLADRIGTEGKADAGPVDCQENAPPVDADGQTSAGVVEKARAKKKTHNRREYKQRRQMRDAISSILTGLLDKVDQIVSAGQEEMQGDHPAFRKDAFSMSDDTLHQGALKPKYYRDGQRVDKASMNKATSRAQYAASGIKAQGIQKVPAPKSVQRQRPDQEQEYIDVHQVHCKPLASYVHQQPNGRLKYKAYDHMKGAPCCGSASLPRMCNSQHAQHFPVHGNGRAWGSQGCGGDAGVHMFPSSRLPLYPRIHQYHHNPQYYQEYPRARRGGVELCATSMGANGGQRGQLNDGSDGWKECNDHRVVFQYPLLQQTPVQGLHNQYRHHRQHLQAQRRLKSKTERSDGYGTTTGDFESVVPPPLVLQQPHELYALDMEAEQARLAYNQGIDAMRSQLSENIADFMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLKPAGTASPALSALSIKTPQMSRQQDRKQGGTTSSSSPEGTCSISTTTSGKSCISSSSTTSTTTSNSTGCTTGQSSAASSVAGEEEEETDNHSHSQLSDTSSNNTTARTATGSRSPALSSPASSPRFGPAVSSTTSAITSSTTPPRSLPPGHSESARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTLVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEKNCGTRTSIRGENCVDHSISSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEVRPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRMAEGHEAGKQESNSHVHRLPAGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPLGEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTALETQGMEMARAMLHKPAVEDDWSHVGSGGGVGKRKKS-KGTNGQRQPTNSTSSVPTPKNDVLSLILGY 1647          
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|298715261|emb|CBJ27910.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 138.658 bits (348), Expect = 8.311e-29
Identity = 71/138 (51.45%), Postives = 91/138 (65.94%), Query Frame = 0
Query: 1495 LYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQ-----------ESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFE 1621
            L +LA  L+ + W+R +K I+TA VPVIKILADP +   GQ             L  GS   ++P+DIS E PQHGGIASS  +RD +  GK Y  A+P  +VLK +L QRGLNQPW GG+SSY+L+ M+ITVLQ+ E
Sbjct: 1512 LQKLANVLQEQTWVRGMKVIETAAVPVIKILADPVSNGNGQFMFDDSRNGRDGWLGGGSGLDYIPLDISFESPQHGGIASSKWVRDCIQGGK-YGFALPAVMVLKEILCQRGLNQPWSGGLSSYSLINMMITVLQRAE 1648          

HSP 2 Score: 69.707 bits (169), Expect = 7.472e-8
Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0
Query: 1278 FMKNRETKMMEHRAARERILEEVRSIIQSLWAGSRVELYGSCFTGLDLISSDLDLVVCGLK 1338
            FM+     M   R A  +++  VR ++  +W  +RVE+YGSCFTGL+L SSD+D+VVCG+ 
Sbjct: 1430 FMQKLGRAMRPRRRAWSQVIARVRELVSGIWKEARVEMYGSCFTGLELPSSDVDVVVCGIN 1490          
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|1173949938|gb|OQR97930.1| (hypothetical protein ACHHYP_09454 [Achlya hypogyna])

HSP 1 Score: 85.1149 bits (209), Expect = 7.513e-13
Identity = 92/384 (23.96%), Postives = 156/384 (40.62%), Query Frame = 0
Query: 1495 LYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQ-HGGIASSLLIRDLVGPGKPYAHAVPLTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQQFERPEEAQANVMAIARSVDCIKRRVLQSHSSSDEK----NCGTRTSIRGENCVDHIIPSKEGKRSQRDDASSNTDANGTMDYGKAVRGALHSLEDEVHKGEEYFEV---RPPPPLVTGGYGSPAEVSYRLWSQFAAAQTSEGRM--AEGHEAGKQESNSHVHRLP------AGFLLTYFLEYYGRIFNPQAEGIAVDQGYGLTFPL---GEFCAARGLPVVADPLTILDPLDRAVNVSRCAFRIGEIQYLFQQCLTAL 1859
            L +LA  L+   W+ SI  +DTA +P++K++                S  + VP+DI+ E    H G+ +  L++ LV          PL +V K LL +RGLN  + GG+SSY+++LM++    Q  R      N   +  S       +  + +  D+K    +    +  + +      +P+K    S + +     +A     Y   V       E E      Y  V    P P  V   + + A  +Y   +   +A+  +  +      +A  +++++     P       G      LE++G IFN Q  G++V  G G  F L   G    A+ L      + I DP+    NVS  +F   ++  LF+    AL
Sbjct:  212 LKRLAAQLQSEKWVESIVMVDTAKIPLLKLV----------------SLDSSVPIDITFESANTHSGLMARDLVKSLVDE---VPELYPLAIVFKQLLRERGLNDVYSGGVSSYSIVLMIVH-FSQLWRAGPTAFNAAMVYASGSLPTEAITIAETPKDDKPAAASSPPSSPAKAQVASPKTVPAKAPPASPKKNLIKVPEAPAVKSYASVV-------ETEPFTTLSYAAVAVGSPTPKPVRSSHPALAPSTYASMAMKESAKEDQLELGSVTSSQADTEDTSADEREDPEPWSVCLGAHAVRMLEFFGVIFNYQKSGMSVRNG-GFIFRLHDEGPSPFAKLL------MVIEDPIHPERNVSAASFAFQKVVALFEDSFMAL 561          
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|1214685040|gb|OWZ02264.1| (hypothetical protein PHMEG_00026204 [Phytophthora megakarya])

HSP 1 Score: 82.0333 bits (201), Expect = 6.984e-12
Identity = 51/132 (38.64%), Postives = 72/132 (54.55%), Query Frame = 0
Query: 1491 SARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVP----LTLVLKALLMQRGLNQPWCGGISSYALMLMVITVLQ 1618
            +A+ L QLA  LE + W+ S+  +DTA VPV+K++                SA T VP+DI+ E        S LL RDL+   K YA  +P    L +V K LL +R LN  + GG+SSY+++LM+I   Q
Sbjct:  190 TAKHLKQLAKVLEKKKWVESLLCLDTAKVPVLKLV----------------SAETSVPIDITFES---AATHSGLLARDLI---KRYADTLPELYPLAIVFKQLLRERDLNDAYTGGLSSYSVVLMIIHFSQ 299          
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|570968820|gb|ETP31939.1| (hypothetical protein F442_19262 [Phytophthora parasitica P10297])

HSP 1 Score: 80.8777 bits (198), Expect = 1.740e-11
Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 0
Query: 1491 SARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVP----LTLVLKALLMQRGLNQPWCGGISSYALMLMVI 1614
            +A+ L QLA  LE + W+ S+  +DTA VPV+K++                SA T VP+DI+ E        S LL RDL+   K YA  +P    L +V K LL +R LN  + GG+SSY+++LM+I
Sbjct:  219 TAKHLRQLAKVLEKKKWVESLLCLDTAKVPVLKLV----------------SAETSVPIDITFES---AATHSGLLARDLI---KRYADNMPELYPLAIVFKQLLRERDLNDAYTGGLSSYSVVLMII 324          
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|567948504|gb|ETK74251.1| (hypothetical protein L915_18910 [Phytophthora parasitica] >gi|568006680|gb|ETL80931.1| hypothetical protein L917_18632 [Phytophthora parasitica])

HSP 1 Score: 80.8777 bits (198), Expect = 1.740e-11
Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 0
Query: 1491 SARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVP----LTLVLKALLMQRGLNQPWCGGISSYALMLMVI 1614
            +A+ L QLA  LE + W+ S+  +DTA VPV+K++                SA T VP+DI+ E        S LL RDL+   K YA  +P    L +V K LL +R LN  + GG+SSY+++LM+I
Sbjct:  219 TAKHLRQLAKVLEKKKWVESLLCLDTAKVPVLKLV----------------SAETSVPIDITFES---AATHSGLLARDLI---KRYADNMPELYPLAIVFKQLLRERDLNDAYTGGLSSYSVVLMII 324          
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|570938513|gb|ETP03770.1| (hypothetical protein F441_19314 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 80.4925 bits (197), Expect = 1.832e-11
Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 0
Query: 1491 SARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVP----LTLVLKALLMQRGLNQPWCGGISSYALMLMVI 1614
            +A+ L QLA  LE + W+ S+  +DTA VPV+K++                SA T VP+DI+ E        S LL RDL+   K YA  +P    L +V K LL +R LN  + GG+SSY+++LM+I
Sbjct:  219 TAKHLRQLAKVLEKKKWVESLLCLDTAKVPVLKLV----------------SAETSVPIDITFES---AATHSGLLARDLI---KRYADNMPELYPLAIVFKQLLRERDLNDAYTGGLSSYSVVLMII 324          
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|567977173|gb|ETL27680.1| (hypothetical protein L916_18808 [Phytophthora parasitica])

HSP 1 Score: 80.4925 bits (197), Expect = 1.832e-11
Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 0
Query: 1491 SARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVP----LTLVLKALLMQRGLNQPWCGGISSYALMLMVI 1614
            +A+ L QLA  LE + W+ S+  +DTA VPV+K++                SA T VP+DI+ E        S LL RDL+   K YA  +P    L +V K LL +R LN  + GG+SSY+++LM+I
Sbjct:  219 TAKHLRQLAKVLEKKKWVESLLCLDTAKVPVLKLV----------------SAETSVPIDITFES---AATHSGLLARDLI---KRYADNMPELYPLAIVFKQLLRERDLNDAYTGGLSSYSVVLMII 324          
BLAST of EWM29150.1 vs. NCBI_GenBank
Match: gi|675177019|ref|XP_008897394.1| (hypothetical protein PPTG_05561 [Phytophthora parasitica INRA-310] >gi|568103218|gb|ETN17889.1| hypothetical protein PPTG_05561 [Phytophthora parasitica INRA-310])

HSP 1 Score: 80.4925 bits (197), Expect = 1.880e-11
Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 0
Query: 1491 SARLLYQLAGALEGRAWIRSIKTIDTAFVPVIKILADPAALSTGQESLAPGSATTWVPVDISLEGPQHGGIASSLLIRDLVGPGKPYAHAVP----LTLVLKALLMQRGLNQPWCGGISSYALMLMVI 1614
            +A+ L QLA  LE + W+ S+  +DTA VPV+K++                SA T VP+DI+ E        S LL RDL+   K YA  +P    L +V K LL +R LN  + GG+SSY+++LM+I
Sbjct:  219 TAKHLRQLAKVLEKKKWVESLLCLDTAKVPVLKLV----------------SAETSVPIDITFES---AATHSGLLARDLI---KRYADNMPELYPLAIVFKQLLRERDLNDAYTGGLSSYSVVLMII 324          
The following BLAST results are available for this feature:
BLAST of EWM29150.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111670|gb|EWM29150.1|0.000e+0100.00poly rna polymerase [Nannochloropsis gaditana][more]
gi|553196269|ref|XP_005856305.1|0.000e+099.21poly rna polymerase, partial [Nannochloropsis gadi... [more]
gi|298715261|emb|CBJ27910.1|8.311e-2951.45conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173949938|gb|OQR97930.1|7.513e-1323.96hypothetical protein ACHHYP_09454 [Achlya hypogyna... [more]
gi|1214685040|gb|OWZ02264.1|6.984e-1238.64hypothetical protein PHMEG_00026204 [Phytophthora ... [more]
gi|570968820|gb|ETP31939.1|1.740e-1139.06hypothetical protein F442_19262 [Phytophthora para... [more]
gi|567948504|gb|ETK74251.1|1.740e-1139.06hypothetical protein L915_18910 [Phytophthora para... [more]
gi|570938513|gb|ETP03770.1|1.832e-1139.06hypothetical protein F441_19314 [Phytophthora para... [more]
gi|567977173|gb|ETL27680.1|1.832e-1139.06hypothetical protein L916_18808 [Phytophthora para... [more]
gi|675177019|ref|XP_008897394.1|1.880e-1139.06hypothetical protein PPTG_05561 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1493rna1493Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications