EWM30478.1, cds149 (CDS) Nannochloropsis gaditana

Overview
NameEWM30478.1
Unique Namecds149
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:384607..386241 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30478.1
Productc transferase
Orig transcript idgnl|cribi|Naga_100013g73.9766.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:384607..386241 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR021067Glycosyltransferase
Homology
BLAST of EWM30478.1 vs. NCBI_GenBank
Match: gi|585113142|gb|EWM30478.1| (c transferase [Nannochloropsis gaditana])

HSP 1 Score: 1138.25 bits (2943), Expect = 0.000e+0
Identity = 544/544 (100.00%), Postives = 544/544 (100.00%), Query Frame = 0
Query:    1 MGSDNNGKRARSKWLLPATALVILLGSLLFFVSESPDHVRGLEGEAVGRDYSARSFTKKALEFASDEAGKLAHNVLPEGILRMGNANEEHEEGPSKPVASIEFIIKRFEEYLQELHMEFDKVVVGDNPVIAAEEVWETFVSLTQKHVLPLDKEYSPPRLDPSGDTTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSNCRTGVQKDLSIGLAPPDVDCVKTFCEGEMGQYCNHLRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMELKKMMTLAERPNPVITNYPPPQGGHWQRSIGLRMCEGYFCEPGIESQIVRLMGSSRYEHEEPPTPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIYVRRNKPKFWETVGRTFKRPGFHNRLNTIAIRRVKNMLEYPEVDDELVWPQSLKVDKESYGMGKVRSFAQYMEMVGLDQKAKTNQRLEWCEAGTIPPVLLRIEEEERLAGKSIVDMRGKQKGKSTAIQRR 544
            MGSDNNGKRARSKWLLPATALVILLGSLLFFVSESPDHVRGLEGEAVGRDYSARSFTKKALEFASDEAGKLAHNVLPEGILRMGNANEEHEEGPSKPVASIEFIIKRFEEYLQELHMEFDKVVVGDNPVIAAEEVWETFVSLTQKHVLPLDKEYSPPRLDPSGDTTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSNCRTGVQKDLSIGLAPPDVDCVKTFCEGEMGQYCNHLRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMELKKMMTLAERPNPVITNYPPPQGGHWQRSIGLRMCEGYFCEPGIESQIVRLMGSSRYEHEEPPTPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIYVRRNKPKFWETVGRTFKRPGFHNRLNTIAIRRVKNMLEYPEVDDELVWPQSLKVDKESYGMGKVRSFAQYMEMVGLDQKAKTNQRLEWCEAGTIPPVLLRIEEEERLAGKSIVDMRGKQKGKSTAIQRR
Sbjct:    1 MGSDNNGKRARSKWLLPATALVILLGSLLFFVSESPDHVRGLEGEAVGRDYSARSFTKKALEFASDEAGKLAHNVLPEGILRMGNANEEHEEGPSKPVASIEFIIKRFEEYLQELHMEFDKVVVGDNPVIAAEEVWETFVSLTQKHVLPLDKEYSPPRLDPSGDTTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSNCRTGVQKDLSIGLAPPDVDCVKTFCEGEMGQYCNHLRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMELKKMMTLAERPNPVITNYPPPQGGHWQRSIGLRMCEGYFCEPGIESQIVRLMGSSRYEHEEPPTPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIYVRRNKPKFWETVGRTFKRPGFHNRLNTIAIRRVKNMLEYPEVDDELVWPQSLKVDKESYGMGKVRSFAQYMEMVGLDQKAKTNQRLEWCEAGTIPPVLLRIEEEERLAGKSIVDMRGKQKGKSTAIQRR 544          
BLAST of EWM30478.1 vs. NCBI_GenBank
Match: gi|553193891|ref|XP_005855853.1| (c transferase [Nannochloropsis gaditana CCMP526] >gi|422293202|gb|EKU20502.1| c transferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 972.615 bits (2513), Expect = 0.000e+0
Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 0
Query:   83 MGNANEEHEEGPSKPVASIEFIIKRFEEYLQELHMEFDKVVVGDNPVIAAEEVWETFVSLTQKHVLPLDKEYSPPRLDPSGDTTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSNCRTGVQKDLSIGLAPPDVDCVKTFCEGEMGQYCNHLRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMELKKMMTLAERPNPVITNYPPPQGGHWQRSIGLRMCEGYFCEPGIESQIVRLMGSSRYEHEEPPTPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIYVRRNKPKFWETVGRTFKRPGFHNRLNTIAIRRVKNMLEYPEVDDELVWPQSLKVDKESYGMGKVRSFAQYMEMVGLDQKAKTNQRLEWCEAGTIPPVLLRIEEEERLAGKSIVDMRGKQKGKSTAIQRR 544
            MGNANEEHEEGPSKPVASIEFIIKRFEEYLQELHMEFDKVVVGDNPVIAAEEVWETFVSLTQKHVLPLDKEYSPPRLDPSGDTTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSNCRTGVQKDLSIGLAPPDVDCVKTFCEGEMGQYCNHLRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMELKKMMTLAERPNPVITNYPPPQGGHWQRSIGLRMCEGYFCEPGIESQIVRLMGSSRYEHEEPPTPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIYVRRNKPKFWETVGRTFKRPGFHNRLNTIAIRRVKNMLEYPEVDDELVWPQSLKVDKESYGMGKVRSFAQYMEMVGLDQKAKTNQRLEWCEAGTIPPVLLRIEEEERLAGKSIVDMRGKQKGKSTAIQRR
Sbjct:    1 MGNANEEHEEGPSKPVASIEFIIKRFEEYLQELHMEFDKVVVGDNPVIAAEEVWETFVSLTQKHVLPLDKEYSPPRLDPSGDTTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSNCRTGVQKDLSIGLAPPDVDCVKTFCEGEMGQYCNHLRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMELKKMMTLAERPNPVITNYPPPQGGHWQRSIGLRMCEGYFCEPGIESQIVRLMGSSRYEHEEPPTPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIYVRRNKPKFWETVGRTFKRPGFHNRLNTIAIRRVKNMLEYPEVDDELVWPQSLKVDKESYGMGKVRSFAQYMEMVGLDQKAKTNQRLEWCEAGTIPPVLLRIEEEERLAGKSIVDMRGKQKGKSTAIQRR 462          
BLAST of EWM30478.1 vs. NCBI_GenBank
Match: gi|1210520121|dbj|GAX21004.1| (hypothetical protein FisN_1Lh328 [Fistulifera solaris])

HSP 1 Score: 377.867 bits (969), Expect = 1.314e-121
Identity = 191/434 (44.01%), Postives = 263/434 (60.60%), Query Frame = 0
Query:   84 GNANEEHEEGPSKPVASIEFIIKRFEEYLQELHMEFDKVVVGDNPVIAAEEVWETFVSLTQKHVLPLDKEY---SPPRLDPSGDTTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSNCRTGVQKDLSIGLAPPDVDCVKTFCEGEMGQYCNHLRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMELKKMMTLAERPNPVITNYPPPQGGHWQRSIGL---RMCEGYFCEPGIESQIVRLMGSSRYEHEEPPTPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIYVRRNKPKFWETVGRTFKRPGFHNRLNTIAIRRVKNMLEYPEVDDELVWPQSLKVDKESYGMGKVRSFAQYMEMVGLDQKAKTNQRLEWCEAGTIPP 511
            G  + + E    KP   +  II+  + ++  LH      V+ ++     E +W+ +  LT K + P D+EY    PPR D    + F+S+ATYRDENC NT+  A+  A  PE L VGLV+QNC+ NC++GV  +L++   PPD DC K FCE ++G+YC+ +R+L INE ESLGP  ARYF SKLW GE +FMQIDAHM FA  WD    +M+     P PV+++YPP       +   L   R+C   F    +ESQI+RL G++ Y+ E+ P P FAP+ AAG+F     F+ +VPFDP+LPW+FMGEEI++SSR +T GY IF P   V+ H+YVRR+KPKFWE+V R F   G HN L  + + RVK  L YPE   +++  +S+    + Y MG  R   +Y+ +VGL+   K      WCE GT PP
Sbjct:  110 GQQSTKSETLIDKPPIELNEIIQYLDSWIHTLHE-----VLLEHKHATFEGIWQAYHDLTVKTLYPWDREYLQRMPPRRD--DGSIFLSVATYRDENCFNTIYNAYGKAKNPEKLFVGLVQQNCHENCKSGVLSNLTMVDVPPDDDCHKLFCESDLGKYCDQIRVLNINEPESLGPYAARYFTSKLWYGEPWFMQIDAHMTFATHWDSISIEMLKACPAPKPVLSHYPPSHTVDLDKRTKLPTSRLCGPVFATSDLESQIIRLEGAAVYDKEKAPLPCFAPFTAAGYFVAHSDFLREVPFDPFLPWIFMGEEIIMSSRLWTAGYDIFGPNQAVVGHMYVRRHKPKFWESVHRMFTN-GVHNPLQAMVLDRVKYQLGYPESARDMLPHKSILTAVDHYTMGTARPLEEYLRLVGLNMTTKEVTYSGWCEEGTPPP 535          
BLAST of EWM30478.1 vs. NCBI_GenBank
Match: gi|1210530562|dbj|GAX10787.1| (hypothetical protein FisN_1Hh328 [Fistulifera solaris])

HSP 1 Score: 375.941 bits (964), Expect = 7.314e-121
Identity = 188/422 (44.55%), Postives = 259/422 (61.37%), Query Frame = 0
Query:   96 KPVASIEFIIKRFEEYLQELHMEFDKVVVGDNPVIAAEEVWETFVSLTQKHVLPLDKEY---SPPRLDPSGDTTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSNCRTGVQKDLSIGLAPPDVDCVKTFCEGEMGQYCNHLRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMELKKMMTLAERPNPVITNYPPPQGGHWQRSIGL---RMCEGYFCEPGIESQIVRLMGSSRYEHEEPPTPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIYVRRNKPKFWETVGRTFKRPGFHNRLNTIAIRRVKNMLEYPEVDDELVWPQSLKVDKESYGMGKVRSFAQYMEMVGLDQKAKTNQRLEWCEAGTIPP 511
            KP   +  II+  + ++  LH      V+ ++     E +W+ +  LT K + P D+EY    PPR D    + F+S+ATYRDENC NT+  A+  A  PE L VGLV+QNC+ NC++GV  +L++   PPD DC K FCE ++G+YC+ +R+L INE ESLGP  ARYF SKLW GE +FMQIDAHM FA  WD    +M+     P PV+++YPP       +   L   R+C   F    +ESQI+RL G++ Y+ ++ P P FAP+ AAG+F     F+ +VPFDP+LPW+FMGEEI++SSR +T GY IF P   V+ H+YVRR+KPKFWE+V R F   G HN L  + + RVK  L YPE   +++  +S+    + Y MG  R   +Y+ +VGL+   K      WCE GT PP
Sbjct:  121 KPPIELNEIIQYLDSWIHTLHE-----VLLEHKHATFEGIWQAYHDLTVKTLYPWDREYLQRMPPRRD--DGSIFLSVATYRDENCFNTIYNAYGKAKNPEKLFVGLVQQNCHENCKSGVLSNLTMVDVPPDDDCQKLFCESDLGKYCDQIRVLNINEPESLGPYAARYFTSKLWYGEPWFMQIDAHMTFATHWDSISIEMLKACPAPKPVLSHYPPSHTVDLDKRTKLPTSRLCGPVFATSDLESQIIRLEGAAVYDKDKAPLPCFAPFTAAGYFVAHSDFLREVPFDPFLPWIFMGEEIIMSSRLWTAGYDIFGPNQAVVGHMYVRRHKPKFWESVHRMFTN-GVHNPLQAMVLDRVKYQLGYPESARDMLPHKSILTAVDHYTMGTARPLEEYLRLVGLNMTTKEVTYTGWCEEGTPPP 534          
BLAST of EWM30478.1 vs. NCBI_GenBank
Match: gi|298715432|emb|CBJ28043.1| ([Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase, family GT60 [Ectocarpus siliculosus])

HSP 1 Score: 357.451 bits (916), Expect = 3.599e-114
Identity = 182/411 (44.28%), Postives = 251/411 (61.07%), Query Frame = 0
Query:  100 SIEFIIKRFEEYLQELHMEFDKVVVGDNPVIAAEEVWETFVSLTQKHVLPLDKEYSPPRLDPSGD--TTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSNCRTGVQKDLSIGLAPPDVDCVKTFCEGEMG-QYCN--HLRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMEL-KKMMTLAERPNPVITNYPPPQGGHWQRSIGLRMCEGYFCEPGIESQIVRLMGSSRYEHEEPPTPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIYVRRNKPKFWETVGRTFKRPGFHNRLNTIAIRRVKNMLEYPEVDDELVWPQSLKVDKESYGMGKVRSFAQYMEMVGLDQKAKTNQRLEWC 504
            S++ I+     +L EL   +  +   +NP    + VW+ + + T + +LP+D+ +    L    D  + F+S+A+YRDENCP TL E +  AD PE L++GLV+QNC S CRTGV +   +    PDV+C + FC  E+G Q+C   ++R   + E E+LGPA+ARY ASKLW GE+YFMQIDAH  F   WD  L   +      P  V+++YPP  G +++   G R+C   F +  +E  I+RL    + + + P  P  AP++ AGFFF    F+ DVPFDPY+PWVFMGEEIL S R +T GY I+SPT NVLSH YVRR+ PKFWETV R FK+P  HN L ++ I RVKN+  YPE   E++   +L  + + YG G VR   +YME VGLD   K  + + WC
Sbjct:  102 SMDTIVYNMRSFLDELDRVYKAI---ENP--DPQNVWDLYKAATDRWLLPMDRAFEGQNLFDVRDDKSIFVSLASYRDENCPTTLKEMYSKADHPELLYIGLVQQNCVSGCRTGVLQGGVVKDMEPDVNCYEEFCSTELGAQFCQSGNVRDFFVQEEEALGPAVARYMASKLWMGETYFMQIDAHSLFVPHWDTTLVNDIHNTPSYPMSVLSHYPPSVGVNFEDKPGYRICGAEFAKSSVEYDIIRLTAGLQQDKQIPVRPCPAPFIGAGFFFAHSSFLADVPFDPYVPWVFMGEEILESLRMWTWGYDIYSPTRNVLSHHYVRRHTPKFWETVNRLFKKPSMHNDLTSMIINRVKNIAGYPESSAEILLRPTLLDNLDLYGDGDVRPMEEYMERVGLDMTTKRAKHISWC 507          
BLAST of EWM30478.1 vs. NCBI_GenBank
Match: gi|219121798|ref|XP_002181246.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407232|gb|EEC47169.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 356.681 bits (914), Expect = 5.840e-113
Identity = 185/425 (43.53%), Postives = 251/425 (59.06%), Query Frame = 0
Query:   96 KPVASIEFIIKRFEEYLQELHMEFDKVVVGDNPVIAAEEVWETFVSLTQKHVLPLDKEY---SPPRLDPSGDTTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSNCRTGVQKDLSIGLAPPDVDCVKTFCEGEMGQ-YC--NHLRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMELKKMMTLAERPNPVITNYPPPQGG---HWQRSIGLRMCEGYFCEPGIESQIVRLMGSSRYEHEEPPTPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIYVRRNKPKFWETVGRTFKRPGFHNRLNTIAIRRVKNMLEYPEVDDELVWPQSLKVDKESYGMGKVRSFAQYMEMVGLDQKAKTNQRLEWCEAGTIPP 511
            KP   ++ +I+  +E++ ELH      V+        E VW+ +  L    + P D+EY    PPR D    + F+S+ATYRDENC NT+  A+  A  P+ L +GLV+QNC+++C++GV  + S+   PPD DC + FC+ E+G   C    +R+L INE ESLGP  ARYFASKLW GE ++MQIDAHM FA  WD     M+  A    P++++YPP       H     G R+C   F    +ESQIVRL G   Y+      P FAP+ AAG+F     F+  VPFDP+LPW+FMGEEI++SSR +T GY IFSP+ +V+ HIYVRR+KPKFWE+V R     G HN L  + + R+K  L YPE   +++  +SL    E YGMG  R   +Y+ +VGL+   K      WCE G  PP
Sbjct:  155 KPPMELQEVIQYLDEWIHELHQ-----VLLSLKHATFEGVWQAYHDLAVSTLYPWDREYLQRMPPRRD--DGSIFLSVATYRDENCYNTVYNAYAKAKNPDQLFIGLVQQNCHADCKSGVLANRSMVAVPPDEDCHQRFCDTELGMPICANQQVRVLNINEPESLGPYAARYFASKLWYGEQWYMQIDAHMTFATHWDQISINMLHKAPSAKPILSHYPPGHTANLDHRSNIAGARLCGPVFATSDLESQIVRLEGGRVYDRTLLEYPAFAPFTAAGYFVAHSDFLRQVPFDPFLPWIFMGEEIIMSSRLWTAGYDIFSPSQSVVGHIYVRRHKPKFWESVHRLLSY-GIHNPLQAMVLERIKFQLGYPEASRDMIVHKSLLTAVEQYGMGNERPLEEYLRLVGLNVTTKEITYTGWCEEGYPPP 571          
BLAST of EWM30478.1 vs. NCBI_GenBank
Match: gi|219122102|ref|XP_002181392.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407378|gb|EEC47315.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 278.1 bits (710), Expect = 1.230e-86
Identity = 134/276 (48.55%), Postives = 187/276 (67.75%), Query Frame = 0
Query:  156 PPRLDPSGDTTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSNCRTGVQKDLSIGLAPPDVDCVKTFCEGEMGQ-YC--NHLRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMELKKMMTLAERPNPVITNYPPPQGGHWQRSI---GLRMCEGYFCEPGIESQIVRLMGSSRYEHEEPPTPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIYVRRNKPKFWE 425
            PPR D    + F+S+ATYRDENC NT+ +A++ A  PE L +GL +QNC+ +C++GV  +LS+   PPD DC + FC+ ++GQ +C  + LR+L I+E ESLGP  ARYF SKLW GE ++MQIDAHM FA  WD     M+  A    P++++YPP       +     G R+C   F    +ESQI+RL G+  Y+ ++   P FAP+ AAG+F     F+ +VPFDP+LPW+FMGEEI++S+R +T GY IFSP+ +V+ H+YVRR+KPKFWE
Sbjct:    2 PPRRD--DGSIFLSVATYRDENCFNTVYKAYEKAKNPEKLFIGLTQQNCHQDCKSGVLSNLSMVEVPPDDDCYQKFCDTDLGQPFCANSQLRVLNIDEPESLGPYAARYFTSKLWYGEQWYMQIDAHMTFANHWDSISVDMLNKAPSSKPILSHYPPSHLVDLDKRTDRAGARLCGPVFATSDLESQIIRLEGAG-YDPQQLEYPAFAPFTAAGYFVAHSNFLREVPFDPFLPWIFMGEEIIMSTRLWTAGYDIFSPSRSVVGHMYVRRHKPKFWE 274          
BLAST of EWM30478.1 vs. NCBI_GenBank
Match: gi|676386809|ref|XP_009036683.1| (hypothetical protein AURANDRAFT_25895, partial [Aureococcus anophagefferens] >gi|323452823|gb|EGB08696.1| hypothetical protein AURANDRAFT_25895, partial [Aureococcus anophagefferens])

HSP 1 Score: 267.7 bits (683), Expect = 6.905e-81
Identity = 149/384 (38.80%), Postives = 210/384 (54.69%), Query Frame = 0
Query:  165 TTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSN------CRTGVQ-KDLSIGLAPPDVDCVKTFCE--GEMGQYCN--HLRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMELKKMMTLAERPNPVITNYPP--PQ-------GGH-WQRSIGLRMCEGYFCEPGIESQIVRLMGSSRYEHEEPP---------------TPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIYVRRNKPKFWETVGRTFKRPGFHNRLNTIAIRRVKNMLEYPE-VDDELVWPQSLKVDKESYGMGKVRSFAQYMEMVGLDQKAKTNQRLEWCEAGTIPP 511
            + F+S++++RDE CP+TL   F  A +P+   VGLV+QNC +       C+T V  +D+ +    PDVDC++ +C      G  C    +R+++ NESE+ GP   RY  S LW GE+Y+MQ+DAH  FA  WD  +K+   LA    P+ ++YPP  PQ       G H W+ ++G  MC+  F     E  IVRL    RY  +E                  PRFAPY+ AGF F + +FV +VPFDPYLP+VFMGEE+  S+RA+T+G+ IF P  +V++H Y+R  KPKFW  + R+    G HN L    + RVK+M+ YPE  D   +   +L    + YG+G  R  A Y +    D   K    + WC  G  PP
Sbjct:    3 SIFVSISSFRDEVCPDTLDNLFATAARPDLAFVGLVQQNCDAGQHAAYGCKTAVMPEDMKVHEMGPDVDCLENYCARPTAYGPACGGGQVRVVKFNESETFGPVFGRYLGSLLWQGETYYMQVDAHTTFARGWDDMIKEDYGLAPAKKPIFSHYPPSGPQKPELPRSGKHAWEGAVGPCMCDASF----AEYNIVRLGAMQRYPIKETSPEGCTVGPRQPDCRKVPRFAPYIGAGFVFASAKFVQEVPFDPYLPFVFMGEELDFSARAWTSGWDIFCPPRSVVAHAYLRPQKPKFWGALQRSIGA-GTHNSLQQFVLPRVKHMVGYPEDADAASLKAATLVGHLDVYGLGTARPIADYAKYADFDFAEKRKSHVAWCIKGDRPP 381          
BLAST of EWM30478.1 vs. NCBI_GenBank
Match: gi|1072224696|gb|OEU09445.1| (hypothetical protein FRACYDRAFT_212158 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 254.988 bits (650), Expect = 9.433e-78
Identity = 128/288 (44.44%), Postives = 181/288 (62.85%), Query Frame = 0
Query:  165 TTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSNCRTGVQKDLSIGLAPPDVDCVKTFCEGEMGQYCNHLRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMELKKMMTLAERPNPVITNYPPPQGGHWQRSI---GLRMCEGYFCEPGIESQIVRLMGSSRYEHEEPPTPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIYVRRNKPKFWETVGRTFKRPGFHNRLNTIAIRRVK 449
            + F+S+A+YRDENC NT+  A++ A  PE L VGLV+QNC+ +C +G +K                +C+   GQ    +RIL I+E ESLGP  ARYFASK+W GE +FMQ DAHM FA+ WD     M+  +    PVI++YPPP      ++      R+C   F    +E+QI+RL G + Y+ +    PRFAP+ AAG+F     F+ +VPFDP+LPW+FMGEEI++S+R +T+GY IFSP+ NV+ H+Y RR+KPKFWE+V        F   ++T+ +R+ K
Sbjct:    9 SIFLSLASYRDENCINTIKWAYEKAKNPERLFVGLVQQNCHKDCMSGGKK----------------YCDN--GQ----VRILNIDEPESLGPYAARYFASKMWFGEQWFMQTDAHMTFAKHWDAISIDMLKRSPAKKPVISHYPPPHTADLDQAATEPAARLCGPMFATSDLENQIIRLEGGNDYDKKHLDVPRFAPFTAAGYFVAHSDFLREVPFDPFLPWIFMGEEIIMSTRLWTSGYDIFSPSQNVVGHMYARRHKPKFWESV-------CFVQFVDTLHVRKKK 267          
BLAST of EWM30478.1 vs. NCBI_GenBank
Match: gi|224000766|ref|XP_002290055.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220973477|gb|EED91807.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 228.024 bits (580), Expect = 8.314e-68
Identity = 118/265 (44.53%), Postives = 160/265 (60.38%), Query Frame = 0
Query:  156 PPRLDPSGDTTFISMATYRDENCPNTLTEAFKHADKPEGLHVGLVEQNCYSNCRTGVQKDLSIGLAPPDVDCVKTFCEGEMGQYCNH--LRILRINESESLGPAMARYFASKLWNGESYFMQIDAHMFFAEKWDMELKKMMTLAERPNPVITNYPPPQGGHW---QRSIGLRMCEGYFCEPGIESQIVRLMGSSRYEHEEPPTPRFAPYVAAGFFFTTGQFVVDVPFDPYLPWVFMGEEILLSSRAFTNGYHIFSPTINVLSHIY 415
            PPR +    + F+S+A+YRDE CP TL EAF  A  PE L VGLV+QNC  N   G                          +YCN+  +R+L++ E+ESLGP MARYFASK+W GE ++MQID+HM FA+ WD    +M+  A    PVI++YPPP         +    R+C   F    +E+QI+RL GS  Y+  +   PRFAP+VAAG+       + +VPFDP+LP++FMGEE +LS+R +T+GY IFSPTI++L H Y
Sbjct:    2 PPRRE--DGSVFLSVASYRDEFCPGTLNEAFSKARNPENLFVGLVQQNCEENSNEG-------------------------KKYCNNGQIRLLKMKETESLGPYMARYFASKMWMGEQWYMQIDSHMTFAQDWDALSIEMLNNAPSDKPVISHYPPPHTADLVEKSKVAAPRLCGPVFATSELEAQIIRLEGSYNYDSVKLSIPRFAPFVAAGYLVAHSDILREVPFDPFLPYIFMGEETILSARLWTSGYDIFSPTISLLGHHY 239          
The following BLAST results are available for this feature:
BLAST of EWM30478.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113142|gb|EWM30478.1|0.000e+0100.00c transferase [Nannochloropsis gaditana][more]
gi|553193891|ref|XP_005855853.1|0.000e+0100.00c transferase [Nannochloropsis gaditana CCMP526] >... [more]
gi|1210520121|dbj|GAX21004.1|1.314e-12144.01hypothetical protein FisN_1Lh328 [Fistulifera sola... [more]
gi|1210530562|dbj|GAX10787.1|7.314e-12144.55hypothetical protein FisN_1Hh328 [Fistulifera sola... [more]
gi|298715432|emb|CBJ28043.1|3.599e-11444.28[Skp1-protein]-hydroxyproline N-acetylglucosaminyl... [more]
gi|219121798|ref|XP_002181246.1|5.840e-11343.53predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|219122102|ref|XP_002181392.1|1.230e-8648.55predicted protein, partial [Phaeodactylum tricornu... [more]
gi|676386809|ref|XP_009036683.1|6.905e-8138.80hypothetical protein AURANDRAFT_25895, partial [Au... [more]
gi|1072224696|gb|OEU09445.1|9.433e-7844.44hypothetical protein FRACYDRAFT_212158 [Fragilario... [more]
gi|224000766|ref|XP_002290055.1|8.314e-6844.53predicted protein, partial [Thalassiosira pseudona... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna149rna149Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications