EWM29130.1, cds1458 (CDS) Nannochloropsis gaditana

Overview
NameEWM29130.1
Unique Namecds1458
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:697047..697493 +
Alignment locationCM002457.1:697769..698026 +
Alignment locationCM002457.1:698162..698890 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29130.1
Producttubulin gamma-1 chain
Orig transcript idgnl|cribi|Naga_100007g120.6457.mrna
GeneTUG
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:697047..697493 +
CM002457.1supercontigCM002457.1:697769..698026 +
CM002457.1supercontigCM002457.1:698162..698890 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0051258protein polymerization
GO:0007020microtubule nucleation
GO:0031122cytoplasmic microtubule organization
GO:0007017microtubule-based process
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO:0000930gamma-tubulin complex
GO:0005874microtubule
Vocabulary: INTERPRO
TermDefinition
IPR008280Tub_FtsZ_C
IPR017975Tubulin_CS
IPR023123Tubulin_C
IPR003008Tubulin_FtsZ_GTPase
IPR018316Tubulin/FtsZ_2-layer-sand-dom
IPR002454Gamma_tubulin
IPR000217Tubulin
Homology
BLAST of EWM29130.1 vs. NCBI_GenBank
Match: gi|585111650|gb|EWM29130.1| (tubulin gamma-1 chain [Nannochloropsis gaditana])

HSP 1 Score: 1001.89 bits (2589), Expect = 0.000e+0
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 0
Query:    1 MPHEIITLQVGQCGNQIGSEFWKQICAEHGISPDGMLQDFATEGNDRKDVFFYQADDDHYIPRALLMDLEPRVINSILNSEYRSLYNQENVFMASNGGGAGNNWASGHRQAEEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPNWDQTQSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLRITNPTVNQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISDVQASAVRKTTVLDVMRRLTQTKNIMVSASTRTGCYISILNIIQGDVDPSQVHKALQRIRERKLVNFIPWGPASIQVALSRKSAYVETAHKVSGLMLANHTCMASLFQRSVNQYDKIRKRNAFVENYRKEPMFQDSLDEFDSSREVVQGLIDEYKAAERPDYITWAHGGDIGYAANLPSSASEPQSQSFQYDHYQRN 477
            MPHEIITLQVGQCGNQIGSEFWKQICAEHGISPDGMLQDFATEGNDRKDVFFYQADDDHYIPRALLMDLEPRVINSILNSEYRSLYNQENVFMASNGGGAGNNWASGHRQAEEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPNWDQTQSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLRITNPTVNQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISDVQASAVRKTTVLDVMRRLTQTKNIMVSASTRTGCYISILNIIQGDVDPSQVHKALQRIRERKLVNFIPWGPASIQVALSRKSAYVETAHKVSGLMLANHTCMASLFQRSVNQYDKIRKRNAFVENYRKEPMFQDSLDEFDSSREVVQGLIDEYKAAERPDYITWAHGGDIGYAANLPSSASEPQSQSFQYDHYQRN
Sbjct:    1 MPHEIITLQVGQCGNQIGSEFWKQICAEHGISPDGMLQDFATEGNDRKDVFFYQADDDHYIPRALLMDLEPRVINSILNSEYRSLYNQENVFMASNGGGAGNNWASGHRQAEEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPNWDQTQSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLRITNPTVNQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISDVQASAVRKTTVLDVMRRLTQTKNIMVSASTRTGCYISILNIIQGDVDPSQVHKALQRIRERKLVNFIPWGPASIQVALSRKSAYVETAHKVSGLMLANHTCMASLFQRSVNQYDKIRKRNAFVENYRKEPMFQDSLDEFDSSREVVQGLIDEYKAAERPDYITWAHGGDIGYAANLPSSASEPQSQSFQYDHYQRN 477          
BLAST of EWM29130.1 vs. NCBI_GenBank
Match: gi|298706731|emb|CBJ29680.1| (gamma tubulin [Ectocarpus siliculosus])

HSP 1 Score: 811.216 bits (2094), Expect = 0.000e+0
Identity = 383/446 (85.87%), Postives = 412/446 (92.38%), Query Frame = 0
Query:    1 MPHEIITLQVGQCGNQIGSEFWKQICAEHGISPDGMLQDFATEGNDRKDVFFYQADDDHYIPRALLMDLEPRVINSILNSEYRSLYNQENVFMASNGGGAGNNWASGHRQAEEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPNWDQTQSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLRITNPTVNQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISDVQASAVRKTTVLDVMRRLTQTKNIMVSASTRTGCYISILNIIQGDVDPSQVHKALQRIRERKLVNFIPWGPASIQVALSRKSAYVETAHKVSGLMLANHTCMASLFQRSVNQYDKIRKRNAFVENYRKEPMFQDSLDEFDSSREVVQGLIDEYKAAERPDYITWA 446
            MP EIITLQVGQCGNQIGSEFWKQ+CAEHGISPDG LQ+FA+ G+DRKDVFFYQADDDHYIPRALL+DLEPRVIN I +  YR L+N ENVF++  GGGAGNNWASG+RQAEE HD LM+MIDREADGSDSLEGFVL HSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPN  Q+QSDVVVQPYNS+LTLKRLTLNAD VVVLDNTALNRIAVDRLRI NPTV QLNS+VSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISD Q SAVR+TTVLDVMRRLTQTKNIMVSAST+ GCY+SILNIIQG+VDP+QVHKALQRIRERKLV+FIPWGPASIQVALSRKS YVETAHKVSGLMLANHTCM+ LF RS+ Q+D+IRKRNAFV+NYRKEPMF D+LDEF+ SREVV  LI+EYKA E P+YI W 
Sbjct:   99 MPREIITLQVGQCGNQIGSEFWKQLCAEHGISPDGTLQEFASHGDDRKDVFFYQADDDHYIPRALLLDLEPRVINMIQSEGYRDLFNPENVFVSKEGGGAGNNWASGYRQAEEQHDYLMDMIDREADGSDSLEGFVLSHSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPNATQSQSDVVVQPYNSILTLKRLTLNADAVVVLDNTALNRIAVDRLRIPNPTVGQLNSIVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISDTQTSAVRRTTVLDVMRRLTQTKNIMVSASTKKGCYVSILNIIQGEVDPTQVHKALQRIRERKLVSFIPWGPASIQVALSRKSPYVETAHKVSGLMLANHTCMSQLFTRSLQQFDRIRKRNAFVDNYRKEPMFADNLDEFEDSREVVASLIEEYKACESPNYINWG 544          
BLAST of EWM29130.1 vs. NCBI_GenBank
Match: gi|698797614|ref|XP_009831836.1| (tubulin gamma chain [Aphanomyces astaci] >gi|574113627|gb|ETV79117.1| tubulin gamma chain [Aphanomyces astaci])

HSP 1 Score: 798.89 bits (2062), Expect = 0.000e+0
Identity = 376/447 (84.12%), Postives = 408/447 (91.28%), Query Frame = 0
Query:    1 MPHEIITLQVGQCGNQIGSEFWKQICAEHGISPDGMLQDFATEGNDRKDVFFYQADDDHYIPRALLMDLEPRVINSILNSEYRSLYNQENVFMASNGGGAGNNWASGHRQAEEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPNWDQTQSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLRITNPTVNQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISDVQASAVRKTTVLDVMRRLTQTKNIMVSASTRTGCYISILNIIQGDVDPSQVHKALQRIRERKLVNFIPWGPASIQVALSRKSAYVETAHKVSGLMLANHTCMASLFQRSVNQYDKIRKRNAFVENYRKEPMFQDSLDEFDSSREVVQGLIDEYKAAERPDYITWAH 447
            MP EIITLQVGQCGNQIGSEFWKQ+C EHGISPDG++QD+AT+GNDRKDVFFYQADD+HYIPRALLMDLEPRVINSI+NS YR+LYN EN F+A +GGGAGNNWASG+ Q E+HHD LMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLE LNDHFPKKLIQTYSVFPN D  QSDVVVQPYNSLLTLKRL LN+DCVVVLDNTALNRIAVDRLRI NPTV+QLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPL I D Q SAVRKTTVLDVMRRL Q KNIMVS ST+TGCYISILNIIQGDVDP+QVHK+LQRIRERKLV FIPWGPASIQVALSRKS YVE+ HKV+GLMLANHT +A+LF RSV  YD++RK NAF++ YRK+PMF D L+EFD++REVV  +I+EYKA+ER DY TW  
Sbjct:    1 MPREIITLQVGQCGNQIGSEFWKQLCVEHGISPDGIVQDYATQGNDRKDVFFYQADDEHYIPRALLMDLEPRVINSIMNSSYRNLYNPENTFIAKDGGGAGNNWASGYNQGEQHHDLLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLENLNDHFPKKLIQTYSVFPNQDDFQSDVVVQPYNSLLTLKRLVLNSDCVVVLDNTALNRIAVDRLRIDNPTVSQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLTI-DAQVSAVRKTTVLDVMRRLLQPKNIMVSTSTKTGCYISILNIIQGDVDPTQVHKSLQRIRERKLVKFIPWGPASIQVALSRKSPYVESPHKVNGLMLANHTSIANLFHRSVVHYDRLRKHNAFIDQYRKQPMFADGLEEFDNAREVVTSMIEEYKASERADYATWGQ 446          
BLAST of EWM29130.1 vs. NCBI_GenBank
Match: gi|673035578|ref|XP_008871750.1| (tubulin gamma chain [Aphanomyces invadans] >gi|574472189|gb|ETV99194.1| tubulin gamma chain [Aphanomyces invadans])

HSP 1 Score: 798.505 bits (2061), Expect = 0.000e+0
Identity = 375/447 (83.89%), Postives = 408/447 (91.28%), Query Frame = 0
Query:    1 MPHEIITLQVGQCGNQIGSEFWKQICAEHGISPDGMLQDFATEGNDRKDVFFYQADDDHYIPRALLMDLEPRVINSILNSEYRSLYNQENVFMASNGGGAGNNWASGHRQAEEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPNWDQTQSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLRITNPTVNQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISDVQASAVRKTTVLDVMRRLTQTKNIMVSASTRTGCYISILNIIQGDVDPSQVHKALQRIRERKLVNFIPWGPASIQVALSRKSAYVETAHKVSGLMLANHTCMASLFQRSVNQYDKIRKRNAFVENYRKEPMFQDSLDEFDSSREVVQGLIDEYKAAERPDYITWAH 447
            MP EIITLQVGQCGNQIGSEFWKQ+C EHGISPDG++QD+AT+GNDRKDVFFYQADD+HYIPRALLMDLEPRVINSI+NS YR+LYN EN F+A +GGGAGNNWASG+ Q E+HHD LMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLE LNDHFPKKLIQTYSVFPN D  QSDVVVQPYNSLLTLKRL LN+DCVVVLDNTALNRIAVDRLRI NPTV+QLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPL I D Q SAVRKTTVLDVMRRL Q KNIMVS ST+TGCY+SILNIIQGDVDP+QVHK+LQRIRERKLV FIPWGPASIQVALSRKS YVE+AHKV+GLMLANHT + +LF RSV  YD++RK NAF++ YRK+PMF D L+EFD++REVV  +I+EYKA+ER DY TW  
Sbjct:    1 MPREIITLQVGQCGNQIGSEFWKQLCVEHGISPDGIVQDYATQGNDRKDVFFYQADDEHYIPRALLMDLEPRVINSIMNSSYRNLYNPENTFIAKDGGGAGNNWASGYNQGEQHHDLLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLENLNDHFPKKLIQTYSVFPNQDDFQSDVVVQPYNSLLTLKRLVLNSDCVVVLDNTALNRIAVDRLRIDNPTVSQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLTI-DAQVSAVRKTTVLDVMRRLLQPKNIMVSTSTKTGCYVSILNIIQGDVDPTQVHKSLQRIRERKLVKFIPWGPASIQVALSRKSPYVESAHKVNGLMLANHTSIGNLFHRSVVHYDRLRKHNAFIDQYRKQPMFADGLEEFDNAREVVTSMIEEYKASERADYATWGQ 446          
BLAST of EWM29130.1 vs. NCBI_GenBank
Match: gi|1173928458|gb|OQR82043.1| (tubulin gamma chain [Thraustotheca clavata])

HSP 1 Score: 793.497 bits (2048), Expect = 0.000e+0
Identity = 376/446 (84.30%), Postives = 403/446 (90.36%), Query Frame = 0
Query:    1 MPHEIITLQVGQCGNQIGSEFWKQICAEHGISPDGMLQDFATEGNDRKDVFFYQADDDHYIPRALLMDLEPRVINSILNSEYRSLYNQENVFMASNGGGAGNNWASGHRQAEEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPNWDQTQSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLRITNPTVNQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISDVQASAVRKTTVLDVMRRLTQTKNIMVSASTRTGCYISILNIIQGDVDPSQVHKALQRIRERKLVNFIPWGPASIQVALSRKSAYVETAHKVSGLMLANHTCMASLFQRSVNQYDKIRKRNAFVENYRKEPMFQDSLDEFDSSREVVQGLIDEYKAAERPDYITWA 446
            MP EIITLQVGQCGNQIGSEFWKQ+C EHGIS DG++QDFAT GNDRKDVFFYQADD+HYIPRALL+DLEPRVINSI+NS YR+LYN EN F+A +GGGAGNNWASG+ Q E HHD LMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLE LNDHFPKKLIQTYSVFPN D  QSDVVVQPYNSLLTLKRL LNADCVVVLDNTALNRIAVDRLRI NPTV+QLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPL I D Q SAVRKTTVLDVMRRL Q KNIMVS ST+ GCYISILNIIQGDVDP+QVHK+LQRIRERKL  FIPWGPASIQVALSRKS YVE+AHKV+GLMLANHT + +LF RSV  YD++RK NAF++ YRK+PMF D+LDEFD +R VV  +IDEYKA+ERPDY TW 
Sbjct:    1 MPREIITLQVGQCGNQIGSEFWKQLCVEHGISQDGIVQDFATAGNDRKDVFFYQADDEHYIPRALLLDLEPRVINSIMNSSYRNLYNPENHFIAKDGGGAGNNWASGYHQGEMHHDLLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLENLNDHFPKKLIQTYSVFPNQDDFQSDVVVQPYNSLLTLKRLVLNADCVVVLDNTALNRIAVDRLRIDNPTVSQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLTI-DAQVSAVRKTTVLDVMRRLLQPKNIMVSTSTKNGCYISILNIIQGDVDPTQVHKSLQRIRERKLARFIPWGPASIQVALSRKSPYVESAHKVNGLMLANHTSIGNLFHRSVVHYDRLRKHNAFIDQYRKQPMFADNLDEFDEARAVVTSMIDEYKASERPDYATWG 445          
BLAST of EWM29130.1 vs. NCBI_GenBank
Match: gi|1173946008|gb|OQR94579.1| (tubulin gamma chain [Achlya hypogyna])

HSP 1 Score: 793.112 bits (2047), Expect = 0.000e+0
Identity = 375/446 (84.08%), Postives = 404/446 (90.58%), Query Frame = 0
Query:    1 MPHEIITLQVGQCGNQIGSEFWKQICAEHGISPDGMLQDFATEGNDRKDVFFYQADDDHYIPRALLMDLEPRVINSILNSEYRSLYNQENVFMASNGGGAGNNWASGHRQAEEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPNWDQTQSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLRITNPTVNQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISDVQASAVRKTTVLDVMRRLTQTKNIMVSASTRTGCYISILNIIQGDVDPSQVHKALQRIRERKLVNFIPWGPASIQVALSRKSAYVETAHKVSGLMLANHTCMASLFQRSVNQYDKIRKRNAFVENYRKEPMFQDSLDEFDSSREVVQGLIDEYKAAERPDYITWA 446
            MP EIITLQVGQCGNQIGSEFWKQ+C EHGIS DG++QD+AT GNDRKDVFFYQADD+HYIPRALL+DLEPRVINSI+NS YR+LYN EN F+A +GGGAGNNWASG+ Q E HHD LMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLE LNDHFPKKLIQTYSVFPN D  QSDVVVQPYNSLLTLKRL LNADCVVVLDNTALNRIAVDRLRI NPTV+QLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPL I D Q SAVRKTTVLDVMRRL Q KNIMVS ST+ GCYISILNIIQGDVDP+QVHK+LQRIRERKL  FIPWGPASIQVALSRKS YVE+AHKV+GLMLANHT + +LF RSV  YD++RK NAF++ YRK+PMF DSLDEFD++REVV  +IDEYKA+ER DY +W 
Sbjct:    1 MPREIITLQVGQCGNQIGSEFWKQLCVEHGISQDGIVQDYATSGNDRKDVFFYQADDEHYIPRALLLDLEPRVINSIMNSSYRNLYNPENQFIAKDGGGAGNNWASGYHQGEAHHDLLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLENLNDHFPKKLIQTYSVFPNQDDFQSDVVVQPYNSLLTLKRLVLNADCVVVLDNTALNRIAVDRLRIDNPTVSQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLTI-DAQVSAVRKTTVLDVMRRLLQPKNIMVSTSTKNGCYISILNIIQGDVDPTQVHKSLQRIRERKLAKFIPWGPASIQVALSRKSPYVESAHKVNGLMLANHTSIGNLFHRSVVHYDRLRKHNAFIDQYRKQPMFSDSLDEFDNAREVVTSMIDEYKASERADYASWG 445          
BLAST of EWM29130.1 vs. NCBI_GenBank
Match: gi|325188135|emb|CCA22677.1| (tubulin gamma2 chain putative [Albugo laibachii Nc14])

HSP 1 Score: 793.112 bits (2047), Expect = 0.000e+0
Identity = 374/447 (83.67%), Postives = 404/447 (90.38%), Query Frame = 0
Query:    1 MPHEIITLQVGQCGNQIGSEFWKQICAEHGISPDGMLQDFATEGNDRKDVFFYQADDDHYIPRALLMDLEPRVINSILNSEYRSLYNQENVFMASNGGGAGNNWASGHRQAEEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPNWDQTQSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLRITNPTVNQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISDVQASAVRKTTVLDVMRRLTQTKNIMVSASTRTGCYISILNIIQGDVDPSQVHKALQRIRERKLVNFIPWGPASIQVALSRKSAYVETAHKVSGLMLANHTCMASLFQRSVNQYDKIRKRNAFVENYRKEPMFQDSLDEFDSSREVVQGLIDEYKAAERPDYITWAH 447
            MP EIITLQVGQCGNQIG EFWKQ+C EHGISPDG++ D+AT+G+DRKDVFFYQADD+HYIPRALLMDLEPRVINSILNS Y++LYN EN FM+  GGGAGNNWASG+ Q E+ HD LMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLE LNDHFPKKLIQTYSVFPN    QSDVVVQPYNSLLTLKRL LNADCVVVLDNTALNRIAVDRLRI NPTV QLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPL I + Q SAVRKT+VLDVMRRL Q KNIMVS ST+ GCYISILNIIQGDVDP+QVHK+LQRIRERKLV FIPWGPASIQVALSRKS YVETAHKVSGLMLANHT + SLF RS+ QYD+++K  AF++NY+K+PMF DSLDEFDS+REVVQ L+DEYKA+ER DY+ W  
Sbjct:    1 MPREIITLQVGQCGNQIGMEFWKQLCVEHGISPDGIVHDYATQGHDRKDVFFYQADDEHYIPRALLMDLEPRVINSILNSTYKNLYNPENFFMSKEGGGAGNNWASGYHQGEQQHDLLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLENLNDHFPKKLIQTYSVFPNQTDFQSDVVVQPYNSLLTLKRLVLNADCVVVLDNTALNRIAVDRLRIDNPTVAQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLTI-ETQVSAVRKTSVLDVMRRLLQPKNIMVSTSTKKGCYISILNIIQGDVDPTQVHKSLQRIRERKLVRFIPWGPASIQVALSRKSPYVETAHKVSGLMLANHTSIGSLFHRSLVQYDRLKKHGAFLDNYKKQPMFADSLDEFDSAREVVQNLVDEYKASERMDYVDWGQ 446          
BLAST of EWM29130.1 vs. NCBI_GenBank
Match: gi|635361868|emb|CCI10538.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 789.26 bits (2037), Expect = 0.000e+0
Identity = 373/446 (83.63%), Postives = 403/446 (90.36%), Query Frame = 0
Query:    1 MPHEIITLQVGQCGNQIGSEFWKQICAEHGISPDGMLQDFATEGNDRKDVFFYQADDDHYIPRALLMDLEPRVINSILNSEYRSLYNQENVFMASNGGGAGNNWASGHRQAEEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPNWDQTQSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLRITNPTVNQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISDVQASAVRKTTVLDVMRRLTQTKNIMVSASTRTGCYISILNIIQGDVDPSQVHKALQRIRERKLVNFIPWGPASIQVALSRKSAYVETAHKVSGLMLANHTCMASLFQRSVNQYDKIRKRNAFVENYRKEPMFQDSLDEFDSSREVVQGLIDEYKAAERPDYITWA 446
            MP EIITLQVGQCGNQIG EFWKQ+C EHGISPDG++ D+AT+G+DRKDVFFYQADD+HYIPRALLMDLEPRVINSILNS Y++LYN EN FM+  GGGAGNNWASG+ Q E+ HD LMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLE LNDHFPKKLIQTYSVFPN    QSDVVVQPYNSLLTLKRL LNADCVVVLDNTALNRIA DRLRI NPTV QLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPL I + Q SAVRKT+VLDVMRRL Q KNIMVS ST+ GCYISILNIIQGDVDP+QVHK+LQRIRERKLV FIPWGPASIQVALSRKS YVETAHKVSGLMLANHT + SLF RS+ QYD+++K  AF++NY+K+PMF DSLDEFDS+REVVQ L+DEYKA+ER DY+ W 
Sbjct:    1 MPREIITLQVGQCGNQIGMEFWKQLCVEHGISPDGIVHDYATQGHDRKDVFFYQADDEHYIPRALLMDLEPRVINSILNSTYKNLYNPENFFMSKEGGGAGNNWASGYHQGEQQHDLLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLENLNDHFPKKLIQTYSVFPNQTDFQSDVVVQPYNSLLTLKRLVLNADCVVVLDNTALNRIASDRLRIDNPTVAQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLTI-ETQVSAVRKTSVLDVMRRLLQPKNIMVSTSTKKGCYISILNIIQGDVDPTQVHKSLQRIRERKLVRFIPWGPASIQVALSRKSPYVETAHKVSGLMLANHTSIGSLFHRSLVQYDRLKKHGAFLDNYKKQPMFADSLDEFDSAREVVQNLVDEYKASERMDYVDWG 445          
BLAST of EWM29130.1 vs. NCBI_GenBank
Match: gi|669148774|ref|XP_008609949.1| (tubulin gamma chain [Saprolegnia diclina VS20] >gi|530738286|gb|EQC36528.1| tubulin gamma chain [Saprolegnia diclina VS20])

HSP 1 Score: 787.719 bits (2033), Expect = 0.000e+0
Identity = 372/448 (83.04%), Postives = 403/448 (89.96%), Query Frame = 0
Query:    1 MPHEIITLQVGQCGNQIGSEFWKQICAEHGISPDGMLQDFATEGNDRKDVFFYQADDDHYIPRALLMDLEPRVINSILNSEYRSLYNQENVFMASNGGGAGNNWASGHRQAEEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPNWDQTQSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLRITNPTVNQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISDVQASAVRKTTVLDVMRRLTQTKNIMVSASTRTGCYISILNIIQGDVDPSQVHKALQRIRERKLVNFIPWGPASIQVALSRKSAYVETAHKVSGLMLANHTCMASLFQRSVNQYDKIRKRNAFVENYRKEPMFQDSLDEFDSSREVVQGLIDEYKAAERPDYITWAHG 448
            MP EIITLQVGQCGNQIGSEFWKQ+C EHGIS DG++QD+AT GNDRKDVFFYQADD+HYIPRALL+DLEPRVINSI+NS YR+LYN EN F+A +GGGAGNNWASG+ Q E HHD LMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLE LNDHFPKKLIQTYSVFPN D  QSDVVVQPYNSLLTLKRL LNADCVVVLDNTALNRIAVDRLRI NPTV+QLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPL I D Q SAVRKTTVLDVMRRL Q KNIMVS ST+ GCYISILNIIQGDVDP+QVHK+LQRIRERKL  FIPWGPASIQVALSRKS YVE+AHKV+GLMLANHT + +LF RSV  YD++RK NAF++ YRK+PMF + L+EFD++REVV  +IDEYKA+ER DY +W   
Sbjct:    1 MPREIITLQVGQCGNQIGSEFWKQLCVEHGISQDGIVQDYATAGNDRKDVFFYQADDEHYIPRALLLDLEPRVINSIMNSSYRNLYNPENQFIAKDGGGAGNNWASGYHQGEAHHDLLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLENLNDHFPKKLIQTYSVFPNQDDFQSDVVVQPYNSLLTLKRLVLNADCVVVLDNTALNRIAVDRLRIDNPTVSQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLTI-DAQVSAVRKTTVLDVMRRLLQPKNIMVSTSTKNGCYISILNIIQGDVDPTQVHKSLQRIRERKLAKFIPWGPASIQVALSRKSPYVESAHKVNGLMLANHTSIGNLFHRSVVHYDRLRKHNAFIDQYRKQPMFAEGLEEFDNAREVVTNMIDEYKASERADYASWGQA 447          
BLAST of EWM29130.1 vs. NCBI_GenBank
Match: gi|1214684077|gb|OWZ01681.1| (Tubulin gamma chain [Phytophthora megakarya])

HSP 1 Score: 786.178 bits (2029), Expect = 0.000e+0
Identity = 370/447 (82.77%), Postives = 401/447 (89.71%), Query Frame = 0
Query:    1 MPHEIITLQVGQCGNQIGSEFWKQICAEHGISPDGMLQDFATEGNDRKDVFFYQADDDHYIPRALLMDLEPRVINSILNSEYRSLYNQENVFMASNGGGAGNNWASGHRQAEEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDHFPKKLIQTYSVFPNWDQTQSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLRITNPTVNQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLVISDVQASAVRKTTVLDVMRRLTQTKNIMVSASTRTGCYISILNIIQGDVDPSQVHKALQRIRERKLVNFIPWGPASIQVALSRKSAYVETAHKVSGLMLANHTCMASLFQRSVNQYDKIRKRNAFVENYRKEPMFQDSLDEFDSSREVVQGLIDEYKAAERPDYITWAH 447
            MP EIITLQ GQCGNQIG EFWKQ+C EHGIS DG++QDFAT GNDRKDVFFYQADD+HYIPRALLMDLEPRVINSI  S +R+LYN EN F++  GGGAGNNWASG+ Q EEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLE LNDHFPKKLIQTYSVFPN    QSDVVVQPYNSLLT+KRL LNAD VVVLDNTALNRIAV+RLR+ NPTV+QLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPL I D Q SAVRKTTVLDVMRRL Q KNIMVS ST+TGCYISILNIIQGDVDP+QVHK+LQRIRERKL  FIPWGPASIQVALSRKS Y+ETAHKV+GLMLANHT + +LF + + QYD+++K  AF+ENYRKEPMF ++LDEFDS+REVVQ L+DEYKA+ER DY TW  
Sbjct:    1 MPREIITLQAGQCGNQIGMEFWKQLCVEHGISEDGIVQDFATSGNDRKDVFFYQADDEHYIPRALLMDLEPRVINSISTSTFRNLYNPENFFVSKEGGGAGNNWASGYHQGEEHHDQLMEMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLENLNDHFPKKLIQTYSVFPNQSDFQSDVVVQPYNSLLTMKRLVLNADSVVVLDNTALNRIAVERLRVENPTVSQLNSLVSTVMAASTTTLRYPGYMNNDLIGLVASLIPTPRCHFLMTGYTPLTI-DAQVSAVRKTTVLDVMRRLLQPKNIMVSTSTKTGCYISILNIIQGDVDPTQVHKSLQRIRERKLARFIPWGPASIQVALSRKSPYMETAHKVNGLMLANHTSIGALFHKLLLQYDRLKKHGAFIENYRKEPMFAENLDEFDSAREVVQNLVDEYKASERADYATWGQ 446          
The following BLAST results are available for this feature:
BLAST of EWM29130.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111650|gb|EWM29130.1|0.000e+0100.00tubulin gamma-1 chain [Nannochloropsis gaditana][more]
gi|298706731|emb|CBJ29680.1|0.000e+085.87gamma tubulin [Ectocarpus siliculosus][more]
gi|698797614|ref|XP_009831836.1|0.000e+084.12tubulin gamma chain [Aphanomyces astaci] >gi|57411... [more]
gi|673035578|ref|XP_008871750.1|0.000e+083.89tubulin gamma chain [Aphanomyces invadans] >gi|574... [more]
gi|1173928458|gb|OQR82043.1|0.000e+084.30tubulin gamma chain [Thraustotheca clavata][more]
gi|1173946008|gb|OQR94579.1|0.000e+084.08tubulin gamma chain [Achlya hypogyna][more]
gi|325188135|emb|CCA22677.1|0.000e+083.67tubulin gamma2 chain putative [Albugo laibachii Nc... [more]
gi|635361868|emb|CCI10538.1|0.000e+083.63unnamed protein product [Albugo candida][more]
gi|669148774|ref|XP_008609949.1|0.000e+083.04tubulin gamma chain [Saprolegnia diclina VS20] >gi... [more]
gi|1214684077|gb|OWZ01681.1|0.000e+082.77Tubulin gamma chain [Phytophthora megakarya][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1461rna1461Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications