EWM29171.1, cds1469 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29171.1 vs. NCBI_GenBank
Match: gi|585111691|gb|EWM29171.1| (sec14 cytosolic factor [Nannochloropsis gaditana]) HSP 1 Score: 627.476 bits (1617), Expect = 0.000e+0 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0
Query: 1 MERQRDILECQYNQEKFRERGQQADQQSALVDATQSIDVVPSYVGGRQPLPEELQLMAEFQRVLDSANVILPRNFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE 300
MERQRDILECQYNQEKFRERGQQADQQSALVDATQSIDVVPSYVGGRQPLPEELQLMAEFQRVLDSANVILPRNFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE
Sbjct: 1 MERQRDILECQYNQEKFRERGQQADQQSALVDATQSIDVVPSYVGGRQPLPEELQLMAEFQRVLDSANVILPRNFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE 300
BLAST of EWM29171.1 vs. NCBI_GenBank
Match: gi|585111693|gb|EWM29173.1| (sec14 cytosolic factor [Nannochloropsis gaditana]) HSP 1 Score: 480.33 bits (1235), Expect = 3.718e-170 Identity = 230/249 (92.37%), Postives = 239/249 (95.98%), Query Frame = 0
Query: 54 LQLMAEFQRVLDSANVILPR--NFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE 300
L++ +++ S+ V+L + +FWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE
Sbjct: 7 LKVKHPYRKEFLSSIVLLSQLNSFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE 255
BLAST of EWM29171.1 vs. NCBI_GenBank
Match: gi|585111692|gb|EWM29172.1| (sec14 cytosolic factor [Nannochloropsis gaditana]) HSP 1 Score: 440.269 bits (1131), Expect = 6.957e-155 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
Query: 1 MERQRDILECQYNQEKFRERGQQADQQSALVDATQSIDVVPSYVGGRQPLPEELQLMAEFQRVLDSANVILPRNFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVII 212
MERQRDILECQYNQEKFRERGQQADQQSALVDATQSIDVVPSYVGGRQPLPEELQLMAEFQRVLDSANVILPRNFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKV I
Sbjct: 1 MERQRDILECQYNQEKFRERGQQADQQSALVDATQSIDVVPSYVGGRQPLPEELQLMAEFQRVLDSANVILPRNFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVRI 212
BLAST of EWM29171.1 vs. NCBI_GenBank
Match: gi|551628289|ref|XP_005794125.1| (hypothetical protein EMIHUDRAFT_431773 [Emiliania huxleyi CCMP1516] >gi|485648790|gb|EOD41696.1| hypothetical protein EMIHUDRAFT_431773 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 75.485 bits (184), Expect = 3.264e-12 Identity = 58/206 (28.16%), Postives = 97/206 (47.09%), Query Frame = 0
Query: 81 HESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDA---FFIRHYPCLCLGFEDGSENYSPVVYRRLTHLN-TKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHS 282
H SR L R+L A HV ++ + L D+AWR + R+++ V+G E A F+ H CL PV+ + H+ +++L +T++++ + W E+ R L E Q +I D G + Q + + +L ++ H+PERL II AP +FVW IVS + E+T+ K+ I+ +
Sbjct: 10 HLSRADLL-RWLRARKLHVGKSSDFLQADLAWRRKHRIEERSGEDADAVLGCEVAKLKAFLPHENPPCL-----DRRGRPVIIKHFGHVYFSRLLNSTNITLDQLCDYNWWVNEQYTRRLNE----VGAEQWLIICDAKGFSPTQMDRVALKVLKSMANIDADHYPERLGGFVIINAPASLAFVWK-IVSAWLDEKTKAKVQIISA 204
BLAST of EWM29171.1 vs. NCBI_GenBank
Match: gi|765557877|gb|KJE98137.1| (SEC14-like protein [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 73.9442 bits (180), Expect = 3.925e-11 Identity = 62/216 (28.70%), Postives = 99/216 (45.83%), Query Frame = 0
Query: 86 SLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHY-PCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPE--SFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPS 298
S+ RFL A + V +A L R + WR + + M ++ V +R Y PC G+ ++ PV R+ L+ K + K V+ E +IK ++ E +L E E P I+D G+ + +SI+ ++PE + +L +I AP F W +IV + ERTRNKI+IL G+ +LE+ + PS
Sbjct: 261 SVLLRFLRAREFSVEKAHEMLTRSLYWRQAVGADHILEMYKQPDV-------LRDYLPC---GWHHFDKDGRPVFVFRVGQLDVKGVM-KSVSEEDLIKQLIFINETGMKLASEATERTGRPIHDFTCIVDFEGLGLKHLWRPGVSIIQKIIQQDTANYPETMARLVVIRAPTLFPVAW-SIVRNVFDERTRNKIVIL----GDNFLEQLADILPS 460
BLAST of EWM29171.1 vs. NCBI_GenBank
Match: gi|765557878|gb|KJE98138.1| (SEC14-like protein, variant [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 73.9442 bits (180), Expect = 4.366e-11 Identity = 62/216 (28.70%), Postives = 99/216 (45.83%), Query Frame = 0
Query: 86 SLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHY-PCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPE--SFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPS 298
S+ RFL A + V +A L R + WR + + M ++ V +R Y PC G+ ++ PV R+ L+ K + K V+ E +IK ++ E +L E E P I+D G+ + +SI+ ++PE + +L +I AP F W +IV + ERTRNKI+IL G+ +LE+ + PS
Sbjct: 145 SVLLRFLRAREFSVEKAHEMLTRSLYWRQAVGADHILEMYKQPDV-------LRDYLPC---GWHHFDKDGRPVFVFRVGQLDVKGVM-KSVSEEDLIKQLIFINETGMKLASEATERTGRPIHDFTCIVDFEGLGLKHLWRPGVSIIQKIIQQDTANYPETMARLVVIRAPTLFPVAW-SIVRNVFDERTRNKIVIL----GDNFLEQLADILPS 344
BLAST of EWM29171.1 vs. NCBI_GenBank
Match: gi|470289052|ref|XP_004342753.1| (SEC14-like protein [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 73.9442 bits (180), Expect = 4.585e-11 Identity = 62/216 (28.70%), Postives = 99/216 (45.83%), Query Frame = 0
Query: 86 SLFWRFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHY-PCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPE--SFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPS 298
S+ RFL A + V +A L R + WR + + M ++ V +R Y PC G+ ++ PV R+ L+ K + K V+ E +IK ++ E +L E E P I+D G+ + +SI+ ++PE + +L +I AP F W +IV + ERTRNKI+IL G+ +LE+ + PS
Sbjct: 246 SVLLRFLRAREFSVEKAHEMLTRSLYWRQAVGADHILEMYKQPDV-------LRDYLPC---GWHHFDKDGRPVFVFRVGQLDVKGVM-KSVSEEDLIKQLIFINETGMKLASEATERTGRPIHDFTCIVDFEGLGLKHLWRPGVSIIQKIIQQDTANYPETMARLVVIRAPTLFPVAW-SIVRNVFDERTRNKIVIL----GDNFLEQLADILPS 445
BLAST of EWM29171.1 vs. NCBI_GenBank
Match: gi|676393519|ref|XP_009040037.1| (hypothetical protein AURANDRAFT_66459 [Aureococcus anophagefferens] >gi|323449504|gb|EGB05392.1| hypothetical protein AURANDRAFT_66459 [Aureococcus anophagefferens]) HSP 1 Score: 72.4034 bits (176), Expect = 1.718e-10 Identity = 51/191 (26.70%), Postives = 89/191 (46.60%), Query Frame = 0
Query: 90 RFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVY-RRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMI 279
+F+V G V A + A WR E + + A I+ RHYP + G ++Y R+ H++ L GVT++ +++H + +E +L P+ P V++D+ G+ +QC + ++ +K H+PER ++ I AP+ FS VW +VS ++ T+ KI I
Sbjct: 813 KFIVGTGGDVREASRRWAETSRWRRERDVDAVMGEAHPKFAAIK-----RHYP----HYWCGRGRRGELIYVERVGHVDAAGLKRDGVTIDHLVRHYILLHEFTWSVLAPAPDG-PTSYQCVVLDVDGVQLSQCRGIRFDYVRRCAAIAKEHYPERCSRMVIANAPQWFSVVWK-MVSPLVDPNTKKKIRI 992
BLAST of EWM29171.1 vs. NCBI_GenBank
Match: gi|629102748|gb|KCW68217.1| (hypothetical protein EUGRSUZ_F01871 [Eucalyptus grandis]) HSP 1 Score: 69.3218 bits (168), Expect = 1.176e-9 Identity = 61/256 (23.83%), Postives = 117/256 (45.70%), Query Frame = 0
Query: 52 EELQLMAEFQRVLDSANVILPRNFWEANYHESRCSLFWRFLVANDGHVIRAKNQLARDVAWRDEIR----LKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQL---KVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMILHSIQGNTWLEKWMKMCPSLE 300
EE +++ EF++ L S + PR+ NYH + RFL A + +A++ A + WR + L+D Q R +V +++YP G + ++ P+ RL +N L + T+++ +++ + ++EK F + + I+D+ G+ TK ++ ++PE L +++II A F +WNT+ S + P T +KI +L GN + K +++ + E
Sbjct: 81 EEQKIVDEFRQALISDGFLPPRH---DNYH-----MLLRFLKARKFDIQKARHMWAEMIQWRKDFGTDTILEDFQFRERNEV--------LQYYPQAYHGVD---KDGRPIYIERLGKVNPDKLMQV-TTIDRYVRYHVQEFEKTVAFKFPACSVAAKKHIDSSTTILDVKGVGLKNFTKQARELIMQLQKIDSDYYPETLSRMFIINAAPGFKLLWNTVKSFLDPT-TISKIHVL----GNKYRSKLLEVIDASE 311
BLAST of EWM29171.1 vs. NCBI_GenBank
Match: gi|325190291|emb|CCA24767.1| (SEC14 cytosolic factor putative [Albugo laibachii Nc14]) HSP 1 Score: 69.3218 bits (168), Expect = 1.570e-9 Identity = 57/231 (24.68%), Postives = 112/231 (48.48%), Query Frame = 0
Query: 52 EELQLMAEFQRVLDSANV-ILPRNFWEANYHESRCSLFW-RFLVANDGHVIRAKNQLARDVAWRDEIRLKDLQNMARKDVVGIEDAFFIRHYPCLCLGFEDGSENYSPVVYRRLTHLNTKVLAEKGVTVEKMIKHELWQYEKDCRLLFEHPESFPPRQLKVIIDISGMTWAQCTKDLISILSGFSSFSKVHHPERLQKLYIIGAPKPFSFVWNTIVSRIIPERTRNKIMIL 280
E+L+++ Q V D ++ L +N + + + F RF+ A G+ R K + + ++WR E D+ + R+ E+ + YP F S+ +PV Y + ++ VL + G+++E +I H ++ E L+ + E + ++D+SG+ + +++ + S+F+ H+PER ++II P F+ +W IV +I TR K+ +L
Sbjct: 416 EQLEMVQVDQSVADDSDFQDLTQNSEQTDRSSGKSIPFSPRFIAAEKGNEERGKERYLQTLSWRKE---NDVDQILRRPHRNFEN--IKKCYPQY---FHGRSKAGNPVYYEKPGKIDLLVLKQLGLSIEDLIYHYMYITE----FLWTYIEPDDAARSITVLDVSGIGMSSLGGEVLDFIKRASTFTAAHYPERSAHIFIINIPGWFNMIWR-IVKPLIDPVTREKVHML 633 The following BLAST results are available for this feature:
BLAST of EWM29171.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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