EWM29128.1, cds1462 (CDS) Nannochloropsis gaditana

Overview
NameEWM29128.1
Unique Namecds1462
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:707066..707233 +
Alignment locationCM002457.1:707526..708258 +
Alignment locationCM002457.1:708378..708665 +
Alignment locationCM002457.1:708836..709152 +
Alignment locationCM002457.1:709236..709307 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29128.1
Productfolate biopterin transporter
Orig transcript idgnl|cribi|Naga_100007g116.6455.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:707066..707233 +
CM002457.1supercontigCM002457.1:707526..708258 +
CM002457.1supercontigCM002457.1:708378..708665 +
CM002457.1supercontigCM002457.1:708836..709152 +
CM002457.1supercontigCM002457.1:709236..709307 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
IPR004324FBT
Homology
BLAST of EWM29128.1 vs. NCBI_GenBank
Match: gi|585111648|gb|EWM29128.1| (folate biopterin transporter [Nannochloropsis gaditana])

HSP 1 Score: 1069.69 bits (2765), Expect = 0.000e+0
Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 0
Query:    1 MIGLQHHSSLAPTDAAIILPQGPRLCSEIWSAGQNEQRHIYEEVIDEEDYWTNMGKAHNIGLCLVYALVGFVPSFLSTPLAVYLVRSLNAHPVIQNQVMICTSLPWAFKFFLGFTSDAMPLCGERRRPYILFGVLLWGSSLVCLGLLDTPSAPTLGIGLCISTMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYNETWTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRPSVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLLAVLSVLQLLLIFHINEYLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLIWDVSNSALRRGDLRGLWRLTVLTSCVSPAPLMLLFLLPMDREQENKMRDRAGANKCAGPGITGIKTLRAASAFLIRIALVV 525
            MIGLQHHSSLAPTDAAIILPQGPRLCSEIWSAGQNEQRHIYEEVIDEEDYWTNMGKAHNIGLCLVYALVGFVPSFLSTPLAVYLVRSLNAHPVIQNQVMICTSLPWAFKFFLGFTSDAMPLCGERRRPYILFGVLLWGSSLVCLGLLDTPSAPTLGIGLCISTMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYNETWTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRPSVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLLAVLSVLQLLLIFHINEYLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLIWDVSNSALRRGDLRGLWRLTVLTSCVSPAPLMLLFLLPMDREQENKMRDRAGANKCAGPGITGIKTLRAASAFLIRIALVV
Sbjct:    1 MIGLQHHSSLAPTDAAIILPQGPRLCSEIWSAGQNEQRHIYEEVIDEEDYWTNMGKAHNIGLCLVYALVGFVPSFLSTPLAVYLVRSLNAHPVIQNQVMICTSLPWAFKFFLGFTSDAMPLCGERRRPYILFGVLLWGSSLVCLGLLDTPSAPTLGIGLCISTMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYNETWTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRPSVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLLAVLSVLQLLLIFHINEYLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLIWDVSNSALRRGDLRGLWRLTVLTSCVSPAPLMLLFLLPMDREQENKMRDRAGANKCAGPGITGIKTLRAASAFLIRIALVV 525          
BLAST of EWM29128.1 vs. NCBI_GenBank
Match: gi|298711822|emb|CBJ32848.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 355.91 bits (912), Expect = 2.902e-113
Identity = 170/415 (40.96%), Postives = 271/415 (65.30%), Query Frame = 0
Query:   58 HNIGLCLVYALVGFVPSFLSTPLAVYLVRSLNAHPVIQNQVMICTSLPWAFKFFLGFTSDAMPLCGERRRPYILFGVLLWGSSLVCLGLLDTPSAPTLGIGLCISTMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYNE-TWTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRPSVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLLAVLSVLQLLLIFHINEYLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLIWDVSNSALRRGDLRGLWRLTVLTSCVS 471
            H+  + + Y  VGF+ SF++ PL +Y+V++LNA P  QN +++  ++PW+FK   GF SD  P+ G RR+PY+ FG LL     + L L    +  +L   L ++TMG +M D ++D ++VER+  E E+  G +Q+  Y +RF   V+G + G++++N   W + L+F ++  +  + P+LVL P++ +L +  RS            +   V +Q++ IW+T+ L+ V++PM F++I+N+FQVP++ W ++LQL+L F P MLG ++  G +MT +G+  YK  F   SWR +Y +S  +  + S LQL+LIF +N+ +G+ +F F+LGDDV+T +I G+QFLP+ I+Y+++CP GSEGATY+ LTTF N+AL    SLG+L + +WDV N  LR  D+ GLW+LTVLTS +S
Sbjct:   93 HHAAIPISYFCVGFLGSFVANPLNIYIVQTLNAQPSQQNTLVVLMTVPWSFKLIYGFLSDVCPIRGLRRKPYLAFGYLLSSFCYLVLALTAEVTIQSLSGLLFLATMGQIMGDVMADTLVVERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNRGAWGWGLTFRQVCLIMSMMPVLVLGPAVVYLWE-ERS-----------KETKGVKNQVRDIWDTIQLQAVWRPMAFVYIFNIFQVPHIPWQNYLQLSLHFQPYMLGFMAAAGSVMTCLGVTAYKNCFFHVSWRLIYGWSVVVTTIFSALQLVLIFGLNQRIGLPDFWFALGDDVITQYIQGIQFLPVCIMYLRMCPNGSEGATYAALTTFGNIALNCAGSLGTLFAKLWDVGNDTLRNEDVSGLWKLTVLTSLIS 495          
BLAST of EWM29128.1 vs. NCBI_GenBank
Match: gi|298712589|emb|CBJ33289.1| (Biopterin transport-related protein BT1 [Ectocarpus siliculosus])

HSP 1 Score: 327.02 bits (837), Expect = 2.592e-102
Identity = 183/510 (35.88%), Postives = 294/510 (57.65%), Query Frame = 0
Query:    4 LQHHSSLAPTDAAI-ILPQGPRLCSEIWSAGQNEQRHIYEEVID--------EEDYW-TNMGKAHNIGLCLVYALVGFVPSFLSTPLAVYLVRSLNAHPVIQNQVMICTSLPWAFKFFLGFTSDAMPLCGERRRPYILFGVLLWGSSLVCLGLLDTPSAPTLGIGLCISTMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYN-ETWTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRPSVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLLAVLSVLQLLLIFHINEYLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLIWDVSNSALRRGDLRGLWRLTVLTSCVSPAPLMLLFLLPMDREQENKMRDRAGANKCAG 502
            L H  +    D+   + P    L S++   G +E+R    E+ +        E D W  N+    N  + + Y  VGF   FL+TP++ Y+V  + A P  QN ++    LPW+FK   GF SD  P+ G RR+PY + G L++  + + +   + PS   L +G  I +MG ++ D  +DA++VERS  E  +  G +Q++ Y+VRF  ++LGS +G ++YN + W + LS +++  L  + P+L + P +  L    R    +  G V I+ R  +  Q  +++  +  + V+ PM  IFIYNL QVPN +W SFL + L F+   LG L   G LM  +G+L YK++F  SSWR +Y+++T +++  S  Q+LLI  +N+  GI + +FS+GDD +  F+S +QFLP+  +Y+ +CP G+EG TY++LTT SN++L    +LG+L + IWDVSN A  RGD  G+W+LT+ TS + P PL+L+  LP  + ++  ++     N+  G
Sbjct:   12 LVHGKASKKDDSGSGVQPFEVELLSDV--EGASEKRRPGPEMDEAYGALSTSENDKWMRNIWAVQNRAVVMSYFCVGFAIRFLTTPISYYMVNVIGASPGQQNIMLTLAQLPWSFKLVYGFISDNFPIGGMRRKPYFIMGWLVYVLTNLYVATKEVPSIQLLAVGSLIMSMGFMLSDVTTDAILVERSKHEPAETRGSMQAIGYSVRFVGSLLGSTMGLLLYNKDEWGWGLSIQQLFFLNAIFPVLFMGPWVWSL----RETAVVTDGNVPIEQR--LRQQCTEVFRALEQKAVYGPMGLIFIYNLLQVPNAAWRSFLVIGLSFSNFELGVLGVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQILLILRVNKMFGIGDLVFSVGDDCIADFVSSIQFLPVVQMYIAMCPDGAEGTTYAILTTMSNVSLAAAFTLGTLFTGIWDVSNEAFGRGDFSGMWKLTLFTSLIQPLPLLLIRRLPASQSEQQALQKTGLRNRYGG 513          
BLAST of EWM29128.1 vs. NCBI_GenBank
Match: gi|585105320|gb|EWM24033.1| (folate biopterin transporter [Nannochloropsis gaditana])

HSP 1 Score: 317.005 bits (811), Expect = 1.628e-97
Identity = 180/438 (41.10%), Postives = 258/438 (58.90%), Query Frame = 0
Query:   58 HNIGLCLVYALVGFVPSFLSTPLAVYLVRSLNAHPVIQNQVMICTSLPWAFKFFLGFTSDAMPLCGERRRPYILFGVLLWGSSLVCLGLLDTPSAPTL-GIGLCISTMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYNET-WTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRPSVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLLAVLSVLQLLLIFHINEYLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLIWDVSNSALRRGDLRGLWRLTVLTSCVSPAPLMLLFLLPMDREQENKMRD 493
             N  L + Y  +GF  +F  TPL  Y V  LN  P   N      +LPW+FK   G  SD +P+ G+RR+PY + G   + +  + L  L  PS   L G+G   S  G ++ D + DA+IVERS  E E   GH+QS+ Y  R+   V+G+ LG+++YNE  W + LS   I  L GLA ++++LP    L D ++ L           +  S+  QL  IW+ V  R ++ PM+FI +YN+  +PN +W++FL L L FTP MLG +     + +++GI  Y+ + +  SWR VYI ST L    SVLQL LIF +N   GI + +F+LGDD    FI+ +QFLP   +Y+ LCP G+EG +Y+MLTT SN+A  +G+ LG+L++ IWDVSN+AL  G+  GLW+L++LTS + P  L LLFLLP D   +  M+ 
Sbjct:  135 QNSALLMSYWTIGFAMTFTGTPLTAYAVNKLNVGPAQLNIAGTMLALPWSFKVLYGLLSDCVPIMGKRRKPYFVIGWSAFVAMNLGLASLGEPSLNALIGMGF-FSVCGYMLADVMCDAIIVERSKLEPEGRVGHMQSVGYVARYVGNVVGATLGTILYNEKEWHWGLSISSIYLLNGLAAVVLVLPFTYHLSDPNQVL-----------EARSLKEQLGDIWKMVQRRTIYVPMSFIAVYNMLLIPNAAWSNFLILGLKFTPWMLGIMFIVATVFSWLGITFYRAFLMPYSWRWVYIISTSLTVFFSVLQLSLIFRLNARWGIPDLIFALGDDAAANFITALQFLPAVTMYIGLCPAGAEGTSYAMLTTLSNVAGAIGSDLGTLMTGIWDVSNTALAAGEWTGLWKLSLLTSLLQPLGLCLLFLLPRDVAHQKAMQK 560          
BLAST of EWM29128.1 vs. NCBI_GenBank
Match: gi|1210518133|dbj|GAX23064.1| (hypothetical protein FisN_15Hh036 [Fistulifera solaris])

HSP 1 Score: 311.227 bits (796), Expect = 1.671e-94
Identity = 161/446 (36.10%), Postives = 262/446 (58.74%), Query Frame = 0
Query:   59 NIGLCLVYALVGFVPSFLSTPLAVYLVRSLNAHPVIQNQVMICTSLPWAFKFFLGFTSDAMPLCGERRRPYILFGVLLWGSSLVCLGLLDTPSAPTLGIGLCISTMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYN-ETWTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRP-SVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLLAVLSVLQLLLIFHINEYLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLIWDVSNSALRRGDLRGLWRLTVLTSCVSPAPLMLLFLLPMDREQENKMRDRAGANKCAG 502
            N+ + + Y  +G     L TPL VY +  LNA P   N +    ++PW FK   GF SD +P+ G RR+PY + G +++  S + L +   PS P   + +   T G ++ D ++DA+IVERS  E ++  G +QS  Y VRF  + +G+ +G++VYN + W +SL    I  +    PL+ LLP + +L ++              D  P +   Q ++++ T  LR V+QPMTF+++YN  Q+ N +W +FL   L F+   +G +S  G +M++ GI+ Y+R+F  S+WR VY + T L + +++ QL+L+F +N   GI +  FS+GDDV+  F+  +QFLP+ I+Y+ LCP GSEG TY+MLTT+SNLA  +   + + L+ +WDVS+  +  GD  G+W+L++    + P PL LL L+P ++E + K+++    +   G
Sbjct:  214 NLAIPMSYFCIGVALQLLRTPLIVYFIEDLNATPAEVNVLFTVMAVPWCFKVIYGFLSDCLPISGLRRKPYFMTGWVVFIVSNLILMINPIPSIPVCILLVFTQTAGYMLADVMTDALIVERSRYESQEKRGTMQSKGYIVRFFGSTVGATIGALVYNKDDWDWSLPIRLIFFINAAFPLIFLLPFVPYLLELE------------TDCLPKNFWDQCRELFHTAQLRAVWQPMTFVYVYNALQLTNAAWMNFLVEGLKFSAWQIGLVSIVGSIMSWFGIMTYERFFFASNWRIVYFWCTTLASAIALGQLILVFGVNRQWGIPDIWFSMGDDVLVEFVIAVQFLPMCIMYLGLCPPGSEGTTYAMLTTWSNLAGSLAFDISTALTSVWDVSSETIAAGDYSGIWKLSLFCGLIGPVPLALLGLIPKNKEDQRKLQEDGTRHYFKG 647          
BLAST of EWM29128.1 vs. NCBI_GenBank
Match: gi|1210515426|dbj|GAX25667.1| (hypothetical protein FisN_15Lh036 [Fistulifera solaris])

HSP 1 Score: 310.457 bits (794), Expect = 3.329e-94
Identity = 161/446 (36.10%), Postives = 261/446 (58.52%), Query Frame = 0
Query:   59 NIGLCLVYALVGFVPSFLSTPLAVYLVRSLNAHPVIQNQVMICTSLPWAFKFFLGFTSDAMPLCGERRRPYILFGVLLWGSSLVCLGLLDTPSAPTLGIGLCISTMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYN-ETWTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRP-SVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLLAVLSVLQLLLIFHINEYLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLIWDVSNSALRRGDLRGLWRLTVLTSCVSPAPLMLLFLLPMDREQENKMRDRAGANKCAG 502
            N+ +   Y  +G     L TPL VY +  LNA P   N +    ++PW FK   GF SD +P+ G RR+PY + G +++  S + L +   PS P   + +   T G ++ D ++DA+IVERS  E ++  G +QS  Y VRF  + +G+ +G++VYN + W +SL    I  +    PL+ LLP + +L ++              D  P +   Q ++++ T  LR V+QPMTF+++YN  Q+ N +W +FL   L F+   +G +S  G +M++ GI+ Y+R+F  S+WR VY + T L + +++ QL+L+F +N   GI +  FS+GDDV+  F+  +QFLP+ I+Y+ LCP GSEG TY+MLTT+SNLA  +   + + L+ +WDVS+  +  GD  G+W+L++    + P PL LL L+P ++E + K+++    +   G
Sbjct:  214 NLAIPTSYFCIGVALQLLRTPLIVYFIEDLNATPAEVNVLFTVMAVPWCFKVIYGFLSDCLPISGLRRKPYFMTGWVVFIVSNLILMINPIPSIPVCILLVFTQTAGYMLADVMTDALIVERSRYESQEKRGTMQSKGYIVRFFGSTVGATIGALVYNKDDWDWSLPIRLIFFINAAFPLIFLLPFVPYLLELE------------TDCLPKNFWDQCRELFHTAQLRAVWQPMTFVYVYNALQLTNAAWMNFLVEGLKFSAWQIGLVSIVGSIMSWFGIMTYERFFFASNWRIVYFWCTTLASAIALGQLILVFGVNRQWGIPDIWFSMGDDVLVEFVIAVQFLPMCIMYLGLCPPGSEGTTYAMLTTWSNLAGSLAFDISTALTSVWDVSSETIAAGDYSGIWKLSLFCGLIGPVPLALLGLIPKNKEDQRKLQEDGTRHYFKG 647          
BLAST of EWM29128.1 vs. NCBI_GenBank
Match: gi|299471398|emb|CBN79351.1| (folate/biopterin transporter [Ectocarpus siliculosus])

HSP 1 Score: 289.656 bits (740), Expect = 2.407e-87
Identity = 152/464 (32.76%), Postives = 274/464 (59.05%), Query Frame = 0
Query:   46 DEEDYWTNMGKAHNIGLCLVYALVGFVPSFLSTPLAVYLVRSLNAHPVIQNQVMICTSLPWAFKFFLGFTSDAMPLCGERRRPYILFGVLLWGSSLV---CLGLLDTPSAPTLGIGLCISTMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYN-ETWTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRPSVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLLAVLSVLQLLLIFHINEYLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLI---WDVSNSALRRGDLRGLWRLTVLTSCVSPAPLMLLFLLPMDREQENKMRDRAGANKCAG 502
            DEE    N+    ++ + + Y  +G     L TP+A YL+  L A   +    +I  +LPW+FK   GF SD +P+ G +R+PY+L G   WG  ++    L ++ TP    + I   +S  G ++ D ++DA++VE++ +E   + G++Q+  Y  R+  + +G+V G+V+YN +TW + L+  ++  +  L PL++++P + FL +  +             ++  +     ++W  V    V++PM F+++YN   +PN +W ++L  TLDF+   +G ++   ++  ++G++IYK++    SW S+Y ++T L  V+++ QLLLI  I+   GI + LF+ GD+ ++  I  +QFLPLT +Y  +CP GSEG +Y++LTT SN+A  V  ++G LL+ +   W  SN+ L  GD+ G+WRLT+LTSCV+  P+ L++LLP +++++ +++  +  N+  G
Sbjct:  117 DEE---LNIYSLASLAIVMSYFSIGVALELLYTPIAYYLIDDLGAESGVYTVWVILVTLPWSFKAAYGFLSDCVPIRGLKRKPYMLIG---WGVHILSNSALAIMGTPGEDAVVILSFLSACGYLLSDVMTDAIVVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISELFWINALVPLVLVMPLMPFLLEDKKP-----------REKGVLKRHSDELWTLVQKTAVWRPMIFVYLYNALMLPNGAWTNYLVETLDFSDWDIGVVNICSQICAWLGLVIYKKWMGDVSWPSLYWYTTFLTFVVTIAQLLLILGISASWGIPDLLFASGDEALSEVILALQFLPLTRMYAVMCPTGSEGTSYALLTTVSNVAYAVAYAIGDLLTDLGGSWSTSNATLLAGDMSGMWRLTLLTSCVAVTPMFLVWLLPRNKKEQQELQKSSANNRLGG 563          
BLAST of EWM29128.1 vs. NCBI_GenBank
Match: gi|224002198|ref|XP_002290771.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220974193|gb|EED92523.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 247.669 bits (631), Expect = 1.128e-73
Identity = 151/403 (37.47%), Postives = 218/403 (54.09%), Query Frame = 0
Query:   88 LNAHPVIQNQVMICTSLPWAFKFFLGFTSDAMPLCGERRRPYILFGVLLWG-SSLVCLGLLDTPSAPTLGIGLCISTMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYNETWTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRP--SVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLLAVLSVLQLLLIFHINEYLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLIWDVSNSALRRGDLRGLWRLTVLTSCVSPAPLMLLFLLPMDREQ 487
            LNA    Q  +    SLP  FK   GF SD  PL G RR+ Y+L G   W  +SL  +G    PS P L   L +   G    D + D+++ E++  E E   GHLQS  Y  RF   ++ +   +V+Y+     S   + ++ L    P  ++ P I  LK+                D P  S   Q  +IW TV  R V+QPM F+++YN+ QV N +W  FL+  L FT   L +L     ++ ++GI+ YK++F+  SWRSVY+ +T L  V S LQ+LLI  I    G+S FLF+LGDD    FI G+QFLP TI+ + LCP GSEGA+Y+M TT SN A  +  +  +LL  +WDVS  A+ +G+L G+  LT LT+ +  + ++ + LLP  + +
Sbjct:    2 LNASEAQQATISSLKSLPSTFKLAFGFLSDNFPLGGYRRKSYMLIG---WAVTSLTLIG--APPSIPFLSFSLLLFGTGFWFADVMGDSIVAEKAKLEPETSRGHLQSTCYACRFFGLMIAAPCSTVLYS-----SFGPKSVVVLMAALPACIV-PMIYVLKETK--------------DVPLASTKEQCSEIWNTVCSRAVWQPMGFVYLYNVLQVGNAAWKQFLKTVLGFTSNQLNSLLIVAYVLLWLGIIAYKKFFITWSWRSVYVSTTLLNGVFSALQILLIKGIT--FGLSPFLFALGDDAFADFIGGIQFLPTTIMMVHLCPSGSEGASYAMFTTMSNSAYSLSAAFSTLLLGVWDVSKEAMEKGELSGMINLTALTTIIQVSGVLFVGLLPRTKVE 377          
BLAST of EWM29128.1 vs. NCBI_GenBank
Match: gi|1210513101|dbj|GAX27917.1| (hypothetical protein FisN_21Hh267 [Fistulifera solaris])

HSP 1 Score: 250.751 bits (639), Expect = 1.497e-72
Identity = 163/461 (35.36%), Postives = 238/461 (51.63%), Query Frame = 0
Query:   56 KAHNIGLCLVYALVGFVPSFLSTPLAVYLVRSLNAHPVIQNQVMICTSLPWAFKFFLGFTSDAMPLCGERRRPYILFGVLLWGSSLVCL-------------GLLDTPS-------------APTLG-IGLCI--STMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYNETWTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRPSVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLLAVLSVLQLLLIFHINEYLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLIWDVSNSALRRGDLRGLWRLTVLTSCVSPAPLMLLFLLPMDREQ 487
            +  NI + + Y LVG +   LS+PL       L A P  Q  +    SLP  FK   GF SD +P+ G RR+PY+ FG LL   SL  L             G   T S             AP++G   +C+    MG  + D + D+++ E++  E E   G +QS  Y+ RF   ++ + L +V+Y+    Y +     +    + PL+ +L      +D                  PS  +Q Q+IW TV  R  +QPM F+++YN+ QV N +W  FL  TL FT   L  +     ++ ++GI+ YK +F+  SWR+VYI +T +    S+LQ+LLI  I    GISNF F+LGDD    FISG+QFLP TI+ + LCP GSEGA+Y+M TT +N AL + ++L ++L  IWDVS  AL+ G L+G+  LT LT+      +  +  LP  +E 
Sbjct:   97 RPENIAVPMCYLLVGLLQG-LSSPLVNVFPLDLGATPAQQTSISGIRSLPATFKLLFGFMSDNLPIMGYRRKPYMFFGWLLASFSLFILMVNSNLSIESRGAGCFKTDSEFIEDGSDRIPEDAPSIGFFSICLFGFGMGFWVADVMGDSIVAEKAKLEPESSRGSIQSSCYSYRFFGMMVAAPLSTVLYSYAGPYYVILLLSLLPLCILPLVYML-----YEDTETP-------------PPSTRNQCQEIWNTVCSRAAWQPMAFVYVYNVMQVGNAAWREFLVSTLHFTTCQLNMILIVTLVLLYLGIICYKYFFITWSWRNVYIVTTLMNGFFSLLQILLIKGIT--FGISNFFFALGDDAFAEFISGIQFLPTTIMMVHLCPSGSEGASYAMFTTVNNSALTLSSALSTVLLRIWDVSKKALQEGRLQGMINLTYLTTAFQVGAIAFVGFLPHYKED 536          
BLAST of EWM29128.1 vs. NCBI_GenBank
Match: gi|1210516465|dbj|GAX24632.1| (hypothetical protein FisN_21Lh267 [Fistulifera solaris])

HSP 1 Score: 250.366 bits (638), Expect = 2.140e-72
Identity = 163/461 (35.36%), Postives = 238/461 (51.63%), Query Frame = 0
Query:   56 KAHNIGLCLVYALVGFVPSFLSTPLAVYLVRSLNAHPVIQNQVMICTSLPWAFKFFLGFTSDAMPLCGERRRPYILFG---------VLLWGSSLV-------CLGL-------------LDTPSAPTLGIGLCISTMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYNETWTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRPSVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLLAVLSVLQLLLIFHINEYLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLIWDVSNSALRRGDLRGLWRLTVLTSCVSPAPLMLLFLLPMDREQ 487
            +  NI + + Y LVG +   LS+PL       L A P  Q  +    SLP  FK   GF SD +P+ G RR+PY+ FG          L+  S+L        C                 D PS     I L    MG  + D + D+++ E++  E E   G +QS  Y+ RF   ++ + L +V+Y+    Y      ++ L  + PL + LP +  L +  ++              PS  +Q Q+IW TV  R  +QPM F++IYN+ QV N +W  FL  TL FT   L  +     ++ ++GI+ YK +F+  SWR+VYI +T +    S+LQ+LLI  I    GISNF F+LGDD    FISG+QFLP TI+ + LCP GSEGA+Y+M TT +N AL + ++L ++L  IWDVS +AL+ G L+G+  LT LT+      +  +  LP  +E 
Sbjct:   97 RPENIAVPMCYLLVGLLQG-LSSPLVNVFPLDLGATPAQQTSISGIRSLPATFKLLFGFMSDNLPIMGYRRKPYMFFGWLLASLSLFFLMANSNLSIESRGAGCFKADSEIIEEDSDRIPEDAPSIGFFSICLFGFGMGFWVADVMGDSIVAEKAKLEPESSRGSIQSSCYSYRFFGMMMAAPLSTVLYSYAGPY-----YVILLLSILPLCI-LPLVYLLYEDTKT------------PPPSTRNQCQEIWNTVCSRAAWQPMAFVYIYNVMQVGNAAWREFLVSTLHFTTCQLNMILIVTLVLLYLGIICYKYFFITWSWRNVYIVTTLMNGFFSLLQILLIKGIT--FGISNFFFALGDDAFAEFISGIQFLPTTIMMVNLCPSGSEGASYAMFTTVNNSALTLSSALSTVLLRIWDVSKNALQDGRLQGMINLTYLTTASQVGAIAFVGFLPHYKED 536          
The following BLAST results are available for this feature:
BLAST of EWM29128.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111648|gb|EWM29128.1|0.000e+0100.00folate biopterin transporter [Nannochloropsis gadi... [more]
gi|298711822|emb|CBJ32848.1|2.902e-11340.96conserved unknown protein [Ectocarpus siliculosus][more]
gi|298712589|emb|CBJ33289.1|2.592e-10235.88Biopterin transport-related protein BT1 [Ectocarpu... [more]
gi|585105320|gb|EWM24033.1|1.628e-9741.10folate biopterin transporter [Nannochloropsis gadi... [more]
gi|1210518133|dbj|GAX23064.1|1.671e-9436.10hypothetical protein FisN_15Hh036 [Fistulifera sol... [more]
gi|1210515426|dbj|GAX25667.1|3.329e-9436.10hypothetical protein FisN_15Lh036 [Fistulifera sol... [more]
gi|299471398|emb|CBN79351.1|2.407e-8732.76folate/biopterin transporter [Ectocarpus siliculos... [more]
gi|224002198|ref|XP_002290771.1|1.128e-7337.47predicted protein, partial [Thalassiosira pseudona... [more]
gi|1210513101|dbj|GAX27917.1|1.497e-7235.36hypothetical protein FisN_21Hh267 [Fistulifera sol... [more]
gi|1210516465|dbj|GAX24632.1|2.140e-7235.36hypothetical protein FisN_21Lh267 [Fistulifera sol... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1465rna1465Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications